primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 ATCCACAGCGAATCATGTCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 5618 6628 809-1111 1.000000 85.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 ATCCACAGCGAATCATGTCC GTCACTCGGAGGTTCGAATC 20 20 50.0 55.0 58.0 58.1 0.0 10.2 0.130271 5618 6628 817-1119 1.000000 85.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5618 6628 786-1088 1.000000 84.6 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA GTCACTCGGAGGTTCGAATC 20 20 45.0 55.0 58.1 58.1 8.1 10.2 0.228636 5618 6628 794-1096 1.000000 84.5 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 ATCCACAGCGAATCATGTCC CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.0 57.8 0.0 16.9 0.252311 5618 6628 813-1115 1.000000 84.3 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 AATCTGCCGCTTTAGTCCAC AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.3 56.4 0.0 0.0 1.897349 7918 8802 968-1031 1.000000 72.6 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 CAATCTGCCGCTTTAGTCCA AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.3 56.4 0.0 0.0 1.898577 7918 8802 969-1032 1.000000 72.6 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 AGATTAGCAATCTGCCGCTT AACCGAAAGACCCCTTAACT 20 20 45.0 45.0 57.7 56.4 9.6 0.0 1.974993 7918 8802 976-1039 1.000000 71.9 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CGGAGAGAGAGGGATTCGAA AACCGAAAGACCCCTTAACT 20 20 55.0 45.0 58.3 56.4 0.0 0.0 1.954878 7918 8802 1022-1085 1.000000 71.7 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 GCTTTAGTCCACTCAGCCAT AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 57.6 56.4 0.9 0.0 2.046364 7918 8802 960-1023 1.000000 71.4 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 TTGGCTGACTGTTTTTACGT ATGTATGCTATACGCGCCTC 20 20 40.0 50.0 55.8 57.7 0.0 5.7 2.461054 29536 30536 1189-1204 1.000000 63.6 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 TGGCTGACTGTTTTTACGTAGA ATGTATGCTATACGCGCCTC 22 20 40.9 50.0 57.7 57.7 0.0 5.7 2.604610 29536 30536 1188-1203 1.000000 62.4 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 TTGGCTGACTGTTTTTACGT TTCAATTGGTCAGAGCACCG 20 20 40.0 50.0 55.8 58.5 0.0 5.4 2.658804 29536 30536 1156-1171 1.000000 62.0 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 TTTGGCTGACTGTTTTTACGT ATGTATGCTATACGCGCCTC 21 20 38.1 50.0 56.6 57.7 0.0 5.7 2.688487 29536 30536 1190-1205 1.000000 61.8 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AGTGCGAGAATATTGACTTCCA ATGTATGCTATACGCGCCTC 22 20 40.9 50.0 57.5 57.7 0.0 5.7 2.751487 29536 30536 1116-1131 1.000000 61.5 psbC-trnS-UGA_p1 psbC-trnS-UGA 1 TTGTGGGTCATTTGTGGCAT GGTGGCTGAGTGGTTGATAG 20 20 45.0 55.0 58.3 58.0 0.0 0.0 0.315298 35004 35142 331-334 1.000000 80.6 psbC-trnS-UGA_p2 psbC-trnS-UGA 2 TTGTGGGTCATTTGTGGCAT GCTGAGTGGTTGATAGCTCC 20 20 45.0 55.0 58.3 58.1 0.0 0.0 0.338714 35004 35142 327-330 1.000000 80.5 psbC-trnS-UGA_p3 psbC-trnS-UGA 3 TTGTGGGTCATTTGTGGCAT GGCTGAGTGGTTGATAGCTC 20 20 45.0 55.0 58.3 58.1 0.0 0.0 0.338714 35004 35142 328-331 1.000000 80.5 psbC-trnS-UGA_p4 psbC-trnS-UGA 4 TTGTGGGTCATTTGTGGCAT GGTTGATAGCTCCGGTCTTG 20 20 45.0 55.0 58.3 58.1 0.0 0.0 0.344134 35004 35142 320-323 1.000000 80.5 psbC-trnS-UGA_p5 psbC-trnS-UGA 5 AGCTGCAGCAGGATTTGAAA GGTGGCTGAGTGGTTGATAG 20 20 45.0 55.0 58.4 58.0 38.2 0.0 0.405502 35004 35142 294-297 1.000000 80.3 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 45874 46850 584-1161 1.000000 86.2 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 45874 46850 592-1169 1.000000 85.6 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 45874 46850 616-1193 1.000000 85.2 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 45874 46850 624-1201 1.000000 84.7 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG ATCCAATCAAGTCCGTAGCG 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.357808 45874 46850 607-1184 1.000000 84.4 trnL-UAA-trnF-GAA_p1 trnL-UAA-trnF-GAA 1 TTCAAGTCCCTCTATCCCCA TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 57.0 58.1 0.0 20.1 1.013432 47440 47914 513-590 1.000000 80.8 trnL-UAA-trnF-GAA_p2 trnL-UAA-trnF-GAA 2 GTTCAAGTCCCTCTATCCCC TTTGAACTGGTGACACGAGG 20 20 55.0 50.0 56.7 58.1 0.0 20.1 1.356437 47440 47914 514-591 1.000000 78.1 trnL-UAA-trnF-GAA_p3 trnL-UAA-trnF-GAA 3 GGGTTCAAGTCCCTCTATCC TTTGAACTGGTGACACGAGG 20 20 55.0 50.0 56.7 58.1 0.0 20.1 1.356437 47440 47914 516-593 1.000000 78.0 trnL-UAA-trnF-GAA_p4 trnL-UAA-trnF-GAA 4 GGTTCAAGTCCCTCTATCCC TTTGAACTGGTGACACGAGG 20 20 55.0 50.0 56.7 58.1 0.0 20.1 1.356437 47440 47914 515-592 1.000000 78.0 trnL-UAA-trnF-GAA_p5 trnL-UAA-trnF-GAA 5 TTCAAGTCCCTCTATCCCCA TACCAACTGAGCTATCCCGA 20 20 50.0 50.0 57.0 57.6 0.0 0.0 1.408944 47440 47914 475-552 1.000000 78.0 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.180666 47988 48701 451-863 1.000000 85.6 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA ATCATCCACGCCTTAAACGT 20 20 50.0 45.0 58.1 57.6 0.0 0.0 0.448485 47988 48701 482-894 1.000000 83.5 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 TCGGGATAGCTCAGTTGGTA TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.576179 47988 48701 489-901 1.000000 82.3 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 AATCCTCGTGTCACCAGTTC TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 57.5 57.9 0.0 0.0 0.586136 47988 48701 454-866 1.000000 82.3 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CCTCGTGTCACCAGTTCAAA GAAAGTTGGATAGGCTGGCC 20 20 50.0 55.0 58.1 58.6 0.0 3.0 0.658293 47988 48701 450-862 1.000000 81.8 ycf4-cemA_p1 ycf4-cemA 1 ACAAAAAGCTGCGGAATTGG ATGAGAGAGAGACCCACCAG 20 20 45.0 55.0 57.8 57.8 0.0 0.0 0.311006 60592 61444 969-1010 1.000000 82.3 ycf4-cemA_p2 ycf4-cemA 2 ACAAAAAGCTGCGGAATTGG ATGCAAGATAGGGGAGGGAA 20 20 45.0 50.0 57.8 57.8 0.0 0.0 0.366118 60592 61444 933-974 1.000000 82.0 ycf4-cemA_p3 ycf4-cemA 3 ACAAAAAGCTGCGGAATTGG AGATGCAAGATAGGGGAGGG 20 20 45.0 55.0 57.8 58.3 0.0 0.0 0.413616 60592 61444 935-976 1.000000 81.6 ycf4-cemA_p4 ycf4-cemA 4 ACAAAAAGCTGCGGAATTGG GATGCAAGATAGGGGAGGGA 20 20 45.0 55.0 57.8 58.3 0.0 0.0 0.418712 60592 61444 934-975 1.000000 81.6 ycf4-cemA_p5 ycf4-cemA 5 TGCGGAATTGGCCTATTTCT ATGAGAGAGAGACCCACCAG 20 20 45.0 55.0 57.6 57.8 13.8 0.0 0.593012 60592 61444 960-1001 1.000000 80.0 rpl36-rps8_p1 rpl36-rps8 1 TCAGTCGGCACTTTTCACAA AGGCGGAATGGGAATTGTAA 20 20 45.0 45.0 58.0 57.2 0.0 0.0 0.850009 80317 80778 613-629 1.000000 78.0 rpl36-rps8_p2 rpl36-rps8 2 TCAGTCGGCACTTTTCACAA TTAGGCGGAATGGGAATTGT 20 20 45.0 45.0 58.0 57.2 0.0 0.0 0.850009 80317 80778 615-631 1.000000 78.0 rpl36-rps8_p3 rpl36-rps8 3 GGATCAGTCGGCACTTTTCA AGGCGGAATGGGAATTGTAA 20 20 50.0 45.0 58.2 57.2 0.0 0.0 1.010340 80317 80778 616-632 1.000000 76.7 rpl36-rps8_p4 rpl36-rps8 4 GGATCAGTCGGCACTTTTCA TTAGGCGGAATGGGAATTGT 20 20 50.0 45.0 58.2 57.2 0.0 0.0 1.010340 80317 80778 618-634 1.000000 76.7 rpl36-rps8_p5 rpl36-rps8 5 ATCAGTCGGCACTTTTCACA AGGCGGAATGGGAATTGTAA 20 20 45.0 45.0 57.7 57.2 0.0 0.0 1.073297 80317 80778 614-630 1.000000 76.2 trnH-GUG-rpl2_p1 trnH-GUG-rpl2 1 TGGATCAAGGCAGTGGATTG GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 57.9 58.0 0.0 22.4 0.157457 85094 85136 179-179 1.000000 80.1 trnH-GUG-rpl2_p2 trnH-GUG-rpl2 2 GGATCAAGGCAGTGGATTGT GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 57.9 58.0 0.0 22.4 0.158965 85094 85136 178-178 1.000000 80.1 trnH-GUG-rpl2_p3 trnH-GUG-rpl2 3 GTGGATCAAGGCAGTGGATT GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 57.9 58.0 0.0 22.4 0.158965 85094 85136 180-180 1.000000 80.1 trnH-GUG-rpl2_p4 trnH-GUG-rpl2 4 CGGATGTAGCCAAGTGGATC GTTATCCTGCGCTTGGAAGA 20 20 55.0 50.0 58.1 58.0 0.2 22.4 0.153095 85094 85136 193-193 1.000000 80.0 trnH-GUG-rpl2_p5 trnH-GUG-rpl2 5 CGGATGTAGCCAAGTGGATC CACAACCCCTTGGGGTTATC 20 20 55.0 55.0 58.1 58.2 0.2 35.0 0.281592 85094 85136 207-207 1.000000 78.9 ycf1-ndhF_p1 ycf1-ndhF 1 ACAGGAACAAGAGGGATCCA ATGGGGGAAGGGGTCAAATA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.053979 111123 111271 687-907 1.000000 88.1 ycf1-ndhF_p2 ycf1-ndhF 2 ACAGGAACAAGAGGGATCCA TGGGGGAAGGGGTCAAATAT 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.053979 111123 111271 686-906 1.000000 88.1 ycf1-ndhF_p3 ycf1-ndhF 3 AAGAGGGATCCACCGAAGAA ATGGGGGAAGGGGTCAAATA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.056565 111123 111271 679-899 1.000000 88.1 ycf1-ndhF_p4 ycf1-ndhF 4 AAGAGGGATCCACCGAAGAA TGGGGGAAGGGGTCAAATAT 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.056565 111123 111271 678-898 1.000000 88.1 ycf1-ndhF_p5 ycf1-ndhF 5 ACAGGAACAAGAGGGATCCA TATGGGGGAAGGGGTCAAAT 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.053979 111123 111271 703-908 0.952381 85.8 ndhF_p1 ndhF 1 AGTATCCCACGAAGACCTGT TGGGTGAATCGGAAACAATT 20 20 50.0 40.0 57.8 55.5 0.0 0.0 2.704085 111272 113497 2561-2775 1.000000 62.9 ndhF_p2 ndhF 2 ACAGGAACAAGAGGGATCCA AATGGGTGAATCGGAAACAA 20 20 50.0 40.0 58.0 55.5 15.2 0.0 2.515572 111272 113497 2872-2932 0.857143 58.2 ndhF_p3 ndhF 3 ACAGGAACAAGAGGGATCCA TGGGTGAATCGGAAACAATT 20 20 50.0 40.0 58.0 55.5 15.2 0.0 2.515572 111272 113497 2870-2930 0.857143 58.2 ndhF_p4 ndhF 4 AAGAGGGATCCACCGAAGAA AATGGGTGAATCGGAAACAA 20 20 50.0 40.0 58.0 55.5 15.2 0.0 2.518158 111272 113497 2864-2924 0.857143 58.2 ndhF_p5 ndhF 5 AAGAGGGATCCACCGAAGAA TGGGTGAATCGGAAACAATT 20 20 50.0 40.0 58.0 55.5 15.2 0.0 2.518158 111272 113497 2862-2922 0.857143 58.2 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AGAATGGTCCATTTTGAGCA AAAAAGGGGGCCCATTACAG 20 20 40.0 50.0 55.2 58.0 18.3 24.8 2.838360 114374 114874 757-1066 0.666667 48.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGAATGGTCCATTTTGAGCA AGCGTGTCTACCGATTTCAC 20 20 40.0 50.0 55.2 58.0 18.3 0.0 2.797400 114374 114874 623-931 0.666667 48.3 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGAATGGTCCATTTTGAGCA CAGCGTGTCTACCGATTTCA 20 20 40.0 50.0 55.2 58.0 18.3 0.0 2.798771 114374 114874 624-932 0.666667 48.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGAATGGTCCATTTTGAGCA CATCCCCTTTTCCGACGAAT 20 20 40.0 50.0 55.2 58.0 18.3 0.0 2.827957 114374 114874 893-1202 0.666667 48.0 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGAATGGTCCATTTTGAGCA TGGCGAAACCTTGGGTAAAA 20 20 40.0 45.0 55.2 57.9 18.3 0.0 2.858404 114374 114874 1098-1407 0.666667 47.4 ndhE-ndhG_p1 ndhE-ndhG 1 TGCTCTAACCATGTTTCGACT AGGTGCAATTACTATGGCTCG 21 21 42.9 47.6 57.3 58.2 0.0 0.0 2.839321 118793 118980 305-314 1.000000 62.0 ndhE-ndhG_p2 ndhE-ndhG 2 AGTGCTCTAACCATGTTTCGA AGGTGCAATTACTATGGCTCG 21 21 42.9 47.6 57.3 58.2 0.0 0.0 2.839321 118793 118980 307-316 1.000000 61.9 ndhE-ndhG_p3 ndhE-ndhG 3 GTGCTCTAACCATGTTTCGAC AGGTGCAATTACTATGGCTCG 21 21 47.6 47.6 57.3 58.2 0.0 0.0 2.885559 118793 118980 306-315 1.000000 61.6 ndhE-ndhG_p4 ndhE-ndhG 4 AGTGCTCTAACCATGTTTCGA GGTGCAATTACTATGGCTCG 21 20 42.9 50.0 57.3 56.7 0.0 0.0 3.006925 118793 118980 306-315 1.000000 60.6 ndhE-ndhG_p5 ndhE-ndhG 5 TGCTCTAACCATGTTTCGACT GGTGCAATTACTATGGCTCG 21 20 42.9 50.0 57.3 56.7 0.0 0.0 3.006925 118793 118980 304-313 1.000000 60.6 rps15_p1 rps15 1 TTTCCAATCGTTCTGGTGCA ACAACGGCAGTCATTTCAGT 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.058416 123861 124130 1071-1086 1.000000 84.4 rps15_p2 rps15 2 TTTCCAATCGTTCTGGTGCA CCAACAACGGCAGTCATTTC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.076212 123861 124130 1074-1089 1.000000 84.2 rps15_p3 rps15 3 TTTCCAATCGTTCTGGTGCA CCGAAAGATATATGCCCGCA 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.119041 123861 124130 959-973 1.000000 84.2 rps15_p4 rps15 4 CCACCGTGTTACATAAGGCA ACAACGGCAGTCATTTCAGT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.134751 123861 124130 1010-1025 1.000000 84.0 rps15_p5 rps15 5 TTTCTTGTAGCCGGTACAGC ACAACGGCAGTCATTTCAGT 20 20 50.0 45.0 57.9 58.0 10.2 0.0 0.121631 123861 124130 823-838 0.619048 69.3 rps15-ycf1_p1 rps15-ycf1 1 CGTATGACCATCGAGGAACC ACATTTGACTTTGGCGAGGA 20 20 55.0 45.0 57.9 57.7 0.0 0.0 0.406016 128204 128323 229-229 1.000000 80.9 rps15-ycf1_p2 rps15-ycf1 2 CGTATGACCATCGAGGAACC TTGACTTTGGCGAGGAATCA 20 20 55.0 45.0 57.9 57.4 0.0 0.0 0.695362 128204 128323 225-225 1.000000 78.7 rps15-ycf1_p3 rps15-ycf1 3 CGTATGACCATCGAGGAACC TGACTTTGGCGAGGAATCAT 20 20 55.0 45.0 57.9 57.2 0.0 0.0 0.923137 128204 128323 224-224 1.000000 76.9 rps15-ycf1_p4 rps15-ycf1 4 CGTATGACCATCGAGGAACC TGACTTTGGCGAGGAATCATT 20 21 55.0 42.9 57.9 57.9 0.0 0.0 1.207538 128204 128323 224-224 1.000000 74.6 rps15-ycf1_p5 rps15-ycf1 5 CGTATGACCATCGAGGAACC TTGACTTTGGCGAGGAATCAT 20 21 55.0 42.9 57.9 57.9 0.0 0.0 1.207538 128204 128323 225-225 1.000000 74.6 rpl2-trnH-GUG_p1 rpl2-trnH-GUG 1 GTTATCCTGCGCTTGGAAGA TGGATCAAGGCAGTGGATTG 20 20 50.0 50.0 58.0 57.9 22.4 0.0 0.157457 154883 154925 179-179 1.000000 80.1 rpl2-trnH-GUG_p2 rpl2-trnH-GUG 2 GTTATCCTGCGCTTGGAAGA GGATCAAGGCAGTGGATTGT 20 20 50.0 50.0 58.0 57.9 22.4 0.0 0.158965 154883 154925 178-178 1.000000 80.1 rpl2-trnH-GUG_p3 rpl2-trnH-GUG 3 GTTATCCTGCGCTTGGAAGA GTGGATCAAGGCAGTGGATT 20 20 50.0 50.0 58.0 57.9 22.4 0.0 0.158965 154883 154925 180-180 1.000000 80.1 rpl2-trnH-GUG_p4 rpl2-trnH-GUG 4 GTTATCCTGCGCTTGGAAGA CGGATGTAGCCAAGTGGATC 20 20 50.0 55.0 58.0 58.1 22.4 0.2 0.153095 154883 154925 193-193 1.000000 80.0 rpl2-trnH-GUG_p5 rpl2-trnH-GUG 5 CACAACCCCTTGGGGTTATC CGGATGTAGCCAAGTGGATC 20 20 55.0 55.0 58.2 58.1 35.0 0.2 0.281592 154883 154925 207-207 1.000000 78.9