feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 86 1147 -1 1062 LSC 0.001883 2 0 67 153 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_001 igs psbA|trnK psbA-trnK 1148 1386 0 239 LSC 0.008368 2 0 251 111 no 1.000000 2 1.000000 NA 1.000000 50.600000 trnK_part2 tRNA trnK trnK 1387 1421 -1 35 LSC 0.000000 0 0 75 76 no 0.000000 1 0.000000 NA 1.000000 24.400000 matK gene matK matK 1684 3246 -1 1563 LSC 0.001919 3 0 98 247 no 1.000000 2 1.000000 NA 1.000000 52.100000 IGS_004 igs matK|trnK matK-trnK 3247 4009 0 763 LSC 0.005263 4 3 300 300 no 1.000000 2 1.000000 NA 0.996068 62.200000 trnK_part1 tRNA trnK trnK 4010 4046 -1 37 LSC 0.000000 0 0 26 300 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_005 igs trnK|rps16 trnK-rps16 4047 4629 0 583 LSC 0.003431 2 0 63 208 no 1.000000 2 1.000000 NA 1.000000 50.100000 rps16 gene rps16 rps16 4630 5775 -1 1146 LSC 0.002639 3 9 66 153 no 1.000000 2 1.000000 NA 0.992147 51.000000 IGS_006 igs rps16|trnQ rps16-trnQ 5776 7278 0 1503 LSC 0.017438 26 12 300 88 no 1.000000 2 1.000000 NA 0.992016 61.100000 trnQ tRNA trnQ trnQ 7279 7350 -1 72 LSC 0.000000 0 0 70 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_007 igs trnQ|psbK trnQ-psbK 7351 7688 0 338 LSC 0.005917 2 0 142 20 no 1.000000 2 1.000000 NA 1.000000 43.200000 psbK gene psbK psbK 7689 7874 1 186 LSC 0.005376 1 0 18 287 no 1.000000 2 1.000000 NA 1.000000 41.900000 IGS_008 igs psbK|psbI psbK-psbI 7875 8281 0 407 LSC 0.002481 1 4 165 173 no 1.000000 2 1.000000 NA 0.990172 54.500000 psbI gene psbI psbI 8282 8398 1 117 LSC 0.000000 0 0 119 56 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_009 igs psbI|trnS psbI-trnS 8399 8516 0 118 LSC 0.008475 1 0 236 85 no 1.000000 2 1.000000 NA 1.000000 48.700000 trnS tRNA trnS trnS 8517 8604 -1 88 LSC 0.011364 1 0 61 54 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_010 igs trnS|trnG trnS-trnG 8605 9173 0 569 LSC 0.143382 78 25 2 300 yes 1.000000 2 1.000000 NA 0.956063 82.500000 trnG_part1 tRNA trnG trnG 9174 9196 1 23 LSC 0.000000 0 0 224 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnG_part2 tRNA trnG trnG 9893 9940 1 48 LSC 0.000000 0 0 300 54 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_013 igs trnG|trnR trnG-trnR 9941 10074 0 134 LSC 0.007463 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.800000 trnR tRNA trnR trnR 10075 10146 1 72 LSC 0.000000 0 0 79 252 no 0.000000 1 0.000000 NA 1.000000 24.700000 IGS_014 igs trnR|atpA trnR-atpA 10147 10264 0 118 LSC 0.000000 0 0 151 134 no 0.000000 1 0.000000 NA 1.000000 28.800000 atpA gene atpA atpA 10265 11788 -1 1524 LSC 0.003281 5 0 269 300 no 1.000000 2 1.000000 NA 1.000000 60.600000 IGS_015 igs atpA|atpF atpA-atpF 11789 11866 0 78 LSC 0.000000 0 0 294 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 atpF gene atpF atpF 11867 13505 -1 1639 LSC 0.017099 27 60 300 137 yes 1.000000 2 1.000000 NA 0.963392 67.000000 IGS_016 igs atpF|atpH atpF-atpH 13506 13999 0 494 LSC 0.008130 4 2 201 300 no 1.000000 2 1.000000 NA 0.995951 61.600000 atpH gene atpH atpH 14000 14245 -1 246 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_017 igs atpH|atpI atpH-atpI 14246 14743 0 498 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.900000 atpI gene atpI atpI 14744 15487 -1 744 LSC 0.000000 0 0 300 227 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_018 igs atpI|rps2 atpI-rps2 15488 15730 0 243 LSC 0.004132 1 1 300 93 no 1.000000 2 1.000000 NA 0.995885 47.200000 rps2 gene rps2 rps2 15731 16444 -1 714 LSC 0.005602 4 0 15 300 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_019 igs rps2|rpoC2 rps2-rpoC2 16445 16588 0 144 LSC 0.000000 0 0 43 195 no 0.000000 1 0.000000 NA 1.000000 22.000000 rpoC2 gene rpoC2 rpoC2 16589 20740 -1 4152 LSC 0.002408 10 0 187 114 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_020 igs rpoC2|rpoC1 rpoC2-rpoC1 20741 20916 0 176 LSC 0.005682 1 0 300 162 no 1.000000 2 1.000000 NA 1.000000 52.900000 rpoC1 gene rpoC1 rpoC1 20917 23717 -1 2801 LSC 0.001428 4 0 61 224 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_021 igs rpoC1|rpoB rpoC1-rpoB 23718 23743 0 26 LSC 0.000000 0 0 300 198 no 0.000000 1 0.000000 NA 1.000000 33.600000 rpoB gene rpoB rpoB 23744 26956 -1 3213 LSC 0.002490 8 0 300 170 no 1.000000 2 1.000000 NA 1.000000 54.500000 IGS_022 igs rpoB|trnC rpoB-trnC 26957 28177 0 1221 LSC 0.004149 5 16 27 300 no 1.000000 2 1.000000 NA 0.986896 49.400000 trnC tRNA trnC trnC 28178 28248 1 71 LSC 0.000000 0 0 10 300 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_023 igs trnC|petN trnC-petN 28249 29313 0 1065 LSC 0.000944 1 6 81 300 no 1.000000 2 1.000000 NA 0.994366 50.900000 petN gene petN petN 29314 29403 1 90 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_024 igs petN|psbM petN-psbM 29404 30400 0 997 LSC 0.002121 2 54 300 300 yes 1.000000 2 1.000000 NA 0.945838 64.700000 psbM gene psbM psbM 30401 30505 -1 105 LSC 0.000000 0 0 249 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_025 igs psbM|trnD psbM-trnD 30506 31524 0 1019 LSC 0.002944 3 0 300 78 no 1.000000 2 1.000000 NA 1.000000 51.300000 trnD tRNA trnD trnD 31525 31598 -1 74 LSC 0.000000 0 0 9 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_026 igs trnD|trnY trnD-trnY 31599 31972 0 374 LSC 0.008850 3 35 83 266 no 1.000000 2 1.000000 NA 0.906417 53.900000 trnY tRNA trnY trnY 31973 32056 -1 84 LSC 0.000000 0 0 156 182 no 0.000000 1 0.000000 NA 1.000000 30.400000 IGS_027 igs trnY|trnE trnY-trnE 32057 32115 0 59 LSC 0.000000 0 0 240 123 no 0.000000 1 0.000000 NA 1.000000 28.000000 trnE tRNA trnE trnE 32116 32188 -1 73 LSC 0.000000 0 0 299 50 no 0.000000 1 0.000000 NA 1.000000 22.500000 IGS_028 igs trnE|trnT trnE-trnT 32189 32901 0 713 LSC 0.008427 6 1 300 115 no 1.000000 2 1.000000 NA 0.998597 57.400000 trnT tRNA trnT trnT 32902 32973 1 72 LSC 0.000000 0 0 52 43 no 0.000000 1 0.000000 NA 1.000000 22.000000 IGS_029 igs trnT|psbD trnT-psbD 32974 34031 0 1058 LSC 0.003784 4 1 124 287 no 1.000000 2 1.000000 NA 0.999055 55.300000 psbD gene psbD psbD 34032 35093 1 1062 LSC 0.001883 2 0 300 9 no 1.000000 2 1.000000 NA 1.000000 45.500000 psbC gene psbC psbC 35077 36462 1 1386 LSC 0.002165 3 0 300 297 no 1.000000 2 1.000000 NA 1.000000 60.000000 IGS_031 igs psbC|trnS psbC-trnS 36463 36591 0 129 LSC 0.000000 0 0 300 168 no 0.000000 1 0.000000 NA 1.000000 31.400000 trnS tRNA trnS trnS 36592 36679 -1 88 LSC 0.000000 0 0 300 80 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_032 igs trnS|psbZ trnS-psbZ 36680 37009 0 330 LSC 0.006061 2 0 300 244 no 1.000000 2 1.000000 NA 1.000000 56.600000 psbZ gene psbZ psbZ 37010 37198 1 189 LSC 0.000000 0 0 127 55 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_033 igs psbZ|trnG psbZ-trnG 37199 37435 0 237 LSC 0.034043 8 2 300 103 yes 1.000000 2 1.000000 NA 0.991561 65.600000 IGS_034 igs trnG|trnfM trnG-trnfM 37507 37722 0 216 LSC 0.009434 2 4 125 300 no 1.000000 2 1.000000 NA 0.981481 54.100000 trnfM tRNA trnfM trnfM 37723 37796 -1 74 LSC 0.000000 0 0 92 239 no 0.000000 1 0.000000 NA 1.000000 25.700000 IGS_035 igs trnfM|rps14 trnfM-rps14 37797 37954 0 158 LSC 0.000000 0 0 166 81 no 0.000000 1 0.000000 NA 1.000000 24.800000 rps14 gene rps14 rps14 37955 38257 -1 303 LSC 0.016502 5 0 300 97 no 1.000000 2 1.000000 NA 1.000000 54.300000 IGS_036 igs rps14|psaB rps14-psaB 38258 38397 0 140 LSC 0.014286 2 0 22 300 no 1.000000 2 1.000000 NA 1.000000 47.400000 psaB gene psaB psaB 38398 40602 -1 2205 LSC 0.000907 2 0 11 300 no 1.000000 2 1.000000 NA 1.000000 43.600000 IGS_037 igs psaB|psaA psaB-psaA 40603 40627 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 40628 42880 -1 2253 LSC 0.002219 5 0 300 205 no 1.000000 2 1.000000 NA 1.000000 58.500000 IGS_038 igs psaA|ycf3 psaA-ycf3 42881 43518 0 638 LSC 0.011419 7 25 300 142 yes 1.000000 2 1.000000 NA 0.960815 64.700000 ycf3 gene ycf3 ycf3 43519 45498 -1 1980 LSC 0.002024 4 4 61 245 no 1.000000 2 1.000000 NA 0.997980 48.700000 IGS_039 igs ycf3|trnS ycf3-trnS 45499 46104 0 606 LSC 0.008389 5 10 300 127 no 1.000000 2 1.000000 NA 0.983498 59.700000 trnS tRNA trnS trnS 46105 46184 1 80 LSC 0.000000 0 0 151 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_040 igs trnS|rps4 trnS-rps4 46185 46476 0 292 LSC 0.003425 1 0 231 300 no 1.000000 2 1.000000 NA 1.000000 54.500000 rps4 gene rps4 rps4 46477 47082 -1 606 LSC 0.001650 1 0 244 146 no 1.000000 2 1.000000 NA 1.000000 55.600000 IGS_041 igs rps4|trnT rps4-trnT 47083 47410 0 328 LSC 0.009146 3 0 83 271 no 1.000000 2 1.000000 NA 1.000000 49.600000 trnT tRNA trnT trnT 47411 47483 -1 73 LSC 0.000000 0 0 40 198 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_042 igs trnT|trnL trnT-trnL 47484 48513 0 1030 LSC 0.005302 5 87 113 140 no 1.000000 2 1.000000 NA 0.915534 59.100000 trnL_part1 tRNA trnL trnL 48514 48548 1 35 LSC 0.000000 0 0 59 105 no 0.000000 1 0.000000 NA 1.000000 23.200000 trnL_part2 tRNA trnL trnL 49071 49120 1 50 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_045 igs trnL|trnF trnL-trnF 49121 49487 0 367 LSC 0.000000 0 1 300 175 no 1.000000 2 1.000000 NA 0.997275 52.300000 trnF tRNA trnF trnF 49488 49560 1 73 LSC 0.000000 0 0 300 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_046 igs trnF|ndhJ trnF-ndhJ 49561 50229 0 669 LSC 0.004484 3 0 300 166 no 1.000000 2 1.000000 NA 1.000000 58.800000 ndhJ gene ndhJ ndhJ 50230 50706 -1 477 LSC 0.006289 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.800000 IGS_047 igs ndhJ|ndhK ndhJ-ndhK 50707 50787 0 81 LSC 0.000000 0 0 4 300 no 0.000000 1 0.000000 NA 1.000000 19.100000 ndhK gene ndhK ndhK 50788 51558 -1 771 LSC 0.001297 1 0 85 134 no 1.000000 2 1.000000 NA 1.000000 50.900000 ndhC gene ndhC ndhC 51549 51911 -1 363 LSC 0.002755 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.400000 IGS_049 igs ndhC|trnV ndhC-trnV 51912 53566 0 1655 LSC 0.001248 2 52 218 195 no 1.000000 2 1.000000 NA 0.968580 61.800000 trnV_part2 tRNA trnV trnV 53567 53601 -1 35 LSC 0.000000 0 0 300 160 no 0.000000 1 0.000000 NA 1.000000 30.800000 trnV_part1 tRNA trnV trnV 54188 54226 -1 39 LSC 0.000000 0 0 262 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_052 igs trnV|trnM trnV-trnM 54227 54386 0 160 LSC 0.000000 0 0 300 148 no 0.000000 1 0.000000 NA 1.000000 29.800000 trnM tRNA trnM trnM 54387 54459 1 73 LSC 0.000000 0 0 300 75 no 0.000000 1 0.000000 NA 1.000000 24.400000 IGS_053 igs trnM|atpE trnM-atpE 54460 54628 0 169 LSC 0.005917 1 0 300 180 no 1.000000 2 1.000000 NA 1.000000 54.400000 atpE gene atpE atpE 54629 55033 -1 405 LSC 0.002469 1 0 93 300 no 1.000000 2 1.000000 NA 1.000000 48.100000 atpB gene atpB atpB 55030 56526 -1 1497 LSC 0.002004 3 0 220 105 no 1.000000 2 1.000000 NA 1.000000 52.800000 IGS_055 igs atpB|rbcL atpB-rbcL 56527 57465 0 939 LSC 0.009688 9 10 23 300 no 1.000000 2 1.000000 NA 0.989350 52.100000 rbcL gene rbcL rbcL 57466 58908 1 1443 LSC 0.001386 2 0 33 242 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_056 igs rbcL|accD rbcL-accD 58909 59719 0 811 LSC 0.006297 5 17 300 300 yes 1.000000 2 1.000000 NA 0.979038 64.400000 accD gene accD accD 59720 61213 1 1494 LSC 0.002677 4 0 300 182 no 1.000000 2 1.000000 NA 1.000000 58.900000 IGS_057 igs accD|psaI accD-psaI 61214 61611 0 398 LSC 0.005376 2 26 6 300 no 1.000000 2 1.000000 NA 0.934673 47.500000 psaI gene psaI psaI 61612 61722 1 111 LSC 0.000000 0 0 190 300 no 0.000000 1 0.000000 NA 1.000000 33.000000 IGS_058 igs psaI|ycf4 psaI-ycf4 61723 62084 0 362 LSC 0.000000 0 4 300 300 no 1.000000 2 1.000000 NA 0.988950 54.900000 ycf4 gene ycf4 ycf4 62085 62639 1 555 LSC 0.001802 1 0 300 11 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_059 igs ycf4|cemA ycf4-cemA 62640 63446 0 807 LSC 0.005038 4 13 143 196 no 1.000000 2 1.000000 NA 0.983891 58.900000 cemA gene cemA cemA 63447 64139 1 693 LSC 0.002890 2 1 300 18 no 1.000000 2 1.000000 NA 0.998557 46.900000 IGS_060 igs cemA|petA cemA-petA 64140 64353 0 214 LSC 0.004673 1 0 287 300 no 1.000000 2 1.000000 NA 1.000000 55.200000 petA gene petA petA 64354 65316 1 963 LSC 0.001038 1 0 195 64 no 1.000000 2 1.000000 NA 1.000000 49.100000 IGS_061 igs petA|psbJ petA-psbJ 65317 66428 0 1112 LSC 0.013489 15 0 257 219 yes 1.000000 2 1.000000 NA 1.000000 66.500000 psbJ gene psbJ psbJ 66429 66551 -1 123 LSC 0.000000 0 0 57 96 no 0.000000 1 0.000000 NA 1.000000 23.000000 IGS_062 igs psbJ|psbL psbJ-psbL 66552 66679 0 128 LSC 0.007812 1 0 180 300 no 1.000000 2 1.000000 NA 1.000000 55.500000 psbL gene psbL psbL 66680 66796 -1 117 LSC 0.000000 0 0 31 300 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_063 igs psbL|psbF psbL-psbF 66797 66818 0 22 LSC 0.000000 0 0 148 300 no 0.000000 1 0.000000 NA 1.000000 29.800000 psbF gene psbF psbF 66819 66938 -1 120 LSC 0.000000 0 0 170 300 no 0.000000 1 0.000000 NA 1.000000 31.500000 IGS_064 igs psbF|psbE psbF-psbE 66939 66955 0 17 LSC 0.000000 0 0 290 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 66956 67207 -1 252 LSC 0.000000 0 0 300 120 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_065 igs psbE|petL psbE-petL 67208 68171 0 964 LSC 0.004180 4 7 300 300 no 1.000000 2 1.000000 NA 0.992739 61.900000 petL gene petL petL 68172 68267 1 96 LSC 0.000000 0 0 251 232 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_066 igs petL|petG petL-petG 68268 68436 0 169 LSC 0.000000 0 1 300 63 no 1.000000 2 1.000000 NA 0.994083 42.800000 petG gene petG petG 68437 68550 1 114 LSC 0.008772 1 0 300 203 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_067 igs petG|trnW petG-trnW 68551 68659 0 109 LSC 0.000000 0 0 50 94 no 0.000000 1 0.000000 NA 1.000000 22.500000 trnW tRNA trnW trnW 68660 68733 -1 74 LSC 0.000000 0 0 159 20 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_068 igs trnW|trnP trnW-trnP 68734 68904 0 171 LSC 0.006098 1 7 233 300 no 1.000000 2 1.000000 NA 0.959064 59.900000 trnP tRNA trnP trnP 68905 68978 -1 74 LSC 0.000000 0 0 150 228 no 0.000000 1 0.000000 NA 1.000000 30.000000 IGS_069 igs trnP|psaJ trnP-psaJ 68979 69337 0 359 LSC 0.005666 2 6 224 300 no 1.000000 2 1.000000 NA 0.983287 58.600000 psaJ gene psaJ psaJ 69338 69472 1 135 LSC 0.000000 0 0 26 300 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 69473 69994 0 522 LSC 0.000000 0 25 161 15 no 1.000000 2 1.000000 NA 0.952107 47.900000 rpl33 gene rpl33 rpl33 69995 70195 1 201 LSC 0.004975 1 0 300 77 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_071 igs rpl33|rps18 rpl33-rps18 70196 70359 0 164 LSC 0.018750 3 4 185 263 yes 1.000000 2 1.000000 NA 0.975610 64.500000 rps18 gene rps18 rps18 70360 70665 1 306 LSC 0.003268 1 0 25 254 no 1.000000 2 1.000000 NA 1.000000 41.400000 IGS_072 igs rps18|rpl20 rps18-rpl20 70666 70929 0 264 LSC 0.003788 1 0 42 111 no 1.000000 2 1.000000 NA 1.000000 42.800000 rpl20 gene rpl20 rpl20 70930 71283 -1 354 LSC 0.011299 4 0 9 300 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_073 igs rpl20|rps12 rpl20-rps12 71284 72023 0 740 LSC 0.001355 1 2 88 300 no 1.000000 2 1.000000 NA 0.997297 51.400000 rps12_part1 gene rps12 rps12 72024 72137 -1 114 LSC 0.000000 0 0 277 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_074 igs rps12|clpP1 rps12-clpP1 72138 72268 0 131 LSC 0.000000 0 0 300 194 no 0.000000 1 0.000000 NA 1.000000 33.300000 clpP1 gene clpP1 clpP1 72269 74326 -1 2058 LSC 0.001464 3 9 300 128 no 1.000000 2 1.000000 NA 0.995627 53.500000 IGS_075 igs clpP1|psbB clpP1-psbB 74327 74759 0 433 LSC 0.006944 3 1 300 128 no 1.000000 2 1.000000 NA 0.997691 54.100000 psbB gene psbB psbB 74760 76286 1 1527 LSC 0.002620 4 0 85 300 no 1.000000 2 1.000000 NA 1.000000 51.600000 IGS_076 igs psbB|psbT psbB-psbT 76287 76479 0 193 LSC 0.000000 0 8 221 268 no 1.000000 2 1.000000 NA 0.958549 56.500000 psbT gene psbT psbT 76480 76587 1 108 LSC 0.000000 0 0 300 160 no 0.000000 1 0.000000 NA 1.000000 30.800000 IGS_077 igs psbT|psbN psbT-psbN 76588 76651 0 64 LSC 0.000000 0 0 300 96 no 0.000000 1 0.000000 NA 1.000000 25.900000 psbN gene psbN psbN 76652 76783 -1 132 LSC 0.007576 1 0 300 126 no 1.000000 2 1.000000 NA 1.000000 51.300000 IGS_078 igs psbN|psbH psbN-psbH 76784 76894 0 111 LSC 0.000000 0 0 35 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 psbH gene psbH psbH 76895 77116 1 222 LSC 0.004505 1 0 146 286 no 1.000000 2 1.000000 NA 1.000000 51.000000 IGS_079 igs psbH|petB psbH-petB 77117 77225 0 109 LSC 0.000000 0 0 206 177 no 0.000000 1 0.000000 NA 1.000000 32.000000 petB gene petB petB 77226 78660 1 1435 LSC 0.004909 7 9 300 300 no 1.000000 2 1.000000 NA 0.993728 62.200000 IGS_080 igs petB|petD petB-petD 78661 78873 0 213 LSC 0.000000 0 0 300 188 no 0.000000 1 0.000000 NA 1.000000 32.900000 petD gene petD petD 78874 80144 1 1271 LSC 0.005556 7 11 300 6 no 1.000000 2 1.000000 NA 0.991345 48.200000 IGS_081 igs petD|rpoA petD-rpoA 80145 80317 0 173 LSC 0.005780 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.800000 rpoA gene rpoA rpoA 80318 81325 -1 1008 LSC 0.002010 2 13 166 63 no 1.000000 2 1.000000 NA 0.987103 50.900000 IGS_082 igs rpoA|rps11 rpoA-rps11 81326 81393 0 68 LSC 0.014706 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.000000 rps11 gene rps11 rps11 81394 81810 -1 417 LSC 0.002398 1 0 4 123 no 1.000000 2 1.000000 NA 1.000000 41.600000 IGS_083 igs rps11|rpl36 rps11-rpl36 81811 81928 0 118 LSC 0.000000 0 0 44 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 rpl36 gene rpl36 rpl36 81929 82042 -1 114 LSC 0.008772 1 0 162 300 no 1.000000 2 1.000000 NA 1.000000 54.700000 IGS_084 igs rpl36|infA rpl36-infA 82043 82054 0 12 LSC 0.000000 0 0 108 300 no 0.000000 1 0.000000 NA 1.000000 26.900000 infA gene infA infA 82055 82386 -1 332 LSC 0.000000 0 0 120 82 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_085 igs infA|rps8 infA-rps8 82387 82505 0 119 LSC 0.008403 1 0 300 112 no 1.000000 2 1.000000 NA 1.000000 50.700000 rps8 gene rps8 rps8 82506 82904 -1 399 LSC 0.005013 2 0 36 99 no 1.000000 2 1.000000 NA 1.000000 45.100000 IGS_086 igs rps8|rpl14 rps8-rpl14 82905 83108 0 204 LSC 0.004902 1 0 6 300 no 1.000000 2 1.000000 NA 1.000000 40.800000 rpl14 gene rpl14 rpl14 83109 83477 -1 369 LSC 0.002710 1 0 104 78 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_087 igs rpl14|rpl16 rpl14-rpl16 83478 83611 0 134 LSC 0.022901 3 3 32 52 no 1.000000 2 1.000000 NA 0.977612 55.200000 rpl16 gene rpl16 rpl16 83612 85033 -1 1422 LSC 0.005065 7 40 25 62 no 1.000000 2 1.000000 NA 0.971871 51.200000 IGS_088 igs rpl16|rps3 rpl16-rps3 85034 85183 0 150 LSC 0.020000 3 0 61 29 no 1.000000 2 1.000000 NA 1.000000 51.200000 rps3 gene rps3 rps3 85184 85846 -1 663 LSC 0.006033 4 0 19 266 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_089 igs rps3|rpl22 rps3-rpl22 85847 85893 0 47 LSC 0.000000 0 0 91 219 no 0.000000 1 0.000000 NA 1.000000 25.600000 rpl22 gene rpl22 rpl22 85894 86292 -1 399 LSC 0.010390 4 14 138 300 no 1.000000 2 1.000000 NA 0.964912 59.200000 IGS_090 igs rpl22|rps19 rpl22-rps19 86293 86347 0 55 IRb 0.000000 0 2 55 300 no 1.000000 2 1.000000 NA 0.963636 45.100000 rps19 gene rps19 rps19 86348 86626 -1 279 IRb 0.000000 0 0 110 300 no 0.000000 1 0.000000 NA 1.000000 27.000000 IGS_091 igs rps19|trnH rps19-trnH 86627 86762 0 136 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnH tRNA trnH trnH 86763 86837 1 75 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_092 igs trnH|rpl2 trnH-rpl2 86838 86884 0 47 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 86885 88375 -1 1491 IRb 0.002683 4 0 300 19 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_093 igs rpl2|rpl23 rpl2-rpl23 88376 88410 0 35 IRb 0.028571 1 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 68.900000 rpl23 gene rpl23 rpl23 88411 88692 -1 282 IRb 0.000000 0 0 15 158 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_094 igs rpl23|trnI rpl23-trnI 88693 88857 0 165 IRb 0.006061 1 0 297 300 no 1.000000 2 1.000000 NA 1.000000 56.000000 IGS_095 igs trnI|ycf2 trnI-ycf2 88932 89022 0 91 IRb 0.000000 0 0 80 191 no 0.000000 1 0.000000 NA 1.000000 24.800000 ycf2 gene ycf2 ycf2 89023 95910 1 6888 IRb 0.001311 9 24 171 300 no 1.000000 2 1.000000 NA 0.996516 51.400000 IGS_096 igs ycf2|trnL ycf2-trnL 95911 96943 0 1033 IRb 0.000973 1 5 300 300 no 1.000000 2 1.000000 NA 0.995160 59.800000 IGS_097 igs trnL|ndhB trnL-ndhB 97025 97574 0 550 IRb 0.001835 1 5 300 300 no 1.000000 2 1.000000 NA 0.990909 59.600000 ndhB gene ndhB ndhB 97575 99806 -1 2232 IRb 0.001344 3 0 115 26 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_098 igs ndhB|rps7 ndhB-rps7 99807 100129 0 323 IRb 0.003096 1 0 300 108 no 1.000000 2 1.000000 NA 1.000000 47.900000 rps7 gene rps7 rps7 100130 100597 -1 468 IRb 0.002137 1 0 296 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_099 igs rps7|rps12 rps7-rps12 100598 100655 0 58 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 100656 101457 -1 802 IRb 0.002494 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.200000 IGS_100 igs rps12|trnV rps12-trnV 101458 103265 0 1808 IRb 0.001671 3 13 300 300 no 1.000000 2 1.000000 NA 0.992810 59.800000 IGS_101 igs trnV|rrn16 trnV-rrn16 103338 103562 0 225 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 103563 105053 1 1491 IRb 0.000000 0 0 300 283 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_102 igs rrn16|trnI rrn16-trnI 105054 105354 0 301 IRb 0.003322 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 trnI_part1 tRNA trnI trnI 105355 105391 1 37 IRb 0.000000 0 0 17 300 no 0.000000 1 0.000000 NA 1.000000 20.000000 trnI_part2 tRNA trnI trnI 106332 106366 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_105 igs trnI|trnA trnI-trnA 106367 106431 0 65 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part1 tRNA trnA trnA 106432 106469 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part2 tRNA trnA trnA 107285 107319 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_108 igs trnA|rrn23 trnA-rrn23 107320 107464 0 145 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 107465 110275 1 2811 IRb 0.000356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_109 igs rrn23|rrn4.5 rrn23-rrn4.5 110276 110373 0 98 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 110374 110476 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_110 igs rrn4.5|rrn5 rrn4.5-rrn5 110477 110697 0 221 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 110698 110818 1 121 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_111 igs rrn5|trnR rrn5-trnR 110819 111068 0 250 IRb 0.000000 0 0 300 251 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnR tRNA trnR trnR 111069 111142 1 74 IRb 0.000000 0 0 300 177 no 0.000000 1 0.000000 NA 1.000000 32.000000 IGS_112 igs trnR|trnN trnR-trnN 111143 111750 0 608 IRb 0.001645 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.700000 trnN tRNA trnN trnN 111751 111822 -1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_113 igs trnN|ycf1 trnN-ycf1 111823 112171 0 349 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.800000 ycf1 gene ycf1 ycf1 112172 117616 1 5445 SSC 0.004592 25 1 300 68 no 1.000000 2 1.000000 NA 0.999816 45.300000 IGS_114 igs ycf1|rps15 ycf1-rps15 117617 117945 0 329 SSC 0.008264 2 87 300 117 no 1.000000 2 1.000000 NA 0.735562 50.200000 rps15 gene rps15 rps15 117946 118215 1 270 SSC 0.007407 2 0 211 300 no 1.000000 2 1.000000 NA 1.000000 56.800000 IGS_115 igs rps15|ndhH rps15-ndhH 118216 118335 0 120 SSC 0.000000 0 0 89 300 no 0.000000 1 0.000000 NA 1.000000 25.400000 ndhH gene ndhH ndhH 118336 119517 1 1182 SSC 0.003384 4 0 209 32 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_116 igs ndhH|ndhA ndhH-ndhA 119518 119518 0 1 SSC 0.000000 0 0 300 31 no 0.000000 1 0.000000 NA 1.000000 21.100000 ndhA gene ndhA ndhA 119519 121744 1 2226 SSC 0.004545 6 906 300 300 no 1.000000 2 1.000000 NA 0.592992 54.500000 IGS_117 igs ndhA|ndhI ndhA-ndhI 121745 121832 0 88 SSC NA 0 88 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 ndhI gene ndhI ndhI 121833 122375 1 543 SSC NA 0 543 300 300 no 1.000000 2 1.000000 NA 0.000000 45.100000 IGS_118 igs ndhI|ndhG ndhI-ndhG 122376 122742 0 367 SSC NA 0 367 300 300 no 1.000000 2 1.000000 NA 0.000000 41.400000 ndhG gene ndhG ndhG 122743 123273 1 531 SSC NA 0 531 300 300 no 1.000000 2 1.000000 NA 0.000000 44.800000 IGS_119 igs ndhG|ndhE ndhG-ndhE 123274 123450 0 177 SSC NA 0 177 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 ndhE gene ndhE ndhE 123451 123756 1 306 SSC NA 0 306 300 300 no 1.000000 2 1.000000 NA 0.000000 40.100000 IGS_120 igs ndhE|psaC ndhE-psaC 123757 124217 0 461 SSC NA 0 461 300 300 no 1.000000 2 1.000000 NA 0.000000 43.400000 psaC gene psaC psaC 124218 124463 1 246 SSC NA 0 246 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_121 igs psaC|ndhD psaC-ndhD 124464 124588 0 125 SSC NA 0 125 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 ndhD gene ndhD ndhD 124589 126091 1 1503 SSC NA 0 1503 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_122 igs ndhD|ccsA ndhD-ccsA 126092 126329 0 238 SSC NA 0 238 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 ccsA gene ccsA ccsA 126330 127355 -1 1026 SSC NA 0 1026 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_123 igs ccsA|trnL ccsA-trnL 127356 127373 0 18 SSC NA 0 18 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_124 igs trnL|rpl32 trnL-rpl32 127454 128258 0 805 SSC 0.000000 0 274 300 296 no 1.000000 2 1.000000 NA 0.659627 55.400000 rpl32 gene rpl32 rpl32 128259 128432 -1 174 SSC 0.000000 0 0 300 122 no 0.000000 1 0.000000 NA 1.000000 27.900000 IGS_125 igs rpl32|ndhF rpl32-ndhF 128433 129373 0 941 SSC 0.255889 239 7 300 2 yes 1.000000 2 1.000000 NA 0.992561 79.600000 ndhF gene ndhF ndhF 129374 131617 1 2244 SSC 0.372321 834 4 3 18 yes 1.000000 2 1.000000 NA 0.998217 77.600000 IGS_126 igs ndhF|trnN ndhF-trnN 131618 132918 0 1301 IRa 0.000769 1 0 45 300 no 1.000000 2 1.000000 NA 1.000000 47.600000 trnN tRNA trnN trnN 132919 132990 1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_127 igs trnN|trnR trnN-trnR 132991 133598 0 608 IRa 0.001645 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.700000 trnR tRNA trnR trnR 133599 133672 -1 74 IRa 0.000000 0 0 177 300 no 0.000000 1 0.000000 NA 1.000000 32.000000 IGS_128 igs trnR|rrn5 trnR-rrn5 133673 133922 0 250 IRa 0.000000 0 0 251 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 133923 134043 -1 121 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_129 igs rrn5|rrn4.5 rrn5-rrn4.5 134044 134264 0 221 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 134265 134367 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_130 igs rrn4.5|rrn23 rrn4.5-rrn23 134368 134465 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 134466 137276 -1 2811 IRa 0.000356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_131 igs rrn23|trnA rrn23-trnA 137277 137421 0 145 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part2 tRNA trnA trnA 137422 137456 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part1 tRNA trnA trnA 138272 138309 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_134 igs trnA|trnI trnA-trnI 138310 138371 0 62 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 138372 138409 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part1 tRNA trnI trnI 139350 139386 -1 37 IRa 0.000000 0 0 300 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_137 igs trnI|rrn16 trnI-rrn16 139387 139687 0 301 IRa 0.003322 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 rrn16 rRNA rrn16 rrn16 139688 141178 -1 1491 IRa 0.000000 0 0 283 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_138 igs rrn16|trnV rrn16-trnV 141179 141403 0 225 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_139 igs trnV|rps12 trnV-rps12 141476 143283 0 1808 IRa 0.001671 3 13 300 300 no 1.000000 2 1.000000 NA 0.992810 59.800000 rps12_part2 gene rps12 rps12 143284 144085 1 802 IRa 0.002494 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.200000 IGS_140 igs rps12|rps7 rps12-rps7 144086 144143 0 58 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 144144 144611 1 468 IRa 0.002137 1 0 300 296 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_141 igs rps7|ndhB rps7-ndhB 144612 144934 0 323 IRa 0.003096 1 0 108 300 no 1.000000 2 1.000000 NA 1.000000 47.900000 ndhB gene ndhB ndhB 144935 147166 1 2232 IRa 0.001344 3 0 26 115 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_142 igs ndhB|trnL ndhB-trnL 147167 147716 0 550 IRa 0.001835 1 5 300 300 no 1.000000 2 1.000000 NA 0.990909 59.600000 IGS_143 igs trnL|ycf2 trnL-ycf2 147798 148830 0 1033 IRa 0.000973 1 5 300 300 no 1.000000 2 1.000000 NA 0.995160 59.800000 ycf2 gene ycf2 ycf2 148831 155718 -1 6888 IRa 0.001311 9 24 300 171 no 1.000000 2 1.000000 NA 0.996516 51.400000 IGS_144 igs ycf2|trnI ycf2-trnI 155719 155809 0 91 IRa 0.000000 0 0 191 80 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_145 igs trnI|rpl23 trnI-rpl23 155884 156048 0 165 IRa 0.006061 1 0 300 297 no 1.000000 2 1.000000 NA 1.000000 56.000000 rpl23 gene rpl23 rpl23 156049 156330 1 282 IRa 0.000000 0 0 158 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_146 igs rpl23|rpl2 rpl23-rpl2 156331 156365 0 35 IRa 0.028571 1 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 68.900000 rpl2 gene rpl2 rpl2 156366 157856 1 1491 IRa 0.002683 4 0 19 300 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_147 igs rpl2|trnH rpl2-trnH 157857 157903 0 47 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnH tRNA trnH trnH 157904 157978 -1 75 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_148 igs trnH|rps19 trnH-rps19 157979 158114 0 136 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps19 gene rps19 rps19 158115 158393 1 279 IRa 0.000000 0 0 300 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 IGS_149 igs rps19|psbA rps19-psbA 158394 85 0 149 LSC 0.013793 2 4 300 300 no 1.000000 2 1.000000 NA 0.973154 63.000000