primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH(GUG)-psbA_p1 trnH(GUG)-psbA 1 CTGCCTTAATCCACTTGGCT CCGTGCTAACCTTGGTATGG 20 20 50.0 55.0 57.9 58.3 0.0 0.0 0.471094 94 530 508-574 1.000000 87.0 trnH(GUG)-psbA_p2 trnH(GUG)-psbA 2 ACTGCCTTAATCCACTTGGC CCGTGCTAACCTTGGTATGG 20 20 50.0 55.0 58.2 58.3 0.0 0.0 0.496882 94 530 509-575 1.000000 86.8 trnH(GUG)-psbA_p3 trnH(GUG)-psbA 3 CTGCCTTAATCCACTTGGCT ACCGTGCTAACCTTGGTATG 20 20 50.0 50.0 57.9 57.6 0.0 0.0 0.531379 94 530 509-575 1.000000 86.5 trnH(GUG)-psbA_p4 trnH(GUG)-psbA 4 ACTGCCTTAATCCACTTGGC ACCGTGCTAACCTTGGTATG 20 20 50.0 50.0 58.2 57.6 0.0 0.0 0.557166 94 530 510-576 1.000000 86.3 trnH(GUG)-psbA_p5 trnH(GUG)-psbA 5 AATCCACTTGGCTACATCCG CCGTGCTAACCTTGGTATGG 20 20 50.0 55.0 57.7 58.3 0.0 0.0 0.668369 94 530 501-567 1.000000 85.5 rps16-trnQ(UUG)_p1 rps16-trnQ(UUG) 1 CGGATCTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.1 58.1 0.0 16.9 0.161467 6430 8073 1504-1748 1.000000 85.6 rps16-trnQ(UUG)_p2 rps16-trnQ(UUG) 2 ATCTGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.162155 6430 8073 1501-1745 1.000000 85.6 rps16-trnQ(UUG)_p3 rps16-trnQ(UUG) 3 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6430 8073 1490-1734 1.000000 85.2 rps16-trnQ(UUG)_p4 rps16-trnQ(UUG) 4 CCACAACGGATCTGTCCTTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.3 58.1 7.9 16.9 0.349248 6430 8073 1510-1754 1.000000 84.1 rps16-trnQ(UUG)_p5 rps16-trnQ(UUG) 5 GGATCTGTCCTTCAAGTCGC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 0.0 16.9 0.429912 6430 8073 1503-1747 1.000000 83.4 trnS(GCU)-trnG(GCC)_p1 trnS(GCU)-trnG(GCC) 1 CAATCCGACGCTTTAGTCCA AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.0 56.6 0.0 0.0 2.425660 9375 10078 787-818 1.000000 67.0 trnS(GCU)-trnG(GCC)_p2 trnS(GCU)-trnG(GCC) 2 AATCCGACGCTTTAGTCCAC AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.0 56.6 0.0 0.0 2.427048 9375 10078 786-817 1.000000 67.0 trnS(GCU)-trnG(GCC)_p3 trnS(GCU)-trnG(GCC) 3 ATCAACGGAACCGGAAAGAG AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 57.9 56.6 9.5 0.0 2.515840 9375 10078 851-882 1.000000 66.3 trnS(GCU)-trnG(GCC)_p4 trnS(GCU)-trnG(GCC) 4 CATCAACGGAACCGGAAAGA AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.2 56.6 9.5 0.0 2.617743 9375 10078 852-883 1.000000 65.5 trnS(GCU)-trnG(GCC)_p5 trnS(GCU)-trnG(GCC) 5 TCATCAACGGAACCGGAAAG AGACCGAAAGACCCTTTAACT 20 21 50.0 42.9 58.2 56.6 9.5 0.0 2.617743 9375 10078 853-884 1.000000 65.5 atpA-atpF_p1 atpA-atpF 1 ACTAATTTCGTCGGCTCGAA TGTTGGGAGCGATGAAAGAA 20 20 45.0 45.0 57.4 57.4 9.6 0.0 1.201836 12701 12770 124-134 1.000000 78.8 atpA-atpF_p2 atpA-atpF 2 ACTAATTTCGTCGGCTCGAA ATATTGGCATGTTGGGAGCG 20 20 45.0 50.0 57.4 58.7 9.6 0.0 1.320665 12701 12770 133-143 1.000000 77.5 atpA-atpF_p3 atpA-atpF 3 ACTAATTTCGTCGGCTCGAA ATGTTGGGAGCGATGAAAGA 20 20 45.0 45.0 57.4 57.2 9.6 0.0 1.429611 12701 12770 125-135 1.000000 76.9 atpA-atpF_p4 atpA-atpF 4 ACTAATTTCGTCGGCTCGAA CATGTTGGGAGCGATGAAAG 20 20 45.0 50.0 57.4 57.2 9.6 0.0 1.480525 12701 12770 126-136 1.000000 76.5 atpA-atpF_p5 atpA-atpF 5 AATTTCGTCGGCTCGAATGG TGTTGGGAGCGATGAAAGAA 20 20 50.0 45.0 59.0 57.4 13.2 0.0 1.552865 12701 12770 121-131 1.000000 76.1 trnM(CAU)-psbD_p1 trnM(CAU)-psbD 1 GTGGTAGAGTAACGCCATGG GGACCAGCCTACAAAAACGA 20 20 55.0 50.0 58.1 58.1 7.6 0.0 0.177181 33249 34560 1290-1475 1.000000 84.7 trnM(CAU)-psbD_p2 trnM(CAU)-psbD 2 TCAGTGGTAGAGTAACGCCA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199336 33249 34560 1293-1478 1.000000 84.5 trnM(CAU)-psbD_p3 trnM(CAU)-psbD 3 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 33249 34560 1280-1465 1.000000 83.6 trnM(CAU)-psbD_p4 trnM(CAU)-psbD 4 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 33249 34560 1283-1468 1.000000 83.5 trnM(CAU)-psbD_p5 trnM(CAU)-psbD 5 GGCGTAAGTCATCGGTTCAA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.395920 33249 34560 1267-1452 1.000000 83.0 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT ATTGGTTGAAGATCACGGGG 20 20 50.0 50.0 57.9 57.9 4.1 0.0 0.244113 43514 44231 529-852 1.000000 83.7 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT TGGTTTGATCAAGCAGCTGA 20 20 50.0 45.0 57.9 57.7 4.1 20.4 0.390477 43514 44231 602-925 1.000000 82.4 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT CGGAGGCTTGGTTTGATCAA 20 20 50.0 50.0 57.9 58.5 4.1 3.4 0.581718 43514 44231 610-933 1.000000 80.9 psaA-ycf3_p4 psaA-ycf3 4 TGTTCTTGAGAAATGGCCCG ATTGGTTGAAGATCACGGGG 20 20 50.0 50.0 58.5 57.9 0.0 0.0 0.595145 43514 44231 554-877 1.000000 80.8 psaA-ycf3_p5 psaA-ycf3 5 TTTTACTTCTGGTTCCGGCG ATTGGTTGAAGATCACGGGG 20 20 50.0 50.0 58.5 57.9 0.0 0.0 0.613689 43514 44231 482-805 1.000000 80.8 trnM(CAU)-trnL(UAA)_p1 trnM(CAU)-trnL(UAA) 1 TGAAGGAAAAGCCGGCTATC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.0 58.0 33.1 0.0 0.043011 48381 49060 776-792 1.000000 83.4 trnM(CAU)-trnL(UAA)_p2 trnM(CAU)-trnL(UAA) 2 TGAAGGAAAAGCCGGCTATC TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.0 58.1 33.1 0.0 0.107820 48381 49060 784-800 1.000000 82.9 trnM(CAU)-trnL(UAA)_p3 trnM(CAU)-trnL(UAA) 3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 48381 49060 724-740 1.000000 82.9 trnM(CAU)-trnL(UAA)_p4 trnM(CAU)-trnL(UAA) 4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 48381 49060 732-748 1.000000 82.4 trnM(CAU)-trnL(UAA)_p5 trnM(CAU)-trnL(UAA) 5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 48381 49060 756-772 1.000000 81.9 trnF(GAA)-ndhJ_p1 trnF(GAA)-ndhJ 1 GGGATAGCTCAGCTGGTAGA AGTTGGATAGGATGGCCCTT 20 20 55.0 50.0 58.0 58.1 10.3 0.0 0.089643 50033 50700 811-815 1.000000 81.1 trnF(GAA)-ndhJ_p2 trnF(GAA)-ndhJ 2 CCTCGTGTCACCAGTTCAAA AGTTGGATAGGATGGCCCTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.139034 50033 50700 775-779 1.000000 80.7 trnF(GAA)-ndhJ_p3 trnF(GAA)-ndhJ 3 TCAAATCTGGTTCCTGGCAC AGTTGGATAGGATGGCCCTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.177438 50033 50700 760-764 1.000000 80.5 trnF(GAA)-ndhJ_p4 trnF(GAA)-ndhJ 4 GGGATAGCTCAGCTGGTAGA ATCATCCACGCTTGAAACGT 20 20 55.0 45.0 58.0 58.2 10.3 0.0 0.194095 50033 50700 846-850 1.000000 80.2 trnF(GAA)-ndhJ_p5 trnF(GAA)-ndhJ 5 CTGGTAGAGCAGAGGACTGA AGTTGGATAGGATGGCCCTT 20 20 55.0 50.0 57.9 58.1 2.5 0.0 0.223436 50033 50700 799-803 1.000000 80.0 atpB-rbcL_p1 atpB-rbcL 1 ATACGGCCCAGGTTTTGTTT AACACCCGCTTTGAATCCAA 20 20 45.0 45.0 58.0 58.3 0.0 0.0 0.305431 56500 57279 898-920 1.000000 80.9 atpB-rbcL_p2 atpB-rbcL 2 GGAAACCCCAGAACCAGAAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 58.1 58.3 0.0 0.0 0.390437 56500 57279 869-891 1.000000 80.3 atpB-rbcL_p3 atpB-rbcL 3 GGCGGAAAGGCTACATCTAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 57.8 58.3 0.0 0.0 0.457837 56500 57279 940-962 1.000000 79.6 atpB-rbcL_p4 atpB-rbcL 4 TACGGCCCAGGTTTTGTTTT AACACCCGCTTTGAATCCAA 20 20 45.0 45.0 58.2 58.3 0.0 0.0 0.523554 56500 57279 897-919 1.000000 79.2 atpB-rbcL_p5 atpB-rbcL 5 GGACCGATGATTTGGACGAT AACACCCGCTTTGAATCCAA 20 20 50.0 45.0 57.8 58.3 0.0 0.0 0.541987 56500 57279 916-938 1.000000 79.0 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 6.4 0.0 0.992787 67037 68223 1370-1394 1.000000 77.4 psbE-petL_p2 psbE-petL 2 ACTGACGAATAACCAACCCG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.9 57.1 0.0 0.0 1.030402 67037 68223 1383-1407 1.000000 77.1 psbE-petL_p3 psbE-petL 3 AGAACGTTCTCCTGTGCTTC GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 24.9 0.0 1.097796 67037 68223 1293-1317 1.000000 76.9 psbE-petL_p4 psbE-petL 4 ACGAATAACCAACCCGCAAT GTCGTATCTTGCTCAGACCA 20 20 45.0 50.0 58.2 57.1 0.0 0.0 1.112474 67037 68223 1379-1403 1.000000 76.4 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG GTCGTATCTTGCTCAGACCA 20 20 50.0 50.0 57.8 57.1 0.0 0.0 1.128804 67037 68223 1378-1402 1.000000 76.3 rpl16_p1 rpl16 1 CCCCAAGATTCATTTCTGTTGG TCAATTGACCATTTGATATAATTGCT 22 26 45.5 26.9 57.5 56.1 0.0 3.4 10.400484 83541 84824 1296-1342 1.000000 45.0 rpl16_p2 rpl16 2 CCCCAAGATTCATTTCTGTTGG TCAATTGACCATTTGATATAATTGC 22 25 45.5 28.0 57.5 54.8 0.0 3.4 10.684716 83541 84824 1296-1342 1.000000 45.0 rpl16_p3 rpl16 3 CCCCAAGATTCATTTCTGTTGG CAATTGACCATTTGATATAATTGCT 22 25 45.5 28.0 57.5 54.8 0.0 0.0 10.696015 83541 84824 1295-1341 1.000000 45.0 rpl16_p4 rpl16 4 CCCCAAGATTCATTTCTGTTGG TTCAATTGACCATTTGATATAATTGCT 22 27 45.5 25.9 57.5 56.7 0.0 7.9 10.793068 83541 84824 1297-1343 1.000000 45.0 rpl16_p5 rpl16 5 CCCCAAGATTCATTTCTGTTGG ATTGACCATTTGATATAATTGCT 22 23 45.5 26.1 57.5 52.5 0.0 0.0 10.955546 83541 84824 1293-1339 1.000000 45.0 rpl22-rps19_p1 rpl22-rps19 1 AAGAGCGTCCACGAATTTGA AGGACACAAATTGGGCGAAT 20 20 45.0 45.0 57.8 58.1 2.6 0.0 0.240462 86086 86150 247-247 0.041667 39.7 rpl22-rps19_p2 rpl22-rps19 2 AAGAGCGTCCACGAATTTGA TGGTAGGACACAAATTGGGC 20 20 45.0 50.0 57.8 58.1 2.6 0.0 0.245946 86086 86150 251-251 0.041667 39.7 rpl22-rps19_p3 rpl22-rps19 3 AAGAGCGTCCACGAATTTGA GTAGGACACAAATTGGGCGA 20 20 45.0 50.0 57.8 58.2 2.6 0.0 0.347744 86086 86150 249-249 0.041667 38.9 rpl22-rps19_p4 rpl22-rps19 4 AGAGCGTCCACGAATTTGAT AGGACACAAATTGGGCGAAT 20 20 45.0 45.0 57.6 58.1 2.6 0.0 0.463305 86086 86150 246-246 0.041667 38.0 rpl22-rps19_p5 rpl22-rps19 5 AGAGCGTCCACGAATTTGAT TGGTAGGACACAAATTGGGC 20 20 45.0 50.0 57.6 58.1 2.6 0.0 0.468789 86086 86150 250-250 0.041667 37.9 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCCGTCGGAAAAAGAAG ACGCGTTTTTGATGCAGAAG 20 20 50.0 45.0 58.0 58.0 17.5 5.6 0.068971 114328 114755 566-623 1.000000 84.9 ndhF-rpl32_p2 ndhF-rpl32 2 GTTGCCGTCGGAAAAAGAAG CGCGTTTTTGATGCAGAAGT 20 20 50.0 45.0 58.0 58.0 17.5 0.0 0.068971 114328 114755 565-622 1.000000 84.9 ndhF-rpl32_p3 ndhF-rpl32 3 TGCCGTCGGAAAAAGAAGAA ACGCGTTTTTGATGCAGAAG 20 20 45.0 45.0 58.0 58.0 17.5 5.6 0.080260 114328 114755 564-621 1.000000 84.8 ndhF-rpl32_p4 ndhF-rpl32 4 TGCCGTCGGAAAAAGAAGAA CGCGTTTTTGATGCAGAAGT 20 20 45.0 45.0 58.0 58.0 17.5 0.0 0.080260 114328 114755 563-620 1.000000 84.8 ndhF-rpl32_p5 ndhF-rpl32 5 TTGCCGTCGGAAAAAGAAGA CGCGTTTTTGATGCAGAAGT 20 20 45.0 45.0 58.0 58.0 17.5 0.0 0.080260 114328 114755 564-621 1.000000 84.8 rpl32-trnL(UAG)_p1 rpl32-trnL(UAG) 1 TGGGACAGCGTTAAAAGCAT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.1 57.9 6.9 0.0 0.219990 114918 115779 983-1001 1.000000 83.5 rpl32-trnL(UAG)_p2 rpl32-trnL(UAG) 2 TGGGACAGCGTTAAAAGCAT AGCAGCGTGTCTACCAATTT 20 20 45.0 45.0 58.1 57.8 6.9 0.0 0.280717 114918 115779 976-994 1.000000 83.1 rpl32-trnL(UAG)_p3 rpl32-trnL(UAG) 3 TGGGACAGCGTTAAAAGCAT CCTAAGAGCAGCGTGTCTAC 20 20 45.0 55.0 58.1 57.8 6.9 0.0 0.292008 114918 115779 982-1000 1.000000 82.9 rpl32-trnL(UAG)_p4 rpl32-trnL(UAG) 4 TGGGACAGCGTTAAAAGCAT CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 58.1 57.8 6.9 0.0 0.292008 114918 115779 981-999 1.000000 82.9 rpl32-trnL(UAG)_p5 rpl32-trnL(UAG) 5 TGGGACAGCGTTAAAAGCAT GAGCAGCGTGTCTACCAATT 20 20 45.0 50.0 58.1 58.3 6.9 0.0 0.368860 114918 115779 977-995 1.000000 82.3 trnL(UAG)-ccsA_p1 trnL(UAG)-ccsA 1 TAGACACGCTGCTCTTAGGA ACAATTGAAACGATCGAAAAAGA 20 23 50.0 30.4 57.9 55.7 0.0 24.3 5.407052 115860 115949 213-213 1.000000 42.3 trnL(UAG)-ccsA_p2 trnL(UAG)-ccsA 2 AAATTGGTAGACACGCTGCT ACAATTGAAACGATCGAAAAAGA 20 23 45.0 30.4 57.8 55.7 0.0 24.3 5.467778 115860 115949 220-220 1.000000 42.2 trnL(UAG)-ccsA_p3 trnL(UAG)-ccsA 3 GTAGACACGCTGCTCTTAGG ACAATTGAAACGATCGAAAAAGA 20 23 55.0 30.4 57.8 55.7 0.0 24.3 5.479069 115860 115949 214-214 1.000000 42.2 trnL(UAG)-ccsA_p4 trnL(UAG)-ccsA 4 GAGTTCAAGACAAGCCGCTA ACAATTGAAACGATCGAAAAAGA 20 23 50.0 30.4 57.9 55.7 0.0 24.3 5.363060 115860 115949 245-245 1.000000 42.0 trnL(UAG)-ccsA_p5 trnL(UAG)-ccsA 5 ACAAGCCGCTATGGTGAAAT ACAATTGAAACGATCGAAAAAGA 20 23 45.0 30.4 57.9 55.7 0.0 24.3 5.411545 115860 115949 236-236 1.000000 42.0 ycf1_p1 ycf1 1 TGAACATTAGTATCAGTTACAATTCT ACCATTATCAACTGAAATTGTTG 26 23 26.9 30.4 54.8 53.8 0.0 0.0 16.390293 129120 129239 186-189 1.000000 47.6 ycf1_p2 ycf1 2 TGAACATTAGTATCAGTTACAATTCT AACCATTATCAACTGAAATTGTTG 26 24 26.9 29.2 54.8 54.6 0.0 0.0 16.626714 129120 129239 187-190 1.000000 47.6 ycf1_p3 ycf1 3 TTGAACATTAGTATCAGTTACAATTCT ACCATTATCAACTGAAATTGTTG 27 23 25.9 30.4 55.4 53.8 0.0 0.0 16.735133 129120 129239 187-190 1.000000 47.6 ycf1_p4 ycf1 4 TGAACATTAGTATCAGTTACAATTC ACCATTATCAACTGAAATTGTTG 25 23 28.0 30.4 53.4 53.8 0.0 0.0 16.706595 129120 129239 186-189 0.958333 45.5 ycf1_p5 ycf1 5 TTTGAACATTAGTATCAGTTACAA ACCATTATCAACTGAAATTGTTG 24 23 25.0 30.4 52.4 53.8 0.0 0.0 16.740273 129120 129239 188-191 0.958333 45.5