primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TCAGTGCTATGCATGGTTCC 20 20 55.0 50.0 58.1 58.0 0.0 10.2 0.171606 125 426 748-799 1.000000 87.8 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA TCAGTGCTATGCATGGTTCC 20 20 50.0 50.0 57.9 58.0 0.0 10.2 0.175967 125 426 762-813 1.000000 87.6 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 TATTTGTAGGGCGAACGACG TCAGTGCTATGCATGGTTCC 20 20 50.0 50.0 58.1 58.0 0.0 10.2 0.130685 125 426 813-813 0.090909 42.6 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 TATTTGTAGGGCGAACGACG CAGTGCTATGCATGGTTCCT 20 20 50.0 50.0 58.1 58.0 0.0 10.2 0.136443 125 426 812-812 0.090909 42.5 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 TATTTGTAGGGCGAACGACG GGTGTAGCTGGTGTATTCGG 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.152066 125 426 844-844 0.090909 42.4 psbA-trnK-UUU_p1 psbA-trnK-UUU 1 CCCCATAGGCTTTCGCTTTC CTAGTTCCGGGTTCGAATCC 20 20 55.0 55.0 59.0 57.8 0.0 18.0 1.195438 1486 1711 285-308 1.000000 80.0 psbA-trnK-UUU_p2 psbA-trnK-UUU 2 TCGCGTCTCTCTAAAATTGCA CTAGTTCCGGGTTCGAATCC 21 20 42.9 55.0 58.0 57.8 5.8 18.0 1.266163 1486 1711 267-290 1.000000 79.8 psbA-trnK-UUU_p3 psbA-trnK-UUU 3 CCCCATAGGCTTTCGCTTT CTAGTTCCGGGTTCGAATCC 19 20 52.6 55.0 57.8 57.8 0.0 18.0 1.411661 1486 1711 285-308 1.000000 78.2 psbA-trnK-UUU_p4 psbA-trnK-UUU 4 CGCGTCTCTCTAAAATTGCAG CTAGTTCCGGGTTCGAATCC 21 20 47.6 55.0 57.7 57.8 0.0 18.0 1.516032 1486 1711 266-289 1.000000 77.8 psbA-trnK-UUU_p5 psbA-trnK-UUU 5 CCCATAGGCTTTCGCTTTCG CTAGTTCCGGGTTCGAATCC 20 20 55.0 55.0 59.3 57.8 0.0 18.0 1.562639 1486 1711 284-307 1.000000 77.1 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AACGGATCGTGTCCTTCAAG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 7.8 16.9 0.156387 6162 7250 1113-1201 1.000000 88.2 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6162 7250 1096-1184 1.000000 87.8 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 CAACGGATCGTGTCCTTCAA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 7.8 16.9 0.285346 6162 7250 1114-1202 1.000000 87.1 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CGGATCGTGTCCTTCAAGTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 7.8 16.9 0.445953 6162 7250 1111-1199 1.000000 85.9 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 2.9 16.9 0.445953 6162 7250 1110-1198 1.000000 85.9 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.540425 8581 9481 824-970 1.000000 62.7 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.541813 8581 9481 823-969 1.000000 62.7 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA AGAACGAATCACACTTTTACCAC 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8581 9481 827-973 1.000000 61.6 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CAATCCGACGCTTTAGTCCA GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8581 9481 826-972 1.000000 61.6 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AATCCGACGCTTTAGTCCAC GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.674529 8581 9481 825-971 1.000000 61.6 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG TGTCCTATCCATTAGACAATG 20 21 50.0 38.1 58.0 52.4 0.0 0.0 6.598602 10262 10443 252-279 1.000000 52.0 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 ACCCTTAGCCTTCCAAGCTA TGTCCTATCCATTAGACAATG 20 21 50.0 38.1 58.0 52.4 0.0 0.0 6.601918 10262 10443 258-285 1.000000 52.0 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 CTAACGATGCGGGTTCGATT TGTCCTATCCATTAGACAATG 20 21 50.0 38.1 58.4 52.4 0.0 0.0 7.001259 10262 10443 241-268 1.000000 52.0 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 TAACGATGCGGGTTCGATTC TGTCCTATCCATTAGACAATG 20 21 50.0 38.1 58.4 52.4 0.0 0.0 7.005652 10262 10443 240-267 1.000000 52.0 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 TAACCCTTAGCCTTCCAAGC TGTCCTATCCATTAGACAATG 20 21 50.0 38.1 57.2 52.4 0.0 0.0 7.369840 10262 10443 260-287 1.000000 52.0 atpA-atpF_p1 atpA-atpF 1 CACTTGAAGTACGGTACCGG ACATGTTGGGAGCGATGAAA 20 20 55.0 45.0 58.0 57.8 35.9 0.0 0.212129 12117 12192 194-259 1.000000 87.8 atpA-atpF_p2 atpA-atpF 2 CCACTTGAAGTACGGTACCG ACATGTTGGGAGCGATGAAA 20 20 55.0 45.0 58.0 57.8 32.2 0.0 0.212129 12117 12192 195-260 1.000000 87.8 atpA-atpF_p3 atpA-atpF 3 CAATACCATCGCCCACTTGA ACATGTTGGGAGCGATGAAA 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.235784 12117 12192 207-272 1.000000 87.3 atpA-atpF_p4 atpA-atpF 4 CACTTGAAGTACGGTACCGG GACATGTTGGGAGCGATGAA 20 20 55.0 50.0 58.0 58.3 35.9 0.0 0.275464 12117 12192 195-260 1.000000 87.3 atpA-atpF_p5 atpA-atpF 5 CCACTTGAAGTACGGTACCG GACATGTTGGGAGCGATGAA 20 20 55.0 50.0 58.0 58.3 32.2 0.0 0.275464 12117 12192 196-261 1.000000 87.3 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 CCATTTATTCGCGATCTAGGC CCCTCGGTAAACAAAAGCCT 21 20 47.6 50.0 57.0 58.1 10.9 0.0 2.093591 44665 45507 702-953 1.000000 70.9 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 CCATTTATTCGCGATCTAGGC ACGGAAAGAGAGGGATTCGA 21 20 47.6 50.0 57.0 58.2 10.9 0.0 2.150577 44665 45507 723-974 1.000000 70.4 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 CCATTTATTCGCGATCTAGGC TTCCAATGCTACGCCTTGAA 21 20 47.6 45.0 57.0 57.8 10.9 5.6 2.191892 44665 45507 673-924 1.000000 70.2 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 CCATTTATTCGCGATCTAGGC ACCCTCGGTAAACAAAAGCC 21 20 47.6 50.0 57.0 58.4 10.9 0.0 2.386552 44665 45507 703-954 1.000000 68.6 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TCCATTTATTCGCGATCTAGGC CCCTCGGTAAACAAAAGCCT 22 20 45.5 50.0 58.4 58.1 10.9 0.0 2.508500 44665 45507 703-954 1.000000 67.6 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 GTTAGTCCTGGTAAAGCCCC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 57.6 57.9 0.0 0.0 0.547734 46510 46900 492-536 1.000000 85.0 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 GTTAGTCCTGGTAAAGCCCC ATGGTCATCGGTTCGATTCC 20 20 55.0 50.0 57.6 57.8 0.0 0.0 0.655487 46510 46900 460-504 1.000000 84.5 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 TTAGTCCTGGTAAAGCCCCC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.7 57.9 0.0 0.0 0.840655 46510 46900 491-535 1.000000 82.7 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 GATCACTTCCGGCTTTAGGC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.7 57.9 0.0 0.0 0.832259 46510 46900 521-565 1.000000 82.5 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 GTTAGTCCTGGTAAAGCCCC CCGCTTAGCTCAGAGGTTAG 20 20 55.0 55.0 57.6 57.5 0.0 7.6 0.915502 46510 46900 500-544 1.000000 82.0 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46974 47625 698-720 1.000000 84.8 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 46974 47625 730-752 1.000000 83.8 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 46974 47625 692-714 1.000000 83.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 46974 47625 730-752 1.000000 82.5 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT CGTCTACCGATTTCGCCATA 20 20 50.0 50.0 57.8 57.6 15.5 0.0 0.651279 46974 47625 724-746 1.000000 82.5 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA ATCATCCACGCTTGAAACGT 20 20 55.0 45.0 58.0 58.2 10.3 0.0 0.194095 48596 49231 721-819 0.909091 81.9 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CTACATTGGGAATGGTCGGG ATCATCCACGCTTGAAACGT 20 20 55.0 45.0 58.0 58.2 0.0 0.0 0.224271 48596 49231 738-836 0.909091 81.6 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 TGCTACATTGGGAATGGTCG ATCATCCACGCTTGAAACGT 20 20 50.0 45.0 58.0 58.2 0.0 0.0 0.228547 48596 49231 740-838 0.909091 81.6 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA ATCATCCACGCTTGAAACGT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.243485 48596 49231 685-783 0.909091 81.6 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 GGATGGGATGCTACATTGGG ATCATCCACGCTTGAAACGT 20 20 55.0 45.0 58.1 58.2 0.0 0.0 0.276448 48596 49231 748-846 0.909091 81.2 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CCCCCGAAATGAAAAATGCC GCACGTTGGGTCTTTGAAAC 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.187644 50902 51944 1047-1235 1.000000 87.7 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 CTCTGGCCCCTTTCTAATCG GCACGTTGGGTCTTTGAAAC 20 20 55.0 50.0 57.8 58.2 0.0 0.0 0.411598 50902 51944 1076-1264 1.000000 85.7 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 CCCCCGAAATGAAAAATGCC TGCACGTTGGGTCTTTGAAA 20 20 50.0 45.0 58.0 58.5 0.0 0.0 0.558031 50902 51944 1048-1236 1.000000 84.7 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGCTAAAACCCCCGAAATGA GCACGTTGGGTCTTTGAAAC 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.322827 50902 51944 1055-1243 0.909091 82.6 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGCTAAAACCCCCGAAATGA TGCACGTTGGGTCTTTGAAA 20 20 50.0 45.0 58.2 58.5 0.0 0.0 0.693215 50902 51944 1056-1244 0.909091 79.6 atpB-rbcL_p1 atpB-rbcL 1 GGAAACCCCAGAACCAGAAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 58.1 58.3 0.0 0.0 0.390437 54932 55702 848-886 1.000000 83.7 atpB-rbcL_p2 atpB-rbcL 2 ATGATTTGGACGATACGCCC AACACCCGCTTTGAATCCAA 20 20 50.0 45.0 58.1 58.3 0.0 0.0 0.422541 54932 55702 889-927 1.000000 83.3 atpB-rbcL_p3 atpB-rbcL 3 CCGGACCTATGATTTGGACG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 58.1 58.3 0.0 0.0 0.435629 54932 55702 897-935 1.000000 83.2 atpB-rbcL_p4 atpB-rbcL 4 GGCGGAAAGGCTACATCTAG AACACCCGCTTTGAATCCAA 20 20 55.0 45.0 57.8 58.3 0.0 0.0 0.457837 54932 55702 919-957 1.000000 82.8 atpB-rbcL_p5 atpB-rbcL 5 GGAAACCCCAGAACCAGAAG TAACACCCGCTTTGAATCCA 20 20 55.0 45.0 58.1 57.4 0.0 0.0 0.659357 54932 55702 849-887 1.000000 81.6 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 63807 64839 1062-1145 1.000000 84.1 petA-psbJ_p2 petA-psbJ 2 TCGAGAAGGTTCAATTGGCC TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 63807 64839 1064-1147 1.000000 84.1 petA-psbJ_p3 petA-psbJ 3 GAGAAGGTTCAATTGGCCGA CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 63807 64839 1061-1144 1.000000 83.6 petA-psbJ_p4 petA-psbJ 4 TCGAGAAGGTTCAATTGGCC CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 63807 64839 1063-1146 1.000000 83.6 petA-psbJ_p5 petA-psbJ 5 AGAAGGTTCAATTGGCCGAA TCCGGATTAGGTTCATCCCT 20 20 45.0 50.0 57.7 57.5 5.4 0.0 0.775892 63807 64839 1061-1144 1.000000 83.2 ndhF_p1 ndhF 1 CGATGCAACAACAAGACGTT ACGTCGAATTTTGCAATCCG 20 20 45.0 45.0 57.6 57.8 0.0 0.0 0.624557 109894 112179 2765-2825 0.727273 67.4 ndhF_p2 ndhF 2 TCGATGCAACAACAAGACGT ACGTCGAATTTTGCAATCCG 20 20 45.0 45.0 58.4 57.8 0.0 0.0 0.663791 109894 112179 2766-2826 0.727273 67.1 ndhF_p3 ndhF 3 CGATGCAACAACAAGACGTT CGTCGAATTTTGCAATCCGA 20 20 45.0 45.0 57.6 57.5 0.0 0.0 0.902300 109894 112179 2764-2824 0.727273 65.2 ndhF_p4 ndhF 4 TTCGATGCAACAACAAGACG ACGTCGAATTTTGCAATCCG 20 20 45.0 45.0 57.3 57.8 0.0 0.0 0.902763 109894 112179 2767-2827 0.727273 65.2 ndhF_p5 ndhF 5 TCGATGCAACAACAAGACGT CGTCGAATTTTGCAATCCGA 20 20 45.0 45.0 58.4 57.5 0.0 0.0 0.941534 109894 112179 2765-2825 0.727273 64.9 ndhF-rpl32_p1 ndhF-rpl32 1 GCAAGAGGTCGTGTAAACCA ACGATGCACAATACCCCTTC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.164689 112180 112972 1182-1398 1.000000 89.5 ndhF-rpl32_p2 ndhF-rpl32 2 AATAGAGCAGCACACAACGT ACGATGCACAATACCCCTTC 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.208219 112180 112972 1368-1584 1.000000 88.8 ndhF-rpl32_p3 ndhF-rpl32 3 GCAGCACACAACGTAACAAA ACGATGCACAATACCCCTTC 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.219812 112180 112972 1362-1578 1.000000 88.7 ndhF-rpl32_p4 ndhF-rpl32 4 GCAAGAGGTCGTGTAAACCA TTCTCAAAGCGGCGAGAATT 20 20 50.0 45.0 58.1 58.2 0.0 13.0 0.317892 112180 112972 1395-1610 1.000000 88.3 ndhF-rpl32_p5 ndhF-rpl32 5 AAACCAAAATCCCCTACCCG ACGATGCACAATACCCCTTC 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.263769 112180 112972 1247-1452 0.727273 74.4 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TTTTTGTGCGACAAACAAAT TTTAGGAGATGACATGCCGC 20 20 30.0 50.0 53.4 58.0 12.1 0.0 4.669997 113135 114036 765-1025 1.000000 52.5 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TTTTTGTGCGACAAACAAAT TCCTAAGAGCAGCGTGTCTA 20 20 30.0 50.0 53.4 57.9 12.1 0.0 4.747833 113135 114036 710-970 1.000000 52.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TTTTTGTGCGACAAACAAAT AGCAGCGTGTCTACCAATTT 20 20 30.0 45.0 53.4 57.8 12.1 0.0 4.808560 113135 114036 703-963 1.000000 51.7 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TTTTTGTGCGACAAACAAAT CCTAAGAGCAGCGTGTCTAC 20 20 30.0 55.0 53.4 57.8 12.1 0.0 4.819851 113135 114036 709-969 1.000000 51.6 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TTTTTGTGCGACAAACAAAT CTAAGAGCAGCGTGTCTACC 20 20 30.0 55.0 53.4 57.8 12.1 0.0 4.819851 113135 114036 708-968 1.000000 51.6 ycf1_p1 ycf1 1 CTTCCTTTCCATTGACTCGGA GCAGAATACCGTCACCCATT 21 20 47.6 50.0 57.7 58.0 0.0 0.0 1.372969 128147 128266 204-233 0.909091 77.4 ycf1_p2 ycf1 2 TCTTCCTTTCCATTGACTCGG GCAGAATACCGTCACCCATT 21 20 47.6 50.0 57.7 58.0 0.0 0.0 1.372969 128147 128266 205-234 0.909091 77.4 ycf1_p3 ycf1 3 TTCCTTTCCATTGACTCGGA GCAGAATACCGTCACCCATT 20 20 45.0 50.0 56.5 58.0 0.0 0.0 1.575227 128147 128266 203-232 0.909091 75.8 ycf1_p4 ycf1 4 CTTCCTTTCCATTGACTCGGA CGGAAGAAAGGGTGGAAAGT 21 20 47.6 50.0 57.7 57.7 0.0 0.0 1.606526 128147 128266 171-182 0.727273 67.1 ycf1_p5 ycf1 5 CTTCCTTTCCATTGACTCGGA ACGGAAGAAAGGGTGGAAAG 21 20 47.6 50.0 57.7 57.7 0.0 0.0 1.606526 128147 128266 172-183 0.727273 67.0