primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAGCCGAGTACTCTACCGTT TCGATCCCGAAGAGAAGGAA 20 20 50.0 50.0 58.2 57.9 20.3 0.0 0.307743 4258 4895 851-893 0.571429 66.7 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AGATACCCCGGAGACAGAAG GCAAAGACAACGAATTCCGG 20 20 55.0 50.0 57.9 58.0 0.7 0.0 0.110982 4258 4895 1953-1954 0.285714 50.7 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAAGCCGAGTACTCTACCGT GCAAAGACAACGAATTCCGG 20 20 50.0 50.0 58.2 58.0 20.3 0.0 0.204673 4258 4895 1264-1265 0.285714 50.0 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT GCAAAGACAACGAATTCCGG 20 20 50.0 50.0 58.2 58.0 20.3 0.0 0.204673 4258 4895 1263-1264 0.285714 50.0 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AGATACCCCGGAGACAGAAG TCGATCCCGAAGAGAAGGAA 20 20 55.0 50.0 57.9 57.9 0.7 0.0 0.214052 4258 4895 1541-1542 0.285714 50.0 rps16_p1 rps16 1 TATTTGTTCGAGACGCCGTT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.9 58.1 0.0 16.9 0.144938 4896 6055 1890-1958 0.571429 68.2 rps16_p2 rps16 2 AAAGCCGAGTACTCTACCGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 20.3 16.9 0.244521 4896 6055 2255-2336 0.571429 67.7 rps16_p3 rps16 3 AAGCCGAGTACTCTACCGTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 20.3 16.9 0.244521 4896 6055 2254-2335 0.571429 67.7 rps16_p4 rps16 4 TATTTGTTCGAGACGCCGTT AATCCTTCCGTCCCAGATCA 20 20 45.0 50.0 57.9 58.1 0.0 0.0 0.189262 4896 6055 1882-1888 0.285714 50.0 rps16_p5 rps16 5 AAGCCGAGTACTCTACCGTT AATCCTTCCGTCCCAGATCA 20 20 50.0 50.0 58.2 58.1 20.3 0.0 0.288845 4896 6055 2246-2249 0.285714 49.3 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CCGGAATTCGTTGTCTTTGC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.112354 6056 6454 1006-1060 1.000000 88.9 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CCGGAATTCGTTGTCTTTGC CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.092347 6056 6454 1593-1652 1.000000 87.8 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 TCGTTGTCTTTGCTTTTCGC CTTACAGCAGCTTGCCAAAC 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.155727 6056 6454 1586-1589 0.285714 50.4 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CGTTGTCTTTGCTTTTCGCT CTTACAGCAGCTTGCCAAAC 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.161417 6056 6454 1585-1588 0.285714 50.3 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 TCGTTGTCTTTGCTTTTCGC GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.9 58.1 0.0 16.9 0.175734 6056 6454 1003-1007 0.285714 50.2 trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 TCATGTCCTTCAAGTCGCAC CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.260327 6527 6885 1059-1087 1.000000 87.8 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 TGCTCGAGCTGCATCATATG CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 58.2 57.9 35.3 0.0 0.264088 6527 6885 1208-1236 1.000000 87.2 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 AAGTCGCACGTTGCTTTCTA CTTACAGCAGCTTGCCAAAC 20 20 45.0 50.0 58.1 57.9 8.1 0.0 0.195418 6527 6885 1053-1076 0.857143 80.7 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 AAGTCGCACGTTGCTTTCTA ACGCCCCGGATCATTAGATA 20 20 45.0 50.0 58.1 58.1 8.1 0.7 0.206303 6527 6885 1596-1636 0.428571 60.6 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 AAGTCGCACGTTGCTTTCTA TACGCCCCGGATCATTAGAT 20 20 45.0 50.0 58.1 58.1 8.1 0.7 0.206303 6527 6885 1597-1637 0.428571 60.6 trnS-GCU-trnG-GCC_p1 trnS-GCU-trnG-GCC 1 CAATCCGACGCTTTAGTCCA CATCGTTAGCTTGGAAGGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.034421 7880 8501 1376-1443 1.000000 86.3 trnS-GCU-trnG-GCC_p2 trnS-GCU-trnG-GCC 2 AATCCGACGCTTTAGTCCAC CATCGTTAGCTTGGAAGGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.035809 7880 8501 1375-1442 1.000000 86.3 trnS-GCU-trnG-GCC_p3 trnS-GCU-trnG-GCC 3 GATCAGGGGAATCGGAGAGA CATCGTTAGCTTGGAAGGCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.032344 7880 8501 1445-1498 0.571429 67.5 trnS-GCU-trnG-GCC_p4 trnS-GCU-trnG-GCC 4 ATCAGGGGAATCGGAGAGAG CATCGTTAGCTTGGAAGGCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.038081 7880 8501 1444-1497 0.571429 67.5 trnS-GCU-trnG-GCC_p5 trnS-GCU-trnG-GCC 5 GATCAGGGGAATCGGAGAGA CGTTAGCTTGGAAGGCTAGG 20 20 55.0 55.0 58.0 58.1 0.0 0.0 0.061180 7880 8501 1442-1495 0.571429 67.3 atpH-atpI_p1 atpH-atpI 1 AGCCAATCCAGCAGCAATAA GGCTGCGGCTTATATAGGTG 20 20 45.0 55.0 57.9 58.3 0.0 18.8 0.421592 12935 13670 821-833 1.000000 87.1 atpH-atpI_p2 atpH-atpI 2 GCCAATCCAGCAGCAATAAC GGCTGCGGCTTATATAGGTG 20 20 50.0 55.0 57.8 58.3 0.0 18.8 0.487534 12935 13670 820-832 1.000000 86.6 atpH-atpI_p3 atpH-atpI 3 TCCAGCAGCAATAACGGAAG GGCTGCGGCTTATATAGGTG 20 20 50.0 55.0 58.3 58.3 0.0 18.8 0.535308 12935 13670 815-827 1.000000 86.2 atpH-atpI_p4 atpH-atpI 4 AATCCAGCAGCAATAACGGA GGCTGCGGCTTATATAGGTG 20 20 45.0 55.0 57.6 58.3 0.0 18.8 0.691515 12935 13670 817-829 1.000000 85.0 atpH-atpI_p5 atpH-atpI 5 ATCCAGCAGCAATAACGGAA GGCTGCGGCTTATATAGGTG 20 20 45.0 55.0 57.6 58.3 0.0 18.8 0.691515 12935 13670 816-828 1.000000 85.0 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 ATGAACAGCGCAGTAGCAAT AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 58.3 57.9 11.5 0.0 0.343293 29112 30056 1050-1087 1.000000 84.7 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 TTGGCTGACTGTTTTGACGT AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 58.3 57.9 0.0 0.0 0.340822 29112 30056 1102-1139 1.000000 84.4 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 TGAACAGCGCAGTAGCAATA AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 57.6 57.9 11.5 0.0 0.464499 29112 30056 1049-1086 1.000000 83.8 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AAATGAACAGCGCAGTAGCA AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 58.5 57.9 11.5 0.0 0.563386 29112 30056 1052-1089 1.000000 83.0 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AATGAACAGCGCAGTAGCAA AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 58.5 57.9 11.5 0.0 0.563386 29112 30056 1051-1088 1.000000 83.0 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CGTTGCCTCCTTGAAAGAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.175803 30627 31493 971-992 1.000000 83.5 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CGTTGCCTCCTTGAAAGAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.8 58.1 0.0 0.0 0.233900 30627 31493 950-971 1.000000 83.1 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 CGTTGCCTCCTTGAAAGAGA TGGCGTTACTCTACCACTGA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.256054 30627 31493 947-968 1.000000 83.0 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 30627 31493 949-970 1.000000 82.7 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CGTTGCCTCCTTGAAAGAGA CCGATGACTTACGCCTTACC 20 20 50.0 55.0 57.8 58.2 0.0 0.0 0.320736 30627 31493 968-989 1.000000 82.3 rps14-psaB_p1 rps14-psaB 1 CGGTGGGGATTGCAATTTTC ACTTACGCGGCTTTCTTGAT 20 20 50.0 45.0 58.0 57.9 14.3 12.5 0.103514 36618 36749 326-348 1.000000 88.1 rps14-psaB_p2 rps14-psaB 2 GTTCCAATTTCTGGCGCTTC CCAGTGGCTCTTTCCATTGT 20 20 50.0 50.0 58.0 58.1 7.6 0.0 0.102247 36618 36749 294-316 1.000000 88.0 rps14-psaB_p3 rps14-psaB 3 CGGTGGGGATTGCAATTTTC ATTCACTTACGCGGCTTTCT 20 20 50.0 45.0 58.0 57.9 14.3 12.5 0.103514 36618 36749 330-352 1.000000 88.0 rps14-psaB_p4 rps14-psaB 4 CGGTGGGGATTGCAATTTTC CCAGTGGCTCTTTCCATTGT 20 20 50.0 50.0 58.0 58.1 14.3 0.0 0.093611 36618 36749 395-417 1.000000 86.9 rps14-psaB_p5 rps14-psaB 5 CGGTGGGGATTGCAATTTTC CAATAGGGCCGGGAGATTTC 20 20 50.0 55.0 58.0 58.1 14.3 2.2 0.111192 36618 36749 952-974 1.000000 82.7 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCAAGATAGGAATAACGCT CCGAGAAAGTCTACGGTTCG 21 20 42.9 55.0 57.2 58.1 0.0 0.0 1.945776 49721 50859 1191-1322 1.000000 73.1 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCAAGATAGGAATAACGCTT CCGAGAAAGTCTACGGTTCG 22 20 40.9 55.0 57.8 58.1 0.0 0.0 2.258429 49721 50859 1191-1322 1.000000 70.6 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ATGCCAAGATAGGAATAACGCT CCGAGAAAGTCTACGGTTCG 22 20 40.9 55.0 57.6 58.1 0.0 0.0 2.465451 49721 50859 1192-1323 1.000000 68.9 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCAAGATAGGAATAACGC CCGAGAAAGTCTACGGTTCG 20 20 45.0 55.0 55.6 58.1 0.0 0.0 2.491702 49721 50859 1191-1322 1.000000 68.7 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAGATAGGAATAACGCT GTTCGAGTCCGTATAGCCCT 21 20 42.9 55.0 57.2 58.7 0.0 0.0 2.521593 49721 50859 1176-1307 1.000000 68.5 psaJ-rpl33_p1 psaJ-rpl33 1 TTGGGTCTTTAGCGGGTCTA GGTCAACCTATTCACCCGTC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.078570 66328 66896 1187-1220 1.000000 87.4 psaJ-rpl33_p2 psaJ-rpl33 2 CGAACTGAACTAAGAGCGCT GGTCAACCTATTCACCCGTC 20 20 50.0 55.0 58.0 58.0 11.3 0.0 0.035975 66328 66896 1833-1872 1.000000 86.9 psaJ-rpl33_p3 psaJ-rpl33 3 ACCCGTGACATTTTGTACCC GGTCAACCTATTCACCCGTC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.119702 66328 66896 1649-1677 1.000000 86.7 psaJ-rpl33_p4 psaJ-rpl33 4 CGAACTGAACTAAGAGCGCT TAATCGATTCGATCCCCCGA 20 20 50.0 50.0 58.0 58.1 11.3 21.0 0.102250 66328 66896 1757-1796 1.000000 86.6 psaJ-rpl33_p5 psaJ-rpl33 5 CGAACTGAACTAAGAGCGCT TGAGCTTGAGTTCCGATTGG 20 20 50.0 50.0 58.0 57.9 11.3 0.0 0.115169 66328 66896 2011-2050 1.000000 85.8 clpP_p1 clpP 1 GGTTGGCATGTCGTGTCTAT CGAACAATAGGCCGATCCAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.076071 69251 71504 2731-2830 1.000000 87.9 clpP_p2 clpP 2 AGTCGCACATACACCCTAGT CGAACAATAGGCCGATCCAA 20 20 50.0 50.0 58.2 58.1 0.0 0.0 0.203244 69251 71504 2844-2943 1.000000 86.8 clpP_p3 clpP 3 TAATGGTTGGCATGTCGTGT CGAACAATAGGCCGATCCAA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.244559 69251 71504 2735-2834 1.000000 86.5 clpP_p4 clpP 4 GGTTGGCATGTCGTGTCTAT TTCGAACAATAGGCCGATCC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.258475 69251 71504 2733-2832 1.000000 86.4 clpP_p5 clpP 5 GGTTGGCATGTCGTGTCTAT CCAATACGCAATGGGAGGTT 20 20 50.0 50.0 58.0 58.2 0.0 3.8 0.261468 69251 71504 2798-2897 1.000000 86.4 rpl36-infA_p1 rpl36-infA 1 TCATAACCTCTGCTCGTTGC AGAATCCGGCGCAGTTTTAT 20 20 50.0 45.0 58.0 58.0 0.0 10.8 0.048532 79820 79941 795-822 1.000000 86.2 rpl36-infA_p2 rpl36-infA 2 AAACCACTCCGTGCATTCTT GGCGGAATGGGGATTGTAAT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.023367 79820 79941 894-934 1.000000 85.9 rpl36-infA_p3 rpl36-infA 3 TCATAACCTCTGCTCGTTGC GGCGGAATGGGGATTGTAAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.014769 79820 79941 1124-1164 1.000000 85.6 rpl36-infA_p4 rpl36-infA 4 GAAACCACTCGACCTCGTAC GGCGGAATGGGGATTGTAAT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.030137 79820 79941 996-1036 1.000000 85.6 rpl36-infA_p5 rpl36-infA 5 CAGAAGCCCAAGAAACCACT GGCGGAATGGGGATTGTAAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.017741 79820 79941 1008-1025 0.714286 71.3 rpl16-rps3_p1 rpl16-rps3 1 CTGAACTCTGCAATGGAGCT AGAGAAGGCAGAGTTCCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.148287 83009 83188 981-1031 1.000000 84.8 rpl16-rps3_p2 rpl16-rps3 2 TCGTTCCCATAGCTTCTCCA AGAGAAGGCAGAGTTCCCTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.176744 83009 83188 1014-1064 1.000000 84.5 rpl16-rps3_p3 rpl16-rps3 3 AACTCTGCAATGGAGCTTCC AGAGAAGGCAGAGTTCCCTT 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.205805 83009 83188 978-1028 1.000000 84.4 rpl16-rps3_p4 rpl16-rps3 4 GTTTAGGCCTGAACTCTGCA AGAGAAGGCAGAGTTCCCTT 20 20 50.0 50.0 57.8 58.0 28.3 0.0 0.222389 83009 83188 989-1039 1.000000 84.2 rpl16-rps3_p5 rpl16-rps3 5 TGTTTAGGCCTGAACTCTGC AGAGAAGGCAGAGTTCCCTT 20 20 50.0 50.0 57.8 58.0 33.0 0.0 0.222389 83009 83188 990-1040 1.000000 84.2 ndhF-rpl32_p1 ndhF-rpl32 1 GGAGCGGAAAAAGGGGTATT TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 57.9 58.0 0.0 9.5 0.177530 113108 113828 491-911 1.000000 89.8 ndhF-rpl32_p2 ndhF-rpl32 2 ACATAGTAACTGGGAGCGGA TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 57.8 58.0 0.0 9.5 0.192774 113108 113828 503-923 1.000000 89.5 ndhF-rpl32_p3 ndhF-rpl32 3 CATTCCCACGAGTTCCCAAA TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 58.1 58.0 0.0 9.5 0.133920 113108 113828 910-1330 1.000000 88.5 ndhF-rpl32_p4 ndhF-rpl32 4 AACACATTCCCACGAGTTCC TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 58.1 58.0 0.0 9.5 0.145997 113108 113828 914-1334 1.000000 88.3 ndhF-rpl32_p5 ndhF-rpl32 5 TGGCCGAAAAACACATAGCT TCCACCGGACAGTCAAAAAG 20 20 45.0 50.0 58.1 58.0 0.0 9.5 0.133920 113108 113828 950-1031 0.714286 73.2 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 CTTTTTGACTGTCCGGTGGA TGGCGAAACCTTGGGTAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.107041 114003 114655 1191-1301 1.000000 89.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 CTTTTTGACTGTCCGGTGGA GTCCCGAAGAAATCCAACGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.127156 114003 114655 1044-1154 0.571429 70.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGTTGAAATGAGCTGGCCAA TGGCGAAACCTTGGGTAAAA 20 20 45.0 45.0 58.0 57.9 7.0 0.0 0.069186 114003 114655 1889-1889 0.285714 51.1 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGTTGAAATGAGCTGGCCAA GTCCCGAAGAAATCCAACGA 20 20 45.0 50.0 58.0 57.9 7.0 0.0 0.089301 114003 114655 1742-1742 0.285714 51.0 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGTTGAAATGAGCTGGCCAA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.0 57.9 7.0 0.0 0.124629 114003 114655 1416-1417 0.285714 50.7 ycf1_p1 ycf1 1 GGAATTTCTTGGGCCCCTTT TCAAATTGAACAAGCCGCAA 20 20 50.0 40.0 58.3 57.1 22.3 0.0 1.222415 125778 125897 930-933 1.000000 76.9 ycf1_p2 ycf1 2 GGAATTTCTTGGGCCCCTTT TGAACAAGCCGCAAAAGAAA 20 20 50.0 40.0 58.3 57.1 22.3 0.0 1.292864 125778 125897 924-927 1.000000 76.4 ycf1_p3 ycf1 3 GGAATTTCTTGGGCCCCTTT TTGAACAAGCCGCAAAAGAA 20 20 50.0 40.0 58.3 57.1 22.3 0.0 1.292864 125778 125897 925-928 1.000000 76.4 ycf1_p4 ycf1 4 TATGGAATTTCTTGGGCCCC TCAAATTGAACAAGCCGCAA 20 20 50.0 40.0 57.5 57.1 22.3 0.0 1.349059 125778 125897 933-933 0.285714 40.7 ycf1_p5 ycf1 5 TATGGAATTTCTTGGGCCCC TGAACAAGCCGCAAAAGAAA 20 20 50.0 40.0 57.5 57.1 22.3 0.0 1.419508 125778 125897 927-927 0.285714 40.2