primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT GCTCAACCCACAGTAACTGT 20 20 50.0 50.0 58.2 57.7 20.3 0.0 0.424537 3987 4717 746-847 1.000000 88.6 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT GCTCAACCCACAGTAACTGT 20 20 50.0 50.0 58.2 57.7 20.3 0.0 0.424537 3987 4717 745-846 1.000000 88.6 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAAGCCGAGTACTCTACCGT CTTGAAAATGGCGCTCAACC 20 20 50.0 50.0 58.2 58.3 20.3 7.6 0.466716 3987 4717 758-859 1.000000 88.3 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT CCTTGAAAATGGCGCTCAAC 20 20 50.0 50.0 58.2 58.3 20.3 7.6 0.466716 3987 4717 758-859 1.000000 88.3 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT CTTGAAAATGGCGCTCAACC 20 20 50.0 50.0 58.2 58.3 20.3 7.6 0.466716 3987 4717 757-858 1.000000 88.3 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.0 58.5 1.4 0.0 0.556109 12648 13533 895-988 0.969697 83.6 atpH-atpI_p2 atpH-atpI 2 AATAACGGAAGCGGCAGAAA TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.2 58.5 1.4 0.0 0.701648 12648 13533 896-989 0.969697 82.5 atpH-atpI_p3 atpH-atpI 3 GCCAATCCAGCAGCAATAAC TTTTTGCAACTTTAGCCGCG 20 20 50.0 45.0 57.8 58.5 0.0 0.0 0.732109 12648 13533 910-1003 0.969697 82.1 atpH-atpI_p4 atpH-atpI 4 ATAACGGAAGCGGCAGAAAT TAGGTGAATCCATGGAGGGT 20 20 45.0 50.0 58.0 57.4 1.4 21.3 0.625447 12648 13533 868-961 0.909091 80.4 atpH-atpI_p5 atpH-atpI 5 AATAACGGAAGCGGCAGAAA TAGGTGAATCCATGGAGGGT 20 20 45.0 50.0 58.2 57.4 1.4 21.3 0.770985 12648 13533 869-962 0.909091 79.2 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 AAGCCCCGATTAATGAACCC GCGACACCCAGATTTGAACT 20 20 50.0 50.0 57.9 58.5 0.0 0.0 0.543608 25823 26493 811-834 1.000000 87.3 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 AAGCCCCGATTAATGAACCC CCTTACCACTTGGCCATGTC 20 20 50.0 55.0 57.9 58.5 0.0 20.8 0.603691 25823 26493 765-788 1.000000 87.0 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 AAGCCCCGATTAATGAACCC TTTGTCAATCAGGCGACACC 20 20 50.0 50.0 57.9 58.8 0.0 0.0 0.832544 25823 26493 823-846 1.000000 84.9 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CCCCGATTAATGAACCCACA GCGACACCCAGATTTGAACT 20 20 50.0 50.0 57.6 58.5 0.0 0.0 0.904786 25823 26493 808-831 1.000000 84.5 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 AAGCCCCGATTAATGAACCC TAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 57.9 57.5 0.0 14.6 0.592470 25823 26493 786-809 0.939394 84.0 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 TGCGAGAATATTAACTTCCA CCTCGCTGGGATTGTAGTTC 20 20 35.0 55.0 52.0 58.1 0.0 0.0 6.055544 27317 28374 1101-1160 1.000000 51.7 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 TGCGAGAATATTAACTTCCA TACACCTCGCTGGGATTGTA 20 20 35.0 50.0 52.0 58.1 0.0 10.4 6.141574 27317 28374 1105-1164 1.000000 51.7 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 ATGCGAGAATATTAACTTCCA CCTCGCTGGGATTGTAGTTC 21 20 33.3 55.0 52.7 58.1 0.0 0.0 6.328155 27317 28374 1102-1161 1.000000 51.7 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 TGCGAGAATATTAACTTCCAT CCTCGCTGGGATTGTAGTTC 21 20 33.3 55.0 52.7 58.1 0.0 0.0 6.328155 27317 28374 1101-1160 1.000000 51.7 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 TGCGAGAATATTAACTTCCA CATACACCTCGCTGGGATTG 20 20 35.0 55.0 52.0 58.4 0.0 0.0 6.410447 27317 28374 1107-1166 1.000000 51.7 trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 GGATCCTAGTTCGGGACTGA TGGCAATATGTCTACGCTGG 20 20 55.0 50.0 57.9 57.8 3.8 0.0 0.307776 28449 28752 415-458 1.000000 89.5 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 GGATCCTAGTTCGGGACTGA GGCAATATGTCTACGCTGGT 20 20 55.0 50.0 57.9 57.8 3.8 0.0 0.309328 28449 28752 414-457 1.000000 89.5 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 GGATCCTAGTTCGGGACTGA CGGACTGTAAATTCGTTGGC 20 20 55.0 50.0 57.9 57.5 3.8 0.0 0.589520 28449 28752 431-474 1.000000 87.3 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 ATCGGATCCTAGTTCGGGAC TGGCAATATGTCTACGCTGG 20 20 55.0 50.0 58.4 57.8 10.8 0.0 0.620454 28449 28752 418-461 1.000000 87.0 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 CATCGGATCCTAGTTCGGGA TGGCAATATGTCTACGCTGG 20 20 55.0 50.0 58.4 57.8 10.8 0.0 0.621620 28449 28752 419-462 1.000000 87.0 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AGAGATGTCCTGAACCGCTA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 28969 29643 672-768 1.000000 90.8 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 28969 29643 670-766 1.000000 90.8 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 28969 29643 726-822 1.000000 90.7 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 AGAGATGTCCTGAACCGCTA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 28969 29643 651-747 1.000000 90.3 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 AGATGTCCTGAACCGCTAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 28969 29643 649-745 1.000000 90.3 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG TCTACCAAGGGCTACAGTCA 20 20 55.0 50.0 58.1 57.4 7.6 0.0 0.680053 29716 30824 974-1192 1.000000 84.9 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA TCTACCAAGGGCTACAGTCA 20 20 50.0 50.0 58.1 57.4 0.0 0.0 0.702208 29716 30824 977-1195 1.000000 84.7 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GGCGTAAGTCATCGGTTCAA TCTACCAAGGGCTACAGTCA 20 20 50.0 50.0 58.3 57.4 0.0 0.0 0.898792 29716 30824 951-1169 1.000000 83.2 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GGCCCTTTTAACTCAGTGGT TCTACCAAGGGCTACAGTCA 20 20 50.0 50.0 57.7 57.4 0.0 0.0 0.903963 29716 30824 989-1207 1.000000 83.0 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 TGGTAGAGTAACGCCATGGT TCTACCAAGGGCTACAGTCA 20 20 50.0 50.0 58.4 57.4 14.7 0.0 1.052062 29716 30824 973-1191 1.000000 81.9 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 44107 44878 753-896 1.000000 89.0 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 44107 44878 785-928 1.000000 88.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 44107 44878 747-890 1.000000 87.7 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 44107 44878 785-928 1.000000 86.9 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG CAGGTTTCCATACCAAGGCT 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.647198 44107 44878 787-930 1.000000 86.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGGTGCTAAAACTCCGGAAA AGAAGGTCTACGGTTCGAGT 20 20 45.0 50.0 57.4 57.8 5.2 0.0 0.839437 48197 48933 849-870 1.000000 82.7 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TTGGTGCTAAAACTCCGGAA AGAAGGTCTACGGTTCGAGT 20 20 45.0 50.0 57.4 57.8 5.2 0.0 0.839437 48197 48933 850-871 1.000000 82.7 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ATTGGTGCTAAAACTCCGGA AGAAGGTCTACGGTTCGAGT 20 20 45.0 50.0 57.1 57.8 2.9 0.0 1.068380 48197 48933 851-872 1.000000 80.9 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGGTGCTAAAACTCCGGAAA AGCCCAATGCAACAAAATGC 20 20 45.0 45.0 57.4 58.5 5.2 0.0 1.116214 48197 48933 935-955 1.000000 80.4 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TTGGTGCTAAAACTCCGGAA AGCCCAATGCAACAAAATGC 20 20 45.0 45.0 57.4 58.5 5.2 0.0 1.116214 48197 48933 936-956 1.000000 80.4 ycf4-cemA_p1 ycf4-cemA 1 TGGTGTACAATTGCGTGGAA ACAAGCGAAGGAGATACACG 20 20 45.0 50.0 58.0 57.7 5.1 0.0 0.310878 57995 58728 1281-1751 1.000000 88.3 ycf4-cemA_p2 ycf4-cemA 2 TTTCGTTGGGGATTTCCTGG ACAAGCGAAGGAGATACACG 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.361710 57995 58728 1209-1679 1.000000 88.2 ycf4-cemA_p3 ycf4-cemA 3 GCGTGGAATGTAGGTAGTGG ACAAGCGAAGGAGATACACG 20 20 55.0 50.0 58.1 57.7 0.0 0.0 0.343650 57995 58728 1269-1739 1.000000 88.1 ycf4-cemA_p4 ycf4-cemA 4 AACGGGGTCTCGAAAAACAA ACAAGCGAAGGAGATACACG 20 20 45.0 50.0 58.0 57.7 0.0 0.0 0.320833 57995 58728 1483-1953 1.000000 87.8 ycf4-cemA_p5 ycf4-cemA 5 GGAAATAAGAGGCCAAGGGG ACAAGCGAAGGAGATACACG 20 20 55.0 50.0 57.9 57.7 5.0 0.0 0.352834 57995 58728 1090-1560 0.969697 87.2 petA-psbJ_p1 petA-psbJ 1 CATTACGTGTCCAAGGCCTT GGTTCATATTCCGGGTTGGG 20 20 50.0 55.0 58.2 58.3 13.8 0.0 0.491221 60624 61427 946-967 1.000000 83.4 petA-psbJ_p2 petA-psbJ 2 CATTACGTGTCCAAGGCCTT CATATTCCGGGTTGGGTTCA 20 20 50.0 50.0 58.2 57.6 13.8 0.0 0.607328 60624 61427 942-963 1.000000 82.5 petA-psbJ_p3 petA-psbJ 3 CATTACGTGTCCAAGGCCTT GTTCATATTCCGGGTTGGGT 20 20 50.0 50.0 58.2 57.6 13.8 0.0 0.609031 60624 61427 945-966 1.000000 82.5 petA-psbJ_p4 petA-psbJ 4 TTACGTGTCCAAGGCCTTTT GGTTCATATTCCGGGTTGGG 20 20 45.0 55.0 57.6 58.3 17.6 0.0 0.664143 60624 61427 944-965 1.000000 82.1 petA-psbJ_p5 petA-psbJ 5 TACGTGTCCAAGGCCTTTTG GGTTCATATTCCGGGTTGGG 20 20 50.0 55.0 58.4 58.3 17.6 0.0 0.712414 60624 61427 943-964 1.000000 81.7 psbE-petL_p1 psbE-petL 1 ACTGACGAATAACCAACCCG ACCAATCAATAGAGCTGAGGT 20 21 50.0 42.9 57.9 56.4 0.0 0.0 2.671465 62202 63417 1349-1406 1.000000 67.9 psbE-petL_p2 psbE-petL 2 ACGAATAACCAACCCGCAAT ACCAATCAATAGAGCTGAGGT 20 21 45.0 42.9 58.2 56.4 0.0 0.0 2.753536 62202 63417 1345-1402 1.000000 67.2 psbE-petL_p3 psbE-petL 3 CCCGCAATAAATAGGGAGGG ACCAATCAATAGAGCTGAGGT 20 21 55.0 42.9 57.8 56.4 0.0 0.0 2.782888 62202 63417 1333-1390 1.000000 67.0 psbE-petL_p4 psbE-petL 4 ACTGACGAATAACCAACCCG AGCTGAGGTTATAGTTGAAGCA 20 22 50.0 40.9 57.9 57.2 0.0 0.0 2.915224 62202 63417 1337-1394 1.000000 66.0 psbE-petL_p5 psbE-petL 5 ACTGACGAATAACCAACCCG TGAGGTTATAGTTGAAGCAGCT 20 22 50.0 40.9 57.9 57.2 0.0 0.0 2.915224 62202 63417 1334-1391 1.000000 66.0 rpl36-rps8_p1 rpl36-rps8 1 CACTATAATCCGTCCACGCC TCGGGGGAGAAATTTTGTGT 20 20 55.0 45.0 58.2 57.3 0.0 0.0 0.888574 77345 77803 560-574 1.000000 80.9 rpl36-rps8_p2 rpl36-rps8 2 ACTATAATCCGTCCACGCCT TCGGGGGAGAAATTTTGTGT 20 20 50.0 45.0 58.3 57.3 0.0 0.0 0.967189 77345 77803 559-573 1.000000 80.3 rpl36-rps8_p3 rpl36-rps8 3 CACTATAATCCGTCCACGCC TCGGGGGAGAAATTTTGTGTT 20 21 55.0 42.9 58.2 58.0 0.0 0.0 1.268314 77345 77803 560-574 1.000000 77.9 rpl36-rps8_p4 rpl36-rps8 4 ACTATAATCCGTCCACGCCT TCGGGGGAGAAATTTTGTGTT 20 21 50.0 42.9 58.3 58.0 0.0 0.0 1.346929 77345 77803 559-573 1.000000 77.3 rpl36-rps8_p5 rpl36-rps8 5 CACTATAATCCGTCCACGCC ATCGGGGGAGAAATTTTGTGT 20 21 55.0 42.9 58.2 57.8 0.0 0.0 1.389943 77345 77803 561-575 1.000000 76.9 rpl22-rps19_p1 rpl22-rps19 1 TTTCTGTACTCCAACGCGAG CAAGACATGCAAAAACCGAT 20 20 50.0 40.0 57.9 55.2 15.9 0.0 2.897421 81536 81643 175-222 0.969697 67.6 rpl22-rps19_p2 rpl22-rps19 2 GCGTCCACGAATCTGATCAA CAAGACATGCAAAAACCGAT 20 20 50.0 40.0 58.4 55.2 2.6 0.0 3.196668 81536 81643 255-302 0.969697 65.2 rpl22-rps19_p3 rpl22-rps19 3 CGTGCTTTGAAAACCGACAT CAAGACATGCAAAAACCGAT 20 20 45.0 40.0 57.6 55.2 0.0 0.0 3.236491 81536 81643 227-274 0.969697 64.9 rpl22-rps19_p4 rpl22-rps19 4 GAGCGTCCACGAATCTGATC CAAGACATGCAAAAACCGAT 20 20 55.0 40.0 58.5 55.2 2.6 0.0 3.354818 81536 81643 257-304 0.969697 63.9 rpl22-rps19_p5 rpl22-rps19 5 TTCGTGCTTTGAAAACCGAC CAAGACATGCAAAAACCGAT 20 20 45.0 40.0 57.5 55.2 0.0 0.0 3.298992 81536 81643 229-276 0.939394 63.2 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ACTGGGCATTCAAAAAGTTT ACTGCTTCCTAAGAACAGCG 20 20 35.0 50.0 54.1 57.9 0.0 0.0 3.951731 111076 111818 729-885 1.000000 60.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 ACTGGGCATTCAAAAAGTTT CTGCTTCCTAAGAACAGCGT 20 20 35.0 50.0 54.1 57.9 0.0 0.0 3.951731 111076 111818 728-884 1.000000 60.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 ACTGGGCATTCAAAAAGTTT GCTTCCTAAGAACAGCGTGT 20 20 35.0 50.0 54.1 58.2 0.0 0.0 4.068652 111076 111818 726-882 1.000000 59.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 ACTGGGCATTCAAAAAGTTT TGCTTCCTAAGAACAGCGTG 20 20 35.0 50.0 54.1 58.2 0.0 0.0 4.069909 111076 111818 727-883 1.000000 59.4 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ACTGGGCATTCAAAAAGTTTT CTGCTTCCTAAGAACAGCGT 21 20 33.3 50.0 55.0 57.9 0.0 0.0 4.085204 111076 111818 728-884 1.000000 59.3 ndhG-ndhI_p1 ndhG-ndhI 1 TATTCCCAGGCCCCCAAATA TCAAACAGTTATGAATTCGACTCA 20 24 50.0 33.3 58.1 56.7 0.0 0.0 5.415634 116418 116811 275-548 1.000000 51.9 ndhG-ndhI_p2 ndhG-ndhI 2 TCCCAGGCCCCCAAATATAA TCAAACAGTTATGAATTCGACTCA 20 24 50.0 33.3 58.1 56.7 0.0 0.0 5.415634 116418 116811 272-545 1.000000 51.9 ndhG-ndhI_p3 ndhG-ndhI 3 TTCCCAGGCCCCCAAATATA TCAAACAGTTATGAATTCGACTCA 20 24 50.0 33.3 58.1 56.7 0.0 0.0 5.415634 116418 116811 273-546 1.000000 51.9 ndhG-ndhI_p4 ndhG-ndhI 4 CCCAGGCCCCCAAATATAAG TCAAACAGTTATGAATTCGACTCA 20 24 55.0 33.3 57.7 56.7 0.0 0.0 5.653251 116418 116811 271-544 1.000000 51.9 ndhG-ndhI_p5 ndhG-ndhI 5 TCCCAGGCCCCCAAATATAA CAAACAGTTATGAATTCGACTCA 20 23 50.0 34.8 58.1 55.3 0.0 0.0 5.779221 116418 116811 271-544 1.000000 51.9 ycf1_p1 ycf1 1 TGGTATGGTCCCTTCATGGT TTGTCTGAAACCTTGGCGAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.065752 124259 124378 436-448 0.787879 80.1 ycf1_p2 ycf1 2 TGGTATGGTCCCTTCATGGT TTTGTCTGAAACCTTGGCGA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.065752 124259 124378 437-449 0.787879 80.1 ycf1_p3 ycf1 3 TGGTATGGTCCCTTCATGGT TCTGAAACCTTGGCGAAGAC 20 20 50.0 50.0 58.0 58.1 0.0 10.4 0.141238 124259 124378 433-445 0.727273 77.1 ycf1_p4 ycf1 4 TGGTATGGTCCCTTCATGGT AGAAGGGGCAAAAGAACAGG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.021267 124259 124378 775-781 0.484848 64.1 ycf1_p5 ycf1 5 TGGTATGGTCCCTTCATGGT GAAGGGGCAAAAGAACAGGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024814 124259 124378 774-780 0.484848 64.0