primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score atpF-atpH_p1 atpF-atpH 1 CCAGTAACCCAAGCAAAGGA GGCTGGTTGTAGCATTAGCA 20 20 50.0 50.0 57.7 58.2 0.0 0.0 0.536172 17605 18248 723-733 1.000000 79.6 atpF-atpH_p2 atpF-atpH 2 CCAGTAACCCAAGCAAAGGA TGGGCTGGTTGTAGCATTAG 20 20 50.0 50.0 57.7 57.6 0.0 0.0 0.704733 17605 18248 725-735 1.000000 78.2 atpF-atpH_p3 atpF-atpH 3 CCAGTAACCCAAGCAAAGGA AGGCAGAGGGAAAAATACGG 20 20 50.0 50.0 57.7 57.6 0.0 0.0 0.706423 17605 18248 792-802 1.000000 77.9 atpF-atpH_p4 atpF-atpH 4 CCAGTAACCCAAGCAAAGGA CCTGAGGCAGAGGGAAAAAT 20 20 50.0 50.0 57.7 57.5 0.0 0.0 0.807911 17605 18248 796-806 1.000000 77.0 atpF-atpH_p5 atpF-atpH 5 CCAGTAACCCAAGCAAAGGA GCAGAGGGAAAAATACGGGG 20 20 50.0 55.0 57.7 58.6 0.0 0.0 0.896809 17605 18248 790-800 1.000000 76.3 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CTTCTCCTGATGGTTGGTCG CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 58.0 57.8 0.0 1.1 0.185568 41144 41708 716-719 1.000000 81.9 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 TTGCTTCTCCTGATGGTTGG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.374855 41144 41708 719-722 1.000000 80.3 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 TCCTGATGGTTGGTCGAGTA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.395214 41144 41708 712-715 1.000000 80.2 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 GCTTCTCCTGATGGTTGGTC CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 58.3 57.8 0.0 1.1 0.425837 41144 41708 717-720 1.000000 79.9 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 TTCTCCTGATGGTTGGTCGA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.4 57.8 0.0 1.1 0.530110 41144 41708 715-718 1.000000 79.1 ycf1_p1 ycf1 1 AACAGAATACGCGGATCGAG AGCCAAAGCCTTACAGCAAT 20 20 50.0 45.0 57.9 58.1 12.5 0.0 0.192248 116077 116196 748-748 0.500000 58.5 ycf1_p2 ycf1 2 TAACCCGTGGATCATACCCA AGCCAAAGCCTTACAGCAAT 20 20 50.0 45.0 57.8 58.1 0.0 0.0 0.248943 116077 116196 916-916 0.500000 58.0 ycf1_p3 ycf1 3 AACAGAATACGCGGATCGAG CCTACGACGTCTAGCGGATA 20 20 50.0 55.0 57.9 58.2 12.5 14.7 0.332858 116077 116196 640-640 0.500000 57.3 ycf1_p4 ycf1 4 ACAGGCCTTTCGTTGATTCA AGCCAAAGCCTTACAGCAAT 20 20 45.0 45.0 57.7 58.1 0.0 0.0 0.341484 116077 116196 300-300 0.500000 57.3 ycf1_p5 ycf1 5 TCACAGGCCTTTCGTTGATT AGCCAAAGCCTTACAGCAAT 20 20 45.0 45.0 57.7 58.1 0.0 0.0 0.341484 116077 116196 302-302 0.500000 57.3 ycf1-rps15_p1 ycf1-rps15 1 ATTGCTGTAAGGCTTTGGCT AACACCATGCATTGATGGGT 20 20 45.0 45.0 58.1 58.1 4.4 8.9 0.129755 116515 116928 1060-1060 0.500000 59.0 ycf1-rps15_p2 ycf1-rps15 2 ATTGCTGTAAGGCTTTGGCT TGCCATAAAAGGTCCCAACC 20 20 45.0 50.0 58.1 58.1 4.4 0.0 0.139497 116515 116928 1354-1354 0.500000 58.9 ycf1-rps15_p3 ycf1-rps15 3 ATTGCTGTAAGGCTTTGGCT ATTTCCCAACAGTTCCGGTC 20 20 45.0 50.0 58.1 58.1 4.4 0.0 0.165494 116515 116928 1258-1258 0.500000 58.7 ycf1-rps15_p4 ycf1-rps15 4 ATTGCTGTAAGGCTTTGGCT CCGATCCGTGGTTTTCTTCT 20 20 45.0 50.0 58.1 57.9 4.4 0.0 0.165894 116515 116928 678-678 0.500000 58.7 ycf1-rps15_p5 ycf1-rps15 5 ATTGCTGTAAGGCTTTGGCT TAATCGTTGCCGTTTTCCCA 20 20 45.0 45.0 58.1 58.1 4.4 0.0 0.177587 116515 116928 803-803 0.500000 58.6 rps15-ndhH_p1 rps15-ndhH 1 AAAACCACGGATCGGTTGAA AACACCATGCATTGATGGGT 20 20 45.0 45.0 58.0 58.1 10.9 8.9 0.088531 117196 117302 397-397 0.500000 59.3 rps15-ndhH_p2 rps15-ndhH 2 AAAACCACGGATCGGTTGAA TGCCATAAAAGGTCCCAACC 20 20 45.0 50.0 58.0 58.1 10.9 0.0 0.098273 117196 117302 691-691 0.500000 59.2 rps15-ndhH_p3 rps15-ndhH 3 AAAACCACGGATCGGTTGAA ATTTCCCAACAGTTCCGGTC 20 20 45.0 50.0 58.0 58.1 10.9 0.0 0.124271 117196 117302 595-595 0.500000 59.0 rps15-ndhH_p4 rps15-ndhH 4 AAAACCACGGATCGGTTGAA ATCGGTCCTGATAAACCCCA 20 20 45.0 50.0 58.0 58.1 10.9 0.0 0.142111 117196 117302 990-990 0.500000 58.9 rps15-ndhH_p5 rps15-ndhH 5 AGAAGAAAACCACGGATCGG AACACCATGCATTGATGGGT 20 20 50.0 45.0 57.9 58.1 0.0 8.9 0.153385 117196 117302 402-402 0.500000 58.8 ndhH_p1 ndhH 1 AAAACCACGGATCGGTTGAA CTAGGAAAGCGGCATAGCAA 20 20 45.0 50.0 58.0 58.0 10.9 1.4 0.076349 117303 118484 2113-2113 0.500000 59.4 ndhH_p2 ndhH 2 AAAACCACGGATCGGTTGAA CGTTGTTGTATCCCTGCAGA 20 20 45.0 50.0 58.0 57.9 10.9 17.4 0.123214 117303 118484 1687-1687 0.500000 59.0 ndhH_p3 ndhH 3 AAAACCACGGATCGGTTGAA AAGCGGCATAGCAATAGCAT 20 20 45.0 45.0 58.0 58.1 10.9 1.4 0.128317 117303 118484 2107-2107 0.500000 59.0 ndhH_p4 ndhH 4 AAAACCACGGATCGGTTGAA GCTTGAAGAACTCCTCCAGG 20 20 45.0 55.0 58.0 57.9 10.9 0.0 0.136385 117303 118484 1729-1729 0.500000 58.9 ndhH_p5 ndhH 5 AGAAGAAAACCACGGATCGG CTAGGAAAGCGGCATAGCAA 20 20 50.0 50.0 57.9 58.0 0.0 1.4 0.141203 117303 118484 2118-2118 0.500000 58.9 ndhA_p1 ndhA 1 AGAGTTGAAGCCCCAAAAGG CTCGGACTGTTTGTTGACCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.052972 118486 120786 2631-2631 0.500000 59.6 ndhA_p2 ndhA 2 TTCGTCCACCGGGTTTTATC CTCGGACTGTTTGTTGACCA 20 20 50.0 50.0 57.9 58.1 6.3 0.0 0.149575 118486 120786 2555-2555 0.500000 58.8 ndhA_p3 ndhA 3 TGGGGTTTATCAGGACCGAT CTCGGACTGTTTGTTGACCA 20 20 50.0 50.0 58.1 58.1 4.6 0.0 0.164099 118486 120786 2967-2967 0.500000 58.7 ndhA_p4 ndhA 4 TCCGACTTTTGAATTGCCGA CTCGGACTGTTTGTTGACCA 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.166336 118486 120786 2668-2668 0.500000 58.7 ndhA_p5 ndhA 5 TTCGTCCACCGGGTTTTATC CGGCCCAAAGCAATTTGATT 20 20 50.0 45.0 57.9 57.9 6.3 0.0 0.195359 118486 120786 2934-2934 0.500000 58.4 ndhI_p1 ndhI 1 ACAGTTCTTTACTTGGGCGG GTGCTGCAGCTACAAAATGG 20 20 50.0 50.0 58.1 58.0 0.0 36.6 0.121093 120866 121348 1501-1501 0.500000 59.0 ndhI_p2 ndhI 2 CAGTTCTTTACTTGGGCGGT GTGCTGCAGCTACAAAATGG 20 20 50.0 50.0 58.1 58.0 0.0 36.6 0.121093 120866 121348 1500-1500 0.500000 59.0 ndhI_p3 ndhI 3 ACAGTTCTTTACTTGGGCGG CAAGAACCAGTCCCAACGAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.145997 120866 121348 1447-1447 0.500000 58.8 ndhI_p4 ndhI 4 CAGTTCTTTACTTGGGCGGT CAAGAACCAGTCCCAACGAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.145997 120866 121348 1446-1446 0.500000 58.8 ndhI_p5 ndhI 5 CAGTTCTTTACTTGGGCGGT GGACCAATGTCATTCCCCTC 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.166383 120866 121348 1174-1174 0.500000 58.7 ndhI-ndhG_p1 ndhI-ndhG 1 TGGTCAACAAACAGTCCGAG GTGCTGCAGCTACAAAATGG 20 20 50.0 50.0 58.1 58.0 0.0 36.6 0.065198 121349 121824 1111-1111 0.500000 59.5 ndhI-ndhG_p2 ndhI-ndhG 2 TGGTCAACAAACAGTCCGAG CAAGAACCAGTCCCAACGAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.090102 121349 121824 1057-1057 0.500000 59.3 ndhI-ndhG_p3 ndhI-ndhG 3 AATCAAATTGCTTTGGGCCG GTGCTGCAGCTACAAAATGG 20 20 45.0 50.0 57.9 58.0 0.0 36.6 0.110982 121349 121824 732-732 0.500000 59.1 ndhI-ndhG_p4 ndhI-ndhG 4 TGGTCAACAAACAGTCCGAG AACGGTTCTGGCAAATCCAT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.128540 121349 121824 947-947 0.500000 59.0 ndhI-ndhG_p5 ndhI-ndhG 5 TGGTCAACAAACAGTCCGAG ATGGAACGGTTCTGGCAAAT 20 20 50.0 45.0 58.1 58.1 0.0 19.4 0.128540 121349 121824 951-951 0.500000 59.0 ndhG_p1 ndhG 1 GAGGGGAATGACATTGGTCC CAGTCCGATAGCTGCTTCAG 20 20 55.0 55.0 57.9 58.1 5.1 7.8 0.208216 121825 122355 1133-1133 0.500000 58.3 ndhG_p2 ndhG 2 AATCAAATTGCTTTGGGCCG CAGTCCGATAGCTGCTTCAG 20 20 45.0 55.0 57.9 58.1 0.0 7.8 0.247303 121825 122355 1519-1519 0.500000 58.0 ndhG_p3 ndhG 3 GAGGGGAATGACATTGGTCC TTTCGGCTCGTGATCAATCC 20 20 55.0 50.0 57.9 58.3 5.1 0.0 0.406605 121825 122355 976-976 0.500000 56.7 ndhG_p4 ndhG 4 TTTGGGCCGTTTACCAATGT CAGTCCGATAGCTGCTTCAG 20 20 45.0 55.0 58.3 58.1 0.0 7.8 0.443751 121825 122355 1508-1508 0.500000 56.4 ndhG_p5 ndhG 5 AATCAAATTGCTTTGGGCCG TTTCGGCTCGTGATCAATCC 20 20 45.0 50.0 57.9 58.3 0.0 0.0 0.445692 121825 122355 1362-1362 0.500000 56.4 psaC_p1 psaC 1 CTGAAGCAGCTATCGGACTG TCAGAAAAACCCGTGCTCAA 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.195185 123156 123401 717-717 0.500000 58.4 psaC_p2 psaC 2 CTGAAGCAGCTATCGGACTG GAACTTCCCGCAGTGTACAA 20 20 55.0 50.0 58.1 58.1 0.0 0.0 0.275926 123156 123401 1264-1264 0.500000 57.8 psaC_p3 psaC 3 CTGAAGCAGCTATCGGACTG CGCCACAGGATACGATTGAT 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.304477 123156 123401 1364-1364 0.500000 57.6 psaC_p4 psaC 4 CTGAAGCAGCTATCGGACTG AACCCCGTCAGTAAAATGGG 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.359313 123156 123401 1024-1024 0.500000 57.1 psaC_p5 psaC 5 CTGAAGCAGCTATCGGACTG CCCGGCTATTGGCAAAACTA 20 20 55.0 50.0 58.1 58.2 0.0 3.0 0.391941 123156 123401 791-791 0.500000 56.9 psaC-ccsA_p1 psaC-ccsA 1 AAACAACTCGAAGCATGGGT GAGGCGTGGGGATCATATTG 20 20 45.0 55.0 58.0 58.2 0.0 0.0 0.205230 123402 125283 2139-2139 0.500000 58.4 psaC-ccsA_p2 psaC-ccsA 2 AAACAACTCGAAGCATGGGT GCTTTGCTACTTCGGGTCTT 20 20 45.0 50.0 58.0 58.2 0.0 0.0 0.209060 123402 125283 2555-2555 0.500000 58.3 psaC-ccsA_p3 psaC-ccsA 3 AGATGTGAATCCGCTTGTCC GAGGCGTGGGGATCATATTG 20 20 50.0 55.0 58.0 58.2 0.0 0.0 0.216325 123402 125283 2197-2197 0.500000 58.3 psaC-ccsA_p4 psaC-ccsA 4 GGCATGAAACAACTCGAAGC GAGGCGTGGGGATCATATTG 20 20 50.0 55.0 58.0 58.2 0.0 0.0 0.217383 123402 125283 2145-2145 0.500000 58.3 psaC-ccsA_p5 psaC-ccsA 5 AGATGTGAATCCGCTTGTCC GCTTTGCTACTTCGGGTCTT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.220154 123402 125283 2613-2613 0.500000 58.2 ccsA_p1 ccsA 1 TTATCTCGACGAAATGGGCG GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.160012 125284 126255 1830-1830 0.500000 58.7 ccsA_p2 ccsA 2 TTATCTCGACGAAATGGGCG TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.161383 125284 126255 1829-1829 0.500000 58.7 ccsA_p3 ccsA 3 GATGGCTTCTCTTGCATTGC GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 57.8 58.0 0.5 0.0 0.213137 125284 126255 1761-1761 0.500000 58.3 ccsA_p4 ccsA 4 GATGGCTTCTCTTGCATTGC TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 57.8 58.0 0.5 0.0 0.214508 125284 126255 1760-1760 0.500000 58.3 ccsA_p5 ccsA 5 CGGGGCCGAGAGAATTATTT GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.263948 125284 126255 1537-1537 0.500000 57.9 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AGCGTGTCTACCGATTTCAC AAAAGCGCACTTCCGTATCA 20 20 50.0 45.0 58.0 58.2 0.0 11.5 0.204496 126431 127103 836-836 0.500000 58.4 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 AGCGTGTCTACCGATTTCAC AAAGCGCACTTCCGTATCAA 20 20 50.0 45.0 58.0 58.2 0.0 11.5 0.204496 126431 127103 835-835 0.500000 58.4 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCGTGTCTACCGATTTCAC AAGCGCACTTCCGTATCAAA 20 20 50.0 45.0 58.0 58.2 0.0 11.5 0.204496 126431 127103 834-834 0.500000 58.4 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 AGCGTGTCTACCGATTTCAC AGCGCACTTCCGTATCAAAA 20 20 50.0 45.0 58.0 58.2 0.0 11.5 0.204496 126431 127103 833-833 0.500000 58.4 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 CAGCGTGTCTACCGATTTCA AGCGCACTTCCGTATCAAAA 20 20 50.0 45.0 58.0 58.2 0.0 11.5 0.205867 126431 127103 834-834 0.500000 58.4 rpl32-ndhF_p1 rpl32-ndhF 1 TGACCTCAATGCAGGAATGG GCCCACATACGTCGAAGATT 20 20 50.0 50.0 57.9 58.1 5.9 5.1 0.197349 127251 127880 1280-1280 0.500000 58.4 rpl32-ndhF_p2 rpl32-ndhF 2 TGACCTCAATGCAGGAATGG AGGAAAAGCCCACATACGTC 20 20 50.0 50.0 57.9 57.9 5.9 0.0 0.242706 127251 127880 1287-1287 0.500000 58.1 rpl32-ndhF_p3 rpl32-ndhF 3 TGACCTCAATGCAGGAATGG ACATGAAGGGGGAATTGAGC 20 20 50.0 50.0 57.9 57.9 5.9 0.0 0.283254 127251 127880 1901-1901 0.500000 57.7 rpl32-ndhF_p4 rpl32-ndhF 4 TGACCTCAATGCAGGAATGG AAAAGCCCACATACGTCGAA 20 20 50.0 45.0 57.9 57.8 5.9 0.0 0.306133 127251 127880 1284-1284 0.500000 57.6 rpl32-ndhF_p5 rpl32-ndhF 5 TGACCTCAATGCAGGAATGG TAAACCGAAATCCCCCACAC 20 20 50.0 50.0 57.9 57.8 5.9 0.0 0.336752 127251 127880 1725-1725 0.500000 57.3 ndhF_p1 ndhF 1 GGTATTTGCCCATTTTGACT GAGCTCGGGTTATGCAAGAA 20 20 40.0 50.0 54.1 58.0 0.0 0.0 3.921496 127881 130106 2754-2754 0.500000 28.6 ndhF_p2 ndhF 2 GGTATTTGCCCATTTTGACT AGCTCGGGTTATGCAAGAAG 20 20 40.0 50.0 54.1 58.0 0.0 0.0 3.927158 127881 130106 2753-2753 0.500000 28.6 ndhF_p3 ndhF 3 GGTATTTGCCCATTTTGACT TGAATTCGGTCGTTGTGGTT 20 20 40.0 45.0 54.1 58.0 0.0 0.0 3.941023 127881 130106 2835-2835 0.500000 28.5 ndhF_p4 ndhF 4 GGTATTTGCCCATTTTGACT GCAAGAAGGGACCGAAAAGA 20 20 40.0 50.0 54.1 58.1 0.0 0.0 4.005111 127881 130106 2741-2741 0.500000 28.0 ndhF_p5 ndhF 5 GGTATTTGCCCATTTTGACT GGGCCCTCTTATCTCTTCCT 20 20 40.0 55.0 54.1 57.9 0.0 17.0 4.008073 127881 130106 2779-2779 0.500000 27.9