feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG_part1 tRNA trnH-GUG trnH-GUG 1 71 -1 71 LSC 0.000000 0 0 80 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 72 344 0 273 LSC 0.011719 3 17 151 17 no 1.000000 2 1.000000 NA 0.937729 49.900000 psbA gene psbA psbA 345 1406 -1 1062 LSC 0.003766 4 0 45 300 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_002 igs psbA|matK psbA-matK 1407 1670 0 264 LSC 0.000000 0 9 300 125 no 1.000000 2 1.000000 NA 0.965909 50.200000 matK gene matK matK 1671 3230 -1 1560 LSC 0.002564 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.100000 IGS_003 igs matK|trnQ-UUG matK-trnQ-UUG 3231 3544 0 314 LSC 0.000000 0 5 300 254 no 1.000000 2 1.000000 NA 0.984076 54.300000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 3545 3616 -1 72 LSC 0.000000 0 0 300 182 no 0.000000 1 0.000000 NA 1.000000 32.400000 IGS_004 igs trnQ-UUG|psbK trnQ-UUG-psbK 3617 3937 0 321 LSC 0.007905 2 68 300 60 no 1.000000 2 1.000000 NA 0.788162 47.100000 psbK gene psbK psbK 3938 4126 1 189 LSC 0.005291 1 0 11 65 no 1.000000 2 1.000000 NA 1.000000 41.400000 IGS_005 igs psbK|psbI psbK-psbI 4127 4521 0 395 LSC 0.010959 4 30 128 300 no 1.000000 2 1.000000 NA 0.924051 59.400000 psbI gene psbI psbI 4522 4632 1 111 LSC 0.000000 0 0 84 300 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_006 igs psbI|trnS-GCU psbI-trnS-GCU 4633 4722 0 90 LSC 0.000000 0 0 195 300 no 0.000000 1 0.000000 NA 1.000000 33.400000 trnS-GCU tRNA trnS-GCU trnS-GCU 4723 4810 -1 88 LSC 0.000000 0 0 285 249 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_007 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 4811 5163 0 353 LSC 0.047170 15 35 300 159 yes 1.000000 2 1.000000 NA 0.900850 80.500000 trnR-UCU tRNA trnR-UCU trnR-UCU 5164 5235 1 72 LSC 0.000000 0 0 6 87 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_008 igs trnR-UCU|atpA trnR-UCU-atpA 5236 5454 0 219 LSC 0.125000 21 51 78 45 yes 1.000000 2 1.000000 NA 0.767123 75.100000 atpA gene atpA atpA 5455 6984 -1 1530 LSC 0.002614 4 0 20 300 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_009 igs atpA|atpF atpA-atpF 6985 7048 0 64 LSC 0.000000 0 0 15 300 no 0.000000 1 0.000000 NA 1.000000 19.900000 atpF gene atpF atpF 7049 8409 -1 1361 LSC 0.000000 0 1 79 300 no 1.000000 2 1.000000 NA 0.999265 49.700000 IGS_010 igs atpF|atpH atpF-atpH 8410 8586 0 177 LSC 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.994350 53.000000 atpH gene atpH atpH 8587 8832 -1 246 LSC 0.000000 0 0 300 226 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_011 igs atpH|atpI atpH-atpI 8833 9434 0 602 LSC 0.009709 5 87 300 300 yes 1.000000 2 1.000000 NA 0.855482 66.300000 atpI gene atpI atpI 9435 10178 -1 744 LSC 0.001344 1 0 218 200 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_012 igs atpI|rps2 atpI-rps2 10179 10453 0 275 LSC 0.003759 1 9 182 7 no 1.000000 2 1.000000 NA 0.967273 43.300000 rps2 gene rps2 rps2 10454 11164 -1 711 LSC 0.002813 2 0 74 29 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_013 igs rps2|rpoC2 rps2-rpoC2 11165 11377 0 213 LSC 0.023474 5 0 300 121 no 1.000000 2 1.000000 NA 1.000000 60.100000 rpoC2 gene rpoC2 rpoC2 11378 15490 -1 4113 LSC 0.003668 15 24 175 226 no 1.000000 2 1.000000 NA 0.994165 54.700000 IGS_014 igs rpoC2|rpoC1 rpoC2-rpoC1 15491 15647 0 157 LSC 0.000000 0 0 80 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 rpoC1 gene rpoC1 rpoC1 15648 18494 -1 2847 LSC 0.003875 11 8 237 118 no 1.000000 2 1.000000 NA 0.997190 52.300000 IGS_015 igs rpoC1|rpoB rpoC1-rpoB 18495 18499 0 5 LSC 0.000000 0 0 300 113 no 0.000000 1 0.000000 NA 1.000000 27.200000 rpoB gene rpoB rpoB 18500 21718 -1 3219 LSC 0.001864 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_016 igs rpoB|trnC-GCA rpoB-trnC-GCA 21719 21935 0 217 LSC 0.000000 0 3 300 116 no 1.000000 2 1.000000 NA 0.986175 47.500000 trnC-GCA tRNA trnC-GCA trnC-GCA 21936 22006 1 71 LSC 0.000000 0 0 300 45 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_017 igs trnC-GCA|petN trnC-GCA-petN 22007 22218 0 212 LSC 0.009901 2 10 300 300 yes 1.000000 2 1.000000 NA 0.952830 62.700000 petN gene petN petN 22219 22308 1 90 LSC 0.000000 0 0 126 300 no 0.000000 1 0.000000 NA 1.000000 28.200000 IGS_018 igs petN|psbM petN-psbM 22309 22630 0 322 LSC 0.000000 0 0 216 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 psbM gene psbM psbM 22631 22744 -1 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_019 igs psbM|trnD-GUC psbM-trnD-GUC 22745 23433 0 689 LSC 0.012469 5 288 300 300 no 1.000000 2 1.000000 NA 0.582003 60.000000 trnD-GUC tRNA trnD-GUC trnD-GUC 23434 23507 -1 74 LSC 0.000000 0 0 33 300 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_020 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 23508 23890 0 383 LSC 0.002660 1 7 107 300 no 1.000000 2 1.000000 NA 0.981723 50.500000 trnY-GUA tRNA trnY-GUA trnY-GUA 23891 23974 -1 84 LSC 0.000000 0 0 7 300 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_021 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 23975 24034 0 60 LSC 0.000000 0 0 91 241 no 0.000000 1 0.000000 NA 1.000000 25.600000 trnE-UUC tRNA trnE-UUC trnE-UUC 24035 24107 -1 73 LSC 0.000000 0 0 151 168 no 0.000000 1 0.000000 NA 1.000000 30.100000 IGS_022 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 24108 24372 0 265 LSC 0.007547 2 0 224 94 no 1.000000 2 1.000000 NA 1.000000 48.900000 trnT-GGU tRNA trnT-GGU trnT-GGU 24373 24444 1 72 LSC 0.000000 0 1 50 22 no 1.000000 2 1.000000 NA 0.986111 40.500000 IGS_023 igs trnT-GGU|psbD trnT-GGU-psbD 24445 25623 0 1179 LSC 0.004460 5 58 122 263 no 1.000000 2 1.000000 NA 0.950806 60.200000 psbD gene psbD psbD 25624 26685 1 1062 LSC 0.000942 1 0 144 10 no 1.000000 2 1.000000 NA 1.000000 45.000000 psbC gene psbC psbC 26669 28054 1 1386 LSC 0.002165 3 0 300 277 no 1.000000 2 1.000000 NA 1.000000 60.000000 IGS_025 igs psbC|trnS-UGA psbC-trnS-UGA 28055 28282 0 228 LSC 0.000000 0 1 300 49 no 1.000000 2 1.000000 NA 0.995614 41.600000 trnS-UGA tRNA trnS-UGA trnS-UGA 28283 28375 -1 93 LSC 0.010753 1 0 300 298 no 1.000000 2 1.000000 NA 1.000000 58.700000 IGS_026 igs trnS-UGA|psbZ trnS-UGA-psbZ 28376 28730 0 355 LSC 0.003077 1 30 43 300 no 1.000000 2 1.000000 NA 0.915493 47.500000 psbZ gene psbZ psbZ 28731 28919 1 189 LSC 0.000000 0 0 56 213 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_027 igs psbZ|trnG-GCC psbZ-trnG-GCC 28920 29178 0 259 LSC 0.004505 1 37 245 300 no 1.000000 2 1.000000 NA 0.857143 57.200000 trnG-GCC tRNA trnG-GCC trnG-GCC 29179 29249 1 71 LSC 0.000000 0 0 45 300 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_028 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 29250 29325 0 76 LSC 0.000000 0 0 116 300 no 0.000000 1 0.000000 NA 1.000000 27.400000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 29326 29399 -1 74 LSC 0.000000 0 0 192 300 no 0.000000 1 0.000000 NA 1.000000 33.100000 IGS_029 igs trnfM-CAU|rps14 trnfM-CAU-rps14 29400 29528 0 129 LSC 0.000000 0 0 266 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps14 gene rps14 rps14 29529 29831 -1 303 LSC 0.000000 0 0 300 39 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_030 igs rps14|psaB rps14-psaB 29832 29976 0 145 LSC 0.013986 2 2 300 270 yes 1.000000 2 1.000000 NA 0.986207 61.900000 psaB gene psaB psaB 29977 32181 -1 2205 LSC 0.001814 4 0 71 300 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_031 igs psaB|psaA psaB-psaA 32182 32206 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 32207 34459 -1 2253 LSC 0.002219 5 0 300 33 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_032 igs psaA|ycf3 psaA-ycf3 34460 35087 0 628 LSC 0.004886 3 14 218 300 yes 1.000000 2 1.000000 NA 0.977707 63.700000 ycf3 gene ycf3 ycf3 35088 37092 -1 2005 LSC 0.001502 3 7 245 235 no 1.000000 2 1.000000 NA 0.996509 58.900000 IGS_033 igs ycf3|trnS-GGA ycf3-trnS-GGA 37093 37650 0 558 LSC 0.022263 12 19 300 300 yes 1.000000 2 1.000000 NA 0.965950 73.900000 trnS-GGA tRNA trnS-GGA trnS-GGA 37651 37737 1 87 LSC 0.000000 0 0 62 300 no 0.000000 1 0.000000 NA 1.000000 23.400000 IGS_034 igs trnS-GGA|rps4 trnS-GGA-rps4 37738 37956 0 219 LSC 0.000000 0 17 149 243 no 1.000000 2 1.000000 NA 0.922374 52.700000 rps4 gene rps4 rps4 37957 38562 -1 606 LSC 0.001650 1 0 300 230 no 1.000000 2 1.000000 NA 1.000000 59.700000 IGS_035 igs rps4|trnT-UGU rps4-trnT-UGU 38563 38973 0 411 LSC 0.010101 4 15 300 249 yes 1.000000 2 1.000000 NA 0.963504 64.100000 trnT-UGU tRNA trnT-UGU trnT-UGU 38974 39046 -1 73 LSC 0.000000 0 0 116 176 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_036 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 39047 39721 0 675 LSC 0.004491 3 7 189 300 no 1.000000 2 1.000000 NA 0.989630 61.500000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 39722 39756 1 35 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 40042 40091 1 50 LSC 0.000000 0 0 300 230 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_039 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 40092 40346 0 255 LSC 0.004132 1 13 300 135 no 1.000000 2 1.000000 NA 0.949020 54.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 40347 40419 1 73 LSC 0.000000 0 0 24 62 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_040 igs trnF-GAA|trnM-CAU trnF-GAA-trnM-CAU 40420 40963 0 544 LSC 0.022727 12 16 97 1 yes 1.000000 2 1.000000 NA 0.970588 58.500000 trnM-CAU tRNA trnM-CAU trnM-CAU 40964 41036 1 73 LSC 0.013699 1 0 259 172 no 1.000000 2 1.000000 NA 1.000000 58.300000 IGS_041 igs trnM-CAU|atpE trnM-CAU-atpE 41037 41271 0 235 LSC 0.004367 1 6 71 20 no 1.000000 2 1.000000 NA 0.974468 44.000000 atpE gene atpE atpE 41272 41673 -1 402 LSC 0.004975 2 0 62 300 no 1.000000 2 1.000000 NA 1.000000 47.100000 atpB gene atpB atpB 41670 43166 -1 1497 LSC 0.000668 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_043 igs atpB|rbcL atpB-rbcL 43167 43911 0 745 LSC 0.001344 1 1 300 300 no 1.000000 2 1.000000 NA 0.998658 59.700000 rbcL gene rbcL rbcL 43912 45339 1 1428 LSC 0.000700 1 0 300 17 no 1.000000 2 1.000000 NA 1.000000 45.400000 IGS_044 igs rbcL|accD rbcL-accD 45340 45921 0 582 LSC 0.005376 3 24 129 43 no 1.000000 2 1.000000 NA 0.958763 53.700000 accD gene accD accD 45922 47313 1 1392 LSC 0.003592 5 0 92 19 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_045 igs accD|psaI accD-psaI 47314 47891 0 578 LSC 0.008651 5 0 126 300 no 1.000000 2 1.000000 NA 1.000000 57.700000 psaI gene psaI psaI 47892 48002 1 111 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_046 igs psaI|ycf4 psaI-ycf4 48003 48373 0 371 LSC 0.000000 0 33 300 300 no 1.000000 2 1.000000 NA 0.911051 57.700000 ycf4 gene ycf4 ycf4 48374 48934 1 561 LSC 0.000000 0 0 300 241 no 0.000000 1 0.000000 NA 1.000000 39.200000 IGS_047 igs ycf4|cemA ycf4-cemA 48935 49067 0 133 LSC 0.000000 0 8 300 108 no 1.000000 2 1.000000 NA 0.939850 50.200000 cemA gene cemA cemA 49068 49766 1 699 LSC 0.001431 1 0 300 68 no 1.000000 2 1.000000 NA 1.000000 49.700000 IGS_048 igs cemA|petA cemA-petA 49767 50010 0 244 LSC 0.036885 9 0 300 41 no 1.000000 2 1.000000 NA 1.000000 61.800000 petA gene petA petA 50011 50973 1 963 LSC 0.002077 2 0 78 154 no 1.000000 2 1.000000 NA 1.000000 50.800000 IGS_049 igs petA|psbJ petA-psbJ 50974 51550 0 577 LSC 0.005329 3 14 300 12 no 1.000000 2 1.000000 NA 0.975737 49.600000 psbJ gene psbJ psbJ 51551 51673 -1 123 LSC 0.008130 1 0 224 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_050 igs psbJ|psbL psbJ-psbL 51674 51815 0 142 LSC 0.000000 0 7 110 300 no 1.000000 2 1.000000 NA 0.950704 50.500000 psbL gene psbL psbL 51816 51932 -1 117 LSC 0.000000 0 0 252 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_051 igs psbL|psbF psbL-psbF 51933 51954 0 22 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbF gene psbF psbF 51955 52074 -1 120 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_052 igs psbF|psbE psbF-psbE 52075 52083 0 9 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 52084 52335 -1 252 LSC 0.000000 0 0 300 76 no 0.000000 1 0.000000 NA 1.000000 24.400000 IGS_053 igs psbE|petL psbE-petL 52336 53213 0 878 LSC 0.008000 4 378 300 300 no 1.000000 2 1.000000 NA 0.569476 57.500000 petL gene petL petL 53214 53309 1 96 LSC 0.000000 0 0 17 261 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_054 igs petL|petG petL-petG 53310 53475 0 166 LSC 0.000000 0 0 113 95 no 0.000000 1 0.000000 NA 1.000000 25.900000 petG gene petG petG 53476 53592 1 117 LSC 0.008547 1 0 279 37 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_055 igs petG|trnW-CCA petG-trnW-CCA 53593 53708 0 116 LSC 0.008621 1 0 21 300 no 1.000000 2 1.000000 NA 1.000000 44.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 53709 53782 -1 74 LSC 0.000000 0 0 78 262 no 0.000000 1 0.000000 NA 1.000000 24.600000 IGS_056 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 53783 53937 0 155 LSC 0.000000 0 22 152 107 no 1.000000 2 1.000000 NA 0.858065 47.800000 trnP-UGG tRNA trnP-UGG trnP-UGG 53938 54011 -1 74 LSC 0.000000 0 0 300 33 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_057 igs trnP-UGG|psaJ trnP-UGG-psaJ 54012 54350 0 339 LSC 0.012048 4 7 300 262 yes 1.000000 2 1.000000 NA 0.979351 62.200000 psaJ gene psaJ psaJ 54351 54482 1 132 LSC 0.000000 0 0 51 130 no 0.000000 1 0.000000 NA 1.000000 22.600000 IGS_058 igs psaJ|rpl33 psaJ-rpl33 54483 54623 0 141 LSC 0.007143 1 1 183 300 no 1.000000 2 1.000000 NA 0.992908 56.000000 rpl33 gene rpl33 rpl33 54624 54827 1 204 LSC 0.000000 0 0 10 200 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_059 igs rpl33|rps18 rpl33-rps18 54828 55081 0 254 LSC 0.004464 1 30 214 300 no 1.000000 2 1.000000 NA 0.881890 57.900000 rps18 gene rps18 rps18 55082 55381 1 300 LSC 0.000000 0 0 53 111 no 0.000000 1 0.000000 NA 1.000000 22.700000 IGS_060 igs rps18|rpl20 rps18-rpl20 55382 55558 0 177 LSC 0.005650 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.700000 rpl20 gene rpl20 rpl20 55559 55912 -1 354 LSC 0.000000 0 0 65 120 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_061 igs rpl20|rps12 rpl20-rps12 55913 56730 0 818 LSC 0.005044 4 25 300 177 yes 1.000000 2 1.000000 NA 0.969438 62.900000 rps12_part1 gene rps12 rps12 56731 56844 -1 114 LSC 0.000000 0 0 300 63 no 0.000000 1 0.000000 NA 1.000000 23.500000 IGS_062 igs rps12|clpP rps12-clpP 56845 56987 0 143 LSC 0.006993 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 clpP gene clpP clpP 56988 59051 -1 2064 LSC 0.005342 11 5 79 95 no 1.000000 2 1.000000 NA 0.997578 51.800000 IGS_063 igs clpP|psbB clpP-psbB 59052 59441 0 390 LSC 0.020566 8 1 92 29 no 1.000000 2 1.000000 NA 0.997436 53.600000 psbB gene psbB psbB 59442 60968 1 1527 LSC 0.003274 5 0 31 211 no 1.000000 2 1.000000 NA 1.000000 47.900000 IGS_064 igs psbB|psbT psbB-psbT 60969 61131 0 163 LSC 0.000000 0 0 291 48 no 0.000000 1 0.000000 NA 1.000000 22.400000 psbT gene psbT psbT 61132 61239 1 108 LSC 0.009259 1 0 300 59 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_065 igs psbT|psbN psbT-psbN 61240 61298 0 59 LSC 0.000000 0 0 59 0 no 0.000000 1 0.000000 NA 1.000000 18.800000 psbN gene psbN psbN 61299 61430 -1 132 LSC 0.007576 1 0 118 298 no 1.000000 2 1.000000 NA 1.000000 50.700000 IGS_066 igs psbN|psbH psbN-psbH 61431 61528 0 98 LSC 0.000000 0 0 131 200 no 0.000000 1 0.000000 NA 1.000000 28.600000 psbH gene psbH psbH 61529 61750 1 222 LSC 0.004505 1 0 229 300 no 1.000000 2 1.000000 NA 1.000000 55.100000 IGS_067 igs psbH|petB psbH-petB 61751 61881 0 131 LSC 0.000000 0 0 21 300 no 0.000000 1 0.000000 NA 1.000000 20.300000 petB gene petB petB 61882 63335 1 1454 LSC 0.005751 8 63 152 29 no 1.000000 2 1.000000 NA 0.956671 53.400000 IGS_068 igs petB|petD petB-petD 63336 63535 0 200 LSC 0.005000 1 0 300 175 no 1.000000 2 1.000000 NA 1.000000 53.500000 petD gene petD petD 63536 64757 1 1222 LSC 0.004132 5 12 170 86 no 1.000000 2 1.000000 NA 0.990180 53.500000 IGS_069 igs petD|rpoA petD-rpoA 64758 65020 0 263 LSC 0.031250 8 7 257 259 yes 1.000000 2 1.000000 NA 0.973384 72.900000 rpoA gene rpoA rpoA 65021 66028 -1 1008 LSC 0.003968 4 0 48 300 no 1.000000 2 1.000000 NA 1.000000 49.600000 IGS_070 igs rpoA|rps11 rpoA-rps11 66029 66093 0 65 LSC 0.000000 0 0 125 300 no 0.000000 1 0.000000 NA 1.000000 28.100000 rps11 gene rps11 rps11 66094 66510 -1 417 LSC 0.000000 0 0 190 300 no 0.000000 1 0.000000 NA 1.000000 35.400000 IGS_071 igs rps11|rpl36 rps11-rpl36 66511 66696 0 186 LSC 0.000000 0 0 300 133 no 0.000000 1 0.000000 NA 1.000000 28.700000 rpl36 gene rpl36 rpl36 66697 66810 -1 114 LSC 0.000000 0 0 300 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_072 igs rpl36|infA rpl36-infA 66811 66985 0 175 LSC 0.011429 2 0 300 3 no 1.000000 2 1.000000 NA 1.000000 44.300000 infA gene infA infA 66986 67197 -1 212 LSC 0.009804 2 8 85 11 no 1.000000 2 1.000000 NA 0.962264 47.600000 IGS_073 igs infA|rps8 infA-rps8 67198 67335 0 138 LSC 0.007576 1 6 166 112 no 1.000000 2 1.000000 NA 0.956522 54.400000 rps8 gene rps8 rps8 67336 67743 -1 408 LSC 0.002451 1 0 126 300 no 1.000000 2 1.000000 NA 1.000000 50.600000 IGS_074 igs rps8|rpl14 rps8-rpl14 67744 67873 0 130 LSC 0.000000 0 11 295 300 no 1.000000 2 1.000000 NA 0.915385 56.400000 rpl14 gene rpl14 rpl14 67874 68242 -1 369 LSC 0.000000 0 0 300 57 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_075 igs rpl14|rpl16 rpl14-rpl16 68243 68295 0 53 LSC 0.000000 0 0 300 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 rpl16 gene rpl16 rpl16 68296 69579 -1 1284 LSC 0.007103 9 17 300 55 no 1.000000 2 1.000000 NA 0.986760 53.200000 IGS_076 igs rpl16|rps3 rpl16-rps3 69580 69685 0 106 LSC 0.018868 2 0 72 18 no 1.000000 2 1.000000 NA 1.000000 49.700000 rps3 gene rps3 rps3 69686 70342 -1 657 LSC 0.010654 7 0 24 155 no 1.000000 2 1.000000 NA 1.000000 51.700000 rpl22 gene rpl22 rpl22 70327 70809 -1 483 LSC 0.006211 3 0 76 118 no 1.000000 2 1.000000 NA 1.000000 50.600000 IGS_078 igs rpl22|rps19 rpl22-rps19 70810 70861 0 52 LSC 0.000000 0 6 273 66 no 1.000000 2 1.000000 NA 0.884615 45.500000 rps19 gene rps19 rps19 70862 71143 -1 282 LSC 0.010638 3 0 300 38 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_079 igs rps19|rpl2 rps19-rpl2 71144 71250 0 107 LSC 0.009346 1 0 64 17 no 1.000000 2 1.000000 NA 1.000000 44.100000 rpl2 gene rpl2 rpl2 71251 72730 -1 1480 IRb 0.002027 3 0 68 300 no 1.000000 2 1.000000 NA 1.000000 50.000000 IGS_080 igs rpl2|rpl23 rpl2-rpl23 72731 72753 0 23 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 72754 73035 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_081 igs rpl23|trnI-CAU rpl23-trnI-CAU 73036 73200 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 73201 73274 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_082 igs trnI-CAU|ycf2 trnI-CAU-ycf2 73275 73379 0 105 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 73380 80024 1 6645 IRb 0.001059 7 36 300 300 no 1.000000 2 1.000000 NA 0.994582 53.600000 IGS_083 igs ycf2|ycf15 ycf2-ycf15 80025 80143 0 119 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf15 gene ycf15 ycf15 80144 80392 1 249 IRb 0.000000 0 7 300 300 no 1.000000 2 1.000000 NA 0.971888 55.200000 IGS_084 igs ycf15|trnL-CAA ycf15-trnL-CAA 80393 80902 0 510 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.100000 trnL-CAA tRNA trnL-CAA trnL-CAA 80903 80983 -1 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_085 igs trnL-CAA|rps7 trnL-CAA-rps7 80984 82287 0 1304 IRb 0.000000 0 12 300 300 no 1.000000 2 1.000000 NA 0.990798 59.600000 rps7 gene rps7 rps7 82288 82755 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_086 igs rps7|rps12 rps7-rps12 82756 82811 0 56 IRb 0.000000 0 9 300 300 no 1.000000 2 1.000000 NA 0.839286 54.200000 rps12_part2 gene rps12 rps12 82812 83604 -1 793 IRb 0.000000 0 0 300 221 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_087 igs rps12|trnV-GAC rps12-trnV-GAC 83605 84880 0 1276 IRb 0.022293 28 20 300 300 yes 1.000000 2 1.000000 NA 0.984326 73.000000 trnV-GAC tRNA trnV-GAC trnV-GAC 84881 84952 1 72 IRb 0.000000 0 0 44 300 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_088 igs trnV-GAC|rrn16 trnV-GAC-rrn16 84953 85161 0 209 IRb 0.000000 0 1 116 300 no 1.000000 2 1.000000 NA 0.995215 46.700000 rrn16 rRNA rrn16 rrn16 85162 86646 1 1485 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_089 igs rrn16|rrn23 rrn16-rrn23 86647 87637 0 991 IRb 0.001032 1 22 300 300 no 1.000000 2 1.000000 NA 0.977800 61.500000 rrn23 rRNA rrn23 rrn23 87638 90444 1 2807 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_090 igs rrn23|rrn4.5 rrn23-rrn4.5 90445 90544 0 100 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 90545 90647 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_091 igs rrn4.5|rrn5 rrn4.5-rrn5 90648 90856 0 209 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 90857 90977 1 121 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_092 igs rrn5|trnR-ACG rrn5-trnR-ACG 90978 91198 0 221 IRb 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.995475 52.900000 trnR-ACG tRNA trnR-ACG trnR-ACG 91199 91272 1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_093 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 91273 91709 0 437 IRb 0.009153 4 0 300 236 no 1.000000 2 1.000000 NA 1.000000 60.600000 trnN-GUU tRNA trnN-GUU trnN-GUU 91710 91781 -1 72 IRb 0.000000 0 0 19 164 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_094 igs trnN-GUU|ycf1 trnN-GUU-ycf1 91782 92076 0 295 IRb 0.003401 1 1 91 300 no 1.000000 2 1.000000 NA 0.996610 46.600000 ycf1 gene ycf1 ycf1 92077 92982 1 906 IRb 0.001104 1 0 130 122 no 1.000000 2 1.000000 NA 1.000000 53.500000 trnL-UAG tRNA trnL-UAG trnL-UAG 92965 93044 1 80 SSC 0.000000 0 0 300 60 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_096 igs trnL-UAG|ccsA trnL-UAG-ccsA 93045 93245 0 201 SSC 0.041026 8 6 300 206 yes 1.000000 2 1.000000 NA 0.970149 78.800000 ccsA gene ccsA ccsA 93246 94214 1 969 SSC 0.006231 6 6 50 178 no 1.000000 2 1.000000 NA 0.993808 51.700000 IGS_097 igs ccsA|psaC ccsA-psaC 94215 94613 0 399 SSC 0.017995 7 10 24 300 no 1.000000 2 1.000000 NA 0.974937 54.100000 psaC gene psaC psaC 94614 94859 -1 246 SSC 0.000000 0 0 10 98 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_098 igs psaC|ycf1 psaC-ycf1 94860 95230 0 371 SSC 0.016340 5 65 256 14 no 1.000000 2 1.000000 NA 0.824798 50.400000 ycf1 gene ycf1 ycf1 95231 100069 -1 4839 SSC 0.007660 37 9 144 130 yes 1.000000 2 1.000000 NA 0.998140 52.100000 IGS_099 igs ycf1|trnN-GUU ycf1-trnN-GUU 100070 100364 0 295 IRa 0.003401 1 1 300 91 no 1.000000 2 1.000000 NA 0.996610 46.600000 trnN-GUU tRNA trnN-GUU trnN-GUU 100365 100436 1 72 IRa 0.000000 0 0 164 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_100 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 100437 100873 0 437 IRa 0.009153 4 0 236 300 no 1.000000 2 1.000000 NA 1.000000 60.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 100874 100947 -1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_101 igs trnR-ACG|rrn5 trnR-ACG-rrn5 100948 101168 0 221 IRa 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.995475 52.900000 rrn5 rRNA rrn5 rrn5 101169 101289 -1 121 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_102 igs rrn5|rrn4.5 rrn5-rrn4.5 101290 101498 0 209 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 101499 101601 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_103 igs rrn4.5|rrn23 rrn4.5-rrn23 101602 101701 0 100 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 101702 104508 -1 2807 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_104 igs rrn23|rrn16 rrn23-rrn16 104509 105499 0 991 IRa 0.001032 1 22 300 300 no 1.000000 2 1.000000 NA 0.977800 61.500000 rrn16 rRNA rrn16 rrn16 105500 106984 -1 1485 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_105 igs rrn16|trnV-GAC rrn16-trnV-GAC 106985 107193 0 209 IRa 0.000000 0 1 300 116 no 1.000000 2 1.000000 NA 0.995215 46.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 107194 107265 -1 72 IRa 0.000000 0 0 300 44 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_106 igs trnV-GAC|rps12 trnV-GAC-rps12 107266 108541 0 1276 IRa 0.022293 28 20 300 300 yes 1.000000 2 1.000000 NA 0.984326 73.000000 rps12_part2 gene rps12 rps12 108542 109334 1 793 IRa 0.000000 0 0 221 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_107 igs rps12|rps7 rps12-rps7 109335 109390 0 56 IRa 0.000000 0 9 300 300 no 1.000000 2 1.000000 NA 0.839286 54.200000 rps7 gene rps7 rps7 109391 109858 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_108 igs rps7|trnL-CAA rps7-trnL-CAA 109859 111162 0 1304 IRa 0.000000 0 12 300 300 no 1.000000 2 1.000000 NA 0.990798 59.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 111163 111243 1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_109 igs trnL-CAA|ycf15 trnL-CAA-ycf15 111244 111753 0 510 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.100000 ycf15 gene ycf15 ycf15 111754 112003 -1 250 IRa 0.000000 0 7 300 300 no 1.000000 2 1.000000 NA 0.972000 55.200000 IGS_110 igs ycf15|ycf2 ycf15-ycf2 112004 112121 0 118 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 112122 118766 -1 6645 IRa 0.001059 7 36 300 300 no 1.000000 2 1.000000 NA 0.994582 53.600000 IGS_111 igs ycf2|trnI-CAU ycf2-trnI-CAU 118767 118871 0 105 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 118872 118945 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_112 igs trnI-CAU|rpl23 trnI-CAU-rpl23 118946 119110 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 119111 119392 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_113 igs rpl23|rpl2 rpl23-rpl2 119393 119416 0 24 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 119417 120657 1 1241 IRa 0.000826 1 31 300 112 no 1.000000 2 1.000000 NA 0.975020 55.000000 trnH-GUG_part2 tRNA trnH-GUG trnH-GUG 120656 120658 -1 3 IRa NA 0 3 77 111 no 1.000000 2 1.000000 NA 0.000000 30.800000