primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-trnQ-UUG_p1 trnK-UUU-trnQ-UUG 1 AAAGCCGAGTACTCTACCGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 20.3 16.9 0.244521 4290 5049 386-823 1.000000 90.0 trnK-UUU-trnQ-UUG_p2 trnK-UUU-trnQ-UUG 2 AAGCCGAGTACTCTACCGTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 20.3 16.9 0.244521 4290 5049 385-822 1.000000 90.0 trnK-UUU-trnQ-UUG_p3 trnK-UUU-trnQ-UUG 3 TCTAGCCGCACTTAAAAGCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.3 58.1 0.0 16.9 0.341938 4290 5049 400-837 1.000000 89.3 trnK-UUU-trnQ-UUG_p4 trnK-UUU-trnQ-UUG 4 CCGCACTTAAAAGCCGAGTA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.3 58.1 5.3 16.9 0.358907 4290 5049 395-832 1.000000 89.1 trnK-UUU-trnQ-UUG_p5 trnK-UUU-trnQ-UUG 5 AAGCCGAGTACTCTACCGTT CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.2 57.8 20.3 16.9 0.379772 4290 5049 389-826 1.000000 89.0 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.0 56.4 0.0 0.0 1.640998 6430 7127 792-863 1.000000 76.8 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.0 56.4 0.0 0.0 1.642386 6430 7127 791-862 1.000000 76.8 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA AAACCGAAAGACCCCTTAACT 20 21 50.0 42.9 58.0 57.1 0.0 0.0 1.875121 6430 7127 793-864 1.000000 74.9 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 AATCCGACGCTTTAGTCCAC AAACCGAAAGACCCCTTAACT 20 21 50.0 42.9 58.0 57.1 0.0 0.0 1.876509 6430 7127 792-863 1.000000 74.9 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AGCAATCCGACGCTTTAGTC AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.4 56.4 0.0 0.0 1.994839 6430 7127 794-865 1.000000 74.0 atpF-atpH_p1 atpF-atpH 1 CGACCCAAGGAAACGAAAGA AATTTACGGACTGGTCGTGG 20 20 50.0 50.0 58.1 57.9 0.0 7.6 0.215252 11193 11615 501-519 1.000000 89.0 atpF-atpH_p2 atpF-atpH 2 TTAAATCCGAAACTCCCGGC AATTTACGGACTGGTCGTGG 20 20 50.0 50.0 58.3 57.9 0.0 7.6 0.347421 11193 11615 531-546 0.961538 85.0 atpF-atpH_p3 atpF-atpH 3 CGACCCAAGGAAACGAAAGA ACAATTTACGGACTGGTCGT 20 20 50.0 45.0 58.1 57.2 0.0 0.0 0.952163 11193 11615 503-521 1.000000 83.1 atpF-atpH_p4 atpF-atpH 4 CGACCCAAGGAAACGAAAGA GGTCGTGGCATTAGCACTTT 20 20 50.0 50.0 58.1 58.8 0.0 0.0 0.961033 11193 11615 489-507 1.000000 83.0 atpF-atpH_p5 atpF-atpH 5 TTAAATCCGAAACTCCCGGC ACAATTTACGGACTGGTCGT 20 20 50.0 45.0 58.3 57.2 0.0 0.0 1.084333 11193 11615 533-548 0.961538 79.1 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 ATTCCCTCATTTCCATCCCG CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.3 58.1 0.0 0.0 0.746530 25057 26157 1132-1272 0.961538 81.9 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 ATTCCCTCATTTCCATCCCG TTTCTTGATCAGGCGACACC 20 20 50.0 50.0 57.3 58.2 0.0 0.0 0.855991 25057 26157 1151-1291 0.961538 81.1 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 ATTCCCTCATTTCCATCCCG AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 57.3 58.4 0.0 14.6 1.019893 25057 26157 1114-1254 0.961538 79.7 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 ACATTCCCTCATTTCCATCCC CCGGATTTGAACTGGGGAAA 21 20 47.6 50.0 57.7 58.1 0.0 0.0 1.401159 25057 26157 1134-1274 0.961538 76.6 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 ATTCCCTCATTTCCATCCCG GACACCCGGATTTGAACTGG 20 20 50.0 55.0 57.3 58.8 0.0 0.7 1.499132 25057 26157 1137-1277 0.961538 75.8 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.088172 26229 27114 930-959 1.000000 88.7 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG CAGCCCAAGCAAGACTTACT 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.273256 26229 27114 924-953 1.000000 87.3 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTATCGTTTTGGCGGCATG TTAAAGCAGCCCAAGCAAGA 20 20 45.0 45.0 57.7 58.0 14.3 0.0 0.276319 26229 27114 983-1012 1.000000 86.7 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGGGACTGCAAATCCTTTT TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.4 58.0 14.7 0.0 0.361535 26229 27114 948-977 1.000000 86.4 trnC-GCA-petN_p5 trnC-GCA-petN 5 TTTCCCCAGTTCAAATCCGG AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.432990 26229 27114 984-1013 1.000000 85.5 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GCCCTTTTAACTCAGCGGTA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.349607 31129 32681 1628-1739 1.000000 88.2 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GCCCTTTTAACTCAGCGGTA GACCGGACCAACCTACAAAA 20 20 50.0 50.0 57.9 57.7 0.0 9.5 0.362803 31129 32681 1642-1753 1.000000 88.1 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 ACAGGCCCTTTTAACTCAGC ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.335012 31129 32681 1632-1743 0.923077 81.7 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 ACAGGCCCTTTTAACTCAGC GACCGGACCAACCTACAAAA 20 20 50.0 50.0 58.1 57.7 0.0 9.5 0.348209 31129 32681 1646-1757 0.923077 81.6 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 ACAGGCCCTTTTAACTCAGC TAGACCGGACCAACCTACAA 20 20 50.0 50.0 58.1 57.7 0.0 9.5 0.396439 31129 32681 1648-1759 0.923077 81.2 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 CATTTATCCGCGATCTAGGCA CCCTCGGTAAACAAAAGCCT 21 20 47.6 50.0 58.0 58.1 8.2 0.0 1.134847 44264 45130 945-962 1.000000 79.0 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 CATTTATCCGCGATCTAGGCA TTCCAATGCTACGCCTTGAA 21 20 47.6 45.0 58.0 57.8 8.2 5.6 1.233148 44264 45130 916-933 1.000000 78.5 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 CATTTATCCGCGATCTAGGCA ACGGAAAGAGAGGGATTCGA 21 20 47.6 50.0 58.0 58.2 8.2 0.0 1.191833 44264 45130 966-983 1.000000 78.4 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 CATTTATCCGCGATCTAGGCA ACCCTCGGTAAACAAAAGCC 21 20 47.6 50.0 58.0 58.4 8.2 0.0 1.427808 44264 45130 946-963 1.000000 76.7 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TTTATCCGCGATCTAGGCAT CCCTCGGTAAACAAAAGCCT 20 20 45.0 50.0 56.6 58.1 8.2 0.0 1.514239 44264 45130 943-960 1.000000 75.9 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 46597 47294 710-797 1.000000 89.2 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 TAGACAAAAGCCGGCTATCG TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 33.1 0.0 0.288386 46597 47294 761-848 1.000000 88.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 46597 47294 702-789 0.923077 86.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 TAGACAAAAGCCGGCTATCG ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 33.1 0.0 0.223577 46597 47294 753-840 0.923077 85.4 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 46597 47294 734-821 0.923077 85.4 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GGGCCAAAACTCCGGAAATT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 59.0 57.8 5.2 0.0 1.223651 50727 51796 1007-1236 1.000000 80.0 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TAATTGGGGCCAAAACTCCG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.4 57.8 4.4 0.0 0.645831 50727 51796 1013-1226 0.923077 78.5 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TAATTGGGGCCAAAACTCCG GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 58.4 57.5 4.4 0.0 0.989603 50727 51796 1012-1225 0.923077 75.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TAATTGGGGCCAAAACTCCG GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 58.4 58.7 4.4 0.0 1.131897 50727 51796 1001-1214 0.923077 74.7 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TAATTGGGGCCAAAACTCCG AAGGTCTACGGTTCGAGTCC 20 20 50.0 55.0 58.4 58.8 4.4 0.0 1.276373 50727 51796 1011-1224 0.923077 73.5 rbcL-accD_p1 rbcL-accD 1 TGCAAATGGAGCCTTGAACT TAGCCCACACCTGTGTTCTA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.018707 57000 57705 832-858 0.961538 86.1 rbcL-accD_p2 rbcL-accD 2 AATGGAGCCTTGAACTAGCC TAGCCCACACCTGTGTTCTA 20 20 50.0 50.0 57.6 58.0 0.0 0.0 0.445198 57000 57705 828-854 0.961538 82.7 rbcL-accD_p3 rbcL-accD 3 TGCAAATGGAGCCTTGAACT CTTAGCCCACACCTGTGTTC 20 20 45.0 55.0 58.0 58.5 0.0 0.0 0.476594 57000 57705 834-860 0.961538 82.4 rbcL-accD_p4 rbcL-accD 4 TGCAAATGGAGCCTTGAACT GGGACCAATACCTTCTAGCG 20 20 45.0 55.0 58.0 57.5 0.0 0.0 0.528393 57000 57705 859-885 0.961538 82.4 rbcL-accD_p5 rbcL-accD 5 TGCAAATGGAGCCTTGAACT TACTTAGCCCACACCTGTGT 20 20 45.0 50.0 58.0 58.3 0.0 4.8 0.275807 57000 57705 836-862 0.923077 78.9 petA-psbJ_p1 petA-psbJ 1 TGGCATCTGTTATTCTGGCA ATTCTGGGTTGGGTTCATCC 20 20 45.0 50.0 57.2 57.5 0.0 0.0 1.337236 63449 63891 546-558 0.961538 77.8 petA-psbJ_p2 petA-psbJ 2 TTGGCATCTGTTATTCTGGCA ATTCTGGGTTGGGTTCATCC 21 20 42.9 50.0 57.9 57.5 0.0 0.0 1.616786 63449 63891 547-559 0.961538 75.5 petA-psbJ_p3 petA-psbJ 3 GGCATCTGTTATTCTGGCAC ATTCTGGGTTGGGTTCATCC 20 20 50.0 50.0 56.9 57.5 0.0 0.0 1.675848 63449 63891 545-557 0.961538 75.1 petA-psbJ_p4 petA-psbJ 4 TGGCATCTGTTATTCTGGCA TGGCTTATAGGCACTGTAGC 20 20 45.0 50.0 57.2 57.1 0.0 9.3 1.715674 63449 63891 613-625 0.961538 73.8 petA-psbJ_p5 petA-psbJ 5 TGGCATCTGTTATTCTGGCA GGCACTGTAGCTGGTATTCT 20 20 45.0 50.0 57.2 57.0 0.0 0.0 1.795052 63449 63891 604-616 0.961538 73.3 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 ACCCGTGACATTTTGTACCC AATGTCAACGCATCTGGGAA 20 20 50.0 45.0 58.1 57.8 0.0 0.8 0.298581 66663 67350 80-903 1.000000 89.6 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CCCGTGACATTTTGTACCCA AATGTCAACGCATCTGGGAA 20 20 50.0 45.0 58.1 57.8 0.0 0.8 0.299925 66663 67350 80-902 1.000000 89.6 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 ACAGGATTTGAACCCGTGAC AATGTCAACGCATCTGGGAA 20 20 50.0 45.0 58.1 57.8 0.0 0.8 0.306617 66663 67350 80-914 1.000000 89.5 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 CAGGATTTGAACCCGTGACA AATGTCAACGCATCTGGGAA 20 20 50.0 45.0 58.1 57.8 0.0 0.8 0.307951 66663 67350 80-913 1.000000 89.5 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 TGACAGGATTTGAACCCGTG AATGTCAACGCATCTGGGAA 20 20 50.0 45.0 58.1 57.8 0.0 0.8 0.307951 66663 67350 82-916 1.000000 89.5 rpl33-rps18_p1 rpl33-rps18 1 CGACACAATACGCCTAGTCG AATCAATTCGATCCCCCGAC 20 20 55.0 50.0 58.5 57.7 0.0 0.0 0.792312 68084 68256 343-1380 1.000000 83.4 rpl33-rps18_p2 rpl33-rps18 2 GCATACGATTCATGGGGAGA AATCAATTCGATCCCCCGAC 20 20 50.0 50.0 57.2 57.7 0.0 0.0 1.095603 68084 68256 287-1378 1.000000 81.6 rpl33-rps18_p3 rpl33-rps18 3 AGCATACGATTCATGGGGAG AATCAATTCGATCCCCCGAC 20 20 50.0 50.0 57.2 57.7 0.0 0.0 1.103444 68084 68256 288-1378 1.000000 81.5 rpl33-rps18_p4 rpl33-rps18 4 GACACAATACGCCTAGTCGA AATCAATTCGATCCCCCGAC 20 20 50.0 50.0 57.2 57.7 0.0 0.0 1.094504 68084 68256 342-1379 1.000000 81.0 rpl33-rps18_p5 rpl33-rps18 5 TCGACACAATACGCCTAGTC AATCAATTCGATCCCCCGAC 20 20 50.0 50.0 57.2 57.7 0.0 0.0 1.094504 68084 68256 344-1378 1.000000 81.0 rps8-rpl14_p1 rps8-rpl14 1 AGCAATAGTGTCCCTACCCA GAACTCGAGTTTTTGGTGCG 20 20 50.0 50.0 57.7 58.0 0.0 30.2 0.282612 80917 81160 334-371 0.923077 83.0 rps8-rpl14_p2 rps8-rpl14 2 AGCAATAGTGTCCCTACCCA GCTCGGGAATTGAGACAGTT 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.364500 80917 81160 311-348 0.923077 82.6 rps8-rpl14_p3 rps8-rpl14 3 AGCAATAGTGTCCCTACCCA ACTCGAGTTTTTGGTGCGAT 20 20 50.0 45.0 57.7 58.1 0.0 13.6 0.384942 80917 81160 332-369 0.923077 82.2 rps8-rpl14_p4 rps8-rpl14 4 AGCAATAGTGTCCCTACCCA AACTCGAGTTTTTGGTGCGA 20 20 50.0 45.0 57.7 58.3 0.0 24.9 0.604901 80917 81160 333-370 0.923077 80.4 rps8-rpl14_p5 rps8-rpl14 5 CAGCAATAGTGTCCCTACCC GAACTCGAGTTTTTGGTGCG 20 20 55.0 50.0 57.4 58.0 0.0 30.2 0.640781 80917 81160 335-372 0.923077 80.1 rpl16_p1 rpl16 1 TTTTTCACAGGGCCCCTTTT TGACTCCATATACCATATAATTGCT 20 25 45.0 32.0 58.1 55.5 21.4 0.0 7.638457 81652 83180 1584-1607 0.269231 11.9 rpl16_p2 rpl16 2 TTTTTCACAGGGCCCCTTTT TTGACTCCATATACCATATAATTGCT 20 26 45.0 30.8 58.1 56.1 21.4 0.0 7.978569 81652 83180 1585-1608 0.269231 11.9 rpl16_p3 rpl16 3 TTTTTCACAGGGCCCCTTTT TGACTCCATATACCATATAATTGC 20 24 45.0 33.3 58.1 54.1 21.4 0.0 8.005325 81652 83180 1584-1607 0.269231 11.9 rpl16_p4 rpl16 4 TTTTCACAGGGCCCCTTTTC TGACTCCATATACCATATAATTGCT 20 25 50.0 32.0 58.6 55.5 21.4 0.0 8.105499 81652 83180 1583-1606 0.269231 11.9 rpl16_p5 rpl16 5 TTTTTCACAGGGCCCCTTTT GACTCCATATACCATATAATTGCT 20 24 45.0 33.3 58.1 53.8 21.4 0.0 8.268794 81652 83180 1583-1606 0.269231 11.9 ndhF-trnL-UAG_p1 ndhF-trnL-UAG 1 GGTATGATCCACGCATATTGA AGCGTGTCTACCGATTTCAC 21 20 42.9 50.0 55.6 58.0 0.0 0.0 3.380041 113625 114485 660-953 1.000000 65.0 ndhF-trnL-UAG_p2 ndhF-trnL-UAG 2 GGTATGATCCACGCATATTGA CAGCGTGTCTACCGATTTCA 21 20 42.9 50.0 55.6 58.0 0.0 0.0 3.381412 113625 114485 661-954 1.000000 64.9 ndhF-trnL-UAG_p3 ndhF-trnL-UAG 3 GGTATGATCCACGCATATTGA TCCTAAGAGCAGCGTGTCTA 21 20 42.9 50.0 55.6 57.9 0.0 0.0 3.496488 113625 114485 670-963 1.000000 64.0 ndhF-trnL-UAG_p4 ndhF-trnL-UAG 4 GGTATGATCCACGCATATTGA TTATAAGATGCCGCCACTCG 21 20 42.9 50.0 55.6 57.9 0.0 0.0 3.521126 113625 114485 719-1012 1.000000 63.6 ndhF-trnL-UAG_p5 ndhF-trnL-UAG 5 GGTATGATCCACGCATATTGA CTAAGAGCAGCGTGTCTACC 21 20 42.9 55.0 55.6 57.8 0.0 0.0 3.568506 113625 114485 668-961 1.000000 63.5 ycf1_p1 ycf1 1 TGGCTATTATCAACAAAGGCA ACGATTATGGCGAGAAAGGG 21 20 38.1 50.0 55.5 57.8 0.0 0.0 3.695364 127127 127246 192-207 1.000000 61.3 ycf1_p2 ycf1 2 TGGCTATTATCAACAAAGGCA AAGGGCGCGGAATTAAAGAT 21 20 38.1 45.0 55.5 57.9 0.0 8.8 3.507653 127127 127246 214-223 0.923077 59.4 ycf1_p3 ycf1 3 TGGCTATTATCAACAAAGGCA AGGGCGCGGAATTAAAGATT 21 20 38.1 45.0 55.5 57.9 0.0 8.8 3.507653 127127 127246 213-222 0.923077 59.4 ycf1_p4 ycf1 4 TGGCTATTATCAACAAAGGCAA AAGGGCGCGGAATTAAAGAT 22 20 36.4 45.0 56.3 57.9 0.0 8.8 3.742889 127127 127246 214-223 0.923077 57.5 ycf1_p5 ycf1 5 TGGCTATTATCAACAAAGGCAA AGGGCGCGGAATTAAAGATT 22 20 36.4 45.0 56.3 57.9 0.0 8.8 3.742889 127127 127246 213-222 0.923077 57.5