primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG GAGTGGGAGCTTAGTTTCCG 20 20 55.0 55.0 58.1 58.0 0.0 0.0 0.140460 85 412 880-1029 0.968750 89.6 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA GAGTGGGAGCTTAGTTTCCG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.144821 85 412 894-1043 0.968750 89.6 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC GAGTGGGAGCTTAGTTTCCG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.146329 85 412 893-1042 0.968750 89.6 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC GAGTGGGAGCTTAGTTTCCG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.146329 85 412 895-1044 0.968750 89.6 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG AAGCTCCAACAAACGGCTAA 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.153260 85 412 228-377 0.750000 80.8 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAGGTAGAAGATTCGGGGGT GCCGTACGAGGAGAAAACTT 20 20 50.0 50.0 57.7 57.9 0.0 18.8 0.341505 4286 4800 1506-1549 0.968750 87.8 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AGGTAGAAGATTCGGGGGTT GCCGTACGAGGAGAAAACTT 20 20 50.0 50.0 57.7 57.9 0.0 18.8 0.341505 4286 4800 1505-1548 0.968750 87.8 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCTAGCCGCACTTAAAAGCC GCCGTACGAGGAGAAAACTT 20 20 50.0 50.0 58.3 57.9 0.0 18.8 0.341816 4286 4800 854-875 0.968750 86.4 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGGTAGAAGATTCGGGGGT TCTATCCCAATGAGCCGTCT 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.353631 4286 4800 1450-1493 0.781250 79.6 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AGGTAGAAGATTCGGGGGTT TCTATCCCAATGAGCCGTCT 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.353631 4286 4800 1449-1492 0.781250 79.6 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5948 6763 769-1075 1.000000 90.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GTCTCGCTATTCGGAGGTTC 20 20 45.0 55.0 58.1 57.9 8.1 0.0 0.261887 5948 6763 782-1088 1.000000 89.9 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA CGGGTTTTGGTCTCGCTATT 20 20 45.0 50.0 58.1 58.3 8.1 0.0 0.405161 5948 6763 791-1004 0.906250 85.0 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAAAATCCACAACGGGTCGT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.3 58.1 0.0 16.9 0.393361 5948 6763 796-1009 0.875000 83.9 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAAAATCCACAACGGGTCGT GTCTCGCTATTCGGAGGTTC 20 20 45.0 55.0 58.3 57.9 0.0 0.0 0.439823 5948 6763 809-1022 0.875000 83.5 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA CATCGTTAGCTTGGAAGGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.034421 8127 8797 1298-1482 1.000000 91.7 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC CATCGTTAGCTTGGAAGGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.035809 8127 8797 1297-1481 1.000000 91.7 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA TAGTCGACGCCAATTCAGTG 20 20 50.0 50.0 58.0 58.0 0.0 10.5 0.013783 8127 8797 1270-1430 0.687500 79.4 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 AATCCGACGCTTTAGTCCAC TAGTCGACGCCAATTCAGTG 20 20 50.0 50.0 58.0 58.0 0.0 10.5 0.015171 8127 8797 1269-1429 0.687500 79.4 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 CCTCGCCTTTGAGCCTTTAT TAGTCGACGCCAATTCAGTG 20 20 50.0 50.0 58.0 58.0 0.0 10.5 0.053324 8127 8797 1812-1972 0.687500 78.3 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CGAGCCCATATCCTTGCTTT ACTTCTTCCCCACACTACGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.032498 26303 27446 1833-2010 0.750000 81.4 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CGAGCCCATATCCTTGCTTT TTCTTCCCCACACTACGAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.032498 26303 27446 1831-2008 0.750000 81.4 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TTGTTTCCTACTCACGCGAG TTCTTCCCCACACTACGAGT 20 20 50.0 50.0 57.9 58.0 15.9 0.0 0.065696 26303 27446 1847-2024 0.750000 81.1 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CCGCCTACACAAGCAAATTG ACTTCTTCCCCACACTACGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024117 26303 27446 2025-2202 0.750000 80.9 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 CCGCCTACACAAGCAAATTG TTCTTCCCCACACTACGAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024117 26303 27446 2023-2200 0.750000 80.9 petN-psbM_p1 petN-psbM 1 ACTCGTAGTGTGGGGAAGAA CCCTTATTTCCCCGGGATTG 20 20 50.0 55.0 58.0 58.0 0.0 26.3 0.009994 27770 28769 1250-1806 1.000000 91.9 petN-psbM_p2 petN-psbM 2 TCGTAGTGTGGGGAAGAAGT CCCTTATTTCCCCGGGATTG 20 20 50.0 55.0 58.0 58.0 0.0 26.3 0.009994 27770 28769 1248-1804 1.000000 91.9 petN-psbM_p3 petN-psbM 3 ACTCGTAGTGTGGGGAAGAA TCATTCTAGTACCGACCGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.053814 27770 28769 593-1154 1.000000 91.6 petN-psbM_p4 petN-psbM 4 TCGTAGTGTGGGGAAGAAGT TCATTCTAGTACCGACCGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.053814 27770 28769 591-1152 1.000000 91.6 petN-psbM_p5 petN-psbM 5 TCCGGGAAAAATTGCATCCA CCCTTATTTCCCCGGGATTG 20 20 45.0 55.0 58.1 58.0 0.0 26.3 0.074373 27770 28769 1576-2132 0.906250 87.7 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG GGACCAGCCTACAAAAACGA 20 20 55.0 50.0 58.1 58.1 7.6 0.0 0.177181 30285 31401 867-1443 1.000000 90.6 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199336 30285 31401 870-1446 1.000000 90.4 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 30285 31401 857-1433 1.000000 89.5 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 30285 31401 860-1436 1.000000 89.3 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GGCGTAAGTCATCGGTTCAA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.395920 30285 31401 844-1420 1.000000 88.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 45277 45948 702-786 1.000000 89.0 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 45277 45948 734-818 1.000000 88.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 45277 45948 696-780 1.000000 87.7 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 45277 45948 734-818 1.000000 86.9 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT CGTCTACCGATTTCGCCATA 20 20 50.0 50.0 57.8 57.6 15.5 0.0 0.651279 45277 45948 728-812 1.000000 86.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CGGGGCTAAAATCCCAGAAA GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 57.9 58.7 0.1 0.0 0.821159 49261 50195 959-1080 1.000000 85.4 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 CGGGGCTAAAATCCCAGAAA TTCGAGTCCGTATAGCCCTA 20 20 50.0 50.0 57.9 57.1 0.1 0.0 1.074729 49261 50195 958-1079 1.000000 83.4 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 CTCCGGCCCTTTTCTAATCG GTTCGAGTCCGTATAGCCCT 20 20 55.0 55.0 58.4 58.7 0.0 0.0 1.100296 49261 50195 977-1098 1.000000 83.2 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 AATCGGGGCTAAAATCCCAG GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 57.6 58.7 0.1 0.0 1.048321 49261 50195 962-1083 0.937500 81.1 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 AATCGGGGCTAAAATCCCAG TTCGAGTCCGTATAGCCCTA 20 20 50.0 50.0 57.6 57.1 0.1 0.0 1.301892 49261 50195 961-1082 0.937500 79.1 ycf4-cemA_p1 ycf4-cemA 1 TTAGCCTATTTCTTGCGCGT GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 58.0 58.1 8.4 0.0 0.095186 59458 60140 768-802 1.000000 91.2 ycf4-cemA_p2 ycf4-cemA 2 TGCGCGTACCAATTGAAGTA GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 57.9 58.1 8.4 0.0 0.158370 59458 60140 755-789 1.000000 90.7 ycf4-cemA_p3 ycf4-cemA 3 CTTGCGCGTACCAATTGAAG GAAATCCACCAGGGCAGAAA 20 20 50.0 50.0 58.1 58.1 8.4 0.0 0.194446 59458 60140 757-791 1.000000 90.4 ycf4-cemA_p4 ycf4-cemA 4 TTTCTTGCGCGTACCAATTG GAAATCCACCAGGGCAGAAA 20 20 45.0 50.0 57.7 58.1 8.4 0.0 0.400584 59458 60140 760-794 0.968750 87.1 ycf4-cemA_p5 ycf4-cemA 5 CCTATTTCTTGCGCGTACCA GAAATCCACCAGGGCAGAAA 20 20 50.0 50.0 58.4 58.1 8.4 0.0 0.429298 59458 60140 764-798 0.968750 86.8 trnW-CCA-trnP-UGG_p1 trnW-CCA-trnP-UGG 1 ACCGAACTGAACTAAGAGCG CTTGGTAGCGCGTTTGTTTT 20 20 50.0 45.0 57.7 57.9 0.0 8.4 0.463208 65291 65453 204-267 1.000000 88.3 trnW-CCA-trnP-UGG_p2 trnW-CCA-trnP-UGG 2 ACCGAACTGAACTAAGAGCG TTGGTAGCGCGTTTGTTTTG 20 20 50.0 45.0 57.7 58.2 0.0 8.4 0.520466 65291 65453 203-266 1.000000 87.8 trnW-CCA-trnP-UGG_p3 trnW-CCA-trnP-UGG 3 ACCGAACTGAACTAAGAGCG CGCGTTTGTTTTGGGTACAA 20 20 50.0 45.0 57.7 57.8 0.0 0.0 0.539622 65291 65453 196-259 1.000000 87.7 trnW-CCA-trnP-UGG_p4 trnW-CCA-trnP-UGG 4 ACCGAACTGAACTAAGAGCG TAGCGCGTTTGTTTTGGGTA 20 20 50.0 45.0 57.7 58.4 0.0 8.4 0.758365 65291 65453 199-262 1.000000 85.9 trnW-CCA-trnP-UGG_p5 trnW-CCA-trnP-UGG 5 CCGAACTGAACTAAGAGCGC CTTGGTAGCGCGTTTGTTTT 20 20 55.0 45.0 59.0 57.9 0.0 8.4 1.121109 65291 65453 203-266 1.000000 83.0 ndhF-rpl32_p1 ndhF-rpl32 1 CACCCATATTGATATGTCTGTTGC TGACCCAGAAGTACGTTTTT 24 20 41.7 40.0 58.0 54.8 9.5 0.0 7.173726 110488 110888 448-479 0.906250 48.3 ndhF-rpl32_p2 ndhF-rpl32 2 CACCCATATTGATATGTCTGTTGC TTGACCCAGAAGTACGTTTT 24 20 41.7 40.0 58.0 54.8 9.5 0.0 7.173726 110488 110888 449-480 0.906250 48.3 ndhF-rpl32_p3 ndhF-rpl32 3 CACCCATATTGATATGTCTGTTGC TTTGACCCAGAAGTACGTTT 24 20 41.7 40.0 58.0 54.8 9.5 0.0 7.173726 110488 110888 450-481 0.906250 48.3 ndhF-rpl32_p4 ndhF-rpl32 4 CACCCATATTGATATGTCTGTTGC TTTTGACCCAGAAGTACGTT 24 20 41.7 40.0 58.0 54.8 9.5 0.0 7.173726 110488 110888 451-482 0.906250 48.3 ndhF-rpl32_p5 ndhF-rpl32 5 CACCCATATTGATATGTCTGTTGC TTTTTGACCCAGAAGTACGT 24 20 41.7 40.0 58.0 54.8 9.5 0.0 7.173726 110488 110888 452-483 0.906250 48.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AAGGAAAGGCTATTCGGCAG GGTAGCAAAACCCTGGGAAA 20 20 50.0 50.0 58.0 58.0 0.0 22.2 0.048060 111063 111752 1261-1321 0.656250 77.9 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AAGGAAAGGCTATTCGGCAG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.168400 111063 111752 791-842 0.656250 76.9 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AAGGAAAGGCTATTCGGCAG AAGACCCGAGGTAGCAAAAC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.224555 111063 111752 1270-1330 0.656250 76.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AAGGAAAGGCTATTCGGCAG ATGCCCCTTTCGGATGAATC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.057240 111063 111752 1053-1113 0.593750 75.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AAGGAAAGGCTATTCGGCAG GCCCCTTTCGGATGAATCAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.057240 111063 111752 1051-1111 0.593750 75.3 ndhG-ndhI_p1 ndhG-ndhI 1 CCCAACGGTCCAAAGATGAA ACAAACAATACGAGCTGCCA 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.204837 116334 116685 1081-1118 1.000000 90.4 ndhG-ndhI_p2 ndhG-ndhI 2 CCCAACGGTCCAAAGATGAA ATTAGAACGTTTCCGAGGCC 20 20 50.0 50.0 58.1 58.0 0.0 0.5 0.115661 116334 116685 973-1002 0.843750 84.6 ndhG-ndhI_p3 ndhG-ndhI 3 AGACCCGGTCCTAGAAAGAC ATTAGAACGTTTCCGAGGCC 20 20 55.0 50.0 58.2 58.0 14.3 0.5 0.169971 116334 116685 741-770 0.843750 84.4 ndhG-ndhI_p4 ndhG-ndhI 4 GACCCGGTCCTAGAAAGACT ATTAGAACGTTTCCGAGGCC 20 20 55.0 50.0 58.2 58.0 6.3 0.5 0.169971 116334 116685 740-769 0.843750 84.4 ndhG-ndhI_p5 ndhG-ndhI 5 ATGATCCCATACCAGGCTGT ATTAGAACGTTTCCGAGGCC 20 20 50.0 50.0 58.2 58.0 14.4 0.5 0.194843 116334 116685 1081-1085 0.187500 52.2 ycf1_p1 ycf1 1 TGCGCATTTGCTTGAAACAA CCTCCCGGTTTAGCCTTTTT 20 20 40.0 50.0 58.1 58.1 5.7 0.0 0.148854 124771 124890 965-965 0.250000 56.6 ycf1_p2 ycf1 2 GCAAGTGGAATGCTATCCCA CCTCCCGGTTTAGCCTTTTT 20 20 50.0 50.0 57.9 58.1 6.0 0.0 0.137897 124771 124890 1190-1190 0.250000 55.9 ycf1_p3 ycf1 3 GCAATTGGAGTATACGGCCA CCTCCCGGTTTAGCCTTTTT 20 20 50.0 50.0 58.0 58.1 14.2 0.0 0.118966 124771 124890 1297-1297 0.218750 52.4 ycf1_p4 ycf1 4 TGCAATTGGAGTATACGGCC CCTCCCGGTTTAGCCTTTTT 20 20 50.0 50.0 58.0 58.1 7.7 0.0 0.118966 124771 124890 1298-1298 0.218750 52.4 ycf1_p5 ycf1 5 GGACCAAAAGGAAGTTCCGT CCTCCCGGTTTAGCCTTTTT 20 20 50.0 50.0 58.0 58.1 16.3 0.0 0.103704 124771 124890 1571-1571 0.062500 45.2