primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 GATATGCTCTGGGACGGAAG AGGCTTCAGGTAATTTCGCG 20 20 55.0 50.0 57.6 58.6 0.0 0.0 1.077619 8010 8676 736-835 1.000000 79.5 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 GATATGCTCTGGGACGGAAG GGCTTCAGGTAATTTCGCGA 20 20 55.0 50.0 57.6 58.6 0.0 3.7 1.081545 8010 8676 735-834 1.000000 79.4 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 GACCAAAACCCGTTGCCTTA AGGCTTCAGGTAATTTCGCG 20 20 50.0 50.0 58.7 58.6 0.0 0.0 1.309868 8010 8676 694-793 1.000000 77.8 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 GACCAAAACCCGTTGCCTTA GGCTTCAGGTAATTTCGCGA 20 20 50.0 50.0 58.7 58.6 0.0 3.7 1.313794 8010 8676 693-792 1.000000 77.8 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 AATGGATATGCTCTGGGACG AGGCTTCAGGTAATTTCGCG 20 20 50.0 50.0 57.2 58.6 0.0 0.0 1.477702 8010 8676 740-839 1.000000 76.2 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 GGTTCAAATCCTATTGGACGC CATTCACTCGGGAAGCAGAA 21 20 47.6 50.0 57.3 57.9 0.0 0.0 1.791932 11975 12322 462-556 1.000000 72.7 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 GGTTCAAATCCTATTGGACGC AAGACATTCACTCGGGAAGC 21 20 47.6 50.0 57.3 57.9 0.0 0.0 1.793395 11975 12322 466-560 1.000000 72.7 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 GGTTCAAATCCTATTGGACGC GGAAGCAGAAGCCCTTTTGA 21 20 47.6 50.0 57.3 58.4 0.0 3.1 2.071968 11975 12322 452-546 1.000000 70.6 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 GGTTCAAATCCTATTGGACGC ATTCACTCGGGAAGCAGAAG 21 20 47.6 50.0 57.3 57.6 0.0 0.0 2.086062 11975 12322 461-555 1.000000 70.4 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 GGTTCAAATCCTATTGGACGC CCAAGACATTCACTCGGGAA 21 20 47.6 50.0 57.3 57.5 0.0 0.0 2.165486 11975 12322 468-562 1.000000 69.7 trnG-GCC-trnM-CAU_p1 trnG-GCC-trnM-CAU 1 AAGGACGATCAAAATGCGGA CTTGAGGTCACGGGTTCAAA 20 20 45.0 50.0 57.9 58.0 0.0 4.2 0.146156 40702 40891 310-334 1.000000 83.3 trnG-GCC-trnM-CAU_p2 trnG-GCC-trnM-CAU 2 CAAGGACGATCAAAATGCGG CTTGAGGTCACGGGTTCAAA 20 20 50.0 50.0 57.8 58.0 0.0 4.2 0.216680 40702 40891 311-335 1.000000 82.7 trnG-GCC-trnM-CAU_p3 trnG-GCC-trnM-CAU 3 AAGGACGATCAAAATGCGGA TGAGGTCACGGGTTCAAATC 20 20 45.0 50.0 57.9 57.8 0.0 0.0 0.286862 40702 40891 308-332 1.000000 82.2 trnG-GCC-trnM-CAU_p4 trnG-GCC-trnM-CAU 4 AAGGACGATCAAAATGCGGA GTAGCTCGCAAGGCTCATAA 20 20 45.0 50.0 57.9 57.8 0.0 0.0 0.333018 40702 40891 331-355 1.000000 81.5 trnG-GCC-trnM-CAU_p5 trnG-GCC-trnM-CAU 5 AAGGACGATCAAAATGCGGA TAGCTCGCAAGGCTCATAAC 20 20 45.0 50.0 57.9 57.8 0.0 0.0 0.333018 40702 40891 330-354 1.000000 81.5 rpl33-rps18_p1 rpl33-rps18 1 TCTGTCCCTGTTGTTGCAAA TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.9 57.7 0.0 0.0 0.390844 74014 74260 362-383 1.000000 86.9 rpl33-rps18_p2 rpl33-rps18 2 TTCTGTCCCTGTTGTTGCAA TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.9 57.7 0.0 0.0 0.390844 74014 74260 363-384 1.000000 86.9 rpl33-rps18_p3 rpl33-rps18 3 ATTCTGTCCCTGTTGTTGCA TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.6 57.7 0.0 0.0 0.617852 74014 74260 364-385 1.000000 85.0 rpl33-rps18_p4 rpl33-rps18 4 TCTGTCCCTGTTGTTGCAAA ATTCGATCCCCCGATTGGAT 20 20 45.0 50.0 57.9 58.6 0.0 0.0 0.774074 74014 74260 359-380 1.000000 83.9 rpl33-rps18_p5 rpl33-rps18 5 TTCTGTCCCTGTTGTTGCAA ATTCGATCCCCCGATTGGAT 20 20 45.0 50.0 57.9 58.6 0.0 0.0 0.774074 74014 74260 360-381 1.000000 83.9 ycf1_p1 ycf1 1 TGAACTGCCGTGATTGCTTA CGAAACGGCTGCCATTATTG 20 20 45.0 50.0 57.8 58.2 0.0 20.3 0.351067 122862 122981 684-684 0.500000 57.2 ycf1_p2 ycf1 2 TGAACTGCCGTGATTGCTTA GAAACGGCTGCCATTATTGG 20 20 45.0 50.0 57.8 57.8 0.0 20.3 0.385720 122862 122981 683-683 0.500000 56.9 ycf1_p3 ycf1 3 AATTGAACTGCCGTGATTGC CGAAACGGCTGCCATTATTG 20 20 45.0 50.0 57.6 58.2 0.0 20.3 0.526176 122862 122981 687-687 0.500000 55.8 ycf1_p4 ycf1 4 AATTGAACTGCCGTGATTGC GAAACGGCTGCCATTATTGG 20 20 45.0 50.0 57.6 57.8 0.0 20.3 0.560829 122862 122981 686-686 0.500000 55.5 ycf1_p5 ycf1 5 TGAACTGCCGTGATTGCTTA AACGGCTGCCATTATTGGTA 20 20 45.0 45.0 57.8 57.6 0.0 20.3 0.605938 122862 122981 681-681 0.500000 55.2 ndhH_p1 ndhH 1 GAAAACCCCGGATCGATTGA TCAGGTCCAATACGCTGTTG 20 20 50.0 50.0 58.0 57.9 0.7 0.0 0.125987 124037 125218 1705-1705 0.500000 59.0 ndhH_p2 ndhH 2 AGAAAACCCCGGATCGATTG TCAGGTCCAATACGCTGTTG 20 20 50.0 50.0 58.0 57.9 0.7 0.0 0.131693 124037 125218 1706-1706 0.500000 58.9 ndhH_p3 ndhH 3 GAAAACCCCGGATCGATTGA CGAACAGAAAGGAGCATGGA 20 20 50.0 50.0 58.0 57.9 0.7 0.0 0.131822 124037 125218 2110-2110 0.500000 58.9 ndhH_p4 ndhH 4 AGAAAACCCCGGATCGATTG CGAACAGAAAGGAGCATGGA 20 20 50.0 50.0 58.0 57.9 0.7 0.0 0.137528 124037 125218 2111-2111 0.500000 58.9 ndhH_p5 ndhH 5 GCACACACGCATTGTCTTAC TCAGGTCCAATACGCTGTTG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.142835 124037 125218 2071-2071 0.500000 58.9 ndhA_p1 ndhA 1 AGAGTTGAAGCACCAAAGGG TGCAGCTCGTACTGTTTGTT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.065013 125220 127699 2815-2815 0.500000 59.5 ndhA_p2 ndhA 2 AGAGTTGAAGCACCAAAGGG TTGCAGCTCGTACTGTTTGT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.065013 125220 127699 2816-2816 0.500000 59.5 ndhA_p3 ndhA 3 AGTTGAAGCACCAAAGGGAG TGCAGCTCGTACTGTTTGTT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.065013 125220 127699 2813-2813 0.500000 59.5 ndhA_p4 ndhA 4 AGTTGAAGCACCAAAGGGAG TTGCAGCTCGTACTGTTTGT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.065013 125220 127699 2814-2814 0.500000 59.5 ndhA_p5 ndhA 5 GTTGAAGCACCAAAGGGAGA TGCAGCTCGTACTGTTTGTT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.070639 125220 127699 2812-2812 0.500000 59.4 ndhI-ndhG_p1 ndhI-ndhG 1 AACAAACAGTACGAGCTGCA GTGCTGCAGCTACAAAATGG 20 20 45.0 50.0 58.1 58.0 1.0 36.6 0.065198 128265 129175 1544-1544 0.500000 59.5 ndhI-ndhG_p2 ndhI-ndhG 2 ACAAACAGTACGAGCTGCAA GTGCTGCAGCTACAAAATGG 20 20 45.0 50.0 58.1 58.0 1.0 36.6 0.065198 128265 129175 1543-1543 0.500000 59.5 ndhI-ndhG_p3 ndhI-ndhG 3 AACAAACAGTACGAGCTGCA CAAGAACCAGTCCCAACGAA 20 20 45.0 50.0 58.1 58.0 1.0 0.0 0.090102 128265 129175 1490-1490 0.500000 59.3 ndhI-ndhG_p4 ndhI-ndhG 4 ACAAACAGTACGAGCTGCAA CAAGAACCAGTCCCAACGAA 20 20 45.0 50.0 58.1 58.0 1.0 0.0 0.090102 128265 129175 1489-1489 0.500000 59.3 ndhI-ndhG_p5 ndhI-ndhG 5 AATCAAATTGCTTTGGGCCG GTGCTGCAGCTACAAAATGG 20 20 45.0 50.0 57.9 58.0 0.0 36.6 0.110982 128265 129175 1170-1170 0.500000 59.1 ndhG_p1 ndhG 1 CCTGGTCGTATCAATAAGGTCA TTTCGGCTCGTGATCAATCC 22 20 45.5 50.0 57.3 58.3 0.0 0.0 3.013846 129176 129706 915-915 0.500000 35.9 ndhG_p2 ndhG 2 CCTGGTCGTATCAATAAGGTCA CTGGTCCAATAGCTGCTTCA 22 20 45.5 50.0 57.3 57.6 0.0 7.8 3.074104 129176 129706 1073-1073 0.500000 35.4 ndhG_p3 ndhG 3 CCTGGTCGTATCAATAAGGTCA TGGTCCAATAGCTGCTTCAG 22 20 45.5 50.0 57.3 57.6 0.0 7.8 3.074104 129176 129706 1072-1072 0.500000 35.4 ndhG_p4 ndhG 4 CCTGGTCGTATCAATAAGGTCA CGGCTCGTGATCAATCCATA 22 20 45.5 50.0 57.3 57.6 0.0 0.0 3.104702 129176 129706 912-912 0.500000 35.2 ndhG_p5 ndhG 5 CCTGGTCGTATCAATAAGGTCA TGTTCGAGCATCATTGACCA 22 20 45.5 45.0 57.3 57.5 0.0 0.0 3.136817 129176 129706 852-852 0.500000 34.9 ndhG-ndhE_p1 ndhG-ndhE 1 CCATTTTGTAGCTGCAGCAC ACATCCGTCCCAAGGTATCA 20 20 50.0 50.0 58.0 58.1 38.2 0.0 0.139173 129707 129954 1296-1296 0.500000 58.9 ndhG-ndhE_p2 ndhG-ndhE 2 TTCGTTGGGACTGGTTCTTG ACATCCGTCCCAAGGTATCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.164077 129707 129954 1350-1350 0.500000 58.7 ndhG-ndhE_p3 ndhG-ndhE 3 TTTCTGCCTTTTCGTTGGGA ACATCCGTCCCAAGGTATCA 20 20 45.0 50.0 57.9 58.1 0.0 0.0 0.185921 129707 129954 1360-1360 0.500000 58.5 ndhG-ndhE_p4 ndhG-ndhE 4 CCATTTTGTAGCTGCAGCAC GTTCTCGGAGCAGAAGCAAT 20 20 50.0 50.0 58.0 58.3 38.2 0.0 0.281582 129707 129954 1328-1328 0.500000 57.7 ndhG-ndhE_p5 ndhG-ndhE 5 CCATTTTGTAGCTGCAGCAC CTCTGTTCTCGGAGCAGAAG 20 20 50.0 55.0 58.0 57.7 38.2 16.7 0.289774 129707 129954 1332-1332 0.500000 57.7 ndhD_p1 ndhD 1 AAACAACTCGAAGCATGGGT AATGAGGCCTGGGGATCATA 20 20 45.0 50.0 58.0 57.9 0.0 12.0 0.157278 130907 132400 2157-2157 0.500000 58.7 ndhD_p2 ndhD 2 AAACAACTCGAAGCATGGGT TAATGAGGCCTGGGGATCAT 20 20 45.0 50.0 58.0 57.9 0.0 12.0 0.157278 130907 132400 2158-2158 0.500000 58.7 ndhD_p3 ndhD 3 AAACAACTCGAAGCATGGGT TGAGGCCTGGGGATCATATT 20 20 45.0 50.0 58.0 57.9 0.0 12.0 0.157278 130907 132400 2155-2155 0.500000 58.7 ndhD_p4 ndhD 4 GGCATGAAACAACTCGAAGC AATGAGGCCTGGGGATCATA 20 20 50.0 50.0 58.0 57.9 0.0 12.0 0.169432 130907 132400 2163-2163 0.500000 58.6 ndhD_p5 ndhD 5 GGCATGAAACAACTCGAAGC TGAGGCCTGGGGATCATATT 20 20 50.0 50.0 58.0 57.9 0.0 12.0 0.169432 130907 132400 2161-2161 0.500000 58.6 ndhD-ccsA_p1 ndhD-ccsA 1 CGGTTTTGTTGCGGAATTGA GGGCTACGCAGCTCTTTTAT 20 20 45.0 50.0 57.9 58.0 0.0 7.7 0.171987 132401 132676 1130-1130 0.500000 58.6 ndhD-ccsA_p2 ndhD-ccsA 2 CAGTTGACAAGGTCGAAGCT GGGCTACGCAGCTCTTTTAT 20 20 50.0 50.0 58.1 58.0 0.0 7.7 0.173993 132401 132676 849-849 0.500000 58.6 ndhD-ccsA_p3 ndhD-ccsA 3 TCAGTTGACAAGGTCGAAGC GGGCTACGCAGCTCTTTTAT 20 20 50.0 50.0 58.1 58.0 0.0 7.7 0.179208 132401 132676 850-850 0.500000 58.6 ndhD-ccsA_p4 ndhD-ccsA 4 TTATCTCGACGAAATGGGCG GGGCTACGCAGCTCTTTTAT 20 20 50.0 50.0 58.2 58.0 0.0 7.7 0.197255 132401 132676 1229-1229 0.500000 58.4 ndhD-ccsA_p5 ndhD-ccsA 5 GGGCCGCGAGAGTTATTTAT GGGCTACGCAGCTCTTTTAT 20 20 50.0 50.0 57.8 58.0 8.2 7.7 0.210392 132401 132676 934-934 0.500000 58.3 ccsA_p1 ccsA 1 GGTGTTTGTGAGAACCCCTT GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.075196 132677 133648 1300-1300 0.500000 59.4 ccsA_p2 ccsA 2 GGTGTTTGTGAGAACCCCTT TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.076566 132677 133648 1299-1299 0.500000 59.4 ccsA_p3 ccsA 3 CGGTTTTGTTGCGGAATTGA GTGAAATCGGTAGACACGCT 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.134744 132677 133648 1742-1742 0.500000 58.9 ccsA_p4 ccsA 4 CGGTTTTGTTGCGGAATTGA TGAAATCGGTAGACACGCTG 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.136114 132677 133648 1741-1741 0.500000 58.9 ccsA_p5 ccsA 5 CAGTTGACAAGGTCGAAGCT GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.136750 132677 133648 1461-1461 0.500000 58.9 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AGCGTGTCTACCGATTTCAC GGGATATTGGGCAGCATTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.008182 133830 134885 1185-1185 0.500000 59.9 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 CAGCGTGTCTACCGATTTCA GGGATATTGGGCAGCATTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.009553 133830 134885 1186-1186 0.500000 59.9 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCGTGTCTACCGATTTCAC AGGGATATTGGGCAGCATTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.013201 133830 134885 1186-1186 0.500000 59.9 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 CAGCGTGTCTACCGATTTCA AGGGATATTGGGCAGCATTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.014571 133830 134885 1187-1187 0.500000 59.9 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 TTGATACGACCGAAAACGCT GGGATATTGGGCAGCATTGA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.069189 133830 134885 1395-1395 0.500000 59.4 rpl32-ndhF_p1 rpl32-ndhF 1 TCAATGCTGCCCAATATCCC TAGGGCGTGTGAACCAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.054584 135054 136068 1611-1611 0.500000 59.6 rpl32-ndhF_p2 rpl32-ndhF 2 CAATGCTGCCCAATATCCCT TAGGGCGTGTGAACCAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.059602 135054 136068 1610-1610 0.500000 59.5 rpl32-ndhF_p3 rpl32-ndhF 3 TCAATGCTGCCCAATATCCC AGCAACTGAACCGCCAAATA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.096065 135054 136068 1820-1820 0.500000 59.2 rpl32-ndhF_p4 rpl32-ndhF 4 TCAATGCTGCCCAATATCCC ATTTAGCAACTGAACCGCCA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.096065 135054 136068 1824-1824 0.500000 59.2 rpl32-ndhF_p5 rpl32-ndhF 5 TCAATGCTGCCCAATATCCC TAGCAACTGAACCGCCAAAT 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.096065 135054 136068 1821-1821 0.500000 59.2 ndhF_p1 ndhF 1 TTTTTCTTGTAGCCCGGCTT TGTGGATGTGTCTTCTTCCG 20 20 45.0 50.0 58.0 57.5 19.4 0.0 0.465967 137327 137446 724-724 0.500000 56.3 ndhF_p2 ndhF 2 CACCCTTTGCCTGTTTTTGG TGTGGATGTGTCTTCTTCCG 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.503481 137327 137446 319-319 0.500000 56.0 ndhF_p3 ndhF 3 CCACCCTTTGCCTGTTTTTG TGTGGATGTGTCTTCTTCCG 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.503481 137327 137446 320-320 0.500000 56.0 ndhF_p4 ndhF 4 ATTTGGCGGTTCAGTTGCTA TGTGGATGTGTCTTCTTCCG 20 20 45.0 50.0 58.1 57.5 0.0 0.0 0.551387 137327 137446 846-846 0.500000 55.6 ndhF_p5 ndhF 5 TGGCGGTTCAGTTGCTAAAT TGTGGATGTGTCTTCTTCCG 20 20 45.0 50.0 58.1 57.5 0.0 0.0 0.551387 137327 137446 843-843 0.500000 55.6 ndhF-trnN-GUU_p1 ndhF-trnN-GUU 1 AATATGTAGGGGGTGGCAGA CGGGAGAATTGATGACTGCA 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.234742 138307 140222 2354-2354 0.500000 58.1 ndhF-trnN-GUU_p2 ndhF-trnN-GUU 2 ATATGTAGGGGGTGGCAGAA CGGGAGAATTGATGACTGCA 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.234742 138307 140222 2353-2353 0.500000 58.1 ndhF-trnN-GUU_p3 ndhF-trnN-GUU 3 TATGTAGGGGGTGGCAGAAT CGGGAGAATTGATGACTGCA 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.234742 138307 140222 2352-2352 0.500000 58.1 ndhF-trnN-GUU_p4 ndhF-trnN-GUU 4 ATATGTAGGGGGTGGCAGAA GGCAGAATAGCAGAGCAAGT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.241852 138307 140222 2444-2444 0.500000 58.1 ndhF-trnN-GUU_p5 ndhF-trnN-GUU 5 TATGTAGGGGGTGGCAGAAT GGCAGAATAGCAGAGCAAGT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.241852 138307 140222 2443-2443 0.500000 58.1