primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnfM-CAU-trnT-GGU_p1 trnfM-CAU-trnT-GGU 1 CCTCAAGGTTATGAGCCTCG ACCACTAAGTGAAAAGCCCT 20 20 55.0 45.0 57.8 56.7 0.0 0.0 1.579584 13238 16005 2901-2901 1.000000 67.4 trnfM-CAU-trnT-GGU_p2 trnfM-CAU-trnT-GGU 2 CCTCAAGGTTATGAGCCTCG TGAACCGATGACTTATGCCT 20 20 55.0 45.0 57.8 56.6 0.0 0.0 1.602911 13238 16005 2871-2871 1.000000 67.2 trnfM-CAU-trnT-GGU_p3 trnfM-CAU-trnT-GGU 3 CCTCGTGAGCTACCAAACTG ACCACTAAGTGAAAAGCCCT 20 20 55.0 45.0 58.3 56.7 0.0 0.0 1.633575 13238 16005 2886-2886 1.000000 67.0 trnfM-CAU-trnT-GGU_p4 trnfM-CAU-trnT-GGU 4 CCTCAAGGTTATGAGCCTCG GACTTCTGTCTTACCAAGGCA 20 21 55.0 47.6 57.8 57.6 0.0 0.0 1.633842 13238 16005 2929-2929 1.000000 67.0 trnfM-CAU-trnT-GGU_p5 trnfM-CAU-trnT-GGU 5 CCTCAAGGTTATGAGCCTCG TGACTTCTGTCTTACCAAGGC 20 21 55.0 47.6 57.8 57.6 0.0 0.0 1.633842 13238 16005 2930-2930 1.000000 67.0 trnD-GUC-psbM_p1 trnD-GUC-psbM 1 AATAGGCATGCCATACACCC GGCAGTAGGAACTAGAATGAACA 20 23 50.0 43.5 57.7 57.9 37.2 0.0 3.378932 17260 18317 1216-1216 1.000000 53.0 trnD-GUC-psbM_p2 trnD-GUC-psbM 2 TTCAATTGGTCAGAGCACCG GGCAGTAGGAACTAGAATGAACA 20 23 50.0 43.5 58.5 57.9 5.4 0.0 3.563435 17260 18317 1182-1182 1.000000 51.6 trnD-GUC-psbM_p3 trnD-GUC-psbM 3 AATAGGCATGCCATACACCC AGGCAGTAGGAACTAGAATGAAC 20 23 50.0 43.5 57.7 57.7 37.2 0.0 3.639009 17260 18317 1217-1217 1.000000 51.0 trnD-GUC-psbM_p4 trnD-GUC-psbM 4 AATAGGCATGCCATACACCC AGGCAGTAGGAACTAGAATGA 20 21 50.0 42.9 57.7 55.5 37.2 0.0 3.794602 17260 18317 1217-1217 1.000000 49.7 trnD-GUC-psbM_p5 trnD-GUC-psbM 5 AATAGGCATGCCATACACCC TGCGAGAATATTGACTTCCA 20 20 50.0 40.0 57.7 54.5 37.2 0.0 3.812375 17260 18317 1177-1177 1.000000 49.6 trnC-GCA-rpoB_p1 trnC-GCA-rpoB 1 AAAGGATTTGCAGTCCCCTG CTTCTCAAGTTCTTCCGCCA 20 20 50.0 50.0 58.1 57.8 14.6 0.0 0.240964 20322 21377 394-1210 1.000000 78.1 trnC-GCA-rpoB_p2 trnC-GCA-rpoB 2 AAAGGATTTGCAGTCCCCTG TCTCAAGTTCTTCCGCCAAG 20 20 50.0 50.0 58.1 57.8 14.6 0.0 0.240964 20322 21377 393-1208 1.000000 78.1 trnC-GCA-rpoB_p3 trnC-GCA-rpoB 3 AAAGGATTTGCAGTCCCCTG ACTTCTCAAGTTCTTCCGCC 20 20 50.0 50.0 58.1 57.8 14.6 0.0 0.242473 20322 21377 395-1211 1.000000 78.1 trnC-GCA-rpoB_p4 trnC-GCA-rpoB 4 AAAGGATTTGCAGTCCCCTG TTCCGCCAAGCCTTGATTAA 20 20 50.0 45.0 58.1 57.8 14.6 5.9 0.279264 20322 21377 394-1198 1.000000 77.8 trnC-GCA-rpoB_p5 trnC-GCA-rpoB 5 AAAGGATTTGCAGTCCCCTG CTTCCGCCAAGCCTTGATTA 20 20 50.0 50.0 58.1 58.2 14.6 5.9 0.320939 20322 21377 394-1199 1.000000 77.4 rpoC1_p1 rpoC1 1 AGGGAGGATGTTTGATCGGA ACTAGCGAAATCGGAATGCC 20 20 50.0 50.0 58.1 58.4 0.0 4.8 0.537372 24649 26700 2160-2160 1.000000 75.8 rpoC1_p2 rpoC1 2 AGGGAGGATGTTTGATCGGA TCTCAATCTGGATTTGCGCG 20 20 50.0 50.0 58.1 59.0 0.0 0.0 1.111347 24649 26700 2194-2194 1.000000 71.2 rpoC1_p3 rpoC1 3 AGGGAGGATGTTTGATCGGA TAGCGAAATCGGAATGCCC 20 19 50.0 52.6 58.1 58.0 0.0 4.8 1.121241 24649 26700 2158-2158 1.000000 71.1 rpoC1_p4 rpoC1 4 GGGAGGATGTTTGATCGGAA ACTAGCGAAATCGGAATGCC 20 20 50.0 50.0 57.3 58.4 0.0 4.8 1.127042 24649 26700 2159-2159 1.000000 71.1 rpoC1_p5 rpoC1 5 AGGGAGGATGTTTGATCGGA CTAGCGAAATCGGAATGCCC 20 20 50.0 55.0 58.1 59.1 0.0 4.8 1.252019 24649 26700 2159-2159 1.000000 70.1 atpA_p1 atpA 1 ATTCTCGGGGCCATAGAATG ACGATTCCTCTTCTACTAACACG 20 23 50.0 43.5 57.1 57.8 24.0 0.0 4.099719 36558 38081 1698-1698 1.000000 47.2 atpA_p2 atpA 2 ATTCTCGGGGCCATAGAATG CGATTCCTCTTCTACTAACACGA 20 23 50.0 43.5 57.1 57.5 24.0 0.0 4.348309 36558 38081 1697-1697 1.000000 45.2 atpA_p3 atpA 3 ATTCTCGGGGCCATAGAATG TCTTTCTCAACGATTCCTCTTCT 20 23 50.0 39.1 57.1 57.3 24.0 0.0 4.597405 36558 38081 1707-1707 1.000000 43.2 atpA_p4 atpA 4 ATTCTCGGGGCCATAGAATG TCCTCTTCTACTAACACGAGT 20 21 50.0 42.9 57.1 55.2 24.0 0.0 4.648874 36558 38081 1693-1693 1.000000 42.8 atpA_p5 atpA 5 ATTCTCGGGGCCATAGAATG CGATTCCTCTTCTACTAACACG 20 22 50.0 45.5 57.1 56.1 24.0 0.0 4.727983 36558 38081 1697-1697 1.000000 42.2 atpA-trnR-UCU_p1 atpA-trnR-UCU 1 AGGAACAGCTTGAACGGTTT AAGAGAAGCGTCCATTGTCT 20 20 45.0 45.0 57.9 56.9 0.0 0.0 1.191922 38082 38218 257-257 1.000000 70.8 atpA-trnR-UCU_p2 atpA-trnR-UCU 2 AGCTTGAACGGTTTTCCCTT AAGAGAAGCGTCCATTGTCT 20 20 45.0 45.0 57.9 56.9 0.0 0.0 1.206506 38082 38218 251-251 1.000000 70.7 atpA-trnR-UCU_p3 atpA-trnR-UCU 3 ATTCACCGAGCAAGCAGAAA AAGAGAAGCGTCCATTGTCT 20 20 45.0 45.0 58.1 56.9 0.0 0.0 1.242920 38082 38218 298-298 1.000000 70.3 atpA-trnR-UCU_p4 atpA-trnR-UCU 4 AGGAACAGCTTGAACGGTTT AAAGAGAAGCGTCCATTGTCT 20 21 45.0 42.9 57.9 57.6 0.0 0.0 1.461808 38082 38218 258-258 1.000000 68.6 atpA-trnR-UCU_p5 atpA-trnR-UCU 5 AGGAACAGCTTGAACGGTTT AGAAAGAGAAGCGTCCATTGT 20 21 45.0 42.9 57.9 57.6 0.0 0.0 1.461808 38082 38218 260-260 1.000000 68.6 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 ATTTGAACCGATGACCCTCG ACAATCAAGTCCGTAGCGTC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.032006 48147 48995 922-950 1.000000 82.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 CGATGACCCTCGCATTACAA ACAATCAAGTCCGTAGCGTC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.073242 48147 48995 914-942 1.000000 81.8 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG ACAATCAAGTCCGTAGCGTC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.140570 48147 48995 892-920 1.000000 81.3 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 ATTTGAACCGATGACCCTCG CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 58.0 58.2 0.0 10.2 0.272624 48147 48995 912-940 1.000000 80.2 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 ATTTGAACCGATGACCCTCG CAATCAAGTCCGTAGCGTCT 20 20 50.0 50.0 58.0 57.7 0.0 0.0 0.303758 48147 48995 921-949 1.000000 80.0 ycf4_p1 ycf4 1 TTCAATTGACCGCTACTGGA TCCTCGTTTGTTCCTTCCTT 20 20 45.0 45.0 56.9 56.7 7.9 0.0 2.457268 59770 60327 664-664 1.000000 60.3 ycf4_p2 ycf4 2 TCAATTGACCGCTACTGGAT TCCTCGTTTGTTCCTTCCTT 20 20 45.0 45.0 56.6 56.7 3.4 0.0 2.687665 59770 60327 663-663 1.000000 58.5 ycf4_p3 ycf4 3 TTCAATTGACCGCTACTGGA ATCCTCGTTTGTTCCTTCCT 20 20 45.0 45.0 56.9 56.5 7.9 0.0 2.690376 59770 60327 665-665 1.000000 58.5 ycf4_p4 ycf4 4 TTCAATTGACCGCTACTGGA TCCTCGTTTGTTCCTTCCTTT 20 21 45.0 42.9 56.9 57.4 7.9 0.0 2.712210 59770 60327 664-664 1.000000 58.3 ycf4_p5 ycf4 5 TTTCAATTGACCGCTACTGGA TCCTCGTTTGTTCCTTCCTT 21 20 42.9 45.0 57.6 56.7 7.9 0.0 2.726600 59770 60327 665-665 1.000000 58.2 ycf4-cemA_p1 ycf4-cemA 1 TTGGCCTATTTCTTGCGTGT AGAGAAAGAGACTCCCCAGG 20 20 45.0 55.0 58.1 57.8 3.3 0.0 0.341805 60328 60694 484-484 1.000000 77.4 ycf4-cemA_p2 ycf4-cemA 2 ACAAAAAGCTGCCGAATTGG AGAGAAAGAGACTCCCCAGG 20 20 45.0 55.0 57.8 57.8 0.0 0.0 0.399458 60328 60694 500-500 1.000000 77.0 ycf4-cemA_p3 ycf4-cemA 3 TTGGCCTATTTCTTGCGTGT CCCAGGGCAAAAGTACGATA 20 20 45.0 50.0 58.1 57.3 3.3 0.0 0.798305 60328 60694 470-470 1.000000 73.8 ycf4-cemA_p4 ycf4-cemA 4 ACAAAAAGCTGCCGAATTGG CCCAGGGCAAAAGTACGATA 20 20 45.0 50.0 57.8 57.3 0.0 0.0 0.855958 60328 60694 486-486 1.000000 73.3 ycf4-cemA_p5 ycf4-cemA 5 TTGGCCTATTTCTTGCGTGT GAGAAAGAGACTCCCCAGGG 20 20 45.0 60.0 58.1 58.8 3.3 0.0 0.896098 60328 60694 483-483 1.000000 73.0 petD_p1 petD 1 ACGAAAGAAAATAAGGCGGA TTCGCGGTGGAATGAATCAA 20 20 40.0 45.0 55.4 58.2 0.0 6.1 2.807950 74734 75956 1282-1282 1.000000 57.6 petD_p2 petD 2 ACGAAAGAAAATAAGGCGGAT TTCGCGGTGGAATGAATCAA 21 20 38.1 45.0 56.0 58.2 0.0 6.1 3.233344 74734 75956 1282-1282 1.000000 54.2 petD_p3 petD 3 ACGAAAGAAAATAAGGCGGA ACTTCGCGGTGGAATGAATC 20 20 40.0 50.0 55.4 58.6 0.0 6.1 3.253118 74734 75956 1284-1284 1.000000 54.0 petD_p4 petD 4 ACGAAAGAAAATAAGGCGGA GACTTCGCGGTGGAATGAAT 20 20 40.0 50.0 55.4 58.6 0.0 6.1 3.253118 74734 75956 1285-1285 1.000000 54.0 petD_p5 petD 5 ACGAAAGAAAATAAGGCGGA CTTCGCGGTGGAATGAATCA 20 20 40.0 50.0 55.4 58.6 0.0 6.1 3.254102 74734 75956 1283-1283 1.000000 54.0 petD-rpoA_p1 petD-rpoA 1 ATCGGTACTGCAGTAGCTCT TGGGACACTCTAGAGAAGCA 20 20 50.0 50.0 57.9 57.4 38.7 26.6 0.664962 75957 76173 358-358 1.000000 74.9 petD-rpoA_p2 petD-rpoA 2 TCGGTACTGCAGTAGCTCTT TGGGACACTCTAGAGAAGCA 20 20 50.0 50.0 58.2 57.4 38.7 26.6 0.769418 75957 76173 357-357 1.000000 74.1 petD-rpoA_p3 petD-rpoA 3 CCAGTAGCTACGACCGTTTT TGGGACACTCTAGAGAAGCA 20 20 50.0 50.0 57.6 57.4 18.0 26.6 0.963851 75957 76173 382-382 1.000000 72.5 petD-rpoA_p4 petD-rpoA 4 ATCGGTACTGCAGTAGCTCT TGGGACACTCTAGAGAAGCAT 20 21 50.0 47.6 57.9 57.9 38.7 26.6 1.167452 75957 76173 358-358 1.000000 70.9 petD-rpoA_p5 petD-rpoA 5 CGGTACTGCAGTAGCTCTTT TGGGACACTCTAGAGAAGCA 20 20 50.0 50.0 57.3 57.4 38.7 26.6 1.261472 75957 76173 356-356 1.000000 70.1 rps11-rpl36_p1 rps11-rpl36 1 CGCAAACCAATACGCACTTT CGTGGGCGAATTAGAGTCAT 20 20 45.0 50.0 58.0 57.8 0.0 0.0 0.269956 77693 77866 287-287 1.000000 77.8 rps11-rpl36_p2 rps11-rpl36 2 CTACGCAAACCAATACGCAC CGTGGGCGAATTAGAGTCAT 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.378748 77693 77866 290-290 1.000000 77.0 rps11-rpl36_p3 rps11-rpl36 3 TCTACGTGCACTCTTCCGTA CGTGGGCGAATTAGAGTCAT 20 20 50.0 50.0 58.2 57.8 16.2 0.0 0.412833 77693 77866 327-327 1.000000 76.7 rps11-rpl36_p4 rps11-rpl36 4 TACGCAAACCAATACGCACT CGTGGGCGAATTAGAGTCAT 20 20 45.0 50.0 58.2 57.8 0.0 0.0 0.426785 77693 77866 289-289 1.000000 76.6 rps11-rpl36_p5 rps11-rpl36 5 CGTGCACTCTTCCGTAAACT CGTGGGCGAATTAGAGTCAT 20 20 50.0 50.0 58.2 57.8 16.2 0.0 0.445499 77693 77866 323-323 1.000000 76.4 trnI-CAU-ycf15_p1 trnI-CAU-ycf15 1 GTTGGGCGCTTTAACCATTC TTCAGGGCCTATCCGAAAGA 20 20 50.0 50.0 58.0 58.1 7.6 5.3 0.135071 84996 87548 2691-2696 1.000000 79.1 trnI-CAU-ycf15_p2 trnI-CAU-ycf15 2 GTTGGGCGCTTTAACCATTC CTCCGCGGATATCTTTGCTT 20 20 50.0 50.0 58.0 58.1 7.6 31.2 0.138121 84996 87548 2620-2625 1.000000 79.0 trnI-CAU-ycf15_p3 trnI-CAU-ycf15 3 GTTGGGCGCTTTAACCATTC GCGGATATCTTTGCTTCGGA 20 20 50.0 50.0 58.0 58.1 7.6 2.0 0.143336 84996 87548 2616-2621 1.000000 79.0 trnI-CAU-ycf15_p4 trnI-CAU-ycf15 4 GTTGGGCGCTTTAACCATTC TCCGCGGATATCTTTGCTTC 20 20 50.0 50.0 58.0 58.1 7.6 27.3 0.143336 84996 87548 2619-2624 1.000000 79.0 trnI-CAU-ycf15_p5 trnI-CAU-ycf15 5 GAGCCAGTTCCAATAGACCG TTCAGGGCCTATCCGAAAGA 20 20 55.0 50.0 58.1 58.1 0.0 5.3 0.184546 84996 87548 2765-2770 1.000000 78.7 trnL-CAA-ndhB_p1 trnL-CAA-ndhB 1 GTCTCGCGTGTCTACCATTT TGCAATTGCTCAGGATACCC 20 20 50.0 50.0 58.0 57.9 5.8 29.4 0.064968 88704 89279 509-636 1.000000 83.5 trnL-CAA-ndhB_p2 trnL-CAA-ndhB 2 CTCGCGTGTCTACCATTTCA TGCAATTGCTCAGGATACCC 20 20 50.0 50.0 58.0 57.9 5.8 29.4 0.066338 88704 89279 507-634 1.000000 83.5 trnL-CAA-ndhB_p3 trnL-CAA-ndhB 3 GCGTGTCTACCATTTCACCA TGCAATTGCTCAGGATACCC 20 20 50.0 50.0 58.2 57.9 0.0 29.4 0.253803 88704 89279 504-631 1.000000 82.0 trnL-CAA-ndhB_p4 trnL-CAA-ndhB 4 GTCTCGCGTGTCTACCATTT CCCCATTCTTGCAATTGCTC 20 20 50.0 50.0 58.0 57.7 5.8 29.4 0.312582 88704 89279 518-645 1.000000 81.5 trnL-CAA-ndhB_p5 trnL-CAA-ndhB 5 CTCGCGTGTCTACCATTTCA CCCCATTCTTGCAATTGCTC 20 20 50.0 50.0 58.0 57.7 5.8 29.4 0.313952 88704 89279 516-643 1.000000 81.5 ndhA_p1 ndhA 1 TGAACCCAGTTAGCATAGGGA ATGGGGGAAGTTGATCGTTG 21 20 47.6 50.0 58.2 57.9 2.9 0.0 1.288260 114364 116474 2251-2251 1.000000 69.7 ndhA_p2 ndhA 2 TGAACCCAGTTAGCATAGGGA GGGGGAAGTTGATCGTTGAA 21 20 47.6 50.0 58.2 57.8 2.9 0.0 1.353691 114364 116474 2249-2249 1.000000 69.2 ndhA_p3 ndhA 3 CCCAGTTAGCATAGGGAACA ATGGGGGAAGTTGATCGTTG 20 20 50.0 50.0 56.6 57.9 0.0 0.0 1.523804 114364 116474 2247-2247 1.000000 67.8 ndhA_p4 ndhA 4 TGAACCCAGTTAGCATAGGG ATGGGGGAAGTTGATCGTTG 20 20 50.0 50.0 56.6 57.9 0.0 0.0 1.523804 114364 116474 2251-2251 1.000000 67.8 ndhA_p5 ndhA 5 ACCCAGTTAGCATAGGGAAC ATGGGGGAAGTTGATCGTTG 20 20 50.0 50.0 56.6 57.9 2.9 0.0 1.526154 114364 116474 2248-2248 1.000000 67.8 ndhB-trnL-CAA_p1 ndhB-trnL-CAA 1 TGCAATTGCTCAGGATACCC GTCTCGCGTGTCTACCATTT 20 20 50.0 50.0 57.9 58.0 29.4 5.8 0.064968 133541 134116 509-636 1.000000 83.5 ndhB-trnL-CAA_p2 ndhB-trnL-CAA 2 TGCAATTGCTCAGGATACCC CTCGCGTGTCTACCATTTCA 20 20 50.0 50.0 57.9 58.0 29.4 5.8 0.066338 133541 134116 507-634 1.000000 83.5 ndhB-trnL-CAA_p3 ndhB-trnL-CAA 3 TGCAATTGCTCAGGATACCC GCGTGTCTACCATTTCACCA 20 20 50.0 50.0 57.9 58.2 29.4 0.0 0.253803 133541 134116 504-631 1.000000 82.0 ndhB-trnL-CAA_p4 ndhB-trnL-CAA 4 CCCCATTCTTGCAATTGCTC GTCTCGCGTGTCTACCATTT 20 20 50.0 50.0 57.7 58.0 29.4 5.8 0.312582 133541 134116 518-645 1.000000 81.5 ndhB-trnL-CAA_p5 ndhB-trnL-CAA 5 CCCCATTCTTGCAATTGCTC CTCGCGTGTCTACCATTTCA 20 20 50.0 50.0 57.7 58.0 29.4 5.8 0.313952 133541 134116 516-643 1.000000 81.5 ycf15-trnI-CAU_p1 ycf15-trnI-CAU 1 TTCAGGGCCTATCCGAAAGA GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 58.1 58.0 5.3 7.6 0.135071 135272 137824 2691-2696 1.000000 79.1 ycf15-trnI-CAU_p2 ycf15-trnI-CAU 2 CTCCGCGGATATCTTTGCTT GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 58.1 58.0 31.2 7.6 0.138121 135272 137824 2620-2625 1.000000 79.0 ycf15-trnI-CAU_p3 ycf15-trnI-CAU 3 GCGGATATCTTTGCTTCGGA GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 58.1 58.0 2.0 7.6 0.143336 135272 137824 2616-2621 1.000000 79.0 ycf15-trnI-CAU_p4 ycf15-trnI-CAU 4 TCCGCGGATATCTTTGCTTC GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 58.1 58.0 27.3 7.6 0.143336 135272 137824 2619-2624 1.000000 79.0 ycf15-trnI-CAU_p5 ycf15-trnI-CAU 5 TTCAGGGCCTATCCGAAAGA GAGCCAGTTCCAATAGACCG 20 20 50.0 55.0 58.1 58.1 5.3 0.0 0.184546 135272 137824 2765-2770 1.000000 78.7