primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ndhF_p1 ndhF 1 TCGTTGTGGTCGGACTCTAT GAGGTAAGATCCGGTGAATCG 20 21 50.0 52.4 58.2 58.0 8.2 0.0 1.184325 108876 111110 2799-2832 0.500000 50.8 ndhF_p2 ndhF 2 ATCAATTCGGTCGTTGTGGT GAGGTAAGATCCGGTGAATCG 20 21 45.0 52.4 57.8 58.0 0.0 0.0 1.193516 108876 111110 2809-2842 0.500000 50.7 ndhF_p3 ndhF 3 TCTCTTCCTTCTCCGAGCTC GAGGTAAGATCCGGTGAATCG 20 21 55.0 52.4 58.2 58.0 2.7 0.0 1.256922 108876 111110 2741-2774 0.500000 50.2 ndhF_p4 ndhF 4 TCGTTGTGGTCGGACTCTAT ACGATTTTGAAAGGCCTCAGA 20 21 50.0 42.9 58.2 57.9 8.2 5.2 1.310046 108876 111110 2889-2922 0.500000 49.8 ndhF_p5 ndhF 5 ATCAATTCGGTCGTTGTGGT ACGATTTTGAAAGGCCTCAGA 20 21 45.0 42.9 57.8 57.9 0.0 5.2 1.319237 108876 111110 2899-2932 0.500000 49.7 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCCGTCGGAAAAAGAAG CACCACCACAATGTGAGTGA 20 20 50.0 50.0 58.0 58.0 17.5 25.6 0.066479 111111 112151 1540-1547 0.500000 60.4 ndhF-rpl32_p2 ndhF-rpl32 2 TGCCGTCGGAAAAAGAAGAA CACCACCACAATGTGAGTGA 20 20 45.0 50.0 58.0 58.0 17.5 25.6 0.077769 111111 112151 1538-1545 0.500000 60.3 ndhF-rpl32_p3 ndhF-rpl32 3 TTGCCGTCGGAAAAAGAAGA CACCACCACAATGTGAGTGA 20 20 45.0 50.0 58.0 58.0 17.5 25.6 0.077769 111111 112151 1539-1546 0.500000 60.3 ndhF-rpl32_p4 ndhF-rpl32 4 GTTGCCGTCGGAAAAAGAAG AATAAGACTCCCCACCACCA 20 20 50.0 50.0 58.0 57.9 17.5 0.0 0.086161 111111 112151 1552-1559 0.500000 60.3 ndhF-rpl32_p5 ndhF-rpl32 5 TGCCGTCGGAAAAAGAAGAA AATAAGACTCCCCACCACCA 20 20 45.0 50.0 58.0 57.9 17.5 0.0 0.097450 111111 112151 1550-1557 0.500000 60.2 rpl32_p1 rpl32 1 AGGTGTATTCTTTCCTCGAGT CACCACCACAATGTGAGTGA 21 20 42.9 50.0 56.1 58.0 12.3 25.6 2.934472 112152 112316 852-858 0.500000 37.9 rpl32_p2 rpl32 2 AGGTGTATTCTTTCCTCGAGT AATAAGACTCCCCACCACCA 21 20 42.9 50.0 56.1 57.9 12.3 0.0 2.954154 112152 112316 864-870 0.500000 37.8 rpl32_p3 rpl32 3 AGGTGTATTCTTTCCTCGAGT TCTGCCCTTCTCGAGAAAGA 21 20 42.9 50.0 56.1 58.1 12.3 26.9 2.975676 112152 112316 920-926 0.500000 37.7 rpl32_p4 rpl32 4 AGGTGTATTCTTTCCTCGAGT AGTTTCTTAGGGTGTCCGGT 21 20 42.9 50.0 56.1 58.3 12.3 0.0 3.174604 112152 112316 1341-1359 0.500000 37.0 rpl32_p5 rpl32 5 AGGTGTATTCTTTCCTCGAGTT CACCACCACAATGTGAGTGA 22 20 40.9 50.0 56.8 58.0 12.3 25.6 3.194652 112152 112316 852-858 0.500000 35.8 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AAGGAAAGGATATTGGGCGG AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 57.6 58.0 0.0 0.0 0.372803 112317 113168 984-1016 0.500000 59.7 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AAGGAAAGGATATTGGGCGG CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 57.6 58.0 0.0 0.0 0.374173 112317 113168 985-1017 0.500000 59.7 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 CGGCGTTAAAAGCTTTGTCA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 57.6 58.0 13.5 0.0 0.400763 112317 113168 967-999 0.500000 59.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 CGGCGTTAAAAGCTTTGTCA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 57.6 58.0 13.5 0.0 0.402133 112317 113168 968-1000 0.500000 59.5 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AAGGAAAGGATATTGGGCGG TGATCCACAAAGAAGAGCCG 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.464114 112317 113168 1638-1671 0.500000 58.1 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TCACTCACATTGTGGTGGTG TGATCCACAAAGAAGAGCCG 20 20 50.0 50.0 58.0 57.9 25.1 0.0 0.133207 113249 113389 1313-1345 0.500000 60.8 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 TCTTTCTCGAGAAGGGCAGA TGATCCACAAAGAAGAGCCG 20 20 50.0 50.0 58.1 57.9 30.1 0.0 0.174410 113249 113389 1245-1277 0.500000 60.4 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 GTGAAATCGGTAGACACGCT TGATCCACAAAGAAGAGCCG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.106972 113249 113389 674-680 0.500000 59.5 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 TGAAATCGGTAGACACGCTG TGATCCACAAAGAAGAGCCG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.108342 113249 113389 673-679 0.500000 59.5 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 TGGTGGTGGGGAGTCTTATT TGATCCACAAAGAAGAGCCG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.152888 113249 113389 1301-1320 0.333333 53.6 ccsA_p1 ccsA 1 GTGAAATCGGTAGACACGCT AGAACCGCGTGAATCACTAC 20 20 50.0 50.0 58.0 58.0 0.0 11.9 0.015661 113390 114358 1296-1302 0.500000 60.2 ccsA_p2 ccsA 2 TGAAATCGGTAGACACGCTG AGAACCGCGTGAATCACTAC 20 20 50.0 50.0 58.0 58.0 0.0 11.9 0.017031 113390 114358 1295-1301 0.500000 60.2 ccsA_p3 ccsA 3 GTGAAATCGGTAGACACGCT GTTTTTGATTCTGGACCGCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.044083 113390 114358 1571-1578 0.500000 60.1 ccsA_p4 ccsA 4 TGAAATCGGTAGACACGCTG GTTTTTGATTCTGGACCGCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.045454 113390 114358 1570-1577 0.500000 60.0 ccsA_p5 ccsA 5 GTGAAATCGGTAGACACGCT TAGCTTTTCGATGGCTTCCC 20 20 50.0 50.0 58.0 58.0 0.0 11.4 0.046217 113390 114358 1794-1801 0.500000 60.0 ndhD_p1 ndhD 1 GTAGTGATTCACGCGGTTCT TCTGCTCCAAGAACAGAGGA 20 20 50.0 50.0 58.0 58.0 12.5 0.0 0.023287 114605 116134 1899-1900 0.500000 60.4 ndhD_p2 ndhD 2 GTAGTGATTCACGCGGTTCT AAAACTCGGGGAACTCATCG 20 20 50.0 50.0 58.0 57.9 12.5 0.0 0.102592 114605 116134 2121-2122 0.500000 59.7 ndhD_p3 ndhD 3 GTAGTGATTCACGCGGTTCT TGATACCTTGGGACGGATGT 20 20 50.0 50.0 58.0 58.1 12.5 0.0 0.133701 114605 116134 1937-1938 0.500000 59.5 ndhD_p4 ndhD 4 GTAGTGATTCACGCGGTTCT CTCGGGGAACTCATCGATTC 20 20 50.0 55.0 58.0 57.9 12.5 0.0 0.149365 114605 116134 2117-2118 0.500000 59.3 ndhD_p5 ndhD 5 GTAGTGATTCACGCGGTTCT CAGAGGATTGTGTCGGTTGT 20 20 50.0 50.0 58.0 57.8 12.5 0.0 0.177663 114605 116134 1886-1887 0.500000 59.2 psaC_p1 psaC 1 TCTTTCCTCCCCACATGGAT AAAACTCGGGGAACTCATCG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.109141 116227 116472 942-942 0.500000 59.6 psaC_p2 psaC 2 CTCCCGCCGTGTACAAAATA AAAACTCGGGGAACTCATCG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.107699 116227 116472 987-987 0.500000 59.5 psaC_p3 psaC 3 CTCCCGCCGTGTACAAAATA CTCGGGGAACTCATCGATTC 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.154472 116227 116472 983-983 0.500000 59.2 psaC_p4 psaC 4 TCTTTCCTCCCCACATGGAT CTCGGGGAACTCATCGATTC 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.155914 116227 116472 938-938 0.500000 59.2 psaC_p5 psaC 5 TTCCAAAGCCACAGGATACG AAAACTCGGGGAACTCATCG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.202712 116227 116472 1097-1097 0.500000 58.9 ndhE_p1 ndhE 1 TCCTCTGTTCTTGGAGCAGA ATTCTGCCTTTTCGTTGGGA 20 20 50.0 45.0 58.0 57.7 12.1 0.0 0.301821 116709 117011 1328-1330 0.500000 57.8 ndhE_p2 ndhE 2 TCCTCTGTTCTTGGAGCAGA TCTGCCTTTTCGTTGGGATT 20 20 50.0 45.0 58.0 57.7 12.1 0.0 0.301821 116709 117011 1326-1328 0.500000 57.8 ndhE_p3 ndhE 3 TCCTCTGTTCTTGGAGCAGA TTCTGCCTTTTCGTTGGGAT 20 20 50.0 45.0 58.0 57.7 12.1 0.0 0.301821 116709 117011 1327-1329 0.500000 57.8 ndhE_p4 ndhE 4 TCCTCTGTTCTTGGAGCAGA TAGGGGGTCTGGGAGTAGTA 20 20 50.0 55.0 58.0 57.7 12.1 0.0 0.324178 116709 117011 1367-1369 0.500000 57.7 ndhE_p5 ndhE 5 TCCTCTGTTCTTGGAGCAGA TAATCGGCGCAATTGCTGTA 20 20 50.0 45.0 58.0 58.3 12.1 26.9 0.357634 116709 117011 929-931 0.500000 57.5 ndhE-ndhG_p1 ndhE-ndhG 1 TCCTCTGTTCTTGGAGCAGA ATTCTGCCTTTTCGTTGGGA 20 20 50.0 45.0 58.0 57.7 12.1 0.0 0.301821 117012 117231 1328-1330 0.500000 57.8 ndhE-ndhG_p2 ndhE-ndhG 2 TCCTCTGTTCTTGGAGCAGA TCTGCCTTTTCGTTGGGATT 20 20 50.0 45.0 58.0 57.7 12.1 0.0 0.301821 117012 117231 1326-1328 0.500000 57.8 ndhE-ndhG_p3 ndhE-ndhG 3 TCCTCTGTTCTTGGAGCAGA TTCTGCCTTTTCGTTGGGAT 20 20 50.0 45.0 58.0 57.7 12.1 0.0 0.301821 117012 117231 1327-1329 0.500000 57.8 ndhE-ndhG_p4 ndhE-ndhG 4 TCCTCTGTTCTTGGAGCAGA TAGGGGGTCTGGGAGTAGTA 20 20 50.0 55.0 58.0 57.7 12.1 0.0 0.324178 117012 117231 1367-1369 0.500000 57.7 ndhE-ndhG_p5 ndhE-ndhG 5 TCCTCTGTTCTTGGAGCAGA TAATCGGCGCAATTGCTGTA 20 20 50.0 45.0 58.0 58.3 12.1 26.9 0.357634 117012 117231 929-931 0.500000 57.5 ndhG_p1 ndhG 1 CGATGAGTTCCCCGAGTTTT TTGATCACATCCGAGCGTTT 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.188068 117232 117762 1908-1911 0.500000 58.8 ndhG_p2 ndhG 2 GAATCGATGAGTTCCCCGAG TTGATCACATCCGAGCGTTT 20 20 55.0 45.0 57.9 57.9 0.0 0.0 0.234841 117232 117762 1912-1915 0.500000 58.5 ndhG_p3 ndhG 3 CGATGAGTTCCCCGAGTTTT TCAAATTGCTTTGGGTCGGT 20 20 50.0 45.0 57.9 58.3 0.0 0.0 0.396256 117232 117762 1633-1636 0.500000 57.2 ndhG_p4 ndhG 4 CGATGAGTTCCCCGAGTTTT TGAGGGTTTTTGCTTGGTGA 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.246264 117232 117762 1509-1509 0.333333 51.5 ndhG_p5 ndhG 5 GAATCGATGAGTTCCCCGAG TGAGGGTTTTTGCTTGGTGA 20 20 55.0 45.0 57.9 57.8 0.0 0.0 0.293037 117232 117762 1513-1513 0.333333 51.1 ndhI_p1 ndhI 1 GCCGTACCATGACGTATCTG AGCCGAGTGTGAACGATTAC 20 20 55.0 50.0 58.2 58.0 6.2 0.0 0.240542 118103 118603 1708-1709 0.500000 58.3 ndhI_p2 ndhI 2 TCACCAAGCAAAAACCCTCA AGCCGAGTGTGAACGATTAC 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.159333 118103 118603 1062-1062 0.333333 52.1 ndhI_p3 ndhI 3 TCACCAAGCAAAAACCCTCA TTTGTGACCTTTGAGGAGCC 20 20 45.0 50.0 57.8 58.0 0.0 0.1 0.170246 118103 118603 1268-1268 0.333333 52.0 ndhI_p4 ndhI 4 TCACCAAGCAAAAACCCTCA GATGGACTTTACCGAGGCTG 20 20 45.0 55.0 57.8 58.1 0.0 0.0 0.210177 118103 118603 757-757 0.333333 51.8 ndhI_p5 ndhI 5 TCACCAAGCAAAAACCCTCA GACCTTTGAGGAGCCGTATG 20 20 45.0 55.0 57.8 58.1 0.0 0.1 0.210177 118103 118603 1263-1263 0.333333 51.7 ndhA_p1 ndhA 1 TGACCAATATACCTTGCGGC GGCAAAAAGAGGGGGATTCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.101015 118682 120834 2734-2739 0.500000 59.4 ndhA_p2 ndhA 2 TGACCAATATACCTTGCGGC TGGCAAAAAGAGGGGGATTC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.101015 118682 120834 2735-2740 0.500000 59.4 ndhA_p3 ndhA 3 TGACCAATATACCTTGCGGC TTATGCGAGAGTCGAAGCAC 20 20 50.0 50.0 58.0 58.1 0.0 11.3 0.128831 118682 120834 2508-2513 0.500000 59.2 ndhA_p4 ndhA 4 TGACCAATATACCTTGCGGC TGGGAAGTCCAATGGCAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.132307 118682 120834 2747-2752 0.500000 59.1 ndhA_p5 ndhA 5 AAACGCTCGGATGTGATCAA GGCAAAAAGAGGGGGATTCA 20 20 45.0 50.0 57.9 58.1 0.0 0.0 0.156115 118682 120834 2821-2826 0.500000 58.9 ndhH_p1 ndhH 1 CGTTGTTGTATACCCGCAGA TCAACGGTTGCTGGCTTATT 20 20 50.0 45.0 58.0 58.1 0.0 15.9 0.096665 120836 122017 1550-1550 0.500000 59.4 ndhH_p2 ndhH 2 CGTTGTTGTATACCCGCAGA CAGATGGACATATGCGCTGT 20 20 50.0 50.0 58.0 58.1 0.0 9.7 0.125943 120836 122017 2045-2061 0.500000 59.3 ndhH_p3 ndhH 3 TGCGTATTCAGGGCCAATAC TCAACGGTTGCTGGCTTATT 20 20 50.0 45.0 58.0 58.1 6.2 15.9 0.133920 120836 122017 1569-1569 0.500000 59.1 ndhH_p4 ndhH 4 CCTGACATAAGAAGGCCGAC TCAACGGTTGCTGGCTTATT 20 20 55.0 45.0 58.1 58.1 0.0 15.9 0.154388 120836 122017 1814-1814 0.500000 58.9 ndhH_p5 ndhH 5 GACATAAGAAGGCCGACAGG TCAACGGTTGCTGGCTTATT 20 20 55.0 45.0 58.1 58.1 0.0 15.9 0.154388 120836 122017 1811-1811 0.500000 58.9 rps15_p1 rps15 1 TCCCAACGCGTTACATAAGG AATAATGGGAGCCGCTTGAG 20 20 50.0 50.0 58.0 58.0 26.1 0.0 0.040065 122109 122387 1044-1060 0.500000 60.3 rps15_p2 rps15 2 AACACCATGCATTGATGGGT AATAATGGGAGCCGCTTGAG 20 20 45.0 50.0 58.1 58.0 8.9 0.0 0.085751 122109 122387 907-923 0.500000 59.9 rps15_p3 rps15 3 GCAGTGACTCCTCCAATACG AATAATGGGAGCCGCTTGAG 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.099233 122109 122387 1326-1342 0.500000 59.7 rps15_p4 rps15 4 AGGAGTCTGTGCCCCAATAT AATAATGGGAGCCGCTTGAG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.128265 122109 122387 1222-1238 0.500000 59.5 rps15_p5 rps15 5 TCCCAACGCGTTACATAAGG CAGATGGACATATGCGCTGT 20 20 50.0 50.0 58.0 58.1 26.1 9.7 0.137928 122109 122387 892-908 0.500000 59.4 rps15-ycf1_p1 rps15-ycf1 1 TCCCAACGCGTTACATAAGG AATAATGGGAGCCGCTTGAG 20 20 50.0 50.0 58.0 58.0 26.1 0.0 0.040065 122388 122801 1044-1060 0.500000 60.3 rps15-ycf1_p2 rps15-ycf1 2 CCGCAGACCTCTCTGAGATA AATAATGGGAGCCGCTTGAG 20 20 55.0 50.0 58.0 58.0 8.0 0.0 0.052863 122388 122801 630-646 0.500000 60.3 rps15-ycf1_p3 rps15-ycf1 3 AACACCATGCATTGATGGGT AATAATGGGAGCCGCTTGAG 20 20 45.0 50.0 58.1 58.0 8.9 0.0 0.085751 122388 122801 907-923 0.500000 59.9 rps15-ycf1_p4 rps15-ycf1 4 AATAAGCCAGCAACCGTTGA AATAATGGGAGCCGCTTGAG 20 20 45.0 50.0 58.1 58.0 15.6 0.0 0.122841 122388 122801 667-683 0.500000 59.7 rps15-ycf1_p5 rps15-ycf1 5 CCAGAATTTTCCGCAGACCT AATAATGGGAGCCGCTTGAG 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.200743 122388 122801 640-656 0.500000 59.1 ycf1_p1 ycf1 1 CTCAAGCGGCTCCCATTATT CCTTGGTTTATCCCGAGCAA 20 20 50.0 50.0 58.0 57.9 1.4 0.0 0.149911 123242 123361 956-1010 0.500000 61.4 ycf1_p2 ycf1 2 GCGGCTCCCATTATTGGTAT CCTTGGTTTATCCCGAGCAA 20 20 50.0 50.0 57.8 57.9 3.1 0.0 0.323156 123242 123361 951-1005 0.500000 60.0 ycf1_p3 ycf1 3 CTCAAGCGGCTCCCATTATT TACGGTCTCCTGCTTAACCT 20 20 50.0 50.0 58.0 57.8 1.4 0.0 0.254090 123242 123361 623-623 0.500000 58.5 ycf1_p4 ycf1 4 CTCAAGCGGCTCCCATTATT AACCTTGGTTTATCCCGAGC 20 20 50.0 50.0 58.0 57.9 1.4 0.0 0.151405 123242 123361 958-982 0.333333 54.4 ycf1_p5 ycf1 5 GCGGCTCCCATTATTGGTAT AACCTTGGTTTATCCCGAGC 20 20 50.0 50.0 57.8 57.9 3.1 0.0 0.324650 123242 123361 953-977 0.333333 53.1