primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG TGGAAACAAATTGCGTCCAA 20 20 50.0 40.0 58.0 56.7 0.0 13.8 1.287186 10835 11003 287-296 1.000000 75.5 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG TGGAAACAAATTGCGTCCAA 20 20 55.0 40.0 58.1 56.7 0.0 13.8 1.316022 10835 11003 290-299 1.000000 75.2 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 CCCTAGCCTTCCAAGCTAAC TGGAAACAAATTGCGTCCAA 20 20 55.0 40.0 57.7 56.7 0.0 13.8 1.591036 10835 11003 291-300 1.000000 73.0 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CTAACGATGCGGGTTCGATT TGGAAACAAATTGCGTCCAA 20 20 50.0 40.0 58.4 56.7 0.0 13.8 1.689844 10835 11003 276-285 1.000000 72.5 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 TGACGTCGACTATAACCCCT TGGAAACAAATTGCGTCCAA 20 20 50.0 40.0 57.6 56.7 14.7 13.8 1.682491 10835 11003 307-316 1.000000 71.9 rpl14-rpl16_p1 rpl14-rpl16 1 CGCTGTTGTCCGCTACATTT GCGTCCAAAATGCCTATACG 20 20 50.0 50.0 59.2 57.3 0.0 0.0 1.866967 84491 84632 218-230 1.000000 73.3 rpl14-rpl16_p2 rpl14-rpl16 2 CGCTGTTGTCCGCTACATT GCGTCCAAAATGCCTATACG 19 20 52.6 50.0 58.5 57.3 0.0 0.0 2.207279 84491 84632 218-230 1.000000 70.6 rpl14-rpl16_p3 rpl14-rpl16 3 CGCTGTTGTCCGCTACATTT ATAGCTGCGTCCAAAATGCC 20 20 50.0 50.0 59.2 59.3 0.0 0.0 2.462951 84491 84632 224-236 1.000000 68.5 rpl14-rpl16_p4 rpl14-rpl16 4 CGCTGTTGTCCGCTACATTT GCTGCGTCCAAAATGCCTAT 20 20 50.0 50.0 59.2 59.3 0.0 0.0 2.462951 84491 84632 221-233 1.000000 68.5 rpl14-rpl16_p5 rpl14-rpl16 5 CGCTGTTGTCCGCTACATTT CTATAGCTGCGTCCAAAATGC 20 21 50.0 47.6 59.2 57.7 0.0 0.0 2.462894 84491 84632 226-238 1.000000 68.4 ycf1_p1 ycf1 1 TGCACCAAACCATAGCTGTT GACATACTGAAACGACTCCCA 20 21 45.0 47.6 58.0 57.4 0.0 0.0 1.593841 118510 118629 445-445 0.500000 47.2 ycf1_p2 ycf1 2 TGCACCAAACCATAGCTGTT TGACATACTGAAACGACTCCC 20 21 45.0 47.6 58.0 57.4 0.0 0.0 1.593841 118510 118629 446-446 0.500000 47.2 ycf1_p3 ycf1 3 TGATTATTGAACCAGCCCGG GACATACTGAAACGACTCCCA 20 21 50.0 47.6 57.9 57.4 0.0 0.0 1.639131 118510 118629 496-496 0.500000 46.9 ycf1_p4 ycf1 4 TGATTATTGAACCAGCCCGG TGACATACTGAAACGACTCCC 20 21 50.0 47.6 57.9 57.4 0.0 0.0 1.639131 118510 118629 497-497 0.500000 46.9 ycf1_p5 ycf1 5 ACACCATCCAGTGCAAAGAG GACATACTGAAACGACTCCCA 20 21 50.0 47.6 58.1 57.4 0.0 0.0 1.686206 118510 118629 885-885 0.500000 46.5 rps15-ndhH_p1 rps15-ndhH 1 TCGGGAGCTCAAAATTCGTT CCTCTCCACCAATAATGCCC 20 20 45.0 55.0 57.8 58.0 17.2 0.0 0.192030 119467 119643 836-836 0.500000 58.5 rps15-ndhH_p2 rps15-ndhH 2 TTCGGGAGCTCAAAATTCGT CCTCTCCACCAATAATGCCC 20 20 45.0 55.0 57.8 58.0 17.2 0.0 0.192030 119467 119643 837-837 0.500000 58.5 rps15-ndhH_p3 rps15-ndhH 3 TCGGGAGCTCAAAATTCGTT CCCCTTCAACTCGTTCCAAA 20 20 45.0 50.0 57.8 58.0 17.2 0.0 0.203252 119467 119643 815-815 0.500000 58.4 rps15-ndhH_p4 rps15-ndhH 4 TTCGGGAGCTCAAAATTCGT CCCCTTCAACTCGTTCCAAA 20 20 45.0 50.0 57.8 58.0 17.2 0.0 0.203252 119467 119643 816-816 0.500000 58.4 rps15-ndhH_p5 rps15-ndhH 5 TCGGGAGCTCAAAATTCGTT ATCCAGCCATAGGGGAGATC 20 20 45.0 55.0 57.8 58.0 17.2 0.0 0.214927 119467 119643 714-714 0.500000 58.3 ndhH_p1 ndhH 1 TCGGGAGCTCAAAATTCGTT ACCCCTATACTGAGATCGGC 20 20 45.0 55.0 57.8 58.1 17.2 0.0 0.252804 119644 120825 1774-1774 0.500000 58.0 ndhH_p2 ndhH 2 TTCGGGAGCTCAAAATTCGT ACCCCTATACTGAGATCGGC 20 20 45.0 55.0 57.8 58.1 17.2 0.0 0.252804 119644 120825 1775-1775 0.500000 58.0 ndhH_p3 ndhH 3 TCGGGAGCTCAAAATTCGTT ATACGTTGTTGTACCCCTGC 20 20 45.0 50.0 57.8 57.9 17.2 0.0 0.282449 119644 120825 1567-1567 0.500000 57.7 ndhH_p4 ndhH 4 TTCGGGAGCTCAAAATTCGT ATACGTTGTTGTACCCCTGC 20 20 45.0 50.0 57.8 57.9 17.2 0.0 0.282449 119644 120825 1568-1568 0.500000 57.7 ndhH_p5 ndhH 5 TCGGGAGCTCAAAATTCGTT CAACGAATCGCACGTAGAGA 20 20 45.0 50.0 57.8 58.1 17.2 1.2 0.287734 119644 120825 1948-1948 0.500000 57.7 ndhA_p1 ndhA 1 ACCTTCGCCCACTTTTGAAT CGCCCCAAAGCAATTTGATT 20 20 45.0 45.0 58.0 57.9 0.0 0.0 0.102303 120827 122820 2745-2745 0.500000 59.2 ndhA_p2 ndhA 2 ACCTTCGCCCACTTTTGAAT CTCACCACCCCATAGTTTGG 20 20 45.0 55.0 58.0 57.9 0.0 0.0 0.133394 120827 122820 2941-2941 0.500000 58.9 ndhA_p3 ndhA 3 CAGGCTCTGGAAGGAATTCC CGCCCCAAAGCAATTTGATT 20 20 55.0 45.0 58.0 57.9 17.3 0.0 0.147568 120827 122820 2858-2858 0.500000 58.8 ndhA_p4 ndhA 4 CGATCGGAGTGTTTTTCCCT CGCCCCAAAGCAATTTGATT 20 20 50.0 45.0 57.9 57.9 7.4 0.0 0.192442 120827 122820 2658-2658 0.500000 58.5 ndhA_p5 ndhA 5 ACCTTCGCCCACTTTTGAAT GACCGATATACCTTGCAGCC 20 20 45.0 55.0 58.0 58.2 0.0 0.0 0.207599 120827 122820 2384-2384 0.500000 58.3 ndhG_p1 ndhG 1 AATCAAATTGCTTTGGGGCG TAAAGAAAAGAACGGGCCCC 20 20 45.0 50.0 57.9 58.1 0.0 18.7 0.183902 123818 124351 1105-1105 0.500000 58.5 ndhG_p2 ndhG 2 AATCAAATTGCTTTGGGGCG AAGAACGGGCCCCTATTAGT 20 20 45.0 50.0 57.9 58.1 0.0 18.7 0.208506 123818 124351 1098-1098 0.500000 58.3 ndhG_p3 ndhG 3 CCAAACTATGGGGTGGTGAG TAAAGAAAAGAACGGGCCCC 20 20 55.0 50.0 57.9 58.1 0.0 18.7 0.214993 123818 124351 909-909 0.500000 58.3 ndhG_p4 ndhG 4 AATCAAATTGCTTTGGGGCG GATCCGCTCATGAAAGAGGG 20 20 45.0 55.0 57.9 58.1 0.0 0.0 0.221358 123818 124351 1742-1742 0.500000 58.2 ndhG_p5 ndhG 5 AATCAAATTGCTTTGGGGCG GGATCCGCTCATGAAAGAGG 20 20 45.0 55.0 57.9 58.1 0.0 0.0 0.221358 123818 124351 1743-1743 0.500000 58.2 ndhG-ndhE_p1 ndhG-ndhE 1 TGGACTGTTGGAGATGGAGT TCTTGGGGCAGAAGCAATTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.044037 124352 124608 1210-1210 0.500000 59.6 ndhG-ndhE_p2 ndhG-ndhE 2 TGGACTGTTGGAGATGGAGT TTCTTGGGGCAGAAGCAATT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.044037 124352 124608 1211-1211 0.500000 59.6 ndhG-ndhE_p3 ndhG-ndhE 3 TGGACTGTTGGAGATGGAGT CTTAGCTTTACACCCGTCCC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.049975 124352 124608 1189-1189 0.500000 59.6 ndhG-ndhE_p4 ndhG-ndhE 4 TTCCGTCTTTGGACTGTTGG TCTTGGGGCAGAAGCAATTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.052216 124352 124608 1219-1219 0.500000 59.6 ndhG-ndhE_p5 ndhG-ndhE 5 TTCCGTCTTTGGACTGTTGG TTCTTGGGGCAGAAGCAATT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.052216 124352 124608 1220-1220 0.500000 59.6 ndhE_p1 ndhE 1 TGGACTGTTGGAGATGGAGT TGCTACGAGTTGTCTCATGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.033736 124609 124914 1307-1307 0.500000 59.7 ndhE_p2 ndhE 2 TTCCGTCTTTGGACTGTTGG TGCTACGAGTTGTCTCATGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.041915 124609 124914 1316-1316 0.500000 59.7 ndhE_p3 ndhE 3 TGGACTGTTGGAGATGGAGT TCTTGGGGCAGAAGCAATTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.044037 124609 124914 1210-1210 0.500000 59.6 ndhE_p4 ndhE 4 TGGACTGTTGGAGATGGAGT TTCTTGGGGCAGAAGCAATT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.044037 124609 124914 1211-1211 0.500000 59.6 ndhE_p5 ndhE 5 TGGACTGTTGGAGATGGAGT CTTAGCTTTACACCCGTCCC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.049975 124609 124914 1189-1189 0.500000 59.6 ndhE-psaC_p1 ndhE-psaC 1 TTGCTATGGCTCGTCAATCC TGCTACGAGTTGTCTCATGC 20 20 50.0 50.0 58.0 58.0 1.7 0.0 0.050149 124915 125171 1072-1072 0.500000 59.6 ndhE-psaC_p2 ndhE-psaC 2 TTGCTATGGCTCGTCAATCC TCTTGGGGCAGAAGCAATTT 20 20 50.0 45.0 58.0 58.0 1.7 0.0 0.060451 124915 125171 975-975 0.500000 59.5 ndhE-psaC_p3 ndhE-psaC 3 TTGCTATGGCTCGTCAATCC TTCTTGGGGCAGAAGCAATT 20 20 50.0 45.0 58.0 58.0 1.7 0.0 0.060451 124915 125171 976-976 0.500000 59.5 ndhE-psaC_p4 ndhE-psaC 4 TTGCTATGGCTCGTCAATCC CTTAGCTTTACACCCGTCCC 20 20 50.0 55.0 58.0 58.0 1.7 0.0 0.066389 124915 125171 954-954 0.500000 59.5 ndhE-psaC_p5 ndhE-psaC 5 GGGGCCCGTTCTTTTCTTTA TGCTACGAGTTGTCTCATGC 20 20 50.0 50.0 58.1 58.0 17.8 0.0 0.089930 124915 125171 1006-1006 0.500000 59.3 ndhD_p1 ndhD 1 GCATGAGACAACTCGTAGCA CTGCAATTGTGGCTTCCATG 20 20 50.0 50.0 58.0 58.0 0.0 7.4 0.008291 125544 127046 2032-2032 0.500000 59.9 ndhD_p2 ndhD 2 GCATGAGACAACTCGTAGCA TCCTTTGGCGAAATCCAACA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.015415 125544 127046 2336-2336 0.500000 59.9 ndhD_p3 ndhD 3 AAATTGCTTCTGCCCCAAGA CTGCAATTGTGGCTTCCATG 20 20 45.0 50.0 58.0 58.0 0.0 7.4 0.018592 125544 127046 2129-2129 0.500000 59.9 ndhD_p4 ndhD 4 AATTGCTTCTGCCCCAAGAA CTGCAATTGTGGCTTCCATG 20 20 45.0 50.0 58.0 58.0 0.0 7.4 0.018592 125544 127046 2128-2128 0.500000 59.9 ndhD_p5 ndhD 5 GGGACGGGTGTAAAGCTAAG CTGCAATTGTGGCTTCCATG 20 20 55.0 50.0 58.0 58.0 0.0 7.4 0.024530 125544 127046 2150-2150 0.500000 59.8 ndhD-ccsA_p1 ndhD-ccsA 1 TCAACGGGGCCATTTTACAA CTGCAATTGTGGCTTCCATG 20 20 45.0 50.0 58.0 58.0 4.4 7.4 0.007784 127047 127299 887-887 0.500000 59.9 ndhD-ccsA_p2 ndhD-ccsA 2 TCAACGGGGCCATTTTACAA TCCTTTGGCGAAATCCAACA 20 20 45.0 45.0 58.0 58.0 4.4 0.0 0.014908 127047 127299 1191-1191 0.500000 59.9 ndhD-ccsA_p3 ndhD-ccsA 3 TCAACGGGGCCATTTTACAA ATGCAGCTCTTTTGTGTGGA 20 20 45.0 45.0 58.0 58.0 4.4 0.0 0.017728 127047 127299 1307-1307 0.500000 59.9 ndhD-ccsA_p4 ndhD-ccsA 4 TCAACGGGGCCATTTTACAA TGCAGCTCTTTTGTGTGGAT 20 20 45.0 45.0 58.0 58.0 4.4 0.0 0.017728 127047 127299 1306-1306 0.500000 59.9 ndhD-ccsA_p5 ndhD-ccsA 5 TTCTCGATGGCTTCTCTTGC CTGCAATTGTGGCTTCCATG 20 20 50.0 50.0 58.0 58.0 0.0 7.4 0.020318 127047 127299 729-729 0.500000 59.8 ccsA_p1 ccsA 1 TTCTCGATGGCTTCTCTTGC AATCGGTAGACACGCTGTTC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023566 127300 128271 1802-1802 0.500000 59.8 ccsA_p2 ccsA 2 TTCTCGATGGCTTCTCTTGC GAAATCGGTAGACACGCTGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023566 127300 128271 1804-1804 0.500000 59.8 ccsA_p3 ccsA 3 TTCTCGATGGCTTCTCTTGC GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023566 127300 128271 1806-1806 0.500000 59.8 ccsA_p4 ccsA 4 TTCTCGATGGCTTCTCTTGC TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024937 127300 128271 1805-1805 0.500000 59.8 ccsA_p5 ccsA 5 TTCTCGATGGCTTCTCTTGC CACCATCCCACACGACTAAG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.025881 127300 128271 1964-1964 0.500000 59.8 trnL-UAG-ndhF_p1 trnL-UAG-ndhF 1 ACAGCGTGTCTACCGATTTC AGGAACTGGAAGGGGAATGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.067587 128499 129658 1248-1248 0.500000 59.5 trnL-UAG-ndhF_p2 trnL-UAG-ndhF 2 AGCGTGTCTACCGATTTCAC AGGAACTGGAAGGGGAATGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.067587 128499 129658 1246-1246 0.500000 59.5 trnL-UAG-ndhF_p3 trnL-UAG-ndhF 3 GAACAGCGTGTCTACCGATT AGGAACTGGAAGGGGAATGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.067587 128499 129658 1250-1250 0.500000 59.5 trnL-UAG-ndhF_p4 trnL-UAG-ndhF 4 CAGCGTGTCTACCGATTTCA AGGAACTGGAAGGGGAATGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.068957 128499 129658 1247-1247 0.500000 59.4 trnL-UAG-ndhF_p5 trnL-UAG-ndhF 5 TCCACACAAAAGAGCTGCAT AGGAACTGGAAGGGGAATGA 20 20 45.0 50.0 58.0 57.9 1.0 0.0 0.074283 128499 129658 1903-1903 0.500000 59.4 ndhF_p1 ndhF 1 CGGGTTGAGTTTTTGGTGGA CCGAGTGGTACGAGGATTTG 20 20 50.0 55.0 58.6 58.1 0.0 0.0 0.682811 129659 131890 2984-2984 0.500000 54.5 ndhF_p2 ndhF 2 CGGGTTGAGTTTTTGGTGGA CGAGTGGTACGAGGATTTGG 20 20 50.0 55.0 58.6 58.1 0.0 0.0 0.682811 129659 131890 2983-2983 0.500000 54.5 ndhF_p3 ndhF 3 TCGGGTTGAGTTTTTGGTGG CCGAGTGGTACGAGGATTTG 20 20 50.0 55.0 58.6 58.1 0.0 0.0 0.682811 129659 131890 2985-2985 0.500000 54.5 ndhF_p4 ndhF 4 TCGGGTTGAGTTTTTGGTGG CGAGTGGTACGAGGATTTGG 20 20 50.0 55.0 58.6 58.1 0.0 0.0 0.682811 129659 131890 2984-2984 0.500000 54.5 ndhF_p5 ndhF 5 CGGGTTGAGTTTTTGGTGGA GAAACCGTGGCACAGATCTA 20 20 50.0 50.0 58.6 57.6 0.0 19.1 0.985465 129659 131890 2839-2839 0.500000 52.1