primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU_p1 trnK-UUU 1 GCAAAACTCAGATTGCTCTT GAGCGTCCGGTGTAATTTCA 20 20 40.0 50.0 54.5 58.3 11.2 0.0 3.791952 1415 3992 2659-2661 1.000000 50.2 trnK-UUU_p2 trnK-UUU 2 GCAAAACTCAGATTGCTCTT AGCGTCCGGTGTAATTTCAT 20 20 40.0 45.0 54.5 57.6 11.2 0.0 3.905735 1415 3992 2658-2660 1.000000 49.3 trnK-UUU_p3 trnK-UUU 3 GCAAAACTCAGATTGCTCTTT GAGCGTCCGGTGTAATTTCA 21 20 38.1 50.0 55.3 58.3 11.2 0.0 3.961568 1415 3992 2659-2661 1.000000 48.8 trnK-UUU_p4 trnK-UUU 4 GCAAAACTCAGATTGCTCTT ATGTTTTGACAGGAGCGTCC 20 20 40.0 50.0 54.5 58.5 11.2 0.0 3.985388 1415 3992 2671-2673 1.000000 48.6 trnK-UUU_p5 trnK-UUU 5 GCAAAACTCAGATTGCTCTTT AGCGTCCGGTGTAATTTCAT 21 20 38.1 45.0 55.3 57.6 11.2 0.0 4.075351 1415 3992 2658-2660 1.000000 47.9 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CCGCACTTAAAAGCCGAGTA GGTGCTCAACCTACAAGAACA 20 21 50.0 47.6 58.3 58.2 5.3 0.0 1.436613 3993 4565 689-710 1.000000 71.5 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CTTAGCCGCACTTAAAAGCC GGTGCTCAACCTACAAGAACA 20 21 50.0 47.6 57.5 58.2 0.0 0.0 1.698287 3993 4565 694-715 1.000000 69.4 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCGCACTTAAAAGCCGAGTA GGTGCTCAACCTACAAGAAC 20 20 50.0 50.0 58.3 56.4 5.3 0.0 1.920462 3993 4565 689-710 1.000000 67.6 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CGCACTTAAAAGCCGAGTAC GGTGCTCAACCTACAAGAACA 20 21 50.0 47.6 57.2 58.2 0.0 0.0 1.936005 3993 4565 688-709 1.000000 67.5 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCTACCAAGAGTCTGGACGA GGTGCTCAACCTACAAGAACA 20 21 50.0 47.6 57.1 58.2 13.6 0.0 2.026901 3993 4565 745-766 1.000000 66.5 trnS-UGA-psbZ_p1 trnS-UGA-psbZ 1 CAACCACTCAGCCATCTCTC CCAACCATCAGGAGAAGCAA 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.226377 11593 11969 497-497 1.000000 79.0 trnS-UGA-psbZ_p2 trnS-UGA-psbZ 2 GAGCTATCAACCACTCAGCC CCAACCATCAGGAGAAGCAA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.258277 11593 11969 504-504 1.000000 78.7 trnS-UGA-psbZ_p3 trnS-UGA-psbZ 3 GGAGCTATCAACCACTCAGC CCAACCATCAGGAGAAGCAA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.258277 11593 11969 505-505 1.000000 78.7 trnS-UGA-psbZ_p4 trnS-UGA-psbZ 4 CAAGACCGGAGCTATCAACC CCAACCATCAGGAGAAGCAA 20 20 55.0 50.0 58.1 57.8 9.5 0.0 0.263697 11593 11969 512-512 1.000000 78.7 trnS-UGA-psbZ_p5 trnS-UGA-psbZ 5 CAACCACTCAGCCATCTCTC GACCAACCATCAGGAGAAGC 20 20 55.0 55.0 58.0 58.3 0.0 0.0 0.277359 11593 11969 499-499 1.000000 78.6 trnT-GGU-trnE-UUC_p1 trnT-GGU-trnE-UUC 1 GACAGAAGTCATCGGTTCGA TGTCCTGAACCACTAGACGA 20 20 50.0 50.0 57.4 57.7 0.0 0.0 0.912957 15882 16351 526-528 1.000000 78.6 trnT-GGU-trnE-UUC_p2 trnT-GGU-trnE-UUC 2 GACAGAAGTCATCGGTTCGA GCTGCCTCCTTGAAAGAGAG 20 20 50.0 55.0 57.4 58.3 0.0 0.0 0.894807 15882 16351 547-549 1.000000 78.5 trnT-GGU-trnE-UUC_p3 trnT-GGU-trnE-UUC 3 GACAGAAGTCATCGGTTCGA CCTGAACCACTAGACGATGG 20 20 50.0 55.0 57.4 57.4 0.0 0.0 1.217676 15882 16351 523-525 1.000000 76.2 trnT-GGU-trnE-UUC_p4 trnT-GGU-trnE-UUC 4 GACAGAAGTCATCGGTTCGA CTGAACCACTAGACGATGGG 20 20 50.0 55.0 57.4 57.4 0.0 0.0 1.217676 15882 16351 522-524 1.000000 76.2 trnT-GGU-trnE-UUC_p5 trnT-GGU-trnE-UUC 5 GACAGAAGTCATCGGTTCGAA GCTGCCTCCTTGAAAGAGAG 21 20 47.6 55.0 58.1 58.3 0.0 0.0 1.320679 15882 16351 547-549 1.000000 75.1 trnE-UUC-trnY-GUA_p1 trnE-UUC-trnY-GUA 1 ACGGTGCTATCGTCTAGTGA CGAATTTACAGTCCGTCCCC 20 20 50.0 55.0 58.0 58.4 0.0 0.0 0.385600 16425 16485 198-198 1.000000 77.3 trnE-UUC-trnY-GUA_p2 trnE-UUC-trnY-GUA 2 ACGGTGCTATCGTCTAGTGA ACGAATTTACAGTCCGTCCC 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.409277 16425 16485 199-199 1.000000 77.1 trnE-UUC-trnY-GUA_p3 trnE-UUC-trnY-GUA 3 CTCTCTTTCAAGGAGGCAGC CGAATTTACAGTCCGTCCCC 20 20 55.0 55.0 58.3 58.4 0.0 0.0 0.614884 16425 16485 149-149 1.000000 75.6 trnE-UUC-trnY-GUA_p4 trnE-UUC-trnY-GUA 4 ACGGTGCTATCGTCTAGTGA CAAATTTTTGGGCCGAGCTG 20 20 50.0 50.0 58.0 58.6 0.0 0.0 0.602609 16425 16485 247-247 1.000000 75.5 trnE-UUC-trnY-GUA_p5 trnE-UUC-trnY-GUA 5 TCGTCTAGTGGTTCAGGACA CGAATTTACAGTCCGTCCCC 20 20 50.0 55.0 57.7 58.4 0.0 0.0 0.633035 16425 16485 170-170 1.000000 75.4 petN-rpoB_p1 petN-rpoB 1 AGCCCAAGCGAGACTTACTA CTTCTCAAGTTCTTCCGCCA 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.321181 18847 20601 1876-1893 1.000000 78.7 petN-rpoB_p2 petN-rpoB 2 AGCCCAAGCGAGACTTACTA TCTCAAGTTCTTCCGCCAAG 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.321181 18847 20601 1874-1891 1.000000 78.7 petN-rpoB_p3 petN-rpoB 3 AGCCCAAGCGAGACTTACTA ACTTCTCAAGTTCTTCCGCC 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.322689 18847 20601 1877-1894 1.000000 78.7 petN-rpoB_p4 petN-rpoB 4 AGCCCAAGCGAGACTTACTA TTCCGCCAAGCCTTGATTAA 20 20 50.0 45.0 58.2 57.8 0.0 5.9 0.359480 18847 20601 1864-1881 1.000000 78.4 petN-rpoB_p5 petN-rpoB 5 AGCCCAAGCGAGACTTACTA CTTCCGCCAAGCCTTGATTA 20 20 50.0 50.0 58.2 58.2 0.0 5.9 0.401155 18847 20601 1865-1882 1.000000 78.1 rpoC2-rps2_p1 rpoC2-rps2 1 GAGACCCCGTTTACCCCTAT ACCAAAATGAACTCCCGCTT 20 20 55.0 45.0 58.2 58.0 0.0 0.0 0.205998 30686 30999 410-410 1.000000 79.3 rpoC2-rps2_p2 rpoC2-rps2 2 AGACCCCGTTTACCCCTATT ACCAAAATGAACTCCCGCTT 20 20 50.0 45.0 57.7 58.0 0.0 0.0 0.279985 30686 30999 409-409 1.000000 78.7 rpoC2-rps2_p3 rpoC2-rps2 3 CATCAGAGACCCCGTTTACC ACCAAAATGAACTCCCGCTT 20 20 55.0 45.0 57.7 58.0 0.0 0.0 0.315748 30686 30999 415-415 1.000000 78.4 rpoC2-rps2_p4 rpoC2-rps2 4 GAGACCCCGTTTACCCCTAT TTTACGCTTTGCCGAGATGT 20 20 55.0 45.0 58.2 58.2 0.0 0.0 0.398040 30686 30999 467-467 1.000000 77.7 rpoC2-rps2_p5 rpoC2-rps2 5 GAGACCCCGTTTACCCCTAT GGGGACATTTTGGGATTCCA 20 20 55.0 50.0 58.2 57.8 0.0 4.8 0.447465 30686 30999 445-445 1.000000 77.3 ycf3_p1 ycf3 1 TCTTCAACCAAACCACCCTT TCTATATAGAATGGGTTGGGA 20 21 45.0 38.1 57.2 52.5 0.0 10.1 7.347617 43387 45397 2077-2093 1.000000 40.7 ycf3_p2 ycf3 2 TCTTCAACCAAACCACCCTT TCTATATAGAATGGGTTGGGAA 20 22 45.0 36.4 57.2 53.4 0.0 10.1 7.420392 43387 45397 2077-2093 1.000000 40.7 ycf3_p3 ycf3 3 TCTTCAACCAAACCACCCTT TTCTATATAGAATGGGTTGGGA 20 22 45.0 36.4 57.2 53.4 0.0 19.2 7.420392 43387 45397 2078-2094 1.000000 40.7 ycf3_p4 ycf3 4 TCTTCAACCAAACCACCCTT TTCTATATAGAATGGGTTGGGAA 20 23 45.0 34.8 57.2 54.3 0.0 19.2 7.575905 43387 45397 2078-2094 1.000000 40.7 ycf3_p5 ycf3 5 ATCTTCAACCAAACCACCCT TCTATATAGAATGGGTTGGGA 20 21 45.0 38.1 56.9 52.5 0.0 10.1 7.581353 43387 45397 2078-2094 1.000000 40.7 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.180666 49125 49719 705-726 1.000000 79.1 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 ATGCACAAGAAAGGGTCAGG TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.213630 49125 49719 758-779 1.000000 78.8 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA ATAGGCTGGCCCTTACGTAA 20 20 50.0 50.0 58.1 58.2 0.0 7.9 0.254575 49125 49719 695-716 1.000000 78.5 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 ATGCACAAGAAAGGGTCAGG ATAGGCTGGCCCTTACGTAA 20 20 50.0 50.0 58.1 58.2 0.0 7.9 0.287539 49125 49719 748-769 1.000000 78.2 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 GCACAAGAAAGGGTCAGGAT TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.335347 49125 49719 756-777 1.000000 77.8 petA-psbJ_p1 petA-psbJ 1 GGCCTTTTGTTCTTCTTCGC ACGGTTCGTATTCTGGATTGG 20 21 50.0 47.6 57.9 58.1 0.0 0.0 1.150630 61690 62593 1040-1041 1.000000 71.6 petA-psbJ_p2 petA-psbJ 2 GGCCTTTTGTTCTTCTTCGC GGTTCGTATTCTGGATTGGGT 20 21 50.0 47.6 57.9 57.7 0.0 0.0 1.329021 61690 62593 1038-1039 1.000000 70.2 petA-psbJ_p3 petA-psbJ 3 GGCCTTTTGTTCTTCTTCGC CGGTTCGTATTCTGGATTGG 20 20 50.0 50.0 57.9 56.3 0.0 0.0 1.732360 61690 62593 1039-1040 1.000000 67.0 petA-psbJ_p4 petA-psbJ 4 CGTCCAAGGCCTTTTGTTCT ACGGTTCGTATTCTGGATTGG 20 21 50.0 47.6 58.7 58.1 17.6 0.0 1.780175 61690 62593 1047-1048 1.000000 66.6 petA-psbJ_p5 petA-psbJ 5 GGCCTTTTGTTCTTCTTCGC CGGTTCGTATTCTGGATTGGG 20 21 50.0 52.4 57.9 58.8 0.0 0.0 1.841762 61690 62593 1039-1040 1.000000 66.1 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 TCCCCACTACTGCCCATAAA AAACCTGCTAAAGCCCCAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.121576 65416 65795 567-567 1.000000 79.7 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 AAAACAAACGCGCTACCAAG AAACCTGCTAAAGCCCCAAA 20 20 45.0 45.0 57.9 57.9 5.7 0.0 0.209515 65416 65795 490-490 1.000000 79.1 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 CAAAACAAACGCGCTACCAA AAACCTGCTAAAGCCCCAAA 20 20 45.0 45.0 58.2 57.9 5.7 0.0 0.266772 65416 65795 491-491 1.000000 78.7 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 TTGTACCCAAAACAAACGCG AAACCTGCTAAAGCCCCAAA 20 20 45.0 45.0 57.8 57.9 3.5 0.0 0.285929 65416 65795 498-498 1.000000 78.5 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 CCCCACTACTGCCCATAAAG AAACCTGCTAAAGCCCCAAA 20 20 55.0 45.0 57.7 57.9 0.0 0.0 0.444015 65416 65795 566-566 1.000000 77.2 rpl20-rps12_p1 rpl20-rps12 1 ACGCATTTTTGTTCGTCGTC CGACATGCCAACGGTTAAAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.054869 67855 68538 855-856 1.000000 79.9 rpl20-rps12_p2 rpl20-rps12 2 GTTTGAGGCAAATGAACGCA CGACATGCCAACGGTTAAAC 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.174323 67855 68538 870-871 1.000000 79.0 rpl20-rps12_p3 rpl20-rps12 3 ACGCATTTTTGTTCGTCGTC TGCAAGACAGCCAATACGAA 20 20 45.0 45.0 58.0 57.8 0.0 0.0 0.190679 67855 68538 822-823 1.000000 78.9 rpl20-rps12_p4 rpl20-rps12 4 TTTTTGTTCGTCGTCTCCGA CGACATGCCAACGGTTAAAC 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.248398 67855 68538 850-851 1.000000 78.4 rpl20-rps12_p5 rpl20-rps12 5 ACGCATTTTTGTTCGTCGTC GAACATGCGCTAGGGTGTAT 20 20 45.0 50.0 58.0 57.8 0.0 9.7 0.253779 67855 68538 757-758 1.000000 78.4 psbT-psbN_p1 psbT-psbN 1 TCTTCTTCCGAGAACCACCT TCGCCATCTCCATATCTGGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.026579 71734 71805 226-226 1.000000 80.5 psbT-psbN_p2 psbT-psbN 2 TTCCGAGAACCACCTAAGGT TCGCCATCTCCATATCTGGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.035264 71734 71805 221-221 1.000000 80.4 psbT-psbN_p3 psbT-psbN 3 TCTTCTTCCGAGAACCACCT CCATTCGAAGAACATGGGGA 20 20 50.0 50.0 58.0 57.6 0.0 3.3 0.429490 71734 71805 137-137 1.000000 77.7 psbT-psbN_p4 psbT-psbN 4 TCTTCTTCCGAGAACCACCT GTCGCCATCTCCATATCTGG 20 20 50.0 55.0 58.0 57.6 0.0 0.0 0.387930 71734 71805 227-227 1.000000 77.6 psbT-psbN_p5 psbT-psbN 5 TTCCGAGAACCACCTAAGGT GTCGCCATCTCCATATCTGG 20 20 50.0 55.0 58.0 57.6 0.0 0.0 0.396615 71734 71805 222-222 1.000000 77.5 rpl16_p1 rpl16 1 TCCAGAAAGAAAAACCAGGGG AGAAGAAAGTATCCCTCTTTC 21 21 47.6 38.1 58.0 52.3 0.0 9.5 7.771483 78765 80261 1614-1628 1.000000 40.4 rpl16_p2 rpl16 2 TCCAGAAAGAAAAACCAGGGG AAGAAGAAAGTATCCCTCTTTC 21 22 47.6 36.4 58.0 53.2 0.0 9.5 7.856959 78765 80261 1615-1629 1.000000 40.4 rpl16_p3 rpl16 3 TCCAGAAAGAAAAACCAGGGG AAAGAAGAAAGTATCCCTCTTTC 21 23 47.6 34.8 58.0 54.0 0.0 9.5 8.022126 78765 80261 1616-1630 1.000000 40.4 rpl16_p4 rpl16 4 CCAGAAAGAAAAACCAGGGGT AGAAGAAAGTATCCCTCTTTC 21 21 47.6 38.1 58.3 52.3 0.0 9.5 8.051043 78765 80261 1613-1627 1.000000 40.4 rpl16_p5 rpl16 5 CCAGAAAGAAAAACCAGGGGT AAGAAGAAAGTATCCCTCTTTC 21 22 47.6 36.4 58.3 53.2 0.0 9.5 8.136519 78765 80261 1614-1628 1.000000 40.4 ndhF-rpl32_p1 ndhF-rpl32 1 CTGGAAGTGGGAGAAGAGGA TCCAAAGATTTTTACGAATACGCT 20 24 55.0 33.3 58.1 57.3 0.0 0.0 4.786783 106606 107460 968-988 1.000000 42.5 ndhF-rpl32_p2 ndhF-rpl32 2 CTGGAAGTGGGAGAAGAGGA TGACATCGAAGTACGTTTTT 20 20 55.0 35.0 58.1 53.2 0.0 0.0 4.822578 106606 107460 940-960 1.000000 42.3 ndhF-rpl32_p3 ndhF-rpl32 3 CTGGAAGTGGGAGAAGAGGA TTGACATCGAAGTACGTTTT 20 20 55.0 35.0 58.1 53.2 0.0 0.0 4.822578 106606 107460 941-961 1.000000 42.3 ndhF-rpl32_p4 ndhF-rpl32 4 CTGGAAGTGGGAGAAGAGGA TTTGACATCGAAGTACGTTT 20 20 55.0 35.0 58.1 53.2 0.0 0.0 4.822578 106606 107460 942-962 1.000000 42.3 ndhF-rpl32_p5 ndhF-rpl32 5 CTGGAAGTGGGAGAAGAGGA TTTTGACATCGAAGTACGTT 20 20 55.0 35.0 58.1 53.2 0.0 0.0 4.822578 106606 107460 943-963 1.000000 42.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGTTTTTCTGGGCAACAAGC TTCGAACCGAGATGCTTGAG 20 20 50.0 50.0 58.4 58.0 0.0 0.0 0.421775 107641 108174 630-633 1.000000 77.5 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGTTTTTCTGGGCAACAAGC GGATTCGAACCGAGATGCTT 20 20 50.0 50.0 58.4 58.1 0.0 0.0 0.476741 107641 108174 633-636 1.000000 77.1 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGTTTTTCTGGGCAACAAGC TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.4 57.9 0.0 0.0 0.542343 107641 108174 603-606 1.000000 76.6 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGTTTTTCTGGGCAACAAGC AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.4 57.8 0.0 0.0 0.603070 107641 108174 596-599 1.000000 76.1 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGTTTTTCTGGGCAACAAGC GCTTGAGCACTGCTTCCTAA 20 20 50.0 50.0 58.4 58.2 0.0 4.7 0.604553 107641 108174 617-620 1.000000 76.1 ccsA_p1 ccsA 1 CTCAAGCATCTCGGTTCGAA TTGAGAACCCCTTGAACGTC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.253552 108332 109297 1159-1159 1.000000 78.5 ccsA_p2 ccsA 2 AAGCATCTCGGTTCGAATCC TTGAGAACCCCTTGAACGTC 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.308519 108332 109297 1156-1156 1.000000 78.0 ccsA_p3 ccsA 3 CTCAAGCATCTCGGTTCGAA GAGAACCCCTTGAACGTCTT 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.549246 108332 109297 1157-1157 1.000000 76.1 ccsA_p4 ccsA 4 CTCAAGCATCTCGGTTCGAA TGAGAACCCCTTGAACGTCT 20 20 50.0 50.0 58.0 58.6 0.0 0.0 0.583279 108332 109297 1158-1158 1.000000 75.8 ccsA_p5 ccsA 5 AAGCATCTCGGTTCGAATCC GAGAACCCCTTGAACGTCTT 20 20 50.0 50.0 58.1 57.5 0.0 0.0 0.604212 108332 109297 1154-1154 1.000000 75.7