feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 1 1062 -1 1062 Genome 0.003838 21 354 77 106 no 0.257143 17 0.529412 0.003937 1.000000 45.700000 IGS_001 igs psbA|trnK-UUU psbA-trnK-UUU 1063 1207 0 145 Genome 0.011463 7 12 29 166 no 0.142857 11 0.454545 0.011131 1.000000 40.900000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1208 1242 -1 35 Genome 0.000000 0 0 14 131 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 matK gene matK matK 1398 3059 -1 1662 Genome 0.006021 60 0 23 26 no 0.657143 28 0.821429 0.006021 1.000000 45.900000 IGS_004 igs matK|trnK-UUU matK-trnK-UUU 3060 3539 0 480 Genome 0.002528 7 4 28 50 no 0.085714 8 0.375000 0.002529 1.000000 30.200000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 3540 3577 -1 38 Genome 0.000000 0 0 62 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_005 igs trnK-UUU|chlB trnK-UUU-chlB 3578 3670 0 93 Genome 0.017552 7 14 100 89 no 0.228571 15 0.533333 0.013877 0.946237 50.500000 chlB gene chlB chlB 3671 5215 -1 1545 Genome 0.005071 42 0 66 37 no 0.400000 24 0.583333 0.005071 1.000000 40.900000 IGS_006 igs chlB|trnT-GGU chlB-trnT-GGU 5216 5368 0 153 Genome 0.008712 10 6 141 0 no 0.114286 12 0.333333 0.008401 1.000000 37.800000 trnT-GGU tRNA trnT-GGU trnT-GGU 5369 5440 1 72 Genome 0.003688 2 0 28 59 no 0.028571 3 0.333333 0.003688 1.000000 26.500000 IGS_007 igs trnT-GGU|psbD trnT-GGU-psbD 5441 5634 0 194 Genome 0.007266 10 7 71 122 no 0.171429 12 0.500000 0.007244 0.994845 41.300000 psbD gene psbD psbD 5635 6696 1 1062 Genome 0.001972 11 0 16 78 no 0.085714 10 0.300000 0.001972 1.000000 30.000000 psbC gene psbC psbC 6644 8065 1 1422 Genome 0.002161 15 0 262 61 no 0.200000 12 0.583333 0.002161 1.000000 35.600000 IGS_009 igs psbC|trnS-UGA psbC-trnS-UGA 8066 8149 0 84 Genome 0.014854 10 26 120 124 no 0.114286 9 0.444444 0.014001 1.000000 54.800000 trnS-UGA tRNA trnS-UGA trnS-UGA 8150 8236 -1 87 Genome 0.000000 0 0 16 37 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_010 igs trnS-UGA|psbZ trnS-UGA-psbZ 8237 8369 0 133 Genome 0.013280 10 21 103 217 no 0.200000 16 0.437500 0.009322 0.984962 50.600000 psbZ gene psbZ psbZ 8370 8555 1 186 Genome 0.000904 2 0 7 31 no 0.028571 3 0.333333 0.000904 1.000000 21.600000 IGS_011 igs psbZ|trnG-UCC psbZ-trnG-UCC 8556 8703 0 148 Genome 0.012080 12 45 193 217 yes 0.285714 15 0.666667 0.011914 1.000000 59.700000 trnG-UCC tRNA trnG-UCC trnG-UCC 8704 8774 1 71 Genome 0.000000 0 0 34 146 no 0.000000 1 0.000000 0.000000 1.000000 21.300000 IGS_012 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 8775 8790 0 16 Genome 0.013655 2 0 105 130 no 0.028571 3 0.333333 NA 1.000000 45.800000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 8791 8864 -1 74 Genome 0.000000 0 0 121 56 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 IGS_013 igs trnfM-CAU|rps14 trnfM-CAU-rps14 8865 8947 0 83 Genome 0.021143 6 4 195 174 no 0.028571 6 0.166667 0.017922 1.000000 56.700000 rps14 gene rps14 rps14 8948 9241 -1 294 Genome 0.004596 7 0 1 21 no 0.057143 6 0.333333 0.004596 1.000000 24.900000 IGS_014 igs rps14|psaB rps14-psaB 9242 9349 0 108 Genome 0.009032 5 2 94 168 no 0.142857 9 0.555556 0.009072 0.990741 40.200000 psaB gene psaB psaB 9350 11554 -1 2205 Genome 0.002131 23 0 40 300 no 0.285714 18 0.555556 0.002131 1.000000 34.200000 IGS_015 igs psaB|psaA psaB-psaA 11555 11571 0 17 Genome 0.000000 0 0 248 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 11572 13824 -1 2253 Genome 0.002580 29 0 265 212 no 0.400000 20 0.700000 0.002580 1.000000 48.700000 IGS_016 igs psaA|ycf3 psaA-ycf3 13825 14188 0 364 Genome 0.003487 9 10 89 141 no 0.114286 10 0.400000 0.003475 1.000000 36.900000 ycf3 gene ycf3 ycf3 14189 15978 -1 1790 Genome 0.005450 60 59 115 227 yes 0.857143 32 0.937500 0.005143 0.998324 59.700000 IGS_017 igs ycf3|trnS-GGA ycf3-trnS-GGA 15979 16109 0 131 Genome 0.002592 5 8 26 96 no 0.171429 10 0.600000 0.002624 1.000000 35.900000 trnS-GGA tRNA trnS-GGA trnS-GGA 16110 16196 1 87 Genome 0.001275 1 0 157 9 no 0.000000 2 0.000000 0.001275 1.000000 21.400000 IGS_018 igs trnS-GGA|rps4 trnS-GGA-rps4 16197 16246 0 50 Genome 0.018555 4 0 244 9 no 0.000000 4 0.000000 0.018555 1.000000 37.800000 rps4 gene rps4 rps4 16247 16876 -1 630 Genome 0.004103 11 0 2 117 no 0.114286 10 0.400000 0.004103 1.000000 31.300000 IGS_019 igs rps4|psbM rps4-psbM 16877 17204 0 328 Genome 0.013913 16 27 26 8 yes 0.514286 25 0.720000 0.011627 0.993902 47.800000 psbM gene psbM psbM 17205 17309 1 105 Genome 0.008836 5 0 98 13 no 0.057143 5 0.400000 0.008836 1.000000 30.700000 IGS_020 igs psbM|petN psbM-petN 17310 17406 0 97 Genome 0.015178 12 0 38 110 no 0.057143 6 0.333333 0.015178 1.000000 42.000000 petN gene petN petN 17407 17496 -1 90 Genome 0.000000 0 0 40 20 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_021 igs petN|trnC-GCA petN-trnC-GCA 17497 17616 0 120 Genome 0.012316 8 21 130 122 no 0.257143 13 0.692308 0.012399 0.975000 51.900000 trnC-GCA tRNA trnC-GCA trnC-GCA 17617 17688 -1 72 Genome 0.000000 0 0 27 50 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_022 igs trnC-GCA|rpoB trnC-GCA-rpoB 17689 17870 0 182 Genome 0.012213 11 11 99 1 no 0.257143 16 0.562500 0.012235 1.000000 42.800000 rpoB gene rpoB rpoB 17871 21173 1 3303 Genome 0.003351 54 0 3 297 no 0.485714 25 0.680000 0.003351 1.000000 34.300000 rpoC1 gene rpoC1 rpoC1 21166 23833 1 2668 Genome 0.003109 55 20 300 178 no 0.600000 27 0.777778 0.003009 0.999625 52.000000 IGS_024 igs rpoC1|rpoC2 rpoC1-rpoC2 23834 23930 0 97 Genome 0.000589 1 0 169 81 no 0.028571 2 0.500000 0.000589 1.000000 26.900000 rpoC2 gene rpoC2 rpoC2 23931 27575 1 3645 Genome 0.002322 60 36 266 31 no 0.685714 28 0.857143 0.002322 1.000000 40.400000 IGS_025 igs rpoC2|rps2 rpoC2-rps2 27576 27707 0 132 Genome 0.045819 24 61 204 201 yes 0.314286 16 0.687500 0.026638 0.878788 73.200000 rps2 gene rps2 rps2 27708 28427 1 720 Genome 0.003627 11 0 79 38 yes 0.085714 8 0.375000 0.003627 1.000000 33.000000 IGS_026 igs rps2|atpI rps2-atpI 28428 28539 0 112 Genome 0.008703 8 1 117 111 no 0.114286 9 0.444444 0.008709 1.000000 43.200000 atpI gene atpI atpI 28540 29295 1 756 Genome 0.001236 6 0 73 133 no 0.028571 6 0.166667 0.001236 1.000000 32.600000 IGS_027 igs atpI|atpH atpI-atpH 29296 29417 0 122 Genome 0.001405 3 1 300 11 no 0.057143 4 0.500000 0.001407 1.000000 25.300000 atpH gene atpH atpH 29418 29663 1 246 Genome 0.001708 3 0 300 300 no 0.028571 4 0.250000 0.001708 1.000000 36.600000 IGS_028 igs atpH|atpF atpH-atpF 29664 29883 0 220 Genome 0.001047 4 10 234 300 no 0.142857 7 0.714286 0.001035 1.000000 44.800000 atpF gene atpF atpF 29884 31026 1 1143 Genome 0.003691 32 5 300 300 no 0.457143 21 0.761905 0.003703 0.997375 54.200000 IGS_029 igs atpF|atpA atpF-atpA 31027 31069 0 43 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpA gene atpA atpA 31070 32611 1 1542 Genome 0.001868 17 0 300 82 no 0.085714 12 0.250000 0.001868 1.000000 34.900000 trnR-UCU tRNA trnR-UCU trnR-UCU 32593 32664 -1 72 Genome 0.000000 0 0 172 29 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 IGS_031 igs trnR-UCU|trnS-GCU trnR-UCU-trnS-GCU 32665 33429 0 765 Genome 0.012663 40 66 244 91 yes 0.571429 27 0.740741 0.012735 0.981699 60.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 33430 33518 1 89 Genome 0.001284 2 0 137 2 no 0.057143 3 0.666667 0.001284 1.000000 23.400000 IGS_032 igs trnS-GCU|psbI trnS-GCU-psbI 33519 33543 0 25 Genome 0.016134 2 0 226 6 no 0.000000 3 0.000000 0.016134 1.000000 36.500000 psbI gene psbI psbI 33544 33660 -1 117 Genome 0.004798 2 0 22 42 no 0.028571 3 0.333333 0.004798 1.000000 25.200000 IGS_033 igs psbI|psbK psbI-psbK 33661 33719 0 59 Genome 0.009116 2 5 110 283 no 0.085714 7 0.428571 0.004806 0.932203 40.200000 psbK gene psbK psbK 33720 33893 -1 174 Genome 0.000637 1 9 7 109 no 0.000000 3 0.000000 0.000641 1.000000 26.400000 IGS_034 igs psbK|trnQ-UUG psbK-trnQ-UUG 33894 34103 0 210 Genome 0.010927 9 12 181 4 no 0.257143 18 0.500000 0.010554 1.000000 40.100000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 34104 34176 1 73 Genome 0.004006 1 0 2 197 no 0.000000 2 0.000000 0.004006 1.000000 22.400000 IGS_035 igs trnQ-UUG|trnE-UUC trnQ-UUG-trnE-UUC 34177 34289 0 113 Genome 0.001011 2 4 68 84 no 0.028571 3 0.333333 0.001015 1.000000 31.400000 trnE-UUC tRNA trnE-UUC trnE-UUC 34290 34362 1 73 Genome 0.000000 0 0 181 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_036 igs trnE-UUC|trnY-GUA trnE-UUC-trnY-GUA 34363 34400 0 38 Genome 0.010615 2 0 254 131 no 0.000000 3 0.000000 0.010615 1.000000 39.900000 trnY-GUA tRNA trnY-GUA trnY-GUA 34401 34484 1 84 Genome 0.000000 0 0 26 47 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_037 igs trnY-GUA|trnD-UGC trnY-GUA-trnD-UGC 34485 34589 0 105 Genome 0.007875 5 7 110 139 no 0.114286 9 0.444444 0.007922 1.000000 44.800000 trnD-UGC tRNA trnD-UGC trnD-UGC 34590 34663 1 74 Genome 0.000000 0 0 31 65 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_038 igs trnD-UGC|trnT-UGU trnD-UGC-trnT-UGU 34664 34791 0 128 Genome 0.011161 8 9 105 55 no 0.114286 10 0.400000 0.011190 1.000000 44.000000 trnT-UGU tRNA trnT-UGU trnT-UGU 34792 34864 1 73 Genome 0.007690 2 0 47 203 no 0.028571 3 0.333333 0.007690 1.000000 29.700000 IGS_039 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 34865 35016 0 152 Genome 0.002571 3 48 17 51 no 0.028571 5 0.200000 0.002476 1.000000 30.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 35017 35051 1 35 Genome 0.000000 0 0 169 16 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 35341 35390 1 50 Genome 0.009479 2 0 91 57 no 0.000000 3 0.000000 0.009479 1.000000 32.300000 IGS_042 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 35391 35516 0 126 Genome 0.006162 6 0 14 213 no 0.114286 7 0.571429 0.006162 1.000000 30.700000 trnF-GAA tRNA trnF-GAA trnF-GAA 35517 35589 1 73 Genome 0.000000 0 0 68 140 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 IGS_043 igs trnF-GAA|trnfM-CAU trnF-GAA-trnfM-CAU 35590 35941 0 352 Genome 0.010504 24 4 141 111 yes 0.371429 19 0.684211 0.010514 1.000000 49.800000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 35942 36014 1 73 Genome 0.001520 1 1 54 38 no 0.000000 3 0.000000 0.001529 1.000000 25.500000 IGS_044 igs trnfM-CAU|atpE trnfM-CAU-atpE 36015 36078 0 64 Genome 0.056851 16 27 127 129 yes 0.514286 22 0.818182 0.037351 0.953125 73.800000 atpE gene atpE atpE 36079 36486 -1 408 Genome 0.004020 9 0 9 5 no 0.085714 9 0.333333 0.004020 1.000000 27.500000 IGS_045 igs atpE|atpB atpE-atpB 36487 36539 0 53 Genome 0.014460 2 0 98 222 no 0.000000 3 0.000000 0.014460 1.000000 37.300000 atpB gene atpB atpB 36540 38009 -1 1470 Genome 0.002615 26 0 14 23 no 0.285714 17 0.588235 0.002615 1.000000 34.800000 IGS_046 igs atpB|rbcL atpB-rbcL 38010 38356 0 347 Genome 0.004979 11 10 39 96 no 0.114286 12 0.333333 0.004991 1.000000 34.600000 rbcL gene rbcL rbcL 38357 39784 1 1428 Genome 0.004126 25 0 77 6 no 0.342857 21 0.571429 0.004126 1.000000 35.900000 IGS_047 igs rbcL|trnR-CCG rbcL-trnR-CCG 39785 39878 0 94 Genome 0.013267 5 0 14 117 no 0.028571 5 0.200000 0.013267 1.000000 33.000000 trnR-CCG tRNA trnR-CCG trnR-CCG 39879 39952 1 74 Genome 0.000772 1 0 58 43 no 0.028571 2 0.500000 0.000772 1.000000 24.500000 IGS_048 igs trnR-CCG|psaI trnR-CCG-psaI 39953 40073 0 121 Genome 0.003195 2 0 132 42 no 0.028571 3 0.333333 0.003195 1.000000 25.900000 psaI gene psaI psaI 40074 40184 1 111 Genome 0.005330 2 0 77 26 no 0.000000 3 0.000000 0.005330 1.000000 25.400000 IGS_049 igs psaI|ycf4 psaI-ycf4 40185 40307 0 123 Genome 0.004974 3 0 68 108 no 0.000000 3 0.000000 0.004974 1.000000 29.100000 ycf4 gene ycf4 ycf4 40308 40865 1 558 Genome 0.003030 5 0 51 16 no 0.085714 7 0.428571 0.003030 1.000000 29.400000 IGS_050 igs ycf4|cemA ycf4-cemA 40866 40931 0 66 Genome 0.010186 3 0 22 8 no 0.028571 4 0.250000 0.010186 1.000000 30.200000 cemA gene cemA cemA 40932 41687 1 756 Genome 0.002397 11 0 49 126 no 0.142857 12 0.416667 0.002397 1.000000 34.300000 IGS_051 igs cemA|petA cemA-petA 41688 41826 0 139 Genome 0.004401 3 0 173 41 no 0.028571 4 0.250000 0.004401 1.000000 27.000000 petA gene petA petA 41827 42792 1 966 Genome 0.002140 11 0 12 14 no 0.085714 9 0.333333 0.002140 1.000000 29.900000 IGS_052 igs petA|psbJ petA-psbJ 42793 42912 0 120 Genome 0.006419 7 10 90 12 no 0.200000 12 0.583333 0.004712 1.000000 39.500000 psbJ gene psbJ psbJ 42913 43035 -1 123 Genome 0.007379 3 0 105 59 no 0.000000 4 0.000000 0.007379 1.000000 29.500000 IGS_053 igs psbJ|psbL psbJ-psbL 43036 43160 0 125 Genome 0.019844 11 13 44 277 yes 0.542857 27 0.703704 0.018961 1.000000 57.900000 psbL gene psbL psbL 43161 43277 -1 117 Genome 0.000000 0 0 11 160 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_054 igs psbL|psbF psbL-psbF 43278 43288 0 11 Genome 0.000000 0 0 128 149 no 0.000000 1 0.000000 NA 1.000000 28.300000 psbF gene psbF psbF 43289 43408 -1 120 Genome 0.000000 0 0 139 29 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 IGS_055 igs psbF|psbE psbF-psbE 43409 43417 0 9 Genome 0.000000 0 0 259 20 no 0.000000 1 0.000000 NA 1.000000 20.200000 psbE gene psbE psbE 43418 43669 -1 252 Genome 0.002388 3 0 268 12 no 0.028571 4 0.250000 0.002388 1.000000 22.700000 IGS_056 igs psbE|petL psbE-petL 43670 44009 0 340 Genome 0.008621 18 0 182 106 no 0.142857 15 0.333333 0.008621 1.000000 40.700000 petL gene petL petL 44010 44105 1 96 Genome 0.001190 2 0 58 10 no 0.057143 3 0.666667 0.001190 1.000000 23.700000 IGS_057 igs petL|petG petL-petG 44106 44222 0 117 Genome 0.015628 8 21 154 257 no 0.200000 14 0.500000 0.013110 1.000000 54.500000 petG gene petG petG 44223 44336 1 114 Genome 0.002978 5 0 94 143 no 0.057143 4 0.500000 0.002978 1.000000 33.700000 IGS_058 igs petG|trnW-CCA petG-trnW-CCA 44337 44359 0 23 Genome 0.002484 1 0 208 120 no 0.028571 2 0.500000 0.002484 1.000000 34.800000 trnW-CCA tRNA trnW-CCA trnW-CCA 44360 44433 -1 74 Genome 0.003861 5 0 231 46 no 0.028571 2 0.500000 0.003861 1.000000 32.900000 IGS_059 igs trnW-CCA|trnP trnW-CCA-trnP 44434 44505 0 72 Genome 0.010784 3 0 300 214 no 0.000000 4 0.000000 0.010784 1.000000 43.800000 trnP tRNA trnP trnP 44506 44580 -1 75 Genome 0.000762 1 0 25 139 no 0.028571 2 0.500000 0.000762 1.000000 23.200000 IGS_060 igs trnP|psaJ trnP-psaJ 44581 44777 0 197 Genome 0.003873 9 9 100 148 no 0.114286 11 0.363636 0.003925 0.994924 41.200000 psaJ gene psaJ psaJ 44778 44909 1 132 Genome 0.001273 2 0 57 16 no 0.028571 3 0.333333 0.001273 1.000000 23.000000 IGS_061 igs psaJ|rpl33 psaJ-rpl33 44910 45033 0 124 Genome 0.024657 12 18 189 288 yes 0.342857 20 0.600000 0.011954 0.927419 65.700000 rpl33 gene rpl33 rpl33 45034 45204 1 171 Genome 0.000983 2 0 23 117 no 0.028571 3 0.333333 0.000983 1.000000 22.900000 IGS_062 igs rpl33|rps18 rpl33-rps18 45205 45274 0 70 Genome 0.000000 0 0 194 47 no 0.000000 1 0.000000 0.000000 1.000000 22.300000 rps18 gene rps18 rps18 45275 45568 1 294 Genome 0.006231 7 0 264 83 no 0.057143 8 0.250000 0.006231 1.000000 31.800000 IGS_063 igs rps18|rpl20 rps18-rpl20 45569 45656 0 88 Genome 0.006990 3 15 42 24 no 0.028571 7 0.142857 0.007652 0.931818 31.700000 rpl20 gene rpl20 rpl20 45657 46004 -1 348 Genome 0.003854 8 0 3 5 no 0.085714 8 0.375000 0.003854 1.000000 26.200000 IGS_064 igs rpl20|rps12 rpl20-rps12 46005 46600 0 596 Genome 0.004339 17 14 140 300 no 0.485714 25 0.680000 0.003520 1.000000 52.900000 rps12_part1 gene rps12 rps12 46601 46714 -1 114 Genome 0.000000 0 0 285 208 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_065 igs rps12|clpP rps12-clpP 46715 46820 0 106 Genome 0.005327 8 4 300 102 no 0.142857 11 0.454545 0.005460 0.981132 44.700000 clpP gene clpP clpP 46821 47519 -1 699 Genome 0.003583 13 3 300 139 no 0.200000 13 0.538462 0.003598 0.995708 43.500000 IGS_066 igs clpP|psbB clpP-psbB 47520 48695 0 1176 Genome 0.007397 68 46 17 92 yes 0.942857 34 0.970588 0.007313 0.991497 59.000000 psbB gene psbB psbB 48696 50222 1 1527 Genome 0.002263 22 0 178 132 no 0.257143 15 0.600000 0.002263 1.000000 42.500000 IGS_067 igs psbB|psbT psbB-psbT 50223 50289 0 67 Genome 0.000905 1 6 18 65 no 0.085714 8 0.375000 0.000829 0.970149 28.900000 psbT gene psbT psbT 50290 50403 1 114 Genome 0.004600 2 0 85 27 no 0.000000 3 0.000000 0.004600 1.000000 25.000000 IGS_068 igs psbT|psbN psbT-psbN 50404 50451 0 48 Genome 0.016387 2 4 48 159 no 0.028571 3 0.333333 0.016552 1.000000 41.600000 psbN gene psbN psbN 50452 50583 -1 132 Genome 0.000433 1 0 19 27 no 0.028571 2 0.500000 0.000433 1.000000 21.900000 IGS_069 igs psbN|psbH psbN-psbH 50584 50680 0 97 Genome 0.006030 2 0 151 277 no 0.000000 2 0.000000 0.006030 1.000000 35.400000 psbH gene psbH psbH 50681 50908 1 228 Genome 0.000000 0 0 2 49 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_070 igs psbH|petB psbH-petB 50909 51028 0 120 Genome 0.010945 4 32 230 292 no 0.085714 8 0.375000 0.009935 1.000000 50.000000 petB gene petB petB 51029 52192 1 1164 Genome 0.001432 15 0 14 3 no 0.200000 13 0.538462 0.001432 1.000000 31.200000 IGS_071 igs petB|petD petB-petD 52193 52329 0 137 Genome 0.009645 6 4 12 299 no 0.114286 9 0.444444 0.006292 0.992701 35.000000 petD gene petD petD 52330 53336 1 1007 Genome 0.003261 16 7 1 5 no 0.200000 16 0.437500 0.003271 1.000000 33.100000 IGS_072 igs petD|rpoA petD-rpoA 53337 53427 0 91 Genome 0.008385 2 2 178 13 no 0.057143 6 0.333333 0.008409 1.000000 30.000000 rpoA gene rpoA rpoA 53428 54219 -1 792 Genome 0.002933 15 1 26 300 no 0.200000 17 0.411765 0.002934 1.000000 34.500000 IGS_073 igs rpoA|rps11 rpoA-rps11 54220 54230 0 11 Genome 0.000000 0 0 128 300 no 0.000000 1 0.000000 NA 1.000000 28.300000 rps11 gene rps11 rps11 54231 54629 -1 399 Genome 0.002321 9 0 139 5 no 0.285714 12 0.833333 0.002321 1.000000 30.400000 IGS_074 igs rps11|rpl36 rps11-rpl36 54630 54712 0 83 Genome 0.035146 11 5 31 68 yes 0.171429 12 0.500000 0.032448 1.000000 58.700000 rpl36 gene rpl36 rpl36 54713 54826 -1 114 Genome 0.003627 2 0 7 7 no 0.000000 3 0.000000 0.003627 1.000000 23.100000 IGS_075 igs rpl36|infA rpl36-infA 54827 54942 0 116 Genome 0.013619 6 1 45 216 no 0.057143 8 0.250000 0.013699 1.000000 36.800000 infA gene infA infA 54943 55176 -1 234 Genome 0.001566 3 0 2 0 no 0.057143 4 0.500000 0.001566 1.000000 22.100000 IGS_076 igs infA|rps8 infA-rps8 55177 55223 0 47 Genome 0.017808 3 0 17 150 no 0.000000 3 0.000000 0.017808 1.000000 36.000000 rps8 gene rps8 rps8 55224 55610 -1 387 Genome 0.003865 13 0 2 41 no 0.200000 12 0.583333 0.003865 1.000000 30.400000 IGS_077 igs rps8|rpl14 rps8-rpl14 55611 55730 0 120 Genome 0.011851 9 10 62 6 no 0.314286 17 0.647059 0.011097 1.000000 45.600000 rpl14 gene rpl14 rpl14 55731 56099 -1 369 Genome 0.001139 3 0 77 49 no 0.028571 4 0.250000 0.001139 1.000000 25.900000 IGS_078 igs rpl14|rpl16 rpl14-rpl16 56100 56174 0 75 Genome 0.022678 9 0 300 252 no 0.028571 4 0.250000 0.022678 1.000000 57.000000 rpl16 gene rpl16 rpl16 56175 57183 -1 1009 Genome 0.003245 23 16 5 13 no 0.342857 19 0.631579 0.003258 0.997027 38.000000 IGS_079 igs rpl16|rps3 rpl16-rps3 57184 57288 0 105 Genome 0.013154 7 13 114 67 no 0.114286 10 0.400000 0.013529 1.000000 45.600000 rps3 gene rps3 rps3 57289 57936 -1 648 Genome 0.002661 11 0 36 32 no 0.114286 10 0.400000 0.002661 1.000000 32.900000 rpl22 gene rpl22 rpl22 57926 58348 -1 423 Genome 0.004569 13 0 63 196 no 0.200000 13 0.538462 0.004569 1.000000 35.700000 IGS_081 igs rpl22|rps19 rpl22-rps19 58349 58365 0 17 Genome 0.000000 0 0 29 179 no 0.000000 1 0.000000 NA 1.000000 20.900000 rps19 gene rps19 rps19 58366 58710 -1 345 Genome 0.005232 7 0 46 300 no 0.057143 7 0.285714 0.005232 1.000000 29.100000 IGS_082 igs rps19|rpl2 rps19-rpl2 58711 58725 0 15 Genome 0.014566 2 0 59 300 no 0.028571 3 0.333333 NA 1.000000 42.800000 rpl2 gene rpl2 rpl2 58726 60001 -1 1276 Genome 0.005984 48 31 74 16 yes 0.657143 28 0.821429 0.005776 0.996865 48.800000 IGS_083 igs rpl2|trnI-CAU rpl2-trnI-CAU 60002 60619 0 618 Genome 0.006355 15 72 24 84 no 0.142857 12 0.416667 0.002636 0.901294 38.200000 trnI-CAU tRNA trnI-CAU trnI-CAU 60620 60693 -1 74 Genome 0.000000 0 0 300 10 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_084 igs trnI-CAU|trnH-GUG trnI-CAU-trnH-GUG 60694 60941 0 248 Genome 0.003578 4 12 300 155 no 0.028571 6 0.166667 0.003628 1.000000 40.200000 trnH-GUG tRNA trnH-GUG trnH-GUG 60942 61015 1 74 Genome 0.000000 0 0 80 81 no 0.000000 1 0.000000 0.000000 1.000000 24.800000 IGS_085 igs trnH-GUG|ycf2 trnH-GUG-ycf2 61016 61265 0 250 Genome 0.001627 3 5 154 300 no 0.057143 5 0.400000 0.001632 1.000000 36.000000 ycf2 gene ycf2 ycf2 61266 67640 1 6375 Genome 0.000484 22 14 168 28 no 0.285714 18 0.555556 0.000484 1.000000 27.100000 IGS_086 igs ycf2|trnL-CAA ycf2-trnL-CAA 67641 67914 0 274 Genome 0.002556 5 6 300 228 no 0.057143 5 0.400000 0.002523 1.000000 41.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 67915 67994 -1 80 Genome 0.000000 0 0 245 148 no 0.000000 1 0.000000 0.000000 1.000000 29.800000 IGS_087 igs trnL-CAA|rps7 trnL-CAA-rps7 67995 68145 0 151 Genome 0.001795 2 13 300 300 no 0.085714 5 0.600000 0.001716 1.000000 44.000000 rps7 gene rps7 rps7 68146 68616 -1 471 Genome 0.000000 0 0 2 300 no 0.000000 1 0.000000 0.000000 1.000000 22.500000 IGS_088 igs rps7|rps12 rps7-rps12 68617 68665 0 49 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps12_part2 gene rps12 rps12 68666 69402 -1 737 Genome 0.000862 3 4 300 300 no 0.028571 5 0.200000 0.000862 1.000000 42.100000 IGS_089 igs rps12|trnV-GAC rps12-trnV-GAC 69403 70141 0 739 Genome 0.002971 6 32 300 300 no 0.114286 9 0.444444 0.001360 0.993234 49.600000 trnV-GAC tRNA trnV-GAC trnV-GAC 70142 70213 1 72 Genome 0.000000 0 0 212 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_090 igs trnV-GAC|rrn16 trnV-GAC-rrn16 70214 70379 0 166 Genome 0.000000 0 13 284 300 no 0.028571 3 0.333333 0.000000 1.000000 40.400000 rrn16 rRNA rrn16 rrn16 70380 71861 1 1482 Genome 0.000490 2 0 300 146 no 0.000000 2 0.000000 0.000490 1.000000 36.300000 IGS_091 igs rrn16|trnI-GAU rrn16-trnI-GAU 71862 72094 0 233 Genome 0.002972 3 5 61 197 no 0.000000 5 0.000000 0.002979 1.000000 28.900000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 72095 72131 1 37 Genome 0.000000 0 0 86 160 no 0.000000 1 0.000000 0.000000 1.000000 25.200000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 72870 72905 1 36 Genome 0.000000 0 1 59 300 no 0.028571 2 0.500000 0.000000 0.972222 26.000000 IGS_094 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 72906 72953 0 48 Genome 0.000000 0 0 95 300 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 72954 72993 1 40 Genome 0.000000 0 0 143 300 no 0.000000 1 0.000000 0.000000 1.000000 29.500000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 73744 73779 1 36 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_097 igs trnA-UGC|rrn23 trnA-UGC-rrn23 73780 73893 0 114 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 73894 76735 1 2842 Genome 0.000188 5 0 300 48 no 0.085714 6 0.500000 0.000188 1.000000 27.700000 IGS_098 igs rrn23|rrn4.5 rrn23-rrn4.5 76736 76796 0 61 Genome 0.004133 1 0 300 277 no 0.000000 2 0.000000 0.004133 1.000000 37.700000 rrn4.5 rRNA rrn4.5 rrn4.5 76797 76899 1 103 Genome 0.000000 0 0 12 174 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_099 igs rrn4.5|rrn5 rrn4.5-rrn5 76900 77151 0 252 Genome 0.003001 2 0 115 248 no 0.000000 3 0.000000 0.003001 1.000000 29.700000 rrn5 rRNA rrn5 rrn5 77152 77295 1 144 Genome 0.000000 0 0 23 104 no 0.000000 1 0.000000 0.000000 1.000000 20.500000 IGS_100 igs rrn5|trnR-ACG rrn5-trnR-ACG 77296 77461 0 166 Genome 0.003078 3 8 167 136 no 0.057143 5 0.400000 0.003110 1.000000 39.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 77462 77535 1 74 Genome 0.000000 0 0 61 62 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 IGS_101 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 77536 77754 0 219 Genome 0.000952 1 12 135 300 no 0.000000 5 0.000000 0.000955 1.000000 36.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 77755 77828 1 74 Genome 0.000000 0 0 156 300 no 0.000000 1 0.000000 0.000000 1.000000 30.400000 IGS_102 igs trnN-GUU|chlL trnN-GUU-chlL 77829 78135 0 307 Genome 0.001281 5 0 230 269 no 0.114286 6 0.666667 0.001281 1.000000 38.700000 chlL gene chlL chlL 78136 79005 1 870 Genome 0.000784 5 0 300 230 no 0.028571 6 0.166667 0.000784 1.000000 41.600000 IGS_103 igs chlL|chlN chlL-chlN 79006 79023 0 18 Genome 0.000000 0 0 300 212 no 0.000000 1 0.000000 NA 1.000000 33.800000 chlN gene chlN chlN 79024 80430 1 1407 Genome 0.000755 5 0 300 300 no 0.057143 5 0.400000 0.000755 1.000000 41.900000 IGS_104 igs chlN|rps15 chlN-rps15 80431 80500 0 70 Genome 0.000000 0 0 29 287 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 rps15 gene rps15 rps15 80501 80731 1 231 Genome 0.000742 3 0 99 56 no 0.057143 3 0.666667 0.000742 1.000000 26.000000 IGS_105 igs rps15|psaC rps15-psaC 80732 81037 0 306 Genome 0.025691 43 61 300 44 yes 0.885714 33 0.939394 0.024435 1.000000 68.500000 psaC gene psaC psaC 81038 81283 1 246 Genome 0.003771 4 0 19 11 yes 0.000000 5 0.000000 0.003771 1.000000 23.300000 IGS_106 igs psaC|ccsA psaC-ccsA 81284 81389 0 106 Genome 0.041244 16 12 81 81 yes 0.257143 14 0.642857 0.042502 1.000000 66.100000 ccsA gene ccsA ccsA 81390 82313 -1 924 Genome 0.004645 30 18 2 0 no 0.400000 20 0.700000 0.004661 1.000000 41.000000 IGS_107 igs ccsA|trnL-AUG ccsA-trnL-AUG 82314 82374 0 61 Genome 0.005951 1 2 69 126 no 0.028571 4 0.250000 0.005971 1.000000 33.200000 trnL-AUG tRNA trnL-AUG trnL-AUG 82375 82454 -1 80 Genome 0.000714 1 0 60 46 no 0.028571 2 0.500000 0.000714 1.000000 24.600000 IGS_108 igs trnL-AUG|ycf1 trnL-AUG-ycf1 82455 82850 0 396 Genome 0.019223 31 54 140 1 yes 0.428571 22 0.681818 0.018852 0.987374 52.900000 ycf1 gene ycf1 ycf1 82851 88898 -1 6048 Genome 0.006669 254 21 4 300 no 0.885714 33 0.939394 0.006645 1.000000 44.300000