feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 1356 1430 -1 75 LSC 0.000000 0 0 3 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 1431 1698 0 268 LSC 0.120301 32 2 78 18 no 1.000000 2 1.000000 NA 0.992537 74.600000 psbA gene psbA psbA 1699 2757 -1 1059 LSC 0.016997 18 0 5 46 no 1.000000 2 1.000000 NA 1.000000 53.900000 IGS_002 igs psbA|matK psbA-matK 2758 3244 0 487 LSC 0.091476 44 6 71 15 no 1.000000 2 1.000000 NA 0.987680 77.500000 matK gene matK matK 3245 4822 -1 1578 LSC 0.038462 60 18 7 3 no 1.000000 2 1.000000 NA 0.988593 67.000000 IGS_003 igs matK|trnQ-UUG matK-trnQ-UUG 4823 8940 0 4118 LSC 0.140933 544 258 4 8 yes 1.000000 2 1.000000 NA 0.937348 78.700000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 8941 9015 -1 75 LSC 0.083333 6 3 47 3 no 1.000000 2 1.000000 NA 0.960000 74.100000 IGS_004 igs trnQ-UUG|psbK trnQ-UUG-psbK 9016 9236 0 221 LSC 0.102326 22 6 12 8 no 1.000000 2 1.000000 NA 0.972851 75.700000 psbK gene psbK psbK 9237 9533 1 297 LSC 0.020548 6 5 2 9 no 1.000000 2 1.000000 NA 0.983165 51.100000 IGS_005 igs psbK|psbI psbK-psbI 9534 9886 0 353 LSC 0.084986 30 0 128 15 no 1.000000 2 1.000000 NA 1.000000 72.900000 psbI gene psbI psbI 9887 9997 1 111 LSC 0.018018 2 0 26 7 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_006 igs psbI|trnS-GCU psbI-trnS-GCU 9998 10111 0 114 LSC 0.061404 7 0 93 30 no 1.000000 2 1.000000 NA 1.000000 69.900000 trnS-GCU tRNA trnS-GCU trnS-GCU 10112 10199 -1 88 LSC 0.011364 1 0 20 108 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_007 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 10200 11954 0 1755 LSC 0.046416 79 53 57 86 no 1.000000 2 1.000000 NA 0.969801 76.900000 trnR-UCU tRNA trnR-UCU trnR-UCU 11955 12026 1 72 LSC 0.000000 0 0 21 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_008 igs trnR-UCU|atpA trnR-UCU-atpA 12027 12125 0 99 LSC 0.050505 5 0 93 19 no 1.000000 2 1.000000 NA 1.000000 67.700000 atpA gene atpA atpA 12126 13649 -1 1524 LSC 0.016404 25 0 1 11 no 1.000000 2 1.000000 NA 1.000000 53.200000 IGS_009 igs atpA|atpF atpA-atpF 13650 13698 0 49 LSC 0.061224 3 0 4 10 no 1.000000 2 1.000000 NA 1.000000 68.000000 atpF gene atpF atpF 13699 14887 -1 1189 LSC 0.036195 43 1 26 60 no 1.000000 2 1.000000 NA 0.999159 66.600000 IGS_010 igs atpF|atpH atpF-atpH 14888 15289 0 402 LSC 0.047264 19 0 15 125 no 1.000000 2 1.000000 NA 1.000000 67.900000 atpH gene atpH atpH 15290 15535 -1 246 LSC 0.020325 5 0 1 2 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_011 igs atpH|atpI atpH-atpI 15536 16762 0 1227 LSC 0.471204 450 272 41 1 yes 1.000000 2 1.000000 NA 0.778321 78.800000 atpI gene atpI atpI 16763 17557 -1 795 LSC 0.112102 88 10 0 4 no 1.000000 2 1.000000 NA 0.987421 80.000000 IGS_012 igs atpI|rps2 atpI-rps2 17558 17733 0 176 LSC 0.329341 55 9 25 16 no 1.000000 2 1.000000 NA 0.948864 78.500000 rps2 gene rps2 rps2 17734 18489 -1 756 LSC 0.060811 45 16 10 20 no 1.000000 2 1.000000 NA 0.978836 76.500000 IGS_013 igs rps2|rpoC2 rps2-rpoC2 18490 18694 0 205 LSC 0.081218 16 8 2 30 no 1.000000 2 1.000000 NA 0.960976 73.700000 rpoC2 gene rpoC2 rpoC2 18695 22966 -1 4272 LSC 0.039090 165 51 4 59 no 1.000000 2 1.000000 NA 0.988062 62.500000 IGS_014 igs rpoC2|rpoC1 rpoC2-rpoC1 22967 23021 0 55 LSC 0.000000 0 0 1 4 no 0.000000 1 0.000000 NA 1.000000 18.800000 rpoC1 gene rpoC1 rpoC1 23022 25408 -1 2387 LSC 0.076404 181 18 56 88 no 1.000000 2 1.000000 NA 0.992459 78.800000 IGS_015 igs rpoC1|rpoB rpoC1-rpoB 25409 25569 0 161 LSC 0.012422 2 0 17 64 no 1.000000 2 1.000000 NA 1.000000 45.900000 rpoB gene rpoB rpoB 25570 29271 -1 3702 LSC 0.037297 138 2 35 10 no 1.000000 2 1.000000 NA 0.999460 61.800000 IGS_016 igs rpoB|trnC-GCA rpoB-trnC-GCA 29272 30398 0 1127 LSC 0.058182 64 27 16 85 no 1.000000 2 1.000000 NA 0.976043 76.900000 trnC-GCA tRNA trnC-GCA trnC-GCA 30399 30479 1 81 LSC 0.000000 0 0 20 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_017 igs trnC-GCA|petN trnC-GCA-petN 30480 31209 0 730 LSC 0.077348 56 6 101 6 no 1.000000 2 1.000000 NA 0.991781 77.100000 petN gene petN petN 31210 31380 1 171 LSC 0.029240 5 0 19 67 no 1.000000 2 1.000000 NA 1.000000 55.700000 IGS_018 igs petN|psbM petN-psbM 31381 32285 0 905 LSC 0.084555 75 18 3 1 no 1.000000 2 1.000000 NA 0.980110 78.600000 psbM gene psbM psbM 32286 32390 -1 105 LSC 0.028571 3 0 24 16 no 1.000000 2 1.000000 NA 1.000000 55.100000 IGS_019 igs psbM|trnD-GUC psbM-trnD-GUC 32391 32995 0 605 LSC 0.051546 30 23 65 80 yes 1.000000 2 1.000000 NA 0.961983 81.000000 trnD-GUC tRNA trnD-GUC trnD-GUC 32996 33069 -1 74 LSC 0.000000 0 0 8 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_020 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 33070 33173 0 104 LSC 0.054348 5 12 82 0 no 1.000000 2 1.000000 NA 0.884615 69.000000 trnY-GUA tRNA trnY-GUA trnY-GUA 33174 33257 -1 84 LSC 0.011905 1 0 26 10 no 1.000000 2 1.000000 NA 1.000000 45.100000 IGS_021 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 33258 33316 0 59 LSC 0.033898 2 0 83 187 no 1.000000 2 1.000000 NA 1.000000 63.200000 trnE-UUC tRNA trnE-UUC trnE-UUC 33317 33389 -1 73 LSC 0.000000 0 0 42 114 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_022 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 33390 33693 0 304 LSC 0.064626 19 10 115 81 no 1.000000 2 1.000000 NA 0.967105 77.200000 trnT-GGU tRNA trnT-GGU trnT-GGU 33694 33765 1 72 LSC 0.000000 0 0 21 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 trnM-CAU tRNA trnM-CAU trnM-CAU 33700 33758 1 59 LSC 0.000000 0 0 27 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_024 igs trnM-CAU|psbD trnM-CAU-psbD 33759 34620 0 862 LSC 0.060714 51 22 86 35 no 1.000000 2 1.000000 NA 0.974478 78.700000 psbD gene psbD psbD 34621 35700 1 1080 LSC 0.010185 11 0 2 35 no 1.000000 2 1.000000 NA 1.000000 49.800000 psbC gene psbC psbC 35648 37069 1 1422 LSC 0.017581 25 0 94 61 no 1.000000 2 1.000000 NA 1.000000 58.400000 IGS_026 igs psbC|trnS-UGA psbC-trnS-UGA 37070 37295 0 226 LSC 0.022727 5 6 107 35 no 1.000000 2 1.000000 NA 0.973451 55.700000 trnS-UGA tRNA trnS-UGA trnS-UGA 37296 37383 -1 88 LSC 0.011364 1 0 110 8 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_027 igs trnS-UGA|psbZ trnS-UGA-psbZ 37384 37651 0 268 LSC 0.074627 20 0 52 28 no 1.000000 2 1.000000 NA 1.000000 71.400000 psbZ gene psbZ psbZ 37652 37897 1 246 LSC 0.016529 4 4 8 43 no 1.000000 2 1.000000 NA 0.983740 49.100000 IGS_028 igs psbZ|trnG-UCC psbZ-trnG-UCC 37898 38171 0 274 LSC 0.118959 32 5 108 18 no 1.000000 2 1.000000 NA 0.981752 75.600000 trnG-UCC tRNA trnG-UCC trnG-UCC 38172 38242 1 71 LSC 0.014085 1 0 35 11 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_029 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 38243 38403 0 161 LSC 0.070064 11 4 52 1 no 1.000000 2 1.000000 NA 0.975155 71.000000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 38404 38477 -1 74 LSC 0.095890 7 1 5 38 no 1.000000 2 1.000000 NA 0.986486 73.500000 IGS_030 igs trnfM-CAU|rps14 trnfM-CAU-rps14 38478 38627 0 150 LSC 0.089286 10 38 16 9 no 1.000000 2 1.000000 NA 0.746667 68.100000 rps14 gene rps14 rps14 38628 38930 -1 303 LSC 0.023102 7 0 5 57 no 1.000000 2 1.000000 NA 1.000000 51.200000 IGS_031 igs rps14|psaB rps14-psaB 38931 39047 0 117 LSC 0.051282 6 0 116 63 no 1.000000 2 1.000000 NA 1.000000 71.100000 psaB gene psaB psaB 39048 41264 -1 2217 LSC 0.013983 31 0 11 24 no 1.000000 2 1.000000 NA 1.000000 51.100000 IGS_032 igs psaB|psaA psaB-psaA 41265 41277 0 13 LSC 0.000000 0 0 118 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 psaA gene psaA psaA 41278 43578 -1 2301 LSC 0.021730 50 0 131 15 no 1.000000 2 1.000000 NA 1.000000 55.700000 IGS_033 igs psaA|ycf3 psaA-ycf3 43579 44365 0 787 LSC 0.048429 37 23 71 60 no 1.000000 2 1.000000 NA 0.970775 78.800000 ycf3 gene ycf3 ycf3 44366 46971 -1 2606 LSC 0.040031 104 8 8 17 no 1.000000 2 1.000000 NA 0.996930 65.300000 IGS_034 igs ycf3|trnS-GGA ycf3-trnS-GGA 46972 47203 0 232 LSC 0.048673 11 6 16 95 no 1.000000 2 1.000000 NA 0.974138 69.000000 trnS-GGA tRNA trnS-GGA trnS-GGA 47204 47290 1 87 LSC 0.000000 0 0 59 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_035 igs trnS-GGA|trnT-UGU trnS-GGA-trnT-UGU 47291 48530 0 1240 LSC 0.062092 76 16 146 82 yes 1.000000 2 1.000000 NA 0.987097 81.300000 trnT-UGU tRNA trnT-UGU trnT-UGU 48531 48603 -1 73 LSC 0.000000 0 0 13 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_036 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 48604 49378 0 775 LSC 0.070461 52 37 86 248 yes 1.000000 2 1.000000 NA 0.952258 85.700000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 49379 49415 1 37 LSC 0.000000 0 0 37 211 no 0.000000 1 0.000000 NA 1.000000 21.500000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 49896 49945 1 50 LSC 0.020000 1 0 13 9 no 1.000000 2 1.000000 NA 1.000000 49.700000 IGS_039 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 49946 50278 0 333 LSC 0.083591 27 10 33 16 no 1.000000 2 1.000000 NA 0.969970 74.900000 trnF-GAA tRNA trnF-GAA trnF-GAA 50279 50351 1 73 LSC 0.013699 1 0 4 4 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_040 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 50352 51064 0 713 LSC 0.071629 51 1 56 5 no 1.000000 2 1.000000 NA 0.998597 75.700000 ndhJ gene ndhJ ndhJ 51065 51559 -1 495 LSC 0.030303 15 0 16 3 no 1.000000 2 1.000000 NA 1.000000 59.200000 IGS_041 igs ndhJ|ndhK ndhJ-ndhK 51560 51737 0 178 LSC 0.061728 10 16 28 0 no 1.000000 2 1.000000 NA 0.910112 70.700000 ndhK gene ndhK ndhK 51738 52487 -1 750 LSC 0.033422 25 2 2 128 no 1.000000 2 1.000000 NA 0.997333 63.400000 ndhC gene ndhC ndhC 52367 52729 -1 363 LSC 0.016529 6 0 37 3 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_043 igs ndhC|trnV-UAC ndhC-trnV-UAC 52730 53889 0 1160 LSC 0.075924 76 159 24 47 no 1.000000 2 1.000000 NA 0.862931 78.600000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 53890 53926 -1 37 LSC 0.000000 0 0 0 10 no 0.000000 1 0.000000 NA 1.000000 18.800000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 54506 54543 -1 38 LSC 0.000000 0 0 78 0 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_046 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 54544 54714 0 171 LSC 0.041916 7 4 116 90 no 1.000000 2 1.000000 NA 0.976608 70.500000 trnM-CAU tRNA trnM-CAU trnM-CAU 54715 54786 1 72 LSC 0.000000 0 0 0 18 no 0.000000 1 0.000000 NA 1.000000 18.800000 trnT-GGU tRNA trnT-GGU trnT-GGU 54720 54778 1 59 LSC 0.000000 0 0 5 26 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_048 igs trnT-GGU|atpE trnT-GGU-atpE 54779 54977 0 199 LSC 0.063158 12 9 64 3 no 1.000000 2 1.000000 NA 0.954774 72.100000 atpE gene atpE atpE 54978 55379 -1 402 LSC 0.014925 6 0 1 43 no 1.000000 2 1.000000 NA 1.000000 48.300000 atpB gene atpB atpB 55376 56890 -1 1515 LSC 0.020543 31 6 127 6 no 1.000000 2 1.000000 NA 0.996040 56.400000 IGS_050 igs atpB|rbcL atpB-rbcL 56891 57724 0 834 LSC 0.112713 86 71 2 3 yes 1.000000 2 1.000000 NA 0.914868 82.800000 rbcL gene rbcL rbcL 57725 59203 1 1479 LSC 0.017579 26 0 5 5 no 1.000000 2 1.000000 NA 1.000000 54.200000 IGS_051 igs rbcL|psaI rbcL-psaI 59204 61895 0 2692 LSC 0.419769 981 355 36 11 yes 1.000000 2 1.000000 NA 0.868128 79.600000 psaI gene psaI psaI 61896 62006 1 111 LSC 0.162162 18 0 5 20 no 1.000000 2 1.000000 NA 1.000000 72.900000 IGS_052 igs psaI|ycf4 psaI-ycf4 62007 62549 0 543 LSC 0.146552 68 79 5 23 no 1.000000 2 1.000000 NA 0.854512 80.100000 ycf4 gene ycf4 ycf4 62550 63104 1 555 LSC 0.036036 20 0 8 0 no 1.000000 2 1.000000 NA 1.000000 63.500000 IGS_053 igs ycf4|cemA ycf4-cemA 63105 64044 0 940 LSC 0.115654 99 84 141 40 yes 1.000000 2 1.000000 NA 0.910638 85.500000 cemA gene cemA cemA 64045 64734 1 690 LSC 0.027536 19 0 59 23 no 1.000000 2 1.000000 NA 1.000000 61.300000 IGS_054 igs cemA|petA cemA-petA 64735 64942 0 208 LSC 0.054187 11 5 0 14 no 1.000000 2 1.000000 NA 0.975962 68.900000 petA gene petA petA 64943 65905 1 963 LSC 0.019730 19 0 11 13 no 1.000000 2 1.000000 NA 1.000000 55.900000 IGS_055 igs petA|psbJ petA-psbJ 65906 66978 0 1073 LSC 0.089641 90 69 20 18 yes 1.000000 2 1.000000 NA 0.935694 82.500000 psbJ gene psbJ psbJ 66979 67101 -1 123 LSC 0.032520 4 0 0 11 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_056 igs psbJ|psbL psbJ-psbL 67102 67154 0 53 LSC 0.037736 2 0 46 56 no 1.000000 2 1.000000 NA 1.000000 62.600000 psbL gene psbL psbL 67155 67295 -1 141 LSC 0.035461 5 0 12 5 no 1.000000 2 1.000000 NA 1.000000 58.300000 IGS_057 igs psbL|psbF psbL-psbF 67296 67374 0 79 LSC 0.037975 3 0 0 96 no 1.000000 2 1.000000 NA 1.000000 59.300000 psbF gene psbF psbF 67375 67494 -1 120 LSC 0.016667 2 0 3 43 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_058 igs psbF|psbE psbF-psbE 67495 67508 0 14 LSC 0.000000 0 0 6 29 no 0.000000 1 0.000000 NA 1.000000 19.200000 psbE gene psbE psbE 67509 67790 -1 282 LSC 0.014184 4 0 20 42 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_059 igs psbE|petL psbE-petL 67791 68556 0 766 LSC 0.039841 30 13 83 12 no 1.000000 2 1.000000 NA 0.983029 69.100000 petL gene petL petL 68557 68775 1 219 LSC 0.041096 9 0 32 43 no 1.000000 2 1.000000 NA 1.000000 63.500000 IGS_060 igs petL|petG petL-petG 68776 68945 0 170 LSC 0.018182 3 5 86 80 no 1.000000 2 1.000000 NA 0.970588 56.700000 petG gene petG petG 68946 69065 1 120 LSC 0.016667 2 0 87 6 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_061 igs petG|trnW-CCA petG-trnW-CCA 69066 69186 0 121 LSC 0.033058 4 0 27 90 no 1.000000 2 1.000000 NA 1.000000 58.500000 trnW-CCA tRNA trnW-CCA trnW-CCA 69187 69260 -1 74 LSC 0.000000 0 0 79 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_062 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 69261 69414 0 154 LSC 0.055556 8 10 153 80 no 1.000000 2 1.000000 NA 0.935065 76.900000 trnP-UGG tRNA trnP-UGG trnP-UGG 69415 69488 -1 74 LSC 0.000000 0 0 6 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 trnP-GGG tRNA trnP-GGG trnP-GGG 69417 69487 -1 71 LSC 0.000000 0 0 8 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_064 igs trnP-GGG|psaJ trnP-GGG-psaJ 69488 69882 0 395 LSC 0.057221 21 28 79 38 no 1.000000 2 1.000000 NA 0.929114 75.700000 psaJ gene psaJ psaJ 69883 70017 1 135 LSC 0.029630 4 0 19 49 no 1.000000 2 1.000000 NA 1.000000 56.000000 IGS_065 igs psaJ|rpl33 psaJ-rpl33 70018 70552 0 535 LSC 0.042389 22 16 48 10 no 1.000000 2 1.000000 NA 0.970093 70.300000 rpl33 gene rpl33 rpl33 70553 70753 1 201 LSC 0.034826 7 0 18 12 no 1.000000 2 1.000000 NA 1.000000 58.400000 IGS_066 igs rpl33|rps18 rpl33-rps18 70754 70950 0 197 LSC 0.184211 35 7 8 5 no 1.000000 2 1.000000 NA 0.964467 76.300000 rps18 gene rps18 rps18 70951 71256 1 306 LSC 0.143333 43 6 38 13 no 1.000000 2 1.000000 NA 0.980392 75.500000 IGS_067 igs rps18|rpl20 rps18-rpl20 71257 71527 0 271 LSC 0.051852 14 1 4 23 no 1.000000 2 1.000000 NA 0.996310 67.100000 rpl20 gene rpl20 rpl20 71528 71788 -1 261 LSC 0.042146 11 0 4 14 no 1.000000 2 1.000000 NA 1.000000 62.000000 IGS_068 igs rpl20|rps12 rpl20-rps12 71789 72842 0 1054 LSC 0.172450 164 103 30 39 yes 1.000000 2 1.000000 NA 0.902277 84.500000 rps12_part1 gene rps12 rps12 72843 72956 -1 114 LSC 0.061404 7 0 61 20 no 1.000000 2 1.000000 NA 1.000000 69.200000 IGS_069 igs rps12|psbB rps12-psbB 72957 75705 0 2749 LSC 0.264242 603 467 8 53 no 1.000000 2 1.000000 NA 0.830120 78.200000 psbB gene psbB psbB 75706 77223 1 1518 LSC 0.045455 69 0 36 84 no 1.000000 2 1.000000 NA 1.000000 72.500000 IGS_070 igs psbB|psbT psbB-psbT 77224 77407 0 184 LSC 0.044248 5 71 0 7 no 1.000000 2 1.000000 NA 0.614130 56.200000 psbT gene psbT psbT 77408 77509 1 102 LSC 0.029412 3 0 56 32 no 1.000000 2 1.000000 NA 1.000000 56.800000 IGS_071 igs psbT|psbN psbT-psbN 77510 77574 0 65 LSC 0.131148 8 4 41 45 no 1.000000 2 1.000000 NA 0.938462 80.100000 psbN gene psbN psbN 77575 77706 -1 132 LSC 0.038168 5 1 7 38 no 1.000000 2 1.000000 NA 0.992424 60.700000 IGS_072 igs psbN|psbH psbN-psbH 77707 77793 0 87 LSC 0.114943 10 0 18 7 no 1.000000 2 1.000000 NA 1.000000 73.000000 psbH gene psbH psbH 77794 78033 1 240 LSC 0.025000 6 0 1 21 no 1.000000 2 1.000000 NA 1.000000 51.900000 IGS_073 igs psbH|petD psbH-petD 78034 80463 0 2430 LSC 0.041219 96 101 20 62 no 1.000000 2 1.000000 NA 0.958436 70.800000 petD gene petD petD 80464 80988 1 525 LSC 0.017143 9 0 3 27 no 1.000000 2 1.000000 NA 1.000000 52.300000 IGS_074 igs petD|rps11 petD-rps11 80989 82404 0 1416 LSC 0.040258 50 174 21 5 no 1.000000 2 1.000000 NA 0.877119 69.400000 rps11 gene rps11 rps11 82405 82845 -1 441 LSC 0.056689 25 0 10 32 no 1.000000 2 1.000000 NA 1.000000 70.800000 IGS_075 igs rps11|rpl36 rps11-rpl36 82846 82930 0 85 LSC 0.117647 10 0 14 31 no 1.000000 2 1.000000 NA 1.000000 73.600000 rpl36 gene rpl36 rpl36 82931 83053 -1 123 LSC 0.032520 4 0 7 15 no 1.000000 2 1.000000 NA 1.000000 56.700000 IGS_076 igs rpl36|infA rpl36-infA 83054 83141 0 88 LSC 0.090909 8 0 5 22 no 1.000000 2 1.000000 NA 1.000000 71.700000 infA gene infA infA 83142 83420 -1 279 LSC 0.161417 41 25 10 1 no 1.000000 2 1.000000 NA 0.910394 76.300000 IGS_077 igs infA|rps8 infA-rps8 83421 83534 0 114 LSC 0.070175 8 0 9 39 no 1.000000 2 1.000000 NA 1.000000 69.400000 rps8 gene rps8 rps8 83535 83924 -1 390 LSC 0.041026 16 0 46 15 no 1.000000 2 1.000000 NA 1.000000 64.100000 IGS_078 igs rps8|rpl14 rps8-rpl14 83925 84075 0 151 LSC 0.073826 11 2 29 41 no 1.000000 2 1.000000 NA 0.986755 72.600000 rpl14 gene rpl14 rpl14 84076 84588 -1 513 LSC 0.029412 15 3 5 2 no 1.000000 2 1.000000 NA 0.994152 59.500000 IGS_079 igs rpl14|rps3 rpl14-rps3 84589 86024 0 1436 LSC 0.054455 77 22 9 51 no 1.000000 2 1.000000 NA 0.984680 75.100000 rps3 gene rps3 rps3 86025 86687 -1 663 LSC 0.054299 36 0 1 2 no 1.000000 2 1.000000 NA 1.000000 73.100000 rpl22 gene rpl22 rpl22 86672 87130 -1 459 LSC 0.087146 40 0 44 0 no 1.000000 2 1.000000 NA 1.000000 74.200000 IGS_081 igs rpl22|rps19 rpl22-rps19 87131 87195 0 65 LSC 0.107692 7 0 0 16 no 1.000000 2 1.000000 NA 1.000000 72.500000 rps19 gene rps19 rps19 87196 87474 -1 279 IRb 0.103943 29 0 1 15 no 1.000000 2 1.000000 NA 1.000000 72.600000 IGS_082 igs rps19|rpl2 rps19-rpl2 87475 87543 0 69 IRb 0.031746 2 6 10 5 no 1.000000 2 1.000000 NA 0.913043 59.600000 rpl2 gene rpl2 rpl2 87544 89107 -1 1564 IRb 0.035526 54 44 50 4 no 1.000000 2 1.000000 NA 0.971867 66.900000 IGS_083 igs rpl2|rpl23 rpl2-rpl23 89108 89125 0 18 IRb 0.055556 1 0 51 54 no 1.000000 2 1.000000 NA 1.000000 70.800000 rpl23 gene rpl23 rpl23 89126 89254 -1 129 IRb 0.050420 6 10 13 29 no 1.000000 2 1.000000 NA 0.922481 70.900000 IGS_084 igs rpl23|trnI-CAU rpl23-trnI-CAU 89255 89678 0 424 IRb 0.110803 40 63 1 78 no 1.000000 2 1.000000 NA 0.851415 76.500000 trnI-CAU tRNA trnI-CAU trnI-CAU 89679 89748 -1 70 IRb 0.000000 0 0 11 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_085 igs trnI-CAU|ycf2 trnI-CAU-ycf2 89749 90841 0 1093 IRb 0.049470 42 244 81 33 no 1.000000 2 1.000000 NA 0.776761 73.300000 ycf2 gene ycf2 ycf2 90842 93544 1 2703 IRb 0.068886 180 90 154 20 no 1.000000 2 1.000000 NA 0.966704 76.800000 IGS_086 igs ycf2|ycf15 ycf2-ycf15 93545 96109 0 2565 IRb 0.107366 258 162 1 0 no 1.000000 2 1.000000 NA 0.936842 81.000000 ycf15 gene ycf15 ycf15 96110 96562 1 453 IRb 0.062069 27 18 1 62 no 1.000000 2 1.000000 NA 0.960265 74.600000 IGS_087 igs ycf15|trnL-CAA ycf15-trnL-CAA 96563 97269 0 707 IRb 0.099200 62 82 10 137 no 1.000000 2 1.000000 NA 0.884017 80.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 97270 97346 -1 77 IRb 0.000000 0 0 22 60 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_088 igs trnL-CAA|ndhB trnL-CAA-ndhB 97347 97868 0 522 IRb 0.025292 13 8 99 111 no 1.000000 2 1.000000 NA 0.984674 65.500000 ndhB gene ndhB ndhB 97869 100070 -1 2202 IRb 0.012739 28 4 8 11 no 1.000000 2 1.000000 NA 0.998183 50.400000 IGS_089 igs ndhB|rps7 ndhB-rps7 100071 100234 0 164 IRb 0.012195 2 0 160 34 no 1.000000 2 1.000000 NA 1.000000 47.100000 rps7 gene rps7 rps7 100235 100939 -1 705 IRb 0.053111 35 46 139 36 no 1.000000 2 1.000000 NA 0.934752 79.600000 IGS_090 igs rps7|trnV-GAC rps7-trnV-GAC 100940 103275 0 2336 IRb 0.029878 66 127 70 22 no 1.000000 2 1.000000 NA 0.945634 65.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 103276 103343 1 68 IRb 0.014706 1 0 23 11 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_091 igs trnV-GAC|rrn16 trnV-GAC-rrn16 103344 103559 0 216 IRb 0.055556 12 0 45 209 no 1.000000 2 1.000000 NA 1.000000 70.300000 rrn16 rRNA rrn16 rrn16 103560 105044 1 1485 IRb 0.015488 23 0 65 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_092 igs rrn16|trnI-GAU rrn16-trnI-GAU 105045 105281 0 237 IRb 0.000000 0 62 6 300 no 1.000000 2 1.000000 NA 0.738397 36.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 105282 105321 1 40 IRb NA 0 40 243 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 106246 106282 1 37 IRb 0.000000 0 0 120 300 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_095 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 106283 106342 0 60 IRb 0.000000 0 0 157 300 no 0.000000 1 0.000000 NA 1.000000 30.500000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 106343 106382 1 40 IRb 0.000000 0 0 217 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 107195 107227 1 33 IRb 0.030303 1 0 143 21 no 1.000000 2 1.000000 NA 1.000000 56.500000 IGS_098 igs trnA-UGC|rrn23 trnA-UGC-rrn23 107228 107398 0 171 IRb 0.087719 15 0 27 93 no 1.000000 2 1.000000 NA 1.000000 73.000000 rrn23 rRNA rrn23 rrn23 107399 110220 1 2822 IRb 0.009776 27 60 4 101 no 1.000000 2 1.000000 NA 0.978738 49.000000 IGS_099 igs rrn23|rrn4.5 rrn23-rrn4.5 110221 110376 0 156 IRb 0.012658 1 77 142 123 no 1.000000 2 1.000000 NA 0.506410 47.100000 rrn4.5 rRNA rrn4.5 rrn4.5 110377 110475 1 99 IRb 0.000000 0 0 54 24 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_100 igs rrn4.5|rrn5 rrn4.5-rrn5 110476 110741 0 266 IRb 0.013393 3 42 153 15 no 1.000000 2 1.000000 NA 0.842105 47.900000 rrn5 rRNA rrn5 rrn5 110742 110858 1 117 IRb 0.025641 3 0 8 3 no 1.000000 2 1.000000 NA 1.000000 52.500000 IGS_101 igs rrn5|trnR-ACG rrn5-trnR-ACG 110859 111101 0 243 IRb 0.025316 6 6 47 86 no 1.000000 2 1.000000 NA 0.975309 57.900000 trnR-ACG tRNA trnR-ACG trnR-ACG 111102 111179 1 78 IRb 0.000000 0 0 31 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_102 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 111180 111785 0 606 IRb 0.146552 68 142 109 11 no 1.000000 2 1.000000 NA 0.765677 79.200000 trnN-GUU tRNA trnN-GUU trnN-GUU 111786 111862 -1 77 IRb 0.025974 2 0 10 7 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_103 igs trnN-GUU|ycf1 trnN-GUU-ycf1 111863 112356 0 494 IRb 0.424390 174 84 57 19 no 1.000000 2 1.000000 NA 0.829960 79.400000 ycf1 gene ycf1 ycf1 112357 113652 1 1296 IRb 0.438654 404 375 7 0 yes 1.000000 2 1.000000 NA 0.710648 76.900000 IGS_104 igs ycf1|ndhF ycf1-ndhF 113653 114114 0 462 SSC 0.449704 152 124 13 2 no 1.000000 2 1.000000 NA 0.731602 74.700000 ndhF gene ndhF ndhF 114115 116337 -1 2223 SSC 0.083753 183 38 6 25 no 1.000000 2 1.000000 NA 0.982906 77.100000 IGS_105 igs ndhF|rpl32 ndhF-rpl32 116338 116775 0 438 SSC 0.097561 40 28 59 3 no 1.000000 2 1.000000 NA 0.936073 79.000000 rpl32 gene rpl32 rpl32 116776 116922 1 147 SSC 0.089655 13 2 12 2 no 1.000000 2 1.000000 NA 0.986395 72.500000 IGS_106 igs rpl32|trnL-UAG rpl32-trnL-UAG 116923 117814 0 892 SSC 0.095465 80 54 3 103 yes 1.000000 2 1.000000 NA 0.939462 82.200000 trnL-UAG tRNA trnL-UAG trnL-UAG 117815 117894 1 80 SSC 0.000000 0 0 8 23 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_107 igs trnL-UAG|ccsA trnL-UAG-ccsA 117895 117895 0 1 SSC 0.000000 0 0 88 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 ccsA gene ccsA ccsA 117896 118939 1 1044 SSC 0.039347 41 2 89 0 no 1.000000 2 1.000000 NA 0.998084 66.600000 IGS_108 igs ccsA|psaC ccsA-psaC 118940 120921 0 1982 SSC 0.113187 212 109 0 123 yes 1.000000 2 1.000000 NA 0.945005 82.400000 psaC gene psaC psaC 120922 121167 -1 246 SSC 0.012195 3 0 0 9 no 1.000000 2 1.000000 NA 1.000000 44.500000 IGS_109 igs psaC|ndhE psaC-ndhE 121168 121422 0 255 SSC 0.061983 15 13 25 7 no 1.000000 2 1.000000 NA 0.949020 72.700000 ndhE gene ndhE ndhE 121423 121728 -1 306 SSC 0.049020 15 0 1 1 no 1.000000 2 1.000000 NA 1.000000 65.900000 IGS_110 igs ndhE|ndhG ndhE-ndhG 121729 121941 0 213 SSC 0.114833 24 4 15 14 no 1.000000 2 1.000000 NA 0.981221 75.400000 ndhG gene ndhG ndhG 121942 122472 -1 531 SSC 0.041431 22 0 1 10 no 1.000000 2 1.000000 NA 1.000000 66.200000 IGS_111 igs ndhG|ndhI ndhG-ndhI 122473 122900 0 428 SSC 0.067751 25 59 20 5 no 1.000000 2 1.000000 NA 0.862150 72.700000 ndhI gene ndhI ndhI 122901 123407 -1 507 SSC 0.057199 29 0 23 13 no 1.000000 2 1.000000 NA 1.000000 72.400000 IGS_112 igs ndhI|ndhA ndhI-ndhA 123408 123477 0 70 SSC 0.200000 14 0 12 3 no 1.000000 2 1.000000 NA 1.000000 72.700000 ndhA gene ndhA ndhA 123478 125699 -1 2222 SSC 0.038985 86 16 6 10 no 1.000000 2 1.000000 NA 0.992799 65.800000 IGS_113 igs ndhA|ndhH ndhA-ndhH 125700 125700 0 1 SSC 0.000000 0 0 33 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 ndhH gene ndhH ndhH 125701 126912 -1 1212 SSC 0.009106 11 4 34 31 no 1.000000 2 1.000000 NA 0.996700 51.600000 IGS_114 igs ndhH|rps15 ndhH-rps15 126913 126978 0 66 SSC 0.030303 2 0 39 12 no 1.000000 2 1.000000 NA 1.000000 55.800000 rps15 gene rps15 rps15 126979 127434 -1 456 SSC 0.085011 38 9 17 45 no 1.000000 2 1.000000 NA 0.980263 76.900000 IGS_115 igs rps15|ycf1 rps15-ycf1 127435 131856 0 4422 SSC 0.196078 790 393 24 6 no 1.000000 2 1.000000 NA 0.911126 77.600000 ycf1 gene ycf1 ycf1 131857 133971 -1 2115 IRa 0.304374 515 423 23 7 no 1.000000 2 1.000000 NA 0.800000 78.600000 IGS_116 igs ycf1|trnN-GUU ycf1-trnN-GUU 133972 134465 0 494 IRa 0.424390 174 84 19 57 no 1.000000 2 1.000000 NA 0.829960 79.400000 trnN-GUU tRNA trnN-GUU trnN-GUU 134466 134542 1 77 IRa 0.025974 2 0 7 10 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_117 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 134543 135152 0 610 IRa 0.145299 68 142 11 105 no 1.000000 2 1.000000 NA 0.767213 79.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 135153 135222 -1 70 IRa 0.000000 0 0 12 35 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_118 igs trnR-ACG|rrn5 trnR-ACG-rrn5 135223 135469 0 247 IRa 0.024896 6 6 82 47 no 1.000000 2 1.000000 NA 0.975709 57.600000 rrn5 rRNA rrn5 rrn5 135470 135586 -1 117 IRa 0.025641 3 0 3 8 no 1.000000 2 1.000000 NA 1.000000 52.500000 IGS_119 igs rrn5|rrn4.5 rrn5-rrn4.5 135587 135852 0 266 IRa 0.013393 3 42 15 246 no 1.000000 2 1.000000 NA 0.842105 47.900000 rrn4.5 rRNA rrn4.5 rrn4.5 135853 135951 -1 99 IRa 0.000000 0 0 24 147 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_120 igs rrn4.5|rrn23 rrn4.5-rrn23 135952 136107 0 156 IRa 0.015873 1 93 123 142 no 1.000000 2 1.000000 NA 0.403846 47.200000 rrn23 rRNA rrn23 rrn23 136108 138929 -1 2822 IRa 0.009719 27 44 8 4 no 1.000000 2 1.000000 NA 0.984408 48.400000 IGS_121 igs rrn23|trnA-UGC rrn23-trnA-UGC 138930 139096 0 167 IRa 0.089820 15 0 93 31 no 1.000000 2 1.000000 NA 1.000000 73.600000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 139097 139133 -1 37 IRa 0.027027 1 0 17 143 no 1.000000 2 1.000000 NA 1.000000 54.300000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 139946 139985 -1 40 IRa 0.000000 0 0 300 217 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_124 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 139986 140049 0 64 IRa 0.000000 0 0 300 153 no 0.000000 1 0.000000 NA 1.000000 30.200000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 140050 140082 -1 33 IRa 0.000000 0 0 300 120 no 0.000000 1 0.000000 NA 1.000000 27.700000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 141007 141046 -1 40 IRa NA 0 40 300 243 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_127 igs trnI-GAU|rrn16 trnI-GAU-rrn16 141047 141278 0 232 IRa 0.000000 0 62 300 11 no 1.000000 2 1.000000 NA 0.732759 37.100000 rrn16 rRNA rrn16 rrn16 141279 142763 -1 1485 IRa 0.015488 23 0 300 70 no 1.000000 2 1.000000 NA 1.000000 57.900000 IGS_128 igs rrn16|rps12 rrn16-rps12 142764 144680 0 1917 IRa 0.040223 72 127 204 300 yes 1.000000 2 1.000000 NA 0.933751 85.100000 rps12_part2 gene rps12 rps12 144681 145483 1 803 IRa 0.009963 8 0 148 24 no 1.000000 2 1.000000 NA 1.000000 51.300000 rps7 gene rps7 rps7 145389 146093 1 705 IRa 0.053111 35 46 36 139 no 1.000000 2 1.000000 NA 0.934752 79.600000 IGS_130 igs rps7|ndhB rps7-ndhB 146094 146257 0 164 IRa 0.012195 2 0 34 160 no 1.000000 2 1.000000 NA 1.000000 47.100000 ndhB gene ndhB ndhB 146258 148459 1 2202 IRa 0.012739 28 4 11 8 no 1.000000 2 1.000000 NA 0.998183 50.400000 IGS_131 igs ndhB|trnL-CAA ndhB-trnL-CAA 148460 148981 0 522 IRa 0.025292 13 8 111 99 no 1.000000 2 1.000000 NA 0.984674 65.500000 trnL-CAA tRNA trnL-CAA trnL-CAA 148982 149058 1 77 IRa 0.000000 0 0 60 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_132 igs trnL-CAA|ycf15 trnL-CAA-ycf15 149059 149765 0 707 IRa 0.099200 62 82 137 10 no 1.000000 2 1.000000 NA 0.884017 80.900000 ycf15 gene ycf15 ycf15 149766 150218 -1 453 IRa 0.062069 27 18 62 1 no 1.000000 2 1.000000 NA 0.960265 74.600000 IGS_133 igs ycf15|ycf2 ycf15-ycf2 150219 152783 0 2565 IRa 0.107366 258 162 0 1 no 1.000000 2 1.000000 NA 0.936842 81.000000 ycf2 gene ycf2 ycf2 152784 155486 -1 2703 IRa 0.068886 180 90 20 154 no 1.000000 2 1.000000 NA 0.966704 76.800000 IGS_134 igs ycf2|trnI-CAU ycf2-trnI-CAU 155487 156579 0 1093 IRa 0.049470 42 244 33 81 no 1.000000 2 1.000000 NA 0.776761 73.300000 trnI-CAU tRNA trnI-CAU trnI-CAU 156580 156649 1 70 IRa 0.000000 0 0 8 11 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_135 igs trnI-CAU|rpl23 trnI-CAU-rpl23 156650 157073 0 424 IRa 0.110803 40 63 78 1 no 1.000000 2 1.000000 NA 0.851415 76.500000 rpl23 gene rpl23 rpl23 157074 157202 1 129 IRa 0.050420 6 10 29 13 no 1.000000 2 1.000000 NA 0.922481 70.900000 IGS_136 igs rpl23|rpl2 rpl23-rpl2 157203 157220 0 18 IRa 0.055556 1 0 54 51 no 1.000000 2 1.000000 NA 1.000000 70.800000 rpl2 gene rpl2 rpl2 157221 158784 1 1564 IRa 0.035526 54 44 4 50 no 1.000000 2 1.000000 NA 0.971867 66.900000 IGS_137 igs rpl2|rps19 rpl2-rps19 158785 158853 0 69 IRa 0.031746 2 6 5 10 no 1.000000 2 1.000000 NA 0.913043 59.600000 rps19 gene rps19 rps19 158854 159132 1 279 IRa 0.103943 29 0 15 1 no 1.000000 2 1.000000 NA 1.000000 72.600000 IGS_138 igs rps19|trnH-GUG rps19-trnH-GUG 159133 1355 0 1358 LSC 0.230576 92 959 16 78 no 1.000000 2 1.000000 NA 0.293814 67.100000