primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 79 393 384-390 1.000000 87.1 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.208010 79 393 398-404 1.000000 86.9 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 79 393 397-403 1.000000 86.9 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 79 393 399-405 1.000000 86.9 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG CCGAGCTAACCTTGGTATGG 20 20 55.0 55.0 58.1 57.8 0.0 0.0 0.369413 79 393 433-439 1.000000 84.9 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 GTCTTTCAAGTCGCACGTTG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.081289 6340 6942 683-812 1.000000 91.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 ATGTCTTTCAAGTCGCACGT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 0.0 16.9 0.210236 6340 6942 685-814 1.000000 90.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GCACGTTGCTTTTTACCACA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.8 58.1 0.0 16.9 0.272396 6340 6942 671-800 1.000000 89.8 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CATGTCTTTCAAGTCGCACG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.8 58.1 0.0 16.9 0.293454 6340 6942 686-815 1.000000 89.6 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 TGTCTTTCAAGTCGCACGTT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.4 58.1 0.0 16.9 0.428755 6340 6942 684-813 1.000000 88.6 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 GGTTCAAATCCTATTGGACGC AAGACATTCACTCGGGAAGC 21 20 47.6 50.0 57.3 57.9 0.0 0.0 1.793395 10466 10755 408-493 1.000000 68.8 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 GGTTCAAATCCTATTGGACGC CCAAGACATTCACTCGGGAA 21 20 47.6 50.0 57.3 57.5 0.0 0.0 2.165486 10466 10755 410-495 1.000000 65.9 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 TGGATAGGACAGAGGTCTTCT AAGACATTCACTCGGGAAGC 21 20 47.6 50.0 56.9 57.9 0.0 0.0 2.152209 10466 10755 443-528 1.000000 65.7 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 GGTTCAAATCCTATTGGACGC ACCAAGACATTCACTCGGGA 21 20 47.6 50.0 57.3 58.7 0.0 0.0 2.344727 10466 10755 411-496 1.000000 64.4 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 GTTCAAATCCTATTGGACGCA AAGACATTCACTCGGGAAGC 21 20 42.9 50.0 56.6 57.9 0.0 0.0 2.496339 10466 10755 407-492 1.000000 63.2 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CTTCTCCTGATGGTTGGTCG GCGTCTTCTCTTTGGCAAAG 20 20 55.0 50.0 58.0 57.7 0.0 29.6 0.338107 38737 39259 678-705 1.000000 81.0 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 TTGCTTCTCCTGATGGTTGG GCGTCTTCTCTTTGGCAAAG 20 20 50.0 50.0 57.8 57.7 0.0 29.6 0.527394 38737 39259 681-708 1.000000 79.5 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 TCCTGATGGTTGGTCGAGTA GCGTCTTCTCTTTGGCAAAG 20 20 50.0 50.0 57.8 57.7 0.0 29.6 0.547753 38737 39259 674-701 1.000000 79.3 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 GCTTCTCCTGATGGTTGGTC GCGTCTTCTCTTTGGCAAAG 20 20 55.0 50.0 58.3 57.7 0.0 29.6 0.578376 38737 39259 679-706 1.000000 79.1 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 TTCTCCTGATGGTTGGTCGA GCGTCTTCTCTTTGGCAAAG 20 20 50.0 50.0 58.4 57.7 0.0 29.6 0.682649 38737 39259 677-704 1.000000 78.2 ycf1_p1 ycf1 1 ATCGTTCCATAGCGAATCGG TCAAGATTTACTCGGCCTGC 20 20 50.0 50.0 57.9 58.0 4.4 0.0 0.090168 116464 116583 247-247 0.500000 59.3 ycf1_p2 ycf1 2 ATCGTTCCATAGCGAATCGG TTTACTCGGCCTGCGTATTC 20 20 50.0 50.0 57.9 58.1 4.4 0.0 0.135425 116464 116583 241-241 0.500000 58.9 ycf1_p3 ycf1 3 TGGATTTTGGGGCTTGGATC TCAAGATTTACTCGGCCTGC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.159507 116464 116583 364-364 0.500000 58.7 ycf1_p4 ycf1 4 AGATCGCCATTCCAAGCAAA TCAAGATTTACTCGGCCTGC 20 20 45.0 50.0 58.2 58.0 0.0 0.0 0.186063 116464 116583 560-560 0.500000 58.5 ycf1_p5 ycf1 5 TGGATTTTGGGGCTTGGATC TTTACTCGGCCTGCGTATTC 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.204764 116464 116583 358-358 0.500000 58.4 ndhH_p1 ndhH 1 GCAGCCGTTTCAGTATGGTA CCGTCTGCTAGAGCTTGAAG 20 20 50.0 55.0 58.0 58.1 0.0 2.7 0.098624 118132 119313 2069-2069 0.500000 59.2 ndhH_p2 ndhH 2 GCAGCCGTTTCAGTATGGTA TTTGTTCCGTCTGCTAGAGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.098828 118132 119313 2075-2075 0.500000 59.2 ndhH_p3 ndhH 3 GCAGCCGTTTCAGTATGGTA TCAGGTCCAATACGCTGTTG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.111848 118132 119313 2027-2027 0.500000 59.1 ndhH_p4 ndhH 4 GAAAACCCGGGATCGATTGA CCGTCTGCTAGAGCTTGAAG 20 20 50.0 55.0 58.0 58.1 32.0 2.7 0.112762 118132 119313 1747-1747 0.500000 59.1 ndhH_p5 ndhH 5 GAAAACCCGGGATCGATTGA TTTGTTCCGTCTGCTAGAGC 20 20 50.0 50.0 58.0 57.9 32.0 0.0 0.112966 118132 119313 1753-1753 0.500000 59.1 ndhA_p1 ndhA 1 GTGAGAGTTGAAGCCCCAAA CGATTTGCGTGGGATAAGGT 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.355049 119315 121641 2712-2712 0.500000 57.2 ndhA_p2 ndhA 2 CAGGCTCTGGAAGGAATTCC CGATTTGCGTGGGATAAGGT 20 20 55.0 50.0 58.0 58.3 17.3 0.0 0.386194 119315 121641 2865-2865 0.500000 56.9 ndhA_p3 ndhA 3 GTGAGAGTTGAAGCCCCAAA TTGACCAATGTACCTTGCGG 20 20 50.0 50.0 58.0 58.5 0.0 5.4 0.489518 119315 121641 2680-2680 0.500000 56.1 ndhA_p4 ndhA 4 CAGGCTCTGGAAGGAATTCC TTGACCAATGTACCTTGCGG 20 20 55.0 50.0 58.0 58.5 17.3 5.4 0.520663 119315 121641 2833-2833 0.500000 55.8 ndhA_p5 ndhA 5 GTGAGAGTTGAAGCCCCAAA CGGCTCGTACTGTTTGTTGA 20 20 50.0 50.0 58.0 58.5 0.0 0.0 0.524972 119315 121641 2663-2663 0.500000 55.8 ndhA-ndhI_p1 ndhA-ndhI 1 ACAGTTCTTTACTTGGGCGG CGGCCCAAAGCAATTTGATT 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.205470 121642 121720 789-789 0.500000 58.4 ndhA-ndhI_p2 ndhA-ndhI 2 CAGTTCTTTACTTGGGCGGT CGGCCCAAAGCAATTTGATT 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.205470 121642 121720 788-788 0.500000 58.4 ndhA-ndhI_p3 ndhA-ndhI 3 ATTTATGGCCTTCGAGGAGC CGGCCCAAAGCAATTTGATT 20 20 50.0 45.0 57.7 57.9 3.3 0.0 0.360103 121642 121720 1141-1141 0.500000 57.1 ndhA-ndhI_p4 ndhA-ndhI 4 TTTACTTGGGCGGTTGGAAT CGGCCCAAAGCAATTTGATT 20 20 45.0 45.0 57.7 57.9 0.0 0.0 0.393752 121642 121720 782-782 0.500000 56.8 ndhA-ndhI_p5 ndhA-ndhI 5 CAGTTCTTTACTTGGGCGGT ACATTGGTAAACGGCCCAAA 20 20 50.0 45.0 58.1 58.3 0.0 0.0 0.401918 121642 121720 799-799 0.500000 56.8 ndhI_p1 ndhI 1 ACAGTTCTTTACTTGGGCGG GTGCTGCAGCTACAAAATGG 20 20 50.0 50.0 58.1 58.0 0.0 36.6 0.121093 121721 122206 1396-1396 0.500000 59.0 ndhI_p2 ndhI 2 CAGTTCTTTACTTGGGCGGT GTGCTGCAGCTACAAAATGG 20 20 50.0 50.0 58.1 58.0 0.0 36.6 0.121093 121721 122206 1395-1395 0.500000 59.0 ndhI_p3 ndhI 3 ACAGTTCTTTACTTGGGCGG CAAGAACCAGTCCCAACGAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.145997 121721 122206 1342-1342 0.500000 58.8 ndhI_p4 ndhI 4 CAGTTCTTTACTTGGGCGGT CAAGAACCAGTCCCAACGAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.145997 121721 122206 1341-1341 0.500000 58.8 ndhI_p5 ndhI 5 CAGTTCTTTACTTGGGCGGT TCCCAACGAAAAGGCAGAAA 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.167841 121721 122206 1331-1331 0.500000 58.7 ndhG_p1 ndhG 1 AATCAAATTGCTTTGGGCCG TTGACGAAACAATAGCCGGT 20 20 45.0 45.0 57.9 57.8 0.0 1.9 0.270531 122575 123105 1459-1459 0.500000 57.8 ndhG_p2 ndhG 2 AATCAAATTGCTTTGGGCCG ACAATAGCCGGTCCAATAGC 20 20 45.0 50.0 57.9 57.7 0.0 1.9 0.353797 122575 123105 1451-1451 0.500000 57.2 ndhG_p3 ndhG 3 AATCAAATTGCTTTGGGCCG TGACGAAACAATAGCCGGTC 20 20 45.0 50.0 57.9 58.3 0.0 1.9 0.380486 122575 123105 1458-1458 0.500000 57.0 ndhG_p4 ndhG 4 AATCAAATTGCTTTGGGCCG TTTCGGCTCGTGATCAATCC 20 20 45.0 50.0 57.9 58.3 0.0 0.0 0.445692 122575 123105 1286-1286 0.500000 56.4 ndhG_p5 ndhG 5 TTTGGGCCGTTTACCAATGT TTGACGAAACAATAGCCGGT 20 20 45.0 45.0 58.3 57.8 0.0 1.9 0.466978 122575 123105 1448-1448 0.500000 56.3 ndhE_p1 ndhE 1 CCATTTTGTAGCTGCAGCAC TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.0 58.0 38.2 12.1 0.028758 123341 123646 1312-1312 0.500000 59.8 ndhE_p2 ndhE 2 CCATTTTGTAGCTGCAGCAC ACCCATGCTTCGAGTTGTTT 20 20 50.0 45.0 58.0 58.0 38.2 0.0 0.032046 123341 123646 1406-1406 0.500000 59.7 ndhE_p3 ndhE 3 CCATTTTGTAGCTGCAGCAC GCTTCGAGTTGTTTCATGCC 20 20 50.0 50.0 58.0 58.0 38.2 0.0 0.044199 123341 123646 1400-1400 0.500000 59.6 ndhE_p4 ndhE 4 TTCGTTGGGACTGGTTCTTG TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.0 58.0 0.0 12.1 0.053663 123341 123646 1366-1366 0.500000 59.6 ndhE_p5 ndhE 5 TTCGTTGGGACTGGTTCTTG ACCCATGCTTCGAGTTGTTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.056950 123341 123646 1460-1460 0.500000 59.5 psaC_p1 psaC 1 ACCGGCTATTGTTTCGTCAA AACCGATACCGAGAACTCCT 20 20 45.0 50.0 57.8 57.9 0.0 0.0 0.313690 123911 124156 1270-1270 0.500000 57.5 psaC_p2 psaC 2 GCTATTGGACCGGCTATTGT AACCGATACCGAGAACTCCT 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.396956 123911 124156 1278-1278 0.500000 56.8 psaC_p3 psaC 3 GACCGGCTATTGTTTCGTCA AACCGATACCGAGAACTCCT 20 20 50.0 50.0 58.3 57.9 0.0 0.0 0.423645 123911 124156 1271-1271 0.500000 56.6 psaC_p4 psaC 4 GGATTGATCACGAGCCGAAA AACCGATACCGAGAACTCCT 20 20 50.0 50.0 58.3 57.9 0.0 0.0 0.488851 123911 124156 1443-1443 0.500000 56.1 psaC_p5 psaC 5 ACCGGCTATTGTTTCGTCAA AAGAAACCCGCGGATATTGG 20 20 45.0 50.0 57.8 58.3 0.0 30.7 0.497299 123911 124156 770-770 0.500000 56.0 ndhD_p1 ndhD 1 TCTGCTCCAAGAACAGAGGA TCAGGAGCAGTATGGGCTAA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.190142 124282 125778 2286-2286 0.500000 58.5 ndhD_p2 ndhD 2 TCTGCTCCAAGAACAGAGGA TTCAGGAGCAGTATGGGCTA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.190142 124282 125778 2287-2287 0.500000 58.5 ndhD_p3 ndhD 3 AAACAACTCGAAGCATGGGT TCAGGAGCAGTATGGGCTAA 20 20 45.0 50.0 58.0 57.8 0.0 0.0 0.193429 124282 125778 2192-2192 0.500000 58.5 ndhD_p4 ndhD 4 AAACAACTCGAAGCATGGGT TTCAGGAGCAGTATGGGCTA 20 20 45.0 50.0 58.0 57.8 0.0 0.0 0.193429 124282 125778 2193-2193 0.500000 58.5 ndhD_p5 ndhD 5 GGCATGAAACAACTCGAAGC TCAGGAGCAGTATGGGCTAA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.205582 124282 125778 2198-2198 0.500000 58.4 ccsA_p1 ccsA 1 GGTGTTTGTGAGAACCCCTT GGGATATTGGGCAGCATTGA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.067717 126071 127042 1770-1770 0.500000 59.5 ccsA_p2 ccsA 2 GGTGTTTGTGAGAACCCCTT AGGGATATTGGGCAGCATTG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.072736 126071 127042 1771-1771 0.500000 59.4 ccsA_p3 ccsA 3 GGTGTTTGTGAGAACCCCTT GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.075196 126071 127042 1288-1288 0.500000 59.4 ccsA_p4 ccsA 4 GGTGTTTGTGAGAACCCCTT TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.076566 126071 127042 1287-1287 0.500000 59.4 ccsA_p5 ccsA 5 CAGTTGACAAGGTCGAAGCT GGGATATTGGGCAGCATTGA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.129272 126071 127042 1961-1961 0.500000 59.0 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AGCGTGTCTACCGATTTCAC GGGATATTGGGCAGCATTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.008182 127226 127598 502-502 0.500000 59.9 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 CAGCGTGTCTACCGATTTCA GGGATATTGGGCAGCATTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.009553 127226 127598 503-503 0.500000 59.9 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCGTGTCTACCGATTTCAC AGGGATATTGGGCAGCATTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.013201 127226 127598 503-503 0.500000 59.9 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 CAGCGTGTCTACCGATTTCA AGGGATATTGGGCAGCATTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.014571 127226 127598 504-504 0.500000 59.9 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 GCTGCATAGCCCAATACCAT GGGATATTGGGCAGCATTGA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.085211 127226 127598 1108-1108 0.500000 59.3 rpl32-ndhF_p1 rpl32-ndhF 1 TCAATGCTGCCCAATATCCC TAGGGCGTGTGAACCAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.054584 127767 128524 1354-1354 0.500000 59.6 rpl32-ndhF_p2 rpl32-ndhF 2 CAATGCTGCCCAATATCCCT TAGGGCGTGTGAACCAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.059602 127767 128524 1353-1353 0.500000 59.5 rpl32-ndhF_p3 rpl32-ndhF 3 AGCGTGTCTACCGATTTCAC TAGGGCGTGTGAACCAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.062062 127767 128524 1836-1836 0.500000 59.5 rpl32-ndhF_p4 rpl32-ndhF 4 CAGCGTGTCTACCGATTTCA TAGGGCGTGTGAACCAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.063433 127767 128524 1837-1837 0.500000 59.5 rpl32-ndhF_p5 rpl32-ndhF 5 TCAATGCTGCCCAATATCCC AGCAACTGAACCGCCAAATA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.096065 127767 128524 1563-1563 0.500000 59.2 ndhF_p1 ndhF 1 TCCTGCTTACTTGGTCGTTT GTTTCGATGCAACAACCAACT 20 21 45.0 42.9 57.1 57.9 0.0 0.0 2.001334 128525 130813 2950-2950 0.500000 44.0 ndhF_p2 ndhF 2 TCCTGCTTACTTGGTCGTTT TGTTTCGATGCAACAACCAAC 20 21 45.0 42.9 57.1 58.2 0.0 0.0 2.119289 128525 130813 2951-2951 0.500000 43.0 ndhF_p3 ndhF 3 TCCTGCTTACTTGGTCGTTT TGTTTCGATGCAACAACCAA 20 20 45.0 40.0 57.1 56.8 0.0 0.0 2.158060 128525 130813 2951-2951 0.500000 42.7 ndhF_p4 ndhF 4 ATCCTGCTTACTTGGTCGTT GTTTCGATGCAACAACCAACT 20 21 45.0 42.9 56.8 57.9 0.0 0.0 2.230726 128525 130813 2951-2951 0.500000 42.2 ndhF_p5 ndhF 5 ATCCTGCTTACTTGGTCGTT TGTTTCGATGCAACAACCAAC 20 21 45.0 42.9 56.8 58.2 0.0 0.0 2.348682 128525 130813 2952-2952 0.500000 41.2