primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnS-GCU-trnR-UCU_p1 trnS-GCU-trnR-UCU 1 ATTAGCAATCCGCCGCTTTA AGAAGACCTCTGTCCTATCCA 20 21 45.0 47.6 58.0 56.9 0.0 0.0 2.089811 4811 5163 400-429 1.000000 70.2 trnS-GCU-trnR-UCU_p2 trnS-GCU-trnR-UCU 2 CGCATAACTCGTACAACGGA AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.1 56.9 0.0 0.0 2.152666 4811 5163 419-448 1.000000 69.5 trnS-GCU-trnR-UCU_p3 trnS-GCU-trnR-UCU 3 ATTAGCAATCCGCCGCTTTA AGGTTTAGAAGACCTCTGTCCT 20 22 45.0 45.5 58.0 57.9 0.0 0.0 2.173139 4811 5163 406-435 1.000000 69.5 trnS-GCU-trnR-UCU_p4 trnS-GCU-trnR-UCU 4 CGCATAACTCGTACAACGGA AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.1 57.9 0.0 0.0 2.235994 4811 5163 425-454 1.000000 68.8 trnS-GCU-trnR-UCU_p5 trnS-GCU-trnR-UCU 5 ACAAAACGGGAAAGAGAGGG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 57.7 56.9 0.0 0.0 2.323548 4811 5163 455-484 1.000000 68.0 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 GGTTCAAATCCTATTGGACGC ACGCTTTATATTTCAGGAAACA 21 22 47.6 31.8 57.3 54.1 0.0 0.0 7.586994 5236 5454 229-275 1.000000 50.7 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 GGTTCAAATCCTATTGGACGC AGAACGCTTTATATTTCAGGAAACA 21 25 47.6 32.0 57.3 57.3 0.0 0.0 7.374730 5236 5454 232-278 1.000000 50.6 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 GGTTCAAATCCTATTGGACGC GAACGCTTTATATTTCAGGAAACA 21 24 47.6 33.3 57.3 56.0 0.0 0.0 7.662880 5236 5454 231-277 1.000000 50.6 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 GGTTCAAATCCTATTGGACGC AGAACGCTTTATATTTCAGGAAACAA 21 26 47.6 30.8 57.3 57.9 0.0 0.0 7.799038 5236 5454 232-278 1.000000 50.6 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 TGGATAGGACAGAGGTCTTCT AGAACGCTTTATATTTCAGGAAACA 21 25 47.6 32.0 56.9 57.3 0.0 0.0 7.733544 5236 5454 267-313 1.000000 49.8 atpH-atpI_p1 atpH-atpI 1 AACGGAAGCAGCAGAAATCA TTTTGCAACTTTAGCTGCGG 20 20 45.0 45.0 58.1 57.9 0.0 0.0 0.236520 8833 9434 632-687 1.000000 82.7 atpH-atpI_p2 atpH-atpI 2 AACGGAAGCAGCAGAAATCA CACTCGAGGGCCATCATTAG 20 20 45.0 55.0 58.1 57.8 0.0 19.0 0.264603 8833 9434 597-652 1.000000 82.5 atpH-atpI_p3 atpH-atpI 3 AACGGAAGCAGCAGAAATCA TCACTCGAGGGCCATCATTA 20 20 45.0 50.0 58.1 58.2 0.0 19.0 0.315551 8833 9434 598-653 1.000000 82.1 atpH-atpI_p4 atpH-atpI 4 GAAGAAAGCCCTACAGCCAA TTTTGCAACTTTAGCTGCGG 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.333113 8833 9434 664-719 1.000000 81.9 atpH-atpI_p5 atpH-atpI 5 GAAGAAAGCCCTACAGCCAA CACTCGAGGGCCATCATTAG 20 20 50.0 55.0 57.8 57.8 0.0 19.0 0.361195 8833 9434 629-684 1.000000 81.7 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG ATTAAAGCAGCCCAAGCGAT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.314369 22007 22218 266-276 1.000000 81.0 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG TAAAGCAGCCCAAGCGATAC 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.418433 22007 22218 264-274 1.000000 80.2 trnC-GCA-petN_p3 trnC-GCA-petN 3 GTATCATTTTGGCGGCATGG ATTAAAGCAGCCCAAGCGAT 20 20 50.0 45.0 57.9 58.2 14.3 0.0 0.370837 22007 22218 318-328 1.000000 80.0 trnC-GCA-petN_p4 trnC-GCA-petN 4 TTTCCCCAGTTCAAATCCGG TTAAAGCAGCCCAAGCGATA 20 20 50.0 45.0 58.1 57.6 0.0 0.0 0.493756 22007 22218 265-275 1.000000 79.6 trnC-GCA-petN_p5 trnC-GCA-petN 5 GTATCATTTTGGCGGCATGG TAAAGCAGCCCAAGCGATAC 20 20 50.0 50.0 57.9 58.3 14.3 0.0 0.474902 22007 22218 316-326 1.000000 79.2 rps14-psaB_p1 rps14-psaB 1 ACTCAATGAGGGAACTTTGCT TTGATTGCCTCCACATCAGG 21 20 42.9 50.0 57.5 57.9 15.4 0.0 1.648883 29832 29976 290-292 1.000000 67.9 rps14-psaB_p2 rps14-psaB 2 CACTCAATGAGGGAACTTTGC TTGATTGCCTCCACATCAGG 21 20 47.6 50.0 57.4 57.9 15.4 0.0 1.699186 29832 29976 291-293 1.000000 67.5 rps14-psaB_p3 rps14-psaB 3 ACTCAATGAGGGAACTTTGCT GCTCTTTCCATTGTGCAAGC 21 20 42.9 50.0 57.5 58.3 15.4 0.0 1.809159 29832 29976 368-370 1.000000 66.4 rps14-psaB_p4 rps14-psaB 4 ACTCAATGAGGGAACTTTGCT TGGCTCTTTCCATTGTGCAA 21 20 42.9 45.0 57.5 58.3 15.4 0.0 1.813420 29832 29976 370-372 1.000000 66.4 rps14-psaB_p5 rps14-psaB 5 CACTCAATGAGGGAACTTTGC GCTCTTTCCATTGTGCAAGC 21 20 47.6 50.0 57.4 58.3 15.4 0.0 1.859462 29832 29976 369-371 1.000000 66.0 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT TGAGGCGCATAATTGGTTGA 20 20 50.0 45.0 57.9 57.9 4.1 10.8 0.236634 34460 35087 747-751 1.000000 79.9 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT TTGAAGATCACGAGGCGTTT 20 20 50.0 45.0 57.9 57.8 4.1 0.0 0.279161 34460 35087 731-735 1.000000 79.6 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT TTGGTTGAAGATCACGAGGC 20 20 50.0 50.0 57.9 58.2 4.1 0.0 0.306932 34460 35087 735-739 1.000000 79.4 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT TGAAGATCACGAGGCGTTTC 20 20 50.0 50.0 57.9 58.3 4.1 0.0 0.405330 34460 35087 730-734 1.000000 78.6 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT TCACGAGGCGTTTCGAATAA 20 20 50.0 45.0 57.9 57.6 4.1 15.7 0.466242 34460 35087 724-728 1.000000 78.1 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 CATTTATCCGCGATCTAGGCA GAATTGGGTGGGTGAAGTGT 21 20 47.6 50.0 58.0 58.0 8.2 0.0 1.045108 37093 37650 667-686 1.000000 75.3 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 CATTTATCCGCGATCTAGGCA GTGAATTGGGTGGGTGAAGT 21 20 47.6 50.0 58.0 58.0 8.2 0.0 1.045108 37093 37650 669-688 1.000000 75.3 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 CATTTATCCGCGATCTAGGCA CAGTGAATTGGGTGGGTGAA 21 20 47.6 50.0 58.0 58.0 8.2 0.0 1.046528 37093 37650 671-690 1.000000 75.3 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 CATTTATCCGCGATCTAGGCA TGAATTGGGTGGGTGAAGTG 21 20 47.6 50.0 58.0 58.0 8.2 0.0 1.046528 37093 37650 668-687 1.000000 75.3 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 CATTTATCCGCGATCTAGGCA CCCTCGGTAAACAAAAGCCT 21 20 47.6 50.0 58.0 58.1 8.2 0.0 1.134847 37093 37650 628-647 1.000000 74.8 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 AGTTAATCCCGGTAAAGCGC CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 58.3 57.9 0.0 0.0 0.472573 38563 38973 525-540 1.000000 79.1 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 AGTTAATCCCGGTAAAGCGC ATGGTCATCGGTTCGATTCC 20 20 50.0 50.0 58.3 57.8 0.0 0.0 0.580327 38563 38973 493-508 1.000000 78.4 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 AGTTAATCCCGGTAAAGCGC CCGCTTAGCTCAGAGGTTAG 20 20 50.0 55.0 58.3 57.5 0.0 7.6 0.840342 38563 38973 533-548 1.000000 76.1 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 AGTTAATCCCGGTAAAGCGC CAGAGGTTAGAGCATCGCAT 20 20 50.0 50.0 58.3 57.5 0.0 0.0 0.862669 38563 38973 523-538 1.000000 76.0 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 AGTTAATCCCGGTAAAGCGC TTAGGCGCGTATTATGTGGG 20 20 50.0 50.0 58.3 57.8 0.0 11.1 0.497668 38563 38973 573-573 0.500000 56.0 trnF-GAA-trnM-CAU_p1 trnF-GAA-trnM-CAU 1 CCTCGTGTCACCAGTTCAAA CGCCGTATGAAAGCAGTACT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129325 40420 40963 620-624 1.000000 82.7 trnF-GAA-trnM-CAU_p2 trnF-GAA-trnM-CAU 2 GGGGATATGGCGAAATTGGT CGCCGTATGAAAGCAGTACT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.082053 40420 40963 1278-1284 1.000000 82.0 trnF-GAA-trnM-CAU_p3 trnF-GAA-trnM-CAU 3 GGGGATATGGCGAAATTGGT TTGAGAATGCGCCTTAACGA 20 20 50.0 45.0 58.0 57.9 0.0 4.2 0.092125 40420 40963 1796-1808 1.000000 81.6 trnF-GAA-trnM-CAU_p4 trnF-GAA-trnM-CAU 4 GGGGATATGGCGAAATTGGT AAGAAGCCCGTCAAACTCTG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.120389 40420 40963 1672-1684 1.000000 81.5 trnF-GAA-trnM-CAU_p5 trnF-GAA-trnM-CAU 5 GGGGATATGGCGAAATTGGT CAAGAAGCCCGTCAAACTCT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.120389 40420 40963 1673-1685 1.000000 81.5 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 TACCAAACTGCGCTACATCC GTACTTAGTACTGGTGCCGC 20 20 50.0 55.0 58.0 58.1 9.7 14.6 0.099947 54012 54350 408-410 1.000000 81.4 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 TACCAAACTGCGCTACATCC ACGCATCTGGGAAAAATCGA 20 20 50.0 45.0 58.0 57.9 9.7 0.8 0.126492 54012 54350 470-472 1.000000 80.9 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 AAACAAACGCGCTACCAAAC GTACTTAGTACTGGTGCCGC 20 20 45.0 55.0 58.2 58.1 5.7 14.6 0.251319 54012 54350 420-422 1.000000 80.1 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 CAAAACAAACGCGCTACCAA GTACTTAGTACTGGTGCCGC 20 20 45.0 55.0 58.2 58.1 5.7 14.6 0.252574 54012 54350 422-424 1.000000 80.1 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 TTGTACCCAAAACAAACGCG GTACTTAGTACTGGTGCCGC 20 20 45.0 55.0 57.8 58.1 3.5 14.6 0.271730 54012 54350 429-431 1.000000 79.9 rpl20-rps12_p1 rpl20-rps12 1 TTTTGTTCTACGCCTCCGAG CGCCGAGGAACATGTACTAG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.195663 55913 56730 873-893 1.000000 81.1 rpl20-rps12_p2 rpl20-rps12 2 TCCTTGAATGAGCTCCTCGA CGCCGAGGAACATGTACTAG 20 20 50.0 55.0 58.1 57.9 12.1 0.0 0.268484 55913 56730 916-936 1.000000 80.4 rpl20-rps12_p3 rpl20-rps12 3 GAGCTCCTCGAAAACTTGCT CGCCGAGGAACATGTACTAG 20 20 50.0 55.0 58.2 57.9 0.9 0.0 0.319047 55913 56730 907-927 1.000000 80.0 rpl20-rps12_p4 rpl20-rps12 4 TCCTCGAAAACTTGCTGCAA CGCCGAGGAACATGTACTAG 20 20 45.0 55.0 58.3 57.9 15.2 0.0 0.446757 55913 56730 903-923 1.000000 79.0 rpl20-rps12_p5 rpl20-rps12 5 TTTTGTTCTACGCCTCCGAG GCCGAGGAACATGTACTAGG 20 20 50.0 55.0 57.9 57.5 0.0 19.0 0.585315 55913 56730 872-892 1.000000 77.9 petD-rpoA_p1 petD-rpoA 1 TACAACAGCCCTTTGGTTGG GAGCATTTTCGAATAGCAGATGT 20 23 50.0 39.1 58.3 57.6 8.4 16.1 3.716909 64758 65020 416-423 1.000000 53.1 petD-rpoA_p2 petD-rpoA 2 CGTCCAATAGCGACAACCAT GAGCATTTTCGAATAGCAGATGT 20 23 50.0 39.1 58.3 57.6 0.0 16.1 3.763427 64758 65020 451-458 1.000000 52.5 petD-rpoA_p3 petD-rpoA 3 TACAACAGCCCTTTGGTTGG AGCATTTTCGAATAGCAGATGT 20 22 50.0 36.4 58.3 56.5 8.4 16.1 3.807478 64758 65020 415-422 1.000000 52.4 petD-rpoA_p4 petD-rpoA 4 CGTCCAATAGCGACAACCAT AGCATTTTCGAATAGCAGATGT 20 22 50.0 36.4 58.3 56.5 0.0 16.1 3.853996 64758 65020 450-457 1.000000 51.8 petD-rpoA_p5 petD-rpoA 5 TACAACAGCCCTTTGGTTGG AGAGCATTTTCGAATAGCAGA 20 21 50.0 38.1 58.3 55.4 8.4 16.1 3.896168 64758 65020 417-424 1.000000 51.7 rps12-trnV-GAC_p1 rps12-trnV-GAC 1 TGGCAACTTTACGTAAGGCA GATGACTTCCACCACGTCAA 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.421509 83605 84880 1372-1593 1.000000 79.2 rps12-trnV-GAC_p2 rps12-trnV-GAC 2 TGGCAACTTTACGTAAGGCA AACTGATGACTTCCACCACG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 83605 84880 1376-1597 1.000000 79.2 rps12-trnV-GAC_p3 rps12-trnV-GAC 3 TGGCAACTTTACGTAAGGCA ATGACTTCCACCACGTCAAG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 83605 84880 1371-1592 1.000000 79.2 rps12-trnV-GAC_p4 rps12-trnV-GAC 4 TGGCAACTTTACGTAAGGCA CTGATGACTTCCACCACGTC 20 20 45.0 55.0 57.7 58.3 16.5 0.0 0.542896 83605 84880 1374-1595 1.000000 78.2 rps12-trnV-GAC_p5 rps12-trnV-GAC 5 ACGTAAGGCAGAGTTTGGTT GATGACTTCCACCACGTCAA 20 20 45.0 50.0 57.4 57.8 0.0 0.0 0.796805 83605 84880 1362-1583 1.000000 76.2 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TTGGTAAACACGCTGCTCTT TGTTCAAAAGTCGAAAACAGCA 20 22 45.0 36.4 58.0 57.6 0.0 0.0 2.465302 93045 93245 289-377 1.000000 63.6 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 AACACGCTGCTCTTAGGAAG TGTTCAAAAGTCGAAAACAGCA 20 22 50.0 36.4 57.9 57.6 0.0 0.0 2.513150 93045 93245 283-371 1.000000 63.3 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 AAAGGCCGCTATGGTGAAAT TGTTCAAAAGTCGAAAACAGCA 20 22 45.0 36.4 57.9 57.6 0.0 0.0 2.570971 93045 93245 308-396 1.000000 62.6 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 AAGGCCGCTATGGTGAAATT TGTTCAAAAGTCGAAAACAGCA 20 22 45.0 36.4 57.9 57.6 0.0 0.0 2.570971 93045 93245 307-395 1.000000 62.6 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 ATTGGTAAACACGCTGCTCT TGTTCAAAAGTCGAAAACAGCA 20 22 45.0 36.4 57.8 57.6 0.0 0.0 2.612100 93045 93245 290-378 1.000000 62.5 ycf1_p1 ycf1 1 TTCTGTCGCGCCTTACTTAG ACCAAAACACTTTTCCGGGA 20 20 50.0 45.0 57.7 57.9 0.0 0.0 0.420290 96478 96627 1086-1089 1.000000 78.5 ycf1_p2 ycf1 2 TCTGTCGCGCCTTACTTAGT ACCAAAACACTTTTCCGGGA 20 20 50.0 45.0 58.8 57.9 0.0 0.0 0.975612 96478 96627 1085-1088 1.000000 74.0 ycf1_p3 ycf1 3 CTGTCGCGCCTTACTTAGTA ACCAAAACACTTTTCCGGGA 20 20 50.0 45.0 57.2 57.9 0.0 0.0 0.985307 96478 96627 1084-1087 1.000000 74.0 ycf1_p4 ycf1 4 ATTCTGTCGCGCCTTACTTA ACCAAAACACTTTTCCGGGA 20 20 45.0 45.0 57.0 57.9 0.0 0.0 1.100386 96478 96627 1087-1090 1.000000 73.0 ycf1_p5 ycf1 5 TATTCTGTCGCGCCTTACTT ACCAAAACACTTTTCCGGGA 20 20 45.0 45.0 57.0 57.9 0.0 0.0 1.100386 96478 96627 1088-1091 1.000000 73.0 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 GATGACTTCCACCACGTCAA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.421509 107266 108541 1372-1593 1.000000 79.2 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 AACTGATGACTTCCACCACG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 107266 108541 1376-1597 1.000000 79.2 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 ATGACTTCCACCACGTCAAG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 107266 108541 1371-1592 1.000000 79.2 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 CTGATGACTTCCACCACGTC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.3 57.7 0.0 16.5 0.542896 107266 108541 1374-1595 1.000000 78.2 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 GATGACTTCCACCACGTCAA ACGTAAGGCAGAGTTTGGTT 20 20 50.0 45.0 57.8 57.4 0.0 0.0 0.796805 107266 108541 1362-1583 1.000000 76.2