primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA-trnK-UUU_p1 psbA-trnK-UUU 1 ACGGTTTTCAGTGCTGGTTA ACTCCATCCGACTAGTTCCG 20 20 45.0 55.0 57.7 58.6 0.0 0.0 0.944750 1437 1929 547-661 1.000000 84.4 psbA-trnK-UUU_p2 psbA-trnK-UUU 2 GCTCTCGCGTCTCTCTAAAA ACTCCATCCGACTAGTTCCG 20 20 50.0 55.0 57.5 58.6 5.8 0.0 1.155630 1437 1929 496-610 1.000000 82.8 psbA-trnK-UUU_p3 psbA-trnK-UUU 3 ACGGTTTTCAGTGCTGGTTA ACTAGTTCCGGGTTCGAGTC 20 20 45.0 55.0 57.7 58.8 0.0 0.0 1.163141 1437 1929 537-651 1.000000 82.7 psbA-trnK-UUU_p4 psbA-trnK-UUU 4 ACGGTTTTCAGTGCTGGTTA GACTAGTTCCGGGTTCGAGT 20 20 45.0 55.0 57.7 58.8 0.0 0.0 1.163141 1437 1929 538-652 1.000000 82.7 psbA-trnK-UUU_p5 psbA-trnK-UUU 5 TACAGAAGCGACCCCATAGG ACTCCATCCGACTAGTTCCG 20 20 55.0 55.0 58.6 58.6 0.0 0.0 1.199430 1437 1929 521-635 1.000000 82.4 trnL-UAA-trnT-UGU_p1 trnL-UAA-trnT-UGU 1 TAGCGTCTACCAATTTCGCC GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.202173 13671 14868 784-1370 1.000000 90.4 trnL-UAA-trnT-UGU_p2 trnL-UAA-trnT-UGU 2 CGTTTCCATACCAAGGCTCA GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.240690 13671 14868 819-1405 1.000000 90.1 trnL-UAA-trnT-UGU_p3 trnL-UAA-trnT-UGU 3 ACGTTTCCATACCAAGGCTC GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.242165 13671 14868 820-1406 1.000000 90.1 trnL-UAA-trnT-UGU_p4 trnL-UAA-trnT-UGU 4 TAGCGTCTACCAATTTCGCC GGAATCGAACCGATGACCAT 20 20 50.0 50.0 58.1 57.8 0.0 15.5 0.309926 13671 14868 816-1402 1.000000 89.5 trnL-UAA-trnT-UGU_p5 trnL-UAA-trnT-UGU 5 CCCATTGTTAATTCCGGGGT GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 57.8 57.9 0.0 0.0 0.285774 13671 14868 1318-1405 0.925000 86.7 trnS-UGA-psbC_p1 trnS-UGA-psbC 1 CCGGTATAGTTCGCACCAAA CCGGTTCTTTCCATGACTCC 20 20 50.0 55.0 58.0 58.3 0.0 0.0 0.273870 25840 26079 313-329 1.000000 89.8 trnS-UGA-psbC_p2 trnS-UGA-psbC 2 AAACCGGTATAGTTCGCACC CCGGTTCTTTCCATGACTCC 20 20 50.0 55.0 58.0 58.3 8.0 0.0 0.275269 25840 26079 316-332 1.000000 89.8 trnS-UGA-psbC_p3 trnS-UGA-psbC 3 GAGAGATGGCTGAGTGGTTG CCGGTTCTTTCCATGACTCC 20 20 55.0 55.0 58.0 58.3 0.0 0.0 0.282288 25840 26079 352-368 1.000000 89.7 trnS-UGA-psbC_p4 trnS-UGA-psbC 4 GCTGAGTGGTTGATAGCTCC CCGGTTCTTTCCATGACTCC 20 20 55.0 55.0 58.1 58.3 0.0 0.0 0.314188 25840 26079 344-360 1.000000 89.5 trnS-UGA-psbC_p5 trnS-UGA-psbC 5 GGCTGAGTGGTTGATAGCTC CCGGTTCTTTCCATGACTCC 20 20 55.0 55.0 58.1 58.3 0.0 0.0 0.314188 25840 26079 345-361 1.000000 89.5 psbD-trnT-GGU_p1 psbD-trnT-GGU 1 CCCACAAAAACGAAACGGTC GTGGTAGAGTAACGCCATGG 20 20 50.0 55.0 58.2 58.1 0.0 7.6 0.233981 28511 29783 1221-1461 1.000000 90.1 psbD-trnT-GGU_p2 psbD-trnT-GGU 2 CACAAAAACGAAACGGTCCC GTGGTAGAGTAACGCCATGG 20 20 50.0 55.0 58.2 58.1 0.0 7.6 0.233981 28511 29783 1219-1459 0.950000 88.1 psbD-trnT-GGU_p3 psbD-trnT-GGU 3 CCACAAAAACGAAACGGTCC GTGGTAGAGTAACGCCATGG 20 20 50.0 55.0 58.2 58.1 0.0 7.6 0.233981 28511 29783 1220-1460 0.950000 88.1 psbD-trnT-GGU_p4 psbD-trnT-GGU 4 CACAAAAACGAAACGGTCCC TCAGTGGTAGAGTAACGCCA 20 20 50.0 50.0 58.2 58.1 0.0 0.0 0.256136 28511 29783 1222-1462 0.950000 88.0 psbD-trnT-GGU_p5 psbD-trnT-GGU 5 CCACAAAAACGAAACGGTCC TCAGTGGTAGAGTAACGCCA 20 20 50.0 50.0 58.2 58.1 0.0 0.0 0.256136 28511 29783 1223-1463 0.950000 88.0 petN-trnC-GCA_p1 petN-trnC-GCA 1 TTAAAGCAGCCCAAGCAAGA TTTCCCCAGTTCAAATCCGG 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.088172 33339 34331 1010-1093 1.000000 91.3 petN-trnC-GCA_p2 petN-trnC-GCA 2 TTAAAGCAGCCCAAGCAAGA GGGGGACTGCAAATCCTTTT 20 20 45.0 50.0 58.0 58.4 0.0 14.7 0.361535 33339 34331 1028-1111 1.000000 89.1 petN-trnC-GCA_p3 petN-trnC-GCA 3 GCCCAAGCAAGACTCACTAT TTTCCCCAGTTCAAATCCGG 20 20 50.0 50.0 57.6 58.1 0.0 0.0 0.492076 33339 34331 1002-1085 1.000000 88.1 petN-trnC-GCA_p4 petN-trnC-GCA 4 AGCCCAAGCAAGACTCACTA TTTCCCCAGTTCAAATCCGG 20 20 50.0 50.0 58.6 58.1 0.0 0.0 0.730045 33339 34331 1003-1086 1.000000 86.2 petN-trnC-GCA_p5 petN-trnC-GCA 5 GCCCAAGCAAGACTCACTAT GGGGGACTGCAAATCCTTTT 20 20 50.0 50.0 57.6 58.4 0.0 14.7 0.765439 33339 34331 1020-1103 1.000000 85.9 trnC-GCA-rpoB_p1 trnC-GCA-rpoB 1 CCGGATTTGAACTGGGGAAA GACATTCCCGCATTTTCACC 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.360154 34403 35286 900-1029 1.000000 89.1 trnC-GCA-rpoB_p2 trnC-GCA-rpoB 2 CCGGATTTGAACTGGGGAAA GCCCCGATCAATGAACCTAC 20 20 50.0 55.0 58.1 58.4 0.0 0.0 0.487797 34403 35286 961-1090 0.975000 87.1 trnC-GCA-rpoB_p3 trnC-GCA-rpoB 3 AAAAGGATTTGCAGTCCCCC GACATTCCCGCATTTTCACC 20 20 50.0 50.0 58.4 57.7 14.6 0.0 0.633517 34403 35286 882-1011 1.000000 86.9 trnC-GCA-rpoB_p4 trnC-GCA-rpoB 4 CCGGATTTGAACTGGGGAAA TAAGCCCCGATCAATGAACC 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.423974 34403 35286 964-1093 0.950000 86.6 trnC-GCA-rpoB_p5 trnC-GCA-rpoB 5 CCGGATTTGAACTGGGGAAA AGCCCCGATCAATGAACCTA 20 20 50.0 50.0 58.1 58.5 0.0 0.0 0.574988 34403 35286 962-1091 0.975000 86.4 trnR-UCU-trnG-UCC_p1 trnR-UCU-trnG-UCC 1 TGCACATAATTTGCGTCCAA AGCCTTCCAAGCTAACGATG 20 20 40.0 50.0 56.6 58.0 0.0 0.0 1.412752 52319 52759 523-645 1.000000 80.7 trnR-UCU-trnG-UCC_p2 trnR-UCU-trnG-UCC 2 TGCACATAATTTGCGTCCAA CCTAGCCTTCCAAGCTAACG 20 20 40.0 55.0 56.6 58.1 0.0 0.0 1.441588 52319 52759 526-648 1.000000 80.5 trnR-UCU-trnG-UCC_p3 trnR-UCU-trnG-UCC 3 ATGCACATAATTTGCGTCCA AGCCTTCCAAGCTAACGATG 20 20 40.0 50.0 56.4 58.0 0.0 0.0 1.641067 52319 52759 524-646 1.000000 78.9 trnR-UCU-trnG-UCC_p4 trnR-UCU-trnG-UCC 4 ATGCACATAATTTGCGTCCA CCTAGCCTTCCAAGCTAACG 20 20 40.0 55.0 56.4 58.1 0.0 0.0 1.669904 52319 52759 527-649 1.000000 78.6 trnR-UCU-trnG-UCC_p5 trnR-UCU-trnG-UCC 5 TGCACATAATTTGCGTCCAA CCCTAGCCTTCCAAGCTAAC 20 20 40.0 55.0 56.6 57.7 0.0 0.0 1.716602 52319 52759 527-649 1.000000 78.3 trnQ-UUG-rps16_p1 trnQ-UUG-rps16 1 GAATCAAAAATGGGGCGTGG GTCTTTCAAGTCGCACGTTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.013940 55633 56063 557-608 1.000000 91.9 trnQ-UUG-rps16_p2 trnQ-UUG-rps16 2 GAGGTTCGAATCCTTCCGTC GTCTTTCAAGTCGCACGTTG 20 20 55.0 50.0 58.1 58.0 16.9 0.0 0.081289 55633 56063 499-550 1.000000 91.3 trnQ-UUG-rps16_p3 trnQ-UUG-rps16 3 GTCGAATCAAAAATGGGGCG GTCTTTCAAGTCGCACGTTG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.097123 55633 56063 560-611 1.000000 91.2 trnQ-UUG-rps16_p4 trnQ-UUG-rps16 4 GAATCAAAAATGGGGCGTGG ATGTCTTTCAAGTCGCACGT 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.142887 55633 56063 559-610 1.000000 90.9 trnQ-UUG-rps16_p5 trnQ-UUG-rps16 5 GAATCAAAAATGGGGCGTGG GCACGTTGCTTTTTACCACA 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.205047 55633 56063 545-596 1.000000 90.4 rps16_p1 rps16 1 ACCGGATCCAAACTAAAGGA AAGTCATCCACACCCTCCTT 20 20 45.0 50.0 56.1 58.3 9.5 0.0 2.111757 56064 57232 1201-1253 0.950000 73.1 rps16_p2 rps16 2 ACCGGATCCAAACTAAAGGA AGTCATCCACACCCTCCTTT 20 20 45.0 50.0 56.1 58.3 9.5 0.0 2.111757 56064 57232 1200-1252 0.950000 73.1 rps16_p3 rps16 3 ACCGGATCCAAACTAAAGGA GTCATCCACACCCTCCTTTT 20 20 45.0 50.0 56.1 57.4 9.5 0.0 2.445850 56064 57232 1199-1251 0.975000 71.4 rps16_p4 rps16 4 ACCGGATCCAAACTAAAGGAA AAGTCATCCACACCCTCCTT 21 20 42.9 50.0 56.9 58.3 9.5 0.0 2.334715 56064 57232 1201-1253 0.950000 71.3 rps16_p5 rps16 5 ACCGGATCCAAACTAAAGGAA AGTCATCCACACCCTCCTTT 21 20 42.9 50.0 56.9 58.3 9.5 0.0 2.334715 56064 57232 1200-1252 0.950000 71.3 rps16-accD_p1 rps16-accD 1 GGTGCTCAACCTACAGGAAC AGAATTGAACCACCATTTTTCCA 20 23 55.0 34.8 58.2 57.1 1.3 0.0 4.075765 57233 57939 556-850 0.975000 58.4 rps16-accD_p2 rps16-accD 2 GGTGCTCAACCTACAGGAAC ACAACATAGAATTGAACCACCA 20 22 55.0 36.4 58.2 55.9 1.3 0.0 4.288790 57233 57939 563-857 0.975000 56.7 rps16-accD_p3 rps16-accD 3 TTTCCTTGAACAGGGTGCTC AGAATTGAACCACCATTTTTCCA 20 23 50.0 34.8 58.0 57.1 3.1 0.0 3.904192 57233 57939 837-837 0.025000 9.8 rps16-accD_p4 rps16-accD 4 TTTCCTTGAACAGGGTGCTC ACAACATAGAATTGAACCACCA 20 22 50.0 36.4 58.0 55.9 3.1 0.0 4.117218 57233 57939 844-844 0.025000 8.1 rps16-accD_p5 rps16-accD 5 TTTCCTTGAACAGGGTGCTC GAATTGAACCACCATTTTTCCA 20 22 50.0 36.4 58.0 55.7 3.1 0.0 4.331246 57233 57939 836-836 0.025000 6.4 accD-psaI_p1 accD-psaI 1 TTGATTCAATCGTACCGCGT CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 58.0 58.0 4.9 26.9 0.027955 59446 59932 492-697 1.000000 91.8 accD-psaI_p2 accD-psaI 2 TGCTTACATTGCATTTGCGG CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 58.0 58.0 0.0 26.9 0.033461 59446 59932 596-801 1.000000 91.7 accD-psaI_p3 accD-psaI 3 TTGATTCAATCGTACCGCGT TTTCCAGGAAATCCCCAACG 20 20 45.0 50.0 58.0 58.1 4.9 10.9 0.083080 59446 59932 1058-1263 1.000000 91.3 accD-psaI_p4 accD-psaI 4 AAGGTTCACAAGCAGCTGAA CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 57.9 58.0 20.4 26.9 0.084141 59446 59932 534-739 1.000000 91.3 accD-psaI_p5 accD-psaI 5 TTGATTCAATCGTACCGCGT CCAGGAAATCCCCAACGAAA 20 20 45.0 50.0 58.0 58.1 4.9 0.0 0.083080 59446 59932 1055-1260 0.975000 90.3 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 CGGTCTCAATTGATCCCCTG TTTACCCTTGGCCATGAACC 20 20 55.0 50.0 58.0 58.1 9.0 19.8 0.109323 66824 67546 1460-1544 0.925000 88.1 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CGGTCTCAATTGATCCCCTG CTTGGCCATGAACCTCCTTT 20 20 55.0 50.0 58.0 58.1 9.0 13.3 0.112090 66824 67546 1454-1538 0.925000 88.1 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 TGATCCCCTGTTACTGCTCA TCACCGAGTCCAAATACCCT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.101806 66824 67546 1121-1175 0.450000 68.3 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 GCGTTCTACCGAACTGAACT TCACCGAGTCCAAATACCCT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.114755 66824 67546 1250-1305 0.450000 68.1 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 CGGTCTCAATTGATCCCCTG TCACCGAGTCCAAATACCCT 20 20 55.0 50.0 58.0 58.1 9.0 0.0 0.093974 66824 67546 1131-1185 0.375000 65.2 rps8-rpl14_p1 rps8-rpl14 1 TTATGTCAGCGATGGTGTCC AGAATTTTTGGCGCAATCCC 20 20 50.0 45.0 57.7 57.6 0.0 10.8 0.694541 81745 82088 393-494 1.000000 86.4 rps8-rpl14_p2 rps8-rpl14 2 GTCAGCGATGGTGTCCTTAC AGAATTTTTGGCGCAATCCC 20 20 55.0 45.0 58.4 57.6 0.0 10.8 0.743436 81745 82088 389-490 1.000000 86.1 rps8-rpl14_p3 rps8-rpl14 3 TATGTCAGCGATGGTGTCCT AGAATTTTTGGCGCAATCCC 20 20 50.0 45.0 58.5 57.6 0.0 10.8 0.899889 81745 82088 392-493 1.000000 84.8 rps8-rpl14_p4 rps8-rpl14 4 TTATGTCAGCGATGGTGTCC GAATTTTTGGCGCAATCCCC 20 20 50.0 50.0 57.7 58.6 0.0 10.8 0.940886 81745 82088 392-493 0.925000 81.5 rps8-rpl14_p5 rps8-rpl14 5 GTCAGCGATGGTGTCCTTAC GAATTTTTGGCGCAATCCCC 20 20 55.0 50.0 58.4 58.6 0.0 10.8 0.989782 81745 82088 388-489 0.925000 81.1 ndhF-rpl32_p1 ndhF-rpl32 1 TGATCCATGAAGATTGATGTGT GTGCGTTTCTTTGGAACTGC 22 20 36.4 50.0 55.5 58.5 0.0 0.0 5.023265 113422 114162 685-797 1.000000 52.0 ndhF-rpl32_p2 ndhF-rpl32 2 ATGATCCATGAAGATTGATGTGT GTGCGTTTCTTTGGAACTGC 23 20 34.8 50.0 56.0 58.5 0.0 0.0 5.492938 113422 114162 686-798 1.000000 52.0 ndhF-rpl32_p3 ndhF-rpl32 3 AGGTATGATCCATGAAGATTGATGT GTGCGTTTCTTTGGAACTGC 25 20 36.0 50.0 57.9 58.5 0.0 0.0 5.610790 113422 114162 690-802 1.000000 52.0 ndhF-rpl32_p4 ndhF-rpl32 4 TGATCCATGAAGATTGATGTGT AGTGCGTTTCTTTGGAACTG 22 20 36.4 45.0 55.5 56.9 0.0 0.0 5.635523 113422 114162 686-798 1.000000 52.0 ndhF-rpl32_p5 ndhF-rpl32 5 GGTATGATCCATGAAGATTGATGTG GTGCGTTTCTTTGGAACTGC 25 20 40.0 50.0 57.9 58.5 0.0 0.0 5.665202 113422 114162 689-801 1.000000 52.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ACAGGGAATTCAAAAAGTTTT TCCTAAGAGCAGCGTGTCTA 21 20 28.6 50.0 52.3 57.9 7.9 0.0 6.873103 114310 115365 302-1164 1.000000 52.0 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 ACAGGGAATTCAAAAAGTTTT AGCAGCGTGTCTACCAATTT 21 20 28.6 45.0 52.3 57.8 7.9 0.0 6.933830 114310 115365 299-1157 1.000000 52.0 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 ACAGGGAATTCAAAAAGTTTT CCTAAGAGCAGCGTGTCTAC 21 20 28.6 55.0 52.3 57.8 7.9 0.0 6.945121 114310 115365 303-1163 1.000000 52.0 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 ACAGGGAATTCAAAAAGTTTT CTAAGAGCAGCGTGTCTACC 21 20 28.6 55.0 52.3 57.8 7.9 0.0 6.945121 114310 115365 303-1162 1.000000 52.0 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ACAGGGAATTCAAAAAGTTTTT TCCTAAGAGCAGCGTGTCTA 22 20 27.3 50.0 53.2 57.9 7.8 0.0 6.955480 114310 115365 302-1164 1.000000 52.0 ndhG-ndhI_p1 ndhG-ndhI 1 CAACCAAGAACCAGTCCCAA GCGGGAACTGTGTTGAGTAT 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.160661 120028 120781 862-1180 1.000000 90.7 ndhG-ndhI_p2 ndhG-ndhI 2 CAACCAAGAACCAGTCCCAA TGGTCAACAAACAGTCCGAG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.117794 120028 120781 1149-1467 0.975000 90.1 ndhG-ndhI_p3 ndhG-ndhI 3 CCCCAACGGTCAAAAGATGA GCGGGAACTGTGTTGAGTAT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.190475 120028 120781 1017-1335 0.900000 86.5 ndhG-ndhI_p4 ndhG-ndhI 4 CCCCAACGGTCAAAAGATGA TGGTCAACAAACAGTCCGAG 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.147609 120028 120781 1304-1622 0.875000 85.8 ndhG-ndhI_p5 ndhG-ndhI 5 TTGCACCTATCAAAGCAGCT TGGTCAACAAACAGTCCGAG 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.256918 120028 120781 1569-1843 0.850000 83.9 ycf1_p1 ycf1 1 CCCAGGCCTCTCCTATTTCT GAAGCGTCCGTTGCGATATA 20 20 55.0 50.0 58.2 58.2 0.0 0.0 0.424478 129386 129505 1289-1331 0.975000 86.7 ycf1_p2 ycf1 2 TCCCAGGCCTCTCCTATTTC GAAGCGTCCGTTGCGATATA 20 20 55.0 50.0 58.2 58.2 0.0 0.0 0.429767 129386 129505 1290-1332 0.975000 86.7 ycf1_p3 ycf1 3 CGCCTTTGAGCACGTATAGA GAAGCGTCCGTTGCGATATA 20 20 50.0 50.0 57.8 58.2 0.0 0.0 0.441381 129386 129505 1044-1062 0.975000 84.8 ycf1_p4 ycf1 4 TCCCCCTCCTCACTTTCTTT GAAGCGTCCGTTGCGATATA 20 20 50.0 50.0 57.9 58.2 0.0 0.0 0.371439 129386 129505 1254-1272 0.850000 80.2 ycf1_p5 ycf1 5 TCCCCCTCCTCACTTTCTTT AAGCGTCCGTTGCGATATAT 20 20 50.0 45.0 57.9 57.6 0.0 0.0 0.567726 129386 129505 1253-1271 0.875000 79.6