primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA-rbcL_p1 psbA-rbcL 1 CGTCTCTCTAAAATTGCAGTCA ATTTGAGTTTGCCGCAATGG 22 20 40.9 45.0 56.5 57.9 0.0 6.6 3.601541 1477 2299 877-908 1.000000 60.4 psbA-rbcL_p2 psbA-rbcL 2 CGTCTCTCTAAAATTGCAGTCA TGAGTTTGCCGCAATGGATA 22 20 40.9 45.0 56.5 57.9 0.0 6.6 3.639665 1477 2299 874-905 1.000000 60.1 psbA-rbcL_p3 psbA-rbcL 3 CGTCTCTCTAAAATTGCAGTCA AGTTTGCCGCAATGGATACT 22 20 40.9 45.0 56.5 57.9 0.0 6.6 3.647145 1477 2299 872-903 1.000000 60.0 psbA-rbcL_p4 psbA-rbcL 4 CGTCTCTCTAAAATTGCAGTCA GAGTTTGCCGCAATGGATAC 22 20 40.9 50.0 56.5 57.5 0.0 6.6 3.993574 1477 2299 873-904 1.000000 57.2 psbA-rbcL_p5 psbA-rbcL 5 CGTCTCTCTAAAATTGCAGTCAT ATTTGAGTTTGCCGCAATGG 23 20 39.1 45.0 57.0 57.9 0.0 6.6 4.125268 1477 2299 877-908 1.000000 56.2 trnK (UUU)-rps16_p1 trnK (UUU)-rps16 1 ATCCATTGGACCCAACCCTA ACGGTAACTATTCGTGTGCC 20 20 50.0 50.0 58.0 58.0 7.8 0.0 0.006031 10373 10883 1336-1336 0.500000 60.0 trnK (UUU)-rps16_p2 trnK (UUU)-rps16 2 TATCCATTGGACCCAACCCT ACGGTAACTATTCGTGTGCC 20 20 50.0 50.0 58.0 58.0 7.8 0.0 0.006031 10373 10883 1337-1337 0.500000 60.0 trnK (UUU)-rps16_p3 trnK (UUU)-rps16 3 CCTTACCCGTATTCAGGCAC ACGGTAACTATTCGTGTGCC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.050964 10373 10883 1478-1478 0.500000 59.6 trnK (UUU)-rps16_p4 trnK (UUU)-rps16 4 ATCCATTGGACCCAACCCTA CTCTCACCGAAATCAGGAGC 20 20 50.0 55.0 58.0 58.1 7.8 0.0 0.072355 10373 10883 1105-1105 0.500000 59.4 trnK (UUU)-rps16_p5 trnK (UUU)-rps16 5 TATCCATTGGACCCAACCCT CTCTCACCGAAATCAGGAGC 20 20 50.0 55.0 58.0 58.1 7.8 0.0 0.072355 10373 10883 1106-1106 0.500000 59.4 ORF213_p1 ORF213 1 TTCGGGAGCGAACATCAATT ACCGGCCCAATCAAAAATCT 20 20 45.0 45.0 57.9 58.1 0.0 0.0 0.170759 11188 11829 980-1409 1.000000 90.6 ORF213_p2 ORF213 2 ATTCTTGCAAGGGATAGCCG TGGGCGCTAATTGCAATTTG 20 20 50.0 45.0 58.0 58.0 25.7 28.4 0.034488 11188 11829 1713-1713 0.500000 59.7 ORF213_p3 ORF213 3 ATTCTTGCAAGGGATAGCCG ACCGGCCCAATCAAAAATCT 20 20 50.0 45.0 58.0 58.1 25.7 0.0 0.089937 11188 11829 1625-1625 0.500000 59.3 ORF213_p4 ORF213 4 TTCGGGAGCGAACATCAATT TGGGCGCTAATTGCAATTTG 20 20 45.0 45.0 57.9 58.0 0.0 28.4 0.115310 11188 11829 1497-1497 0.500000 59.1 ORF213_p5 ORF213 5 TTTTCGAAGCTCGCTTCCTT TGGGCGCTAATTGCAATTTG 20 20 45.0 45.0 58.1 58.0 22.0 28.4 0.128407 11188 11829 1520-1520 0.500000 59.0 trnS (GCU)-trnG (UCC)_p1 trnS (GCU)-trnG (UCC) 1 ACGGAAAGAGAGGGATTCGA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.2 55.5 0.0 0.0 3.687191 13503 14155 776-808 1.000000 58.6 trnS (GCU)-trnG (UCC)_p2 trnS (GCU)-trnG (UCC) 2 ACGAAAACGGAAAGAGAGGG ACGAATCACACTTTTACCACT 20 21 50.0 38.1 57.8 55.5 0.0 0.0 3.701161 13503 14155 782-814 1.000000 58.4 trnS (GCU)-trnG (UCC)_p3 trnS (GCU)-trnG (UCC) 3 ACGGAAAGAGAGGGATTCGA AGAACGAATCACACTTTTACCAC 20 23 50.0 39.1 58.2 57.3 0.0 0.0 3.819906 13503 14155 779-811 1.000000 57.5 trnS (GCU)-trnG (UCC)_p4 trnS (GCU)-trnG (UCC) 4 ACGGAAAGAGAGGGATTCGA GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.2 57.3 0.0 0.0 3.819906 13503 14155 778-810 1.000000 57.5 trnS (GCU)-trnG (UCC)_p5 trnS (GCU)-trnG (UCC) 5 ACGAAAACGGAAAGAGAGGG GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 57.8 57.3 0.0 0.0 3.833877 13503 14155 784-816 1.000000 57.3 ORF342_p1 ORF342 1 ACAGCCGTACCATTAACGTC ACTTCGTCCCCAGACTACAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.005799 31254 32282 1780-1780 0.500000 60.0 ORF342_p2 ORF342 2 ACAGCCGTACCATTAACGTC TTCGTCCCCAGACTACAAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.005799 31254 32282 1778-1778 0.500000 60.0 ORF342_p3 ORF342 3 CACGAACAGCCGTACCATTA ACTTCGTCCCCAGACTACAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.006322 31254 32282 1785-1785 0.500000 59.9 ORF342_p4 ORF342 4 CACGAACAGCCGTACCATTA TTCGTCCCCAGACTACAAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.006322 31254 32282 1783-1783 0.500000 59.9 ORF342_p5 ORF342 5 ACAGCCGTACCATTAACGTC GGTGCAGAGTCAAAAAGGGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.019173 31254 32282 1630-1630 0.500000 59.8 psbM-trnD (GUC)_p1 psbM-trnD (GUC) 1 ACTGCCAGAATATTGACTTCCA AGATCCCTTAGTTCCCTGGG 22 20 40.9 55.0 57.4 57.8 0.0 6.3 2.773008 33590 34510 1019-1035 1.000000 68.0 psbM-trnD (GUC)_p2 psbM-trnD (GUC) 2 ACTGCCAGAATATTGACTTCCA TTCAATTGGTCAGAGCACCG 22 20 40.9 50.0 57.4 58.5 0.0 5.4 3.052006 33590 34510 992-1008 1.000000 66.0 psbM-trnD (GUC)_p3 psbM-trnD (GUC) 3 ACTGCCAGAATATTGACTTCCA TCCCTTAGTTCCCTGGGATT 22 20 40.9 50.0 57.4 57.3 0.0 17.9 3.255113 33590 34510 1016-1032 1.000000 64.2 psbM-trnD (GUC)_p4 psbM-trnD (GUC) 4 AACTGCCAGAATATTGACTTCCA AGATCCCTTAGTTCCCTGGG 23 20 39.1 55.0 58.1 57.8 0.0 6.3 3.276128 33590 34510 1020-1036 1.000000 64.0 psbM-trnD (GUC)_p5 psbM-trnD (GUC) 5 ACTGCCAGAATATTGACTTCCA CCCTTAGTTCCCTGGGATTG 22 20 40.9 55.0 57.4 57.3 0.0 17.9 3.311344 33590 34510 1015-1031 1.000000 63.8 trnT (GGU)-psbD_p1 trnT (GGU)-psbD 1 AGTTCAAAACCGAAAAGGGC TTTACCAAGGGCTATAGTCA 20 20 45.0 40.0 57.1 53.0 0.0 6.7 5.873190 35160 36240 1123-1155 1.000000 49.8 trnT (GGU)-psbD_p2 trnT (GGU)-psbD 2 GTTCAAAACCGAAAAGGGCT TTTACCAAGGGCTATAGTCA 20 20 45.0 40.0 57.1 53.0 0.0 6.7 5.873190 35160 36240 1122-1154 1.000000 49.8 trnT (GGU)-psbD_p3 trnT (GGU)-psbD 3 AGTTCAAAACCGAAAAGGGC TTACCAAGGGCTATAGTCAT 20 20 45.0 40.0 57.1 52.8 0.0 6.7 6.124550 35160 36240 1122-1154 1.000000 49.8 trnT (GGU)-psbD_p4 trnT (GGU)-psbD 4 GTTCAAAACCGAAAAGGGCT TTACCAAGGGCTATAGTCAT 20 20 45.0 40.0 57.1 52.8 0.0 6.7 6.124550 35160 36240 1121-1153 1.000000 49.8 trnT (GGU)-psbD_p5 trnT (GGU)-psbD 5 GTTCAAAACCGAAAAGGGCT TTTACCAAGGGCTATAGTCAT 20 21 45.0 38.1 57.1 53.7 0.0 6.7 6.175773 35160 36240 1122-1154 1.000000 49.8 pafI-trnS (GGA)_p1 pafI-trnS (GGA) 1 GCCTAACCATTCTTCGTCGT AGGTACGTTGGGTGAAGGTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.019980 47585 48480 1473-1473 0.500000 59.8 pafI-trnS (GGA)_p2 pafI-trnS (GGA) 2 GCCTAACCATTCTTCGTCGT TAGGTACGTTGGGTGAAGGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.019980 47585 48480 1474-1474 0.500000 59.8 pafI-trnS (GGA)_p3 pafI-trnS (GGA) 3 TTTTTCCCCTGGAGTTGTCG AGGTACGTTGGGTGAAGGTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038350 47585 48480 1102-1102 0.500000 59.7 pafI-trnS (GGA)_p4 pafI-trnS (GGA) 4 TTTTTCCCCTGGAGTTGTCG TAGGTACGTTGGGTGAAGGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038350 47585 48480 1103-1103 0.500000 59.7 pafI-trnS (GGA)_p5 pafI-trnS (GGA) 5 GCCTAACCATTCTTCGTCGT GTTATCGCTGCAAACCCCTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038651 47585 48480 1855-1855 0.500000 59.7 trnT (UGU)-trnL (UAA)_p1 trnT (UGU)-trnL (UAA) 1 CTCTTGGGCTTTGGGACTTT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.005700 49763 50427 1186-1186 0.500000 60.0 trnT (UGU)-trnL (UAA)_p2 trnT (UGU)-trnL (UAA) 2 CTCTTGGGCTTTGGGACTTT CACGCTTTCGGAAGTTTCAC 20 20 50.0 50.0 58.0 58.0 0.0 5.1 0.019793 49763 50427 1438-1438 0.500000 59.8 trnT (UGU)-trnL (UAA)_p3 trnT (UGU)-trnL (UAA) 3 TATCCTCTTGGGCTTTGGGA ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024814 49763 50427 1190-1190 0.500000 59.8 trnT (UGU)-trnL (UAA)_p4 trnT (UGU)-trnL (UAA) 4 TATCCTCTTGGGCTTTGGGA CACGCTTTCGGAAGTTTCAC 20 20 50.0 50.0 58.0 58.0 0.0 5.1 0.038908 49763 50427 1442-1442 0.500000 59.7 trnT (UGU)-trnL (UAA)_p5 trnT (UGU)-trnL (UAA) 5 CTCTTGGGCTTTGGGACTTT TCACGCTTTCGGAAGTTTCA 20 20 50.0 45.0 58.0 58.1 0.0 5.1 0.058398 49763 50427 1439-1439 0.500000 59.5 cemA-pafII_p1 cemA-pafII 1 CGTCCAAGAGGAGAAGTTCG TCTTTATGCTCAGCGTGTCC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.026173 59248 60088 1202-1203 1.000000 88.7 cemA-pafII_p2 cemA-pafII 2 CGTCCAAGAGGAGAAGTTCG CTTTATGCTCAGCGTGTCCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.031763 59248 60088 1201-1202 1.000000 88.7 cemA-pafII_p3 cemA-pafII 3 CGTCCAAGAGGAGAAGTTCG GGGATCGCGGGTCTTTTTAT 20 20 55.0 50.0 58.0 58.0 0.0 6.1 0.052856 59248 60088 1399-1400 1.000000 87.9 cemA-pafII_p4 cemA-pafII 4 CGTCCAAGAGGAGAAGTTCG AAATGGAAACCGGAGCAAGT 20 20 55.0 45.0 58.0 58.0 0.0 9.5 0.020651 59248 60088 1627-1627 0.500000 59.8 cemA-pafII_p5 cemA-pafII 5 CGTCCAAGAGGAGAAGTTCG ATTTCGTGGAATGTCGGGAG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.040203 59248 60088 1358-1358 0.500000 59.7 trnA (UGC)-rrn23_p1 trnA (UGC)-rrn23 1 GGTTCGAGTCCGCTTATCTC GTCTCTGGGTGCCTAGGTAT 20 20 55.0 55.0 57.9 57.9 0.0 11.3 0.212163 93683 93830 216-216 1.000000 83.1 trnA (UGC)-rrn23_p2 trnA (UGC)-rrn23 2 GTTCGAGTCCGCTTATCTCC GTCTCTGGGTGCCTAGGTAT 20 20 55.0 55.0 57.9 57.9 0.0 11.3 0.212163 93683 93830 215-215 1.000000 83.1 trnA (UGC)-rrn23_p3 trnA (UGC)-rrn23 3 GGTTCGAGTCCGCTTATCTC ATTCGGGAATCTCCGGATCT 20 20 55.0 50.0 57.9 58.0 0.0 3.6 0.139468 93683 93830 288-288 1.000000 82.5 trnA (UGC)-rrn23_p4 trnA (UGC)-rrn23 4 GTTCGAGTCCGCTTATCTCC ATTCGGGAATCTCCGGATCT 20 20 55.0 50.0 57.9 58.0 0.0 3.6 0.139468 93683 93830 287-287 1.000000 82.5 trnA (UGC)-rrn23_p5 trnA (UGC)-rrn23 5 TTCGAGTCCGCTTATCTCCA ATTCGGGAATCTCCGGATCT 20 20 50.0 50.0 58.2 58.0 0.0 3.6 0.257969 93683 93830 286-286 1.000000 81.6 ycf1_p1 ycf1 1 CAGCGCTTCCTAGTTTAGCA TTGCTCTGTCCGATTAAGCC 20 20 50.0 50.0 58.0 58.0 7.5 0.0 0.034321 99974 100093 881-881 0.500000 59.7 ycf1_p2 ycf1 2 ACAGCGCTTCCTAGTTTAGC TTGCTCTGTCCGATTAAGCC 20 20 50.0 50.0 58.0 58.0 7.5 0.0 0.035716 99974 100093 882-882 0.500000 59.7 ycf1_p3 ycf1 3 CAGCGCTTCCTAGTTTAGCA CCGATTAAGCCTTCTTCCCC 20 20 50.0 55.0 58.0 58.0 7.5 0.0 0.041441 99974 100093 872-872 0.500000 59.7 ycf1_p4 ycf1 4 CAGCGCTTCCTAGTTTAGCA CGATTAAGCCTTCTTCCCCC 20 20 50.0 55.0 58.0 58.0 7.5 0.0 0.041441 99974 100093 871-871 0.500000 59.7 ycf1_p5 ycf1 5 ACAGCGCTTCCTAGTTTAGC CGATTAAGCCTTCTTCCCCC 20 20 50.0 55.0 58.0 58.0 7.5 0.0 0.042836 99974 100093 872-872 0.500000 59.7 ORF441_p1 ORF441 1 ACTGCCGAGGAATATCCCTT ACCACTGAGCTACTGAGGAA 20 20 50.0 50.0 58.2 57.7 0.0 11.2 0.502965 113666 114991 2008-2502 1.000000 88.0 ORF441_p2 ORF441 2 ACTGCCGAGGAATATCCCTT CCTTCGGCCTTTTCGTTTTG 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.426117 113666 114991 2625-2625 0.500000 56.6 ORF441_p3 ORF441 3 ACTGCCGAGGAATATCCCTT GAGGAACCTCAAAGTCGCTC 20 20 50.0 55.0 58.2 58.3 0.0 15.0 0.476193 113666 114991 2488-2488 0.500000 56.2 ORF441_p4 ORF441 4 ACTGCCGAGGAATATCCCTT TGGAAAAGGCCATTTCAGCA 20 20 50.0 45.0 58.2 58.3 0.0 29.1 0.477646 113666 114991 1956-1956 0.500000 56.2 ORF441_p5 ORF441 5 TCGCATTTTTGATTTGCCGG CCTTCGGCCTTTTCGTTTTG 20 20 45.0 50.0 58.3 58.2 0.0 0.0 0.526299 113666 114991 2677-2677 0.500000 55.8 rrn23-trnA (UGC)_p1 rrn23-trnA (UGC) 1 GTCTCTGGGTGCCTAGGTAT GGTTCGAGTCCGCTTATCTC 20 20 55.0 55.0 57.9 57.9 11.3 0.0 0.212163 119307 119454 216-216 1.000000 83.1 rrn23-trnA (UGC)_p2 rrn23-trnA (UGC) 2 GTCTCTGGGTGCCTAGGTAT GTTCGAGTCCGCTTATCTCC 20 20 55.0 55.0 57.9 57.9 11.3 0.0 0.212163 119307 119454 215-215 1.000000 83.1 rrn23-trnA (UGC)_p3 rrn23-trnA (UGC) 3 ATTCGGGAATCTCCGGATCT GGTTCGAGTCCGCTTATCTC 20 20 50.0 55.0 58.0 57.9 3.6 0.0 0.139468 119307 119454 288-288 1.000000 82.5 rrn23-trnA (UGC)_p4 rrn23-trnA (UGC) 4 ATTCGGGAATCTCCGGATCT GTTCGAGTCCGCTTATCTCC 20 20 50.0 55.0 58.0 57.9 3.6 0.0 0.139468 119307 119454 287-287 1.000000 82.5 rrn23-trnA (UGC)_p5 rrn23-trnA (UGC) 5 ATTCGGGAATCTCCGGATCT TTCGAGTCCGCTTATCTCCA 20 20 50.0 50.0 58.0 58.2 3.6 0.0 0.257969 119307 119454 286-286 1.000000 81.6 ORF175_p1 ORF175 1 CTATCGAGTGCAGAGAGGGA TCACTGGACTGTCTACGGTT 20 20 55.0 50.0 58.0 58.0 0.0 7.9 0.034614 134260 134787 1038-1038 0.500000 59.7 ORF175_p2 ORF175 2 CTATCGAGTGCAGAGAGGGA TTCACTGGACTGTCTACGGT 20 20 55.0 50.0 58.0 58.0 0.0 7.9 0.034614 134260 134787 1039-1039 0.500000 59.7 ORF175_p3 ORF175 3 TCTATCGAGTGCAGAGAGGG TCACTGGACTGTCTACGGTT 20 20 55.0 50.0 58.0 58.0 0.0 7.9 0.034614 134260 134787 1039-1039 0.500000 59.7 ORF175_p4 ORF175 4 TCTATCGAGTGCAGAGAGGG TTCACTGGACTGTCTACGGT 20 20 55.0 50.0 58.0 58.0 0.0 7.9 0.034614 134260 134787 1040-1040 0.500000 59.7 ORF175_p5 ORF175 5 CTATCGAGTGCAGAGAGGGA TTTGCATTCCGGCGAAAATC 20 20 55.0 45.0 58.0 58.0 0.0 9.3 0.036305 134260 134787 1180-1180 0.500000 59.7