primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 78 737 730-799 1.000000 79.6 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.208010 78 737 744-813 1.000000 79.6 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 78 737 743-812 1.000000 79.6 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 78 737 745-814 1.000000 79.6 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG CCGTGCTAACCTTGGTATGG 20 20 55.0 55.0 58.1 58.3 0.0 0.0 0.465225 78 737 779-848 1.000000 77.5 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AGTGGTGGGTTTTGACATCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.080725 6760 7452 784-805 1.000000 82.7 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TGCTTTCTACCACAGCGTTT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.0 58.1 0.0 16.9 0.114308 6760 7452 734-755 1.000000 82.6 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 TTGCTTTCTACCACAGCGTT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.0 58.1 0.0 16.9 0.114308 6760 7452 735-756 1.000000 82.6 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6760 7452 745-766 1.000000 81.8 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 TTTTGACATCCACAGCCGAT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.8 58.1 0.0 16.9 0.274928 6760 7452 775-796 1.000000 81.2 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 GGTTCAAATCCTATTGGACGC GTTTTCGACTTCAGGAACAA 21 20 47.6 40.0 57.3 54.1 0.0 0.0 5.597386 10977 11255 308-324 1.000000 47.0 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 GGTTCAAATCCTATTGGACGC GTTTTCGACTTCAGGAACAAT 21 21 47.6 38.1 57.3 54.7 0.0 0.0 5.975046 10977 11255 308-324 1.000000 47.0 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 GTTCAAATCCTATTGGACGCA GTTTTCGACTTCAGGAACAA 21 20 42.9 40.0 56.6 54.1 0.0 0.0 6.300329 10977 11255 307-323 1.000000 47.0 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 TGGATAGGACAGAGGTCTTCT GTTTTCGACTTCAGGAACAA 21 20 47.6 40.0 56.9 54.1 0.0 0.0 5.956199 10977 11255 343-359 1.000000 46.4 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 ATGAAAAGCGTCCATTGTCT GTTTTCGACTTCAGGAACAA 20 20 40.0 40.0 55.6 54.1 0.0 0.0 6.259203 10977 11255 365-381 1.000000 46.0 trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 CGGTGCTCTGACCAATTGAA TGGCAATATGTCTACGCTGG 20 20 50.0 50.0 58.5 57.8 7.1 0.0 0.716274 32630 33116 557-557 1.000000 76.1 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 CGGTGCTCTGACCAATTGAA GGCAATATGTCTACGCTGGT 20 20 50.0 50.0 58.5 57.8 7.1 0.0 0.717825 32630 33116 556-556 1.000000 76.1 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 CGGTGCTCTGACCAATTGAA GGGGACGGACTGTAAATTCG 20 20 50.0 55.0 58.5 58.4 7.1 0.0 0.828828 32630 33116 578-578 1.000000 75.2 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 CGGTGCTCTGACCAATTGAA GGGACGGACTGTAAATTCGT 20 20 50.0 50.0 58.5 57.6 7.1 0.0 0.852505 32630 33116 577-577 1.000000 75.0 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 CGGTGCTCTGACCAATTGAA GATTCTTCCTGGGTCGATGC 20 20 50.0 55.0 58.5 58.4 7.1 0.0 0.889785 32630 33116 611-611 1.000000 74.6 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AGAGATGTCCTGAACCGCTA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 33333 34406 1150-1161 1.000000 80.8 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 33333 34406 1148-1159 1.000000 80.8 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 33333 34406 1204-1215 1.000000 80.6 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 CGTTGCCTCCTTGAAAGAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.175803 33333 34406 1167-1178 1.000000 80.6 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 AGATGTCCTGAACCGCTAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 33333 34406 1127-1138 1.000000 80.4 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 51171 52610 1413-1490 1.000000 84.3 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 51171 52610 1421-1498 1.000000 83.8 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 51171 52610 1445-1522 1.000000 83.4 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG CCAAGGCTCAATCCAATCCA 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.281186 51171 52610 1451-1528 1.000000 83.1 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG ACCAAGGCTCAATCCAATCC 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.282713 51171 52610 1452-1529 1.000000 83.1 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GGACCCTTTCTAATCGGAGC TGGGTCTTTGAAATGGGTCG 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.337760 55958 57318 1560-1565 1.000000 79.6 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGACCCTTTCTAATCGGAGC GGGTCTTTGAAATGGGTCGA 20 20 55.0 50.0 57.8 57.8 0.0 0.0 0.436248 55958 57318 1559-1564 1.000000 78.8 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GGACCCTTTCTAATCGGAGC AATGCGTGTTGGGTCTTTGA 20 20 55.0 45.0 57.8 58.3 0.0 0.0 0.555692 55958 57318 1569-1574 1.000000 77.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGACCCTTTCTAATCGGAGC ATGCGTGTTGGGTCTTTGAA 20 20 55.0 45.0 57.8 58.3 0.0 0.0 0.555692 55958 57318 1568-1573 1.000000 77.8 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGACCCTTTCTAATCGGAGC TCTGTTTTACCGAGAAGGCC 20 20 55.0 50.0 57.8 57.5 0.0 0.0 0.709613 55958 57318 1514-1519 1.000000 76.7 rbcL-accD_p1 rbcL-accD 1 TTGAATGCTACTGCGGGTAC AGCCGGATCTTCGTTTACAC 20 20 50.0 50.0 58.0 58.0 0.0 5.0 0.024512 62862 63683 1674-1723 1.000000 81.4 rbcL-accD_p2 rbcL-accD 2 TTGAATGCTACTGCGGGTAC GCCGGATCTTCGTTTACACT 20 20 50.0 50.0 58.0 58.0 0.0 5.0 0.024512 62862 63683 1673-1722 1.000000 81.4 rbcL-accD_p3 rbcL-accD 3 TTGAATGCTACTGCGGGTAC TAGAGCTGTCACTCCAACCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.028223 62862 63683 1720-1769 1.000000 81.3 rbcL-accD_p4 rbcL-accD 4 TTGAATGCTACTGCGGGTAC ACCATTTCCACCTTCACCAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023166 62862 63683 2106-2106 0.500000 59.8 rbcL-accD_p5 rbcL-accD 5 TTGAATGCTACTGCGGGTAC CCATTTCCACCTTCACCACA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024586 62862 63683 2105-2105 0.500000 59.8 accD_p1 accD 1 CCAGGATTCTCCCAAACGAG GCGGGCTTTGACTTTGATTC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.047226 63684 65636 2294-2458 1.000000 82.6 accD_p2 accD 2 CTCCAGGATTCTCCCAAACG GCGGGCTTTGACTTTGATTC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.047226 63684 65636 2296-2460 1.000000 82.5 accD_p3 accD 3 CCAGGATTCTCCCAAACGAG CCATTGCAATTGCCGGAAAT 20 20 55.0 45.0 58.0 58.0 0.0 26.9 0.056842 63684 65636 2880-2880 0.500000 59.5 accD_p4 accD 4 CTCCAGGATTCTCCCAAACG CCATTGCAATTGCCGGAAAT 20 20 55.0 45.0 58.0 58.0 0.0 26.9 0.056842 63684 65636 2882-2882 0.500000 59.5 accD_p5 accD 5 CCAGGATTCTCCCAAACGAG GAGGGAAAGCTGCTGAAAGT 20 20 55.0 50.0 58.0 58.1 0.0 1.4 0.126900 63684 65636 2833-2833 0.500000 59.0 petA-psbJ_p1 petA-psbJ 1 CTACGTGTCCAAGGCCTTTT ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 58.1 57.6 17.6 0.0 0.527849 70233 71377 1285-1294 1.000000 76.6 petA-psbJ_p2 petA-psbJ 2 GGCCTTTTGTTCTTCTTGGC ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.574912 70233 71377 1273-1282 1.000000 76.3 petA-psbJ_p3 petA-psbJ 3 GATCCACTACGTGTCCAAGG ATTCTGGATTGGGTTCGTCC 20 20 55.0 50.0 57.7 57.6 0.0 0.0 0.715311 70233 71377 1291-1300 1.000000 75.1 petA-psbJ_p4 petA-psbJ 4 TACGTGTCCAAGGCCTTTTG ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 58.4 57.6 17.6 0.0 0.820035 70233 71377 1284-1293 1.000000 74.3 petA-psbJ_p5 petA-psbJ 5 TGTCCAAGGCCTTTTGTTCT ATTCTGGATTGGGTTCGTCC 20 20 45.0 50.0 57.5 57.6 17.6 0.0 0.872659 70233 71377 1280-1289 1.000000 73.9 clpP1_p1 clpP1 1 TACGACGTAACCGACTACGA TATGCACACGATACCAAGGC 20 20 50.0 50.0 58.0 58.1 19.0 0.0 0.066561 77803 78540 1641-1947 1.000000 84.5 clpP1_p2 clpP1 2 CGTTTACGACGTAACCGACT TATGCACACGATACCAAGGC 20 20 50.0 50.0 58.0 58.1 27.1 0.0 0.101424 77803 78540 1645-1951 1.000000 84.2 clpP1_p3 clpP1 3 TACGACGTAACCGACTACGA GGAGGGATCAAAAACAGCCA 20 20 50.0 50.0 58.0 58.1 19.0 0.0 0.091310 77803 78540 1757-2063 1.000000 84.0 clpP1_p4 clpP1 4 TACGACGTAACCGACTACGA GAACATGCCTTGTCTCCACA 20 20 50.0 50.0 58.0 58.1 19.0 0.0 0.118446 77803 78540 1796-2102 1.000000 83.7 clpP1_p5 clpP1 5 GGAAAGAAGACGAAGCGACT TATGCACACGATACCAAGGC 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.119310 77803 78540 1321-1321 0.500000 59.0 clpP1-psbB_p1 clpP1-psbB 1 TCACGAAAATGACTAGCGGG CAGATAGCTGCCAAGAAGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038687 78541 79057 1256-1347 1.000000 85.2 clpP1-psbB_p2 clpP1-psbB 2 TCACGAAAATGACTAGCGGG AGGTTGTACCCTTCCGGTTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.033144 78541 79057 1458-1549 1.000000 84.6 clpP1-psbB_p3 clpP1-psbB 3 TCACGAAAATGACTAGCGGG ACACCCATATTCCAGGACCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024773 78541 79057 1423-1423 0.500000 59.8 clpP1-psbB_p4 clpP1-psbB 4 GTTGTCGGTAAAGCACGTTG ACACCCATATTCCAGGACCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.033476 78541 79057 1113-1113 0.500000 59.7 clpP1-psbB_p5 clpP1-psbB 5 GCCATTGAAGCAACCAATCC ACACCCATATTCCAGGACCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.034526 78541 79057 1330-1330 0.500000 59.7 rps8-rpl14_p1 rps8-rpl14 1 ATGCGAACCGTTCCTTTTCT GCTCGGGAATTGAGACAGTT 20 20 45.0 50.0 58.1 57.9 5.7 0.0 0.208395 87342 87516 315-322 1.000000 80.6 rps8-rpl14_p2 rps8-rpl14 2 ATGCGAACCGTTCCTTTTCT AATTTTTGGTGCGATCGCTC 20 20 45.0 45.0 58.1 57.7 5.7 37.0 0.370363 87342 87516 331-338 1.000000 79.2 rps8-rpl14_p3 rps8-rpl14 3 ATGCGAACCGTTCCTTTTCT GAATTTTTGGTGCGATCGCT 20 20 45.0 45.0 58.1 57.7 5.7 37.0 0.370363 87342 87516 332-339 1.000000 79.2 rps8-rpl14_p4 rps8-rpl14 4 ATGCGAACCGTTCCTTTTCT GATCGCTCGGGAATTGAGAC 20 20 45.0 55.0 58.1 58.5 5.7 0.0 0.615070 87342 87516 319-326 1.000000 77.3 rps8-rpl14_p5 rps8-rpl14 5 ATGCGAACCGTTCCTTTTCT TCGAATTTTTGGTGCGATCG 20 20 45.0 45.0 58.1 57.5 5.7 11.7 0.626793 87342 87516 334-341 1.000000 77.1 rpl22-rps19_p1 rpl22-rps19 1 AGTTGGATATGGGTTCCTCCT ACGGATCGTATGGTAGGACA 21 20 47.6 50.0 57.8 57.6 0.0 0.0 1.504899 90875 90950 211-211 1.000000 68.7 rpl22-rps19_p2 rpl22-rps19 2 AGTTGGATATGGGTTCCTCCT TTGGGAGAATTCGCACCTAC 21 20 47.6 50.0 57.8 57.6 0.0 9.1 1.548132 90875 90950 187-187 1.000000 68.5 rpl22-rps19_p3 rpl22-rps19 3 AGTTGGATATGGGTTCCTCCT TGGGAGAATTCGCACCTACT 21 20 47.6 50.0 57.8 58.4 0.0 9.1 1.583038 90875 90950 186-186 1.000000 68.2 rpl22-rps19_p4 rpl22-rps19 4 AGTTGGATATGGGTTCCTCCT AATTGGGAGAATTCGCACCT 21 20 47.6 45.0 57.8 57.5 0.0 9.1 1.666000 90875 90950 189-189 1.000000 67.5 rpl22-rps19_p5 rpl22-rps19 5 GTTGGATATGGGTTCCTCCT ACGGATCGTATGGTAGGACA 20 20 50.0 50.0 56.3 57.6 0.0 0.0 2.080359 90875 90950 210-210 1.000000 64.1 rpl23-trnI-CAU_p1 rpl23-trnI-CAU 1 CCTAGTTGATCCTGATTCGACA GAATGGTTAAAGCGCCCAAC 22 20 45.5 50.0 57.3 58.0 0.0 2.3 2.664963 93067 93691 567-783 1.000000 66.1 rpl23-trnI-CAU_p2 rpl23-trnI-CAU 2 TGTCCTAGTTGATCCTGATTCG GAATGGTTAAAGCGCCCAAC 22 20 45.5 50.0 57.3 58.0 0.0 2.3 2.664963 93067 93691 570-786 1.000000 66.1 rpl23-trnI-CAU_p3 rpl23-trnI-CAU 3 CGACCCAATGCTTTATTTCTGT GAATGGTTAAAGCGCCCAAC 22 20 40.9 50.0 57.3 58.0 0.0 2.3 2.711157 93067 93691 589-805 1.000000 65.6 rpl23-trnI-CAU_p4 rpl23-trnI-CAU 4 GTCCTAGTTGATCCTGATTCGA GAATGGTTAAAGCGCCCAAC 22 20 45.5 50.0 57.1 58.0 0.0 2.3 2.929840 93067 93691 569-785 1.000000 64.0 rpl23-trnI-CAU_p5 rpl23-trnI-CAU 5 TCCTAGTTGATCCTGATTCGAC GAATGGTTAAAGCGCCCAAC 22 20 45.5 50.0 57.1 58.0 0.0 2.3 2.929840 93067 93691 568-784 1.000000 64.0 trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 ACGACCAGTCAGTTAACAGC GGGAAGCCGCATCTCTTTTT 20 20 50.0 50.0 57.8 58.8 8.6 0.0 0.972996 116861 117587 846-946 1.000000 76.6 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 AGGATTCGAACCTACGACCA GGGAAGCCGCATCTCTTTTT 20 20 50.0 50.0 58.2 58.8 15.0 0.0 0.979231 116861 117587 859-959 1.000000 76.5 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 GGATTCGAACCTACGACCAG GGGAAGCCGCATCTCTTTTT 20 20 55.0 50.0 57.8 58.8 0.0 0.0 1.027906 116861 117587 858-958 1.000000 76.1 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 ACGACCAGTCAGTTAACAGC AAATATGTAGGGGGAAGCCG 20 20 50.0 50.0 57.8 57.0 8.6 0.0 1.101626 116861 117587 857-957 1.000000 75.5 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 AGGATTCGAACCTACGACCA AAATATGTAGGGGGAAGCCG 20 20 50.0 50.0 58.2 57.0 15.0 0.0 1.107861 116861 117587 870-970 1.000000 75.4 trnI-CAU-rpl23_p1 trnI-CAU-rpl23 1 GAATGGTTAAAGCGCCCAAC CCTAGTTGATCCTGATTCGACA 20 22 50.0 45.5 58.0 57.3 2.3 0.0 2.664963 160937 161561 783-802 1.000000 63.3 trnI-CAU-rpl23_p2 trnI-CAU-rpl23 2 GAATGGTTAAAGCGCCCAAC TGTCCTAGTTGATCCTGATTCG 20 22 50.0 45.5 58.0 57.3 2.3 0.0 2.664963 160937 161561 786-805 1.000000 63.3 trnI-CAU-rpl23_p3 trnI-CAU-rpl23 3 GAATGGTTAAAGCGCCCAAC CGACCCAATGCTTTATTTCTGT 20 22 50.0 40.9 58.0 57.3 2.3 0.0 2.711157 160937 161561 805-824 1.000000 62.9 trnI-CAU-rpl23_p4 trnI-CAU-rpl23 4 GAATGGTTAAAGCGCCCAAC GTCCTAGTTGATCCTGATTCGA 20 22 50.0 45.5 58.0 57.1 2.3 0.0 2.929840 160937 161561 785-804 1.000000 61.2 trnI-CAU-rpl23_p5 trnI-CAU-rpl23 5 GAATGGTTAAAGCGCCCAAC TCCTAGTTGATCCTGATTCGAC 20 22 50.0 45.5 58.0 57.1 2.3 0.0 2.929840 160937 161561 784-803 1.000000 61.2