primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 CTGCCTTAATCCACTTGGCT ACCTCCAGTTTGATCAGGGA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.179582 116 541 848-875 1.000000 86.0 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CTGCCTTAATCCACTTGGCT TCAGTGCTATGCATGGTTCC 20 20 50.0 50.0 57.9 58.0 0.0 10.2 0.177475 116 541 874-901 1.000000 85.8 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 ACTGCCTTAATCCACTTGGC ACCTCCAGTTTGATCAGGGA 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.205369 116 541 849-876 1.000000 85.8 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 CTGCCTTAATCCACTTGGCT CAGTGCTATGCATGGTTCCT 20 20 50.0 50.0 57.9 58.0 0.0 10.2 0.183233 116 541 873-900 1.000000 85.7 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACTGCCTTAATCCACTTGGC TCAGTGCTATGCATGGTTCC 20 20 50.0 50.0 58.2 58.0 0.0 10.2 0.203262 116 541 875-902 1.000000 85.6 trnG-GCC-trnR-UCU_p1 trnG-GCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 8992 9646 735-811 1.000000 68.6 trnG-GCC-trnR-UCU_p2 trnG-GCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 8992 9646 738-814 1.000000 68.4 trnG-GCC-trnR-UCU_p3 trnG-GCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 8992 9646 741-817 1.000000 67.9 trnG-GCC-trnR-UCU_p4 trnG-GCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 8992 9646 744-820 1.000000 67.7 trnG-GCC-trnR-UCU_p5 trnG-GCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 8992 9646 739-815 1.000000 66.2 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 TGGAAAAGCGTCCATTGTCT ATTCGGGAACAGATGGAACG 20 20 45.0 50.0 57.7 58.0 3.0 0.0 0.294528 9719 10026 432-455 1.000000 84.5 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 TGGAAAAGCGTCCATTGTCT CGGGAACAGATGGAACGTTT 20 20 45.0 50.0 57.7 58.5 3.0 0.5 0.750944 9719 10026 429-452 1.000000 80.9 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 TTTGGAATGGAAAAGCGTCC ATTCGGGAACAGATGGAACG 20 20 45.0 50.0 56.9 58.0 0.0 0.0 1.122833 9719 10026 439-462 1.000000 77.9 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 TGGAAAAGCGTCCATTGTCT GCTATTCGGGAACAGATGGA 20 20 45.0 50.0 57.7 57.1 3.0 0.0 1.181040 9719 10026 435-458 1.000000 77.4 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 TGGAAAAGCGTCCATTGTCT AGCTATTCGGGAACAGATGG 20 20 45.0 50.0 57.7 57.1 3.0 0.0 1.189064 9719 10026 436-459 1.000000 77.4 trnC-GCA-petN_p1 trnC-GCA-petN 1 GGGTGTCGCCTGATTAACAA AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.2 58.2 1.7 0.0 0.335274 28706 29708 1029-1051 1.000000 80.5 trnC-GCA-petN_p2 trnC-GCA-petN 2 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 28706 29708 1065-1087 1.000000 79.0 trnC-GCA-petN_p3 trnC-GCA-petN 3 CTGCAAATCCTTTTTCCCCG AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 57.6 58.2 0.0 0.0 0.520003 28706 29708 1059-1081 1.000000 78.9 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGTGTCGCCTGATTAACAA AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.2 57.6 1.7 0.0 0.534788 28706 29708 1090-1112 1.000000 78.7 trnC-GCA-petN_p5 trnC-GCA-petN 5 TCCTTTTTCCCCGGTTCAAA AGCCCAAGCGAGACTTACTA 20 20 45.0 50.0 57.5 58.2 0.0 0.0 0.607421 28706 29708 1052-1074 1.000000 78.2 petN-psbM_p1 petN-psbM 1 TAGTAAGTCTCGCTTGGGCT GCGCTGTTCATTCTTGTTCC 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.182245 29799 30903 1217-1260 1.000000 82.5 petN-psbM_p2 petN-psbM 2 ATGGGGAAGAAGTGGACTCT GCGCTGTTCATTCTTGTTCC 20 20 50.0 50.0 57.6 58.0 0.0 0.0 0.381759 29799 30903 1156-1199 1.000000 81.1 petN-psbM_p3 petN-psbM 3 TAGTAAGTCTCGCTTGGGCT ATTGCTACTGCGCTGTTCAT 20 20 50.0 45.0 58.2 58.3 0.0 25.3 0.408587 29799 30903 1226-1269 1.000000 80.7 petN-psbM_p4 petN-psbM 4 TAGTAAGTCTCGCTTGGGCT TATTGCTACTGCGCTGTTCA 20 20 50.0 45.0 58.2 57.6 0.0 25.3 0.529793 29799 30903 1227-1270 1.000000 79.7 petN-psbM_p5 petN-psbM 5 TAGTAAGTCTCGCTTGGGCT ACTGCGCTGTTCATTCTTGT 20 20 50.0 45.0 58.2 58.4 0.0 14.8 0.553606 29799 30903 1220-1263 1.000000 79.5 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CCATTTCGTGGTGGATCAGT GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.119831 32830 33509 1037-1076 1.000000 84.4 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CCATTTCGTGGTGGATCAGT TACCGCTGAGTTAAAAGGGC 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.217397 32830 33509 1002-1041 1.000000 83.8 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TGCCACGTTGTAACAGAGAC GAACCGATGACTTACGCCTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.145295 32830 33509 1389-1428 1.000000 83.0 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 CCATTTCGTGGTGGATCAGT ACTTTTCTGCGGAAGAAGGG 20 20 50.0 50.0 57.9 58.1 0.0 22.8 0.216300 32830 33509 1596-1641 1.000000 82.5 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 TGCCACGTTGTAACAGAGAC ACTTTTCTGCGGAAGAAGGG 20 20 50.0 50.0 58.1 58.1 0.0 22.8 0.241764 32830 33509 1948-1993 1.000000 81.6 trnS-GGA-rps4_p1 trnS-GGA-rps4 1 TTCGAATCCCTCTCTTTCCG TCCAACACAAAGGATTGGTCA 20 21 50.0 42.9 57.0 57.7 0.0 2.4 2.266437 47827 48122 399-417 1.000000 68.2 trnS-GGA-rps4_p2 trnS-GGA-rps4 2 GGGTTCGAATCCCTCTCTTT TCCAACACAAAGGATTGGTCA 20 21 50.0 42.9 56.9 57.7 17.2 2.4 2.387466 47827 48122 402-420 1.000000 67.2 trnS-GGA-rps4_p3 trnS-GGA-rps4 3 GGGTTCGAATCCCTCTCTTTC TCCAACACAAAGGATTGGTCA 21 21 52.4 42.9 58.1 57.7 17.2 2.4 2.397276 47827 48122 402-420 1.000000 67.1 trnS-GGA-rps4_p4 trnS-GGA-rps4 4 GGTTCGAATCCCTCTCTTTCC TCCAACACAAAGGATTGGTCA 21 21 52.4 42.9 58.1 57.7 0.0 2.4 2.397276 47827 48122 401-419 1.000000 67.1 trnS-GGA-rps4_p5 trnS-GGA-rps4 5 GTTCGAATCCCTCTCTTTCCG TCCAACACAAAGGATTGGTCA 21 21 52.4 42.9 58.5 57.7 0.0 2.4 2.763355 47827 48122 400-418 1.000000 64.2 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 ATGGGGGATAAAACTCCGGA GCATGTTGGGTCTTTGAAGC 20 20 50.0 50.0 58.1 57.9 2.9 0.0 0.168614 53172 54322 1328-1367 1.000000 83.4 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCCGGAAATTCGAAATGCCA GCATGTTGGGTCTTTGAAGC 20 20 45.0 50.0 58.2 57.9 10.9 0.0 0.242580 53172 54322 1314-1353 1.000000 82.9 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ATGGGGGATAAAACTCCGGA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.1 57.8 2.9 0.0 0.295635 53172 54322 1264-1303 1.000000 82.6 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TCCGGAAATTCGAAATGCCA AGAAGGTCTACGGTTCGAGT 20 20 45.0 50.0 58.2 57.8 10.9 0.0 0.369602 53172 54322 1250-1289 1.000000 82.1 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGGGGGATAAAACTCCGGAA GCATGTTGGGTCTTTGAAGC 20 20 50.0 50.0 58.3 57.9 5.2 0.0 0.398968 53172 54322 1327-1366 1.000000 81.6 atpB-rbcL_p1 atpB-rbcL 1 GCCAATGATTTGAGCGATCC GCCTTGAATCCAACACTTGC 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.482682 57411 58206 922-941 1.000000 77.5 atpB-rbcL_p2 atpB-rbcL 2 GGCCAATGATTTGAGCGATC GCCTTGAATCCAACACTTGC 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.482682 57411 58206 923-942 1.000000 77.5 atpB-rbcL_p3 atpB-rbcL 3 GCCAATGATTTGAGCGATCC CCAGCCTTGAATCCAACACT 20 20 50.0 50.0 57.6 58.1 0.0 0.0 0.497280 57411 58206 925-944 1.000000 77.4 atpB-rbcL_p4 atpB-rbcL 4 GGCCAATGATTTGAGCGATC CCAGCCTTGAATCCAACACT 20 20 50.0 50.0 57.6 58.1 0.0 0.0 0.497280 57411 58206 926-945 1.000000 77.4 atpB-rbcL_p5 atpB-rbcL 5 TTTTCAAACGCGGAAACTCC GCCTTGAATCCAACACTTGC 20 20 45.0 50.0 57.5 57.9 12.5 0.0 0.548809 57411 58206 888-907 1.000000 77.0 psbE-petL_p1 psbE-petL 1 AGAACGTTCTCCTGTGCTTC ACCAATAAATAGGGCTGACGT 20 21 50.0 42.9 57.8 57.1 24.9 0.0 2.082401 68310 69801 1475-1621 1.000000 69.2 psbE-petL_p2 psbE-petL 2 GTTCTCCTGTGCTTCCAGAC ACCAATAAATAGGGCTGACGT 20 21 55.0 42.9 58.2 57.1 0.9 0.0 2.123989 68310 69801 1470-1616 1.000000 68.9 psbE-petL_p3 psbE-petL 3 AGAACGTTCTCCTGTGCTTC AGACCAATAAATAGGGCTGACG 20 22 50.0 45.5 57.8 57.9 24.9 0.0 2.229636 68310 69801 1477-1623 1.000000 68.0 psbE-petL_p4 psbE-petL 4 ACCTGCAATGAATAGGGACG ACCAATAAATAGGGCTGACGT 20 21 50.0 42.9 57.7 57.1 0.0 0.0 2.258121 68310 69801 1550-1696 1.000000 67.7 psbE-petL_p5 psbE-petL 5 CTGCAATGAATAGGGACGGT ACCAATAAATAGGGCTGACGT 20 21 50.0 42.9 57.7 57.1 0.0 0.0 2.258121 68310 69801 1548-1694 1.000000 67.7 rpl33-rps18_p1 rpl33-rps18 1 AGAATCGACACAATACGCCT GGGGTCGCTTGGACTTAAAA 20 20 45.0 50.0 57.0 58.1 0.0 0.0 1.061281 72026 72303 407-413 1.000000 77.7 rpl33-rps18_p2 rpl33-rps18 2 CTGTCCCTATTGTTCCAAGCA GGGGTCGCTTGGACTTAAAA 21 20 47.6 50.0 57.9 58.1 0.0 0.0 1.171628 72026 72303 364-370 1.000000 77.6 rpl33-rps18_p3 rpl33-rps18 3 CGACACAATACGCCTAATCG GGGGTCGCTTGGACTTAAAA 20 20 50.0 50.0 56.8 58.1 0.0 0.0 1.280574 72026 72303 402-408 1.000000 76.0 rpl33-rps18_p4 rpl33-rps18 4 AGAATCGACACAATACGCCT TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.0 57.7 0.0 0.0 1.216072 72026 72303 450-456 1.000000 75.9 rpl33-rps18_p5 rpl33-rps18 5 CTGTCCCTATTGTTCCAAGCA TCAATTCGATCCCCCGATTG 21 20 47.6 50.0 57.9 57.7 0.0 0.0 1.326420 72026 72303 407-413 1.000000 75.6 rps18_p1 rps18 1 AACGATAGCGGCTTTACAGG CCGGGAGAATGAATTCCGAG 20 20 50.0 55.0 58.1 58.1 8.3 2.3 0.192987 72304 72609 818-825 1.000000 82.3 rps18_p2 rps18 2 AACGATAGCGGCTTTACAGG ACGAGGATATATAGCGCGGA 20 20 50.0 50.0 58.1 58.0 8.3 8.8 0.098172 72304 72609 1204-1211 1.000000 82.2 rps18_p3 rps18 3 CGGAAAATCGAAGCGTTGAG ACGAGGATATATAGCGCGGA 20 20 50.0 50.0 57.9 58.0 0.0 8.8 0.179157 72304 72609 1461-1468 1.000000 81.1 rps18_p4 rps18 4 AACGATAGCGGCTTTACAGG GAAAGTGGAAGGGGTACGTC 20 20 50.0 55.0 58.1 57.9 8.3 0.0 0.154467 72304 72609 868-870 0.800000 72.8 rps18_p5 rps18 5 CGGAAAATCGAAGCGTTGAG GAAAGTGGAAGGGGTACGTC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.235453 72304 72609 1125-1127 0.800000 71.8 rpl20-rps12_p1 rpl20-rps12 1 TCCGCGCTATATATCCTCGT GAGGAACATGTACTCGGGTG 20 20 50.0 55.0 58.0 57.7 5.6 12.9 0.329357 73254 74073 876-892 1.000000 78.7 rpl20-rps12_p2 rpl20-rps12 2 TCCGCGCTATATATCCTCGT AGGAACATGTACTCGGGTGT 20 20 50.0 50.0 58.0 58.4 5.6 0.0 0.393188 73254 74073 875-891 1.000000 78.2 rpl20-rps12_p3 rpl20-rps12 3 TCCGCGCTATATATCCTCGT AAATGTCACCAAATCCCCCG 20 20 50.0 50.0 58.0 58.4 5.6 0.0 0.478138 73254 74073 920-936 1.000000 77.5 rpl20-rps12_p4 rpl20-rps12 4 AGTAAGTCTTGAATGCGCCC GAGGAACATGTACTCGGGTG 20 20 50.0 55.0 58.3 57.7 4.2 12.9 0.556186 73254 74073 938-954 1.000000 76.8 rpl20-rps12_p5 rpl20-rps12 5 AGTAAGTCTTGAATGCGCCC AGGAACATGTACTCGGGTGT 20 20 50.0 50.0 58.3 58.4 4.2 0.0 0.620017 73254 74073 937-953 1.000000 76.3 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CAGAGGATTAGAGCACGTGG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 57.8 58.0 18.9 0.0 0.218238 113964 114593 765-772 1.000000 79.6 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 GAACAGATCCAGTGGAGACG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 57.7 58.0 18.7 0.0 0.288158 113964 114593 802-809 1.000000 79.0 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 CAGAGGATTAGAGCACGTGG TGGGTTGAGAACGGGAATTG 20 20 55.0 50.0 57.8 58.1 18.9 0.0 0.311620 113964 114593 806-813 1.000000 78.8 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 TTTTAGGGTACTCCGGGGAA CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 57.7 58.0 9.3 0.0 0.343052 113964 114593 819-826 1.000000 78.5 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 TTTTTAGGGTACTCCGGGGA CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 57.7 58.0 9.3 0.0 0.343052 113964 114593 820-827 1.000000 78.5 ndhF-rpl32_p1 ndhF-rpl32 1 CTGCAAGTGTAACGAAGGGT TTTTTCCGATGTCAAGCCGA 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.235487 118523 119647 1285-1406 1.000000 84.7 ndhF-rpl32_p2 ndhF-rpl32 2 CGATGCAATAGGTCGTGTGA TTTTTCCGATGTCAAGCCGA 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.193197 118523 119647 1749-1870 1.000000 84.6 ndhF-rpl32_p3 ndhF-rpl32 3 TCGATGCAATAGGTCGTGTG TTTTTCCGATGTCAAGCCGA 20 20 50.0 45.0 58.1 58.1 6.6 0.0 0.193197 118523 119647 1750-1871 1.000000 84.6 ndhF-rpl32_p4 ndhF-rpl32 4 ATGGGTCAATCAAGTGTCCG TTTTTCCGATGTCAAGCCGA 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.228300 118523 119647 1507-1628 1.000000 84.6 ndhF-rpl32_p5 ndhF-rpl32 5 CGATGCAATAGGTCGTGTGA AAAAAGCTTTCAACGCGGTC 20 20 50.0 45.0 58.1 58.2 0.0 13.1 0.243636 118523 119647 1646-1767 1.000000 84.2 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ACCGCGTTGAAAGCTTTTTC AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.2 58.0 14.0 0.0 0.172709 119822 121186 1401-1504 1.000000 85.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GACCGCGTTGAAAGCTTTTT AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.2 58.0 14.0 0.0 0.172709 119822 121186 1402-1505 1.000000 85.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 ACCGCGTTGAAAGCTTTTTC CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.2 58.0 14.0 0.0 0.174080 119822 121186 1402-1505 1.000000 85.2 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GACCGCGTTGAAAGCTTTTT CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.2 58.0 14.0 0.0 0.174080 119822 121186 1403-1506 1.000000 85.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ACCGCGTTGAAAGCTTTTTC GCATCATTAACCACCGGGAT 20 20 45.0 50.0 58.2 58.0 14.0 6.3 0.183623 119822 121186 2007-2133 1.000000 84.5 ndhA_p1 ndhA 1 TTGTTTGAGACAAGACAGAA TGGGAGAAGTTGATCGTTGA 20 20 35.0 45.0 52.6 56.5 0.0 0.0 6.919120 127059 129364 2359-2365 1.000000 41.5 ndhA_p2 ndhA 2 TCTCTTGTTTTGTTTGAGACA TGGGAGAAGTTGATCGTTGA 21 20 33.3 45.0 53.5 56.5 0.0 0.0 6.986459 127059 129364 2368-2374 1.000000 41.5 ndhA_p3 ndhA 3 TCTCTTGTTTTGTTTGAGACAA TGGGAGAAGTTGATCGTTGA 22 20 31.8 45.0 54.4 56.5 0.0 0.0 7.137902 127059 129364 2368-2374 1.000000 41.5 ndhA_p4 ndhA 4 TGTTTGAGACAAGACAGAAT TGGGAGAAGTTGATCGTTGA 20 20 35.0 45.0 52.3 56.5 0.0 0.0 7.166422 127059 129364 2358-2364 1.000000 41.5 ndhA_p5 ndhA 5 TTCTCTTGTTTTGTTTGAGACA TGGGAGAAGTTGATCGTTGA 22 20 31.8 45.0 54.4 56.5 0.0 0.0 7.137902 127059 129364 2369-2375 1.000000 41.4