feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 202 275 -1 74 LSC 0.000000 0 0 69 62 no 0.000000 1 0.000000 NA 1.000000 23.400000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 276 400 0 125 LSC 0.016000 2 0 143 300 no 1.000000 2 1.000000 NA 1.000000 57.400000 psbA gene psbA psbA 401 1462 -1 1062 LSC 0.005650 6 0 61 23 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1463 1737 0 275 LSC 0.022305 6 6 7 58 no 1.000000 2 1.000000 NA 0.978182 52.900000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1738 1766 -1 29 LSC 0.000000 0 0 10 29 no 0.000000 1 0.000000 NA 1.000000 19.500000 matK gene matK matK 2029 3537 -1 1509 LSC 0.005964 9 0 65 41 no 1.000000 2 1.000000 NA 1.000000 50.200000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3538 4271 0 734 LSC 0.009537 7 0 217 57 no 1.000000 2 1.000000 NA 1.000000 53.500000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4272 4308 -1 37 LSC 0.000000 0 0 300 20 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4309 4966 0 658 LSC 0.009132 6 1 300 16 no 1.000000 2 1.000000 NA 0.998480 50.300000 rps16 gene rps16 rps16 4967 6139 -1 1173 LSC 0.005973 7 1 202 180 no 1.000000 2 1.000000 NA 0.999147 60.800000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6140 8124 0 1985 LSC 0.013790 27 27 58 147 no 1.000000 2 1.000000 NA 0.986398 56.300000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 8125 8196 -1 72 LSC 0.000000 0 0 27 75 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 8197 8546 0 350 LSC 0.002857 1 0 99 21 no 1.000000 2 1.000000 NA 1.000000 41.800000 psbK gene psbK psbK 8547 8732 1 186 LSC 0.005376 1 0 274 107 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_009 igs psbK|trnS-GCU psbK-trnS-GCU 8733 9408 0 676 LSC 0.007396 5 0 164 33 no 1.000000 2 1.000000 NA 1.000000 50.500000 trnS-GCU tRNA trnS-GCU trnS-GCU 9409 9496 -1 88 LSC 0.011364 1 0 17 82 no 1.000000 2 1.000000 NA 1.000000 45.300000 IGS_010 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 9497 11366 0 1870 LSC 0.012862 24 4 54 27 yes 1.000000 2 1.000000 NA 0.997861 52.600000 trnR-UCU tRNA trnR-UCU trnR-UCU 11367 11438 1 72 LSC 0.013889 1 0 31 59 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_011 igs trnR-UCU|atpA trnR-UCU-atpA 11439 11626 0 188 LSC 0.049451 9 6 44 108 yes 1.000000 2 1.000000 NA 0.968085 72.100000 atpA gene atpA atpA 11627 13144 -1 1518 LSC 0.002635 4 0 8 295 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_012 igs atpA|atpF atpA-atpF 13145 13204 0 60 LSC 0.000000 0 0 300 235 no 0.000000 1 0.000000 NA 1.000000 33.800000 atpF gene atpF atpF 13205 14515 -1 1311 LSC 0.004577 6 0 300 97 no 1.000000 2 1.000000 NA 1.000000 53.700000 IGS_013 igs atpF|atpI atpF-atpI 14516 16130 0 1615 LSC 0.008685 14 3 113 70 no 1.000000 2 1.000000 NA 0.998142 53.900000 atpI gene atpI atpI 16131 16874 -1 744 LSC 0.005376 4 0 41 74 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_014 igs atpI|rps2 atpI-rps2 16875 17091 0 217 LSC 0.009259 2 1 158 164 no 1.000000 2 1.000000 NA 0.995392 55.100000 rps2 gene rps2 rps2 17092 17802 -1 711 LSC 0.004219 3 0 50 175 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_015 igs rps2|rpoC2 rps2-rpoC2 17803 18011 0 209 LSC 0.004785 1 0 110 140 no 1.000000 2 1.000000 NA 1.000000 48.500000 rpoC2 gene rpoC2 rpoC2 18012 22202 -1 4191 LSC 0.006452 27 6 33 114 no 1.000000 2 1.000000 NA 0.998568 45.100000 IGS_016 igs rpoC2|rpoC1 rpoC2-rpoC1 22203 22367 0 165 LSC 0.006061 1 0 27 300 no 1.000000 2 1.000000 NA 1.000000 43.000000 rpoC1 gene rpoC1 rpoC1 22368 25192 -1 2825 LSC 0.001416 4 0 50 300 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_017 igs rpoC1|rpoB rpoC1-rpoB 25193 25223 0 31 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoB gene rpoB rpoB 25224 28436 -1 3213 LSC 0.005602 18 0 300 204 no 1.000000 2 1.000000 NA 1.000000 58.500000 IGS_018 igs rpoB|trnC-GCA rpoB-trnC-GCA 28437 29684 0 1248 LSC 0.005312 4 495 93 160 no 1.000000 2 1.000000 NA 0.603365 48.600000 trnC-GCA tRNA trnC-GCA trnC-GCA 29685 29755 1 71 LSC 0.000000 0 0 300 89 no 0.000000 1 0.000000 NA 1.000000 25.400000 IGS_019 igs trnC-GCA|petN trnC-GCA-petN 29756 30598 0 843 LSC 0.009490 8 0 300 74 no 1.000000 2 1.000000 NA 1.000000 54.800000 petN gene petN petN 30599 30688 1 90 LSC 0.011111 1 0 73 5 no 1.000000 2 1.000000 NA 1.000000 44.300000 IGS_020 igs petN|psbM petN-psbM 30689 31772 0 1084 LSC 0.013850 15 1 15 119 no 1.000000 2 1.000000 NA 0.999077 52.900000 psbM gene psbM psbM 31773 31877 -1 105 LSC 0.000000 0 0 10 14 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_021 igs psbM|trnD-GUC psbM-trnD-GUC 31878 33000 0 1123 LSC 0.015179 17 3 115 194 no 1.000000 2 1.000000 NA 0.997329 61.400000 trnD-GUC tRNA trnD-GUC trnD-GUC 33001 33074 -1 74 LSC 0.000000 0 0 73 120 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_022 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 33075 33466 0 392 LSC 0.005277 2 13 147 124 no 1.000000 2 1.000000 NA 0.966837 54.900000 trnY-GUA tRNA trnY-GUA trnY-GUA 33467 33550 -1 84 LSC 0.000000 0 0 189 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_023 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 33551 33596 0 46 LSC 0.021739 1 0 273 300 yes 1.000000 2 1.000000 NA 1.000000 65.000000 trnE-UUC tRNA trnE-UUC trnE-UUC 33597 33669 -1 73 LSC 0.000000 0 0 5 300 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_024 igs trnE-UUC|psbD trnE-UUC-psbD 33670 35668 0 1999 LSC 0.007704 15 52 78 300 no 1.000000 2 1.000000 NA 0.973987 55.500000 psbD gene psbD psbD 35669 36730 1 1062 LSC 0.002825 3 0 287 45 no 1.000000 2 1.000000 NA 1.000000 48.700000 psbC gene psbC psbC 36678 38099 1 1422 LSC 0.002813 4 0 94 12 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_026 igs psbC|trnS-UGA psbC-trnS-UGA 38100 38365 0 266 LSC 0.061776 16 7 300 280 yes 1.000000 2 1.000000 NA 0.973684 85.100000 trnS-UGA tRNA trnS-UGA trnS-UGA 38366 38458 -1 93 LSC 0.000000 0 0 81 187 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_027 igs trnS-UGA|psbZ trnS-UGA-psbZ 38459 38831 0 373 LSC 0.002717 1 5 174 162 no 1.000000 2 1.000000 NA 0.986595 54.000000 psbZ gene psbZ psbZ 38832 39020 1 189 LSC 0.010582 2 0 185 31 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_028 igs psbZ|trnfM-CAU psbZ-trnfM-CAU 39021 39821 0 801 LSC 0.019108 15 16 15 155 yes 1.000000 2 1.000000 NA 0.980025 57.700000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 39822 39895 -1 74 LSC 0.000000 0 0 44 81 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_029 igs trnfM-CAU|rps14 trnfM-CAU-rps14 39896 40062 0 167 LSC 0.011976 2 0 118 24 no 1.000000 2 1.000000 NA 1.000000 46.200000 rps14 gene rps14 rps14 40063 40365 -1 303 LSC 0.003300 1 0 20 23 no 1.000000 2 1.000000 NA 1.000000 41.000000 IGS_030 igs rps14|psaB rps14-psaB 40366 40496 0 131 LSC 0.022901 3 0 278 300 yes 1.000000 2 1.000000 NA 1.000000 65.700000 psaB gene psaB psaB 40497 42701 -1 2205 LSC 0.000907 2 0 23 300 no 1.000000 2 1.000000 NA 1.000000 44.500000 IGS_031 igs psaB|psaA psaB-psaA 42702 42726 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 42727 44979 -1 2253 LSC 0.002663 6 0 300 91 no 1.000000 2 1.000000 NA 1.000000 50.500000 IGS_032 igs psaA|ycf3 psaA-ycf3 44980 45701 0 722 LSC 0.008380 6 6 300 300 yes 1.000000 2 1.000000 NA 0.991690 64.400000 ycf3 gene ycf3 ycf3 45702 47651 -1 1950 LSC 0.004630 9 6 172 267 no 1.000000 2 1.000000 NA 0.996923 58.700000 IGS_033 igs ycf3|trnS-GGA ycf3-trnS-GGA 47652 48611 0 960 LSC 0.010616 10 18 127 101 no 1.000000 2 1.000000 NA 0.981250 59.200000 trnS-GGA tRNA trnS-GGA trnS-GGA 48612 48698 1 87 LSC 0.000000 0 0 197 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_034 igs trnS-GGA|rps4 trnS-GGA-rps4 48699 48979 0 281 LSC 0.021352 6 0 284 24 no 1.000000 2 1.000000 NA 1.000000 51.600000 rps4 gene rps4 rps4 48980 49585 -1 606 LSC 0.006601 4 0 24 71 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_035 igs rps4|trnT-UGU rps4-trnT-UGU 49586 49911 0 326 LSC 0.003067 1 0 300 201 no 1.000000 2 1.000000 NA 1.000000 54.800000 trnT-UGU tRNA trnT-UGU trnT-UGU 49912 49984 -1 73 LSC 0.000000 0 0 254 128 no 0.000000 1 0.000000 NA 1.000000 28.300000 IGS_036 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 49985 50972 0 988 LSC 0.009444 9 35 300 186 yes 1.000000 2 1.000000 NA 0.964575 66.500000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 50973 51009 1 37 LSC 0.000000 0 0 72 149 no 0.000000 1 0.000000 NA 1.000000 24.100000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 51509 51558 1 50 LSC 0.000000 0 0 95 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_039 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 51559 51811 0 253 LSC 0.007905 2 0 145 166 no 1.000000 2 1.000000 NA 1.000000 52.900000 trnF-GAA tRNA trnF-GAA trnF-GAA 51812 51884 1 73 LSC 0.000000 0 0 3 93 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_040 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 51885 52601 0 717 LSC 0.014265 10 16 76 300 no 1.000000 2 1.000000 NA 0.977685 59.800000 ndhJ gene ndhJ ndhJ 52602 53078 -1 477 LSC 0.000000 0 0 94 5 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_041 igs ndhJ|ndhK ndhJ-ndhK 53079 53167 0 89 LSC 0.022472 2 0 300 89 no 1.000000 2 1.000000 NA 1.000000 57.100000 ndhK gene ndhK ndhK 53168 54025 -1 858 LSC 0.004662 4 0 24 200 no 1.000000 2 1.000000 NA 1.000000 48.200000 ndhC gene ndhC ndhC 53905 54267 -1 363 LSC 0.005510 2 0 292 21 no 1.000000 2 1.000000 NA 1.000000 43.600000 IGS_043 igs ndhC|trnV-UAC ndhC-trnV-UAC 54268 55282 0 1015 LSC 0.007000 7 15 41 74 no 1.000000 2 1.000000 NA 0.985222 52.300000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 55283 55319 -1 37 LSC 0.000000 0 0 35 37 no 0.000000 1 0.000000 NA 1.000000 21.400000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 55912 55950 -1 39 LSC 0.000000 0 0 232 298 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_046 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 55951 56123 0 173 LSC 0.000000 0 0 271 125 no 0.000000 1 0.000000 NA 1.000000 28.100000 trnM-CAU tRNA trnM-CAU trnM-CAU 56124 56196 1 73 LSC 0.000000 0 0 300 52 no 0.000000 1 0.000000 NA 1.000000 22.700000 IGS_047 igs trnM-CAU|atpE trnM-CAU-atpE 56197 56426 0 230 LSC 0.004425 1 4 300 112 no 1.000000 2 1.000000 NA 0.982609 50.100000 atpE gene atpE atpE 56427 56828 -1 402 LSC 0.002488 1 0 177 80 no 1.000000 2 1.000000 NA 1.000000 47.100000 atpB gene atpB atpB 56825 58327 -1 1503 LSC 0.002661 4 0 285 156 no 1.000000 2 1.000000 NA 1.000000 57.000000 IGS_049 igs atpB|rbcL atpB-rbcL 58328 59111 0 784 LSC 0.008929 7 0 36 61 no 1.000000 2 1.000000 NA 1.000000 51.600000 rbcL gene rbcL rbcL 59112 60539 1 1428 LSC 0.010504 15 0 90 6 no 1.000000 2 1.000000 NA 1.000000 50.200000 IGS_050 igs rbcL|accD rbcL-accD 60540 61136 0 597 LSC 0.006700 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 62.500000 accD gene accD accD 61137 62672 1 1536 LSC 0.004557 7 0 11 50 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_051 igs accD|psaI accD-psaI 62673 63372 0 700 LSC 0.014599 10 15 165 285 yes 1.000000 2 1.000000 NA 0.978571 66.600000 psaI gene psaI psaI 63373 63483 1 111 LSC 0.000000 0 0 74 174 no 0.000000 1 0.000000 NA 1.000000 24.300000 IGS_052 igs psaI|ycf4 psaI-ycf4 63484 63909 0 426 LSC 0.004695 2 0 185 54 no 1.000000 2 1.000000 NA 1.000000 46.900000 ycf4 gene ycf4 ycf4 63910 64470 1 561 LSC 0.007130 4 0 156 110 no 1.000000 2 1.000000 NA 1.000000 55.300000 IGS_053 igs ycf4|cemA ycf4-cemA 64471 65358 0 888 LSC 0.007919 7 4 139 4 no 1.000000 2 1.000000 NA 0.995495 49.000000 cemA gene cemA cemA 65359 66048 1 690 LSC 0.002899 2 0 197 10 no 1.000000 2 1.000000 NA 1.000000 46.200000 IGS_054 igs cemA|petA cemA-petA 66049 66275 0 227 LSC 0.008811 2 0 300 87 no 1.000000 2 1.000000 NA 1.000000 49.100000 petA gene petA petA 66276 67238 1 963 LSC 0.004154 4 0 124 81 no 1.000000 2 1.000000 NA 1.000000 52.200000 IGS_055 igs petA|psbJ petA-psbJ 67239 67514 0 276 LSC 0.003984 1 25 300 222 no 1.000000 2 1.000000 NA 0.909420 58.400000 psbJ gene psbJ psbJ 67515 67637 -1 123 LSC 0.000000 0 0 194 99 no 0.000000 1 0.000000 NA 1.000000 26.200000 IGS_056 igs psbJ|psbF psbJ-psbF 67638 67923 0 286 LSC 0.006993 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 psbF gene psbF psbF 67924 68043 -1 120 LSC 0.000000 0 0 179 300 no 0.000000 1 0.000000 NA 1.000000 32.200000 IGS_057 igs psbF|psbE psbF-psbE 68044 68052 0 9 LSC 0.000000 0 0 299 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 68053 68304 -1 252 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_058 igs psbE|petL psbE-petL 68305 69594 0 1290 LSC 0.008696 11 25 300 237 yes 1.000000 2 1.000000 NA 0.980620 65.600000 petL gene petL petL 69595 69690 1 96 LSC 0.000000 0 0 91 141 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_059 igs petL|petG petL-petG 69691 69865 0 175 LSC 0.011429 2 0 187 300 no 1.000000 2 1.000000 NA 1.000000 58.100000 petG gene petG petG 69866 69979 1 114 LSC 0.000000 0 0 23 300 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_060 igs petG|trnW-CCA petG-trnW-CCA 69980 70109 0 130 LSC 0.000000 0 0 137 300 no 0.000000 1 0.000000 NA 1.000000 29.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 70110 70183 -1 74 LSC 0.000000 0 0 267 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_061 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 70184 70347 0 164 LSC 0.000000 0 0 300 136 no 0.000000 1 0.000000 NA 1.000000 28.900000 trnP-UGG tRNA trnP-UGG trnP-UGG 70348 70420 -1 73 LSC 0.000000 0 0 300 63 no 0.000000 1 0.000000 NA 1.000000 23.500000 IGS_062 igs trnP-UGG|psaJ trnP-UGG-psaJ 70421 70820 0 400 LSC 0.015228 6 6 300 75 no 1.000000 2 1.000000 NA 0.985000 55.400000 psaJ gene psaJ psaJ 70821 70952 1 132 LSC 0.015152 2 0 3 87 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_063 igs psaJ|rpl33 psaJ-rpl33 70953 71423 0 471 LSC 0.008511 4 1 5 49 no 1.000000 2 1.000000 NA 0.997877 46.500000 rpl33 gene rpl33 rpl33 71424 71624 1 201 LSC 0.004975 1 0 229 300 no 1.000000 2 1.000000 NA 1.000000 55.400000 IGS_064 igs rpl33|rps18 rpl33-rps18 71625 71832 0 208 LSC 0.000000 0 3 151 182 no 1.000000 2 1.000000 NA 0.985577 50.200000 rps18 gene rps18 rps18 71833 72138 1 306 LSC 0.003268 1 0 300 90 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_065 igs rps18|rpl20 rps18-rpl20 72139 72409 0 271 LSC 0.011321 3 6 123 300 no 1.000000 2 1.000000 NA 0.977860 55.300000 rpl20 gene rpl20 rpl20 72410 72763 -1 354 LSC 0.000000 0 0 18 174 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_066 igs rpl20|rps12 rpl20-rps12 72764 73565 0 802 LSC 0.005109 4 19 300 193 yes 1.000000 2 1.000000 NA 0.976309 63.400000 rps12_part1 gene rps12 rps12 73566 73679 -1 114 LSC 0.000000 0 0 42 79 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_067 igs rps12|clpP rps12-clpP 73680 73821 0 142 LSC 0.014085 2 0 156 296 no 1.000000 2 1.000000 NA 1.000000 57.300000 clpP gene clpP clpP 73822 75873 -1 2052 LSC 0.004401 9 7 27 210 no 1.000000 2 1.000000 NA 0.996589 47.500000 IGS_068 igs clpP|psbB clpP-psbB 75874 76329 0 456 LSC 0.004515 2 13 213 300 no 1.000000 2 1.000000 NA 0.971491 61.100000 psbB gene psbB psbB 76330 77856 1 1527 LSC 0.002620 4 0 9 30 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_069 igs psbB|psbT psbB-psbT 77857 78032 0 176 LSC 0.011364 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.000000 psbT gene psbT psbT 78033 78140 1 108 LSC 0.000000 0 0 10 300 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_070 igs psbT|psbN psbT-psbN 78141 78198 0 58 LSC 0.000000 0 0 118 300 no 0.000000 1 0.000000 NA 1.000000 27.600000 psbN gene psbN psbN 78199 78330 -1 132 LSC 0.000000 0 0 176 254 no 0.000000 1 0.000000 NA 1.000000 31.900000 IGS_071 igs psbN|psbH psbN-psbH 78331 78414 0 84 LSC 0.000000 0 0 300 170 no 0.000000 1 0.000000 NA 1.000000 31.500000 psbH gene psbH psbH 78415 78654 1 240 LSC 0.008333 2 0 300 127 no 1.000000 2 1.000000 NA 1.000000 51.800000 IGS_072 igs psbH|petD psbH-petD 78655 80962 0 2308 LSC 0.005633 13 0 57 200 no 1.000000 2 1.000000 NA 1.000000 49.600000 petD gene petD petD 80963 81487 1 525 LSC 0.003810 2 0 170 73 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_073 igs petD|rpoA petD-rpoA 81488 81692 0 205 LSC 0.014634 3 0 210 259 no 1.000000 2 1.000000 NA 1.000000 60.900000 rpoA gene rpoA rpoA 81693 82691 -1 999 LSC 0.009036 9 3 25 300 no 1.000000 2 1.000000 NA 0.996997 51.100000 IGS_074 igs rpoA|rps11 rpoA-rps11 82692 82771 0 80 LSC 0.000000 0 0 26 300 no 0.000000 1 0.000000 NA 1.000000 20.700000 rps11 gene rps11 rps11 82772 83188 -1 417 LSC 0.000000 0 0 106 260 no 0.000000 1 0.000000 NA 1.000000 29.100000 IGS_075 igs rps11|rpl36 rps11-rpl36 83189 83302 0 114 LSC 0.000000 0 0 300 146 no 0.000000 1 0.000000 NA 1.000000 29.700000 rpl36 gene rpl36 rpl36 83303 83416 -1 114 LSC 0.000000 0 0 300 32 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_076 igs rpl36|infA rpl36-infA 83417 83536 0 120 LSC 0.008333 1 0 300 9 no 1.000000 2 1.000000 NA 1.000000 43.000000 infA gene infA infA 83537 83770 -1 234 LSC 0.008547 2 0 87 11 no 1.000000 2 1.000000 NA 1.000000 43.200000 IGS_077 igs infA|rps8 infA-rps8 83771 83894 0 124 LSC 0.008333 1 4 127 102 no 1.000000 2 1.000000 NA 0.967742 53.000000 rps8 gene rps8 rps8 83895 84299 -1 405 LSC 0.002469 1 0 112 74 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_078 igs rps8|rpl14 rps8-rpl14 84300 84493 0 194 LSC 0.005780 1 21 300 18 no 1.000000 2 1.000000 NA 0.891753 45.300000 rpl14 gene rpl14 rpl14 84494 84862 -1 369 LSC 0.002710 1 0 119 98 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_079 igs rpl14|rpl16 rpl14-rpl16 84863 84993 0 131 LSC 0.007812 1 3 300 45 no 1.000000 2 1.000000 NA 0.977099 47.600000 rpl16 gene rpl16 rpl16 84994 85353 -1 360 LSC 0.008333 3 0 32 245 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_080 igs rpl16|rps3 rpl16-rps3 85354 86654 0 1301 LSC 0.016204 21 5 206 36 yes 1.000000 2 1.000000 NA 0.996157 56.100000 rps3 gene rps3 rps3 86655 87311 -1 657 LSC 0.007610 5 0 51 300 no 1.000000 2 1.000000 NA 1.000000 52.000000 rpl22 gene rpl22 rpl22 87296 87826 -1 531 LSC 0.005650 3 0 85 300 no 1.000000 2 1.000000 NA 1.000000 51.900000 IGS_082 igs rpl22|rps19 rpl22-rps19 87827 87862 0 36 LSC 0.000000 0 0 47 300 no 0.000000 1 0.000000 NA 1.000000 22.300000 rps19 gene rps19 rps19 87863 88141 -1 279 LSC 0.000000 0 2 83 300 no 1.000000 2 1.000000 NA 0.992832 44.400000 IGS_083 igs rps19|rpl2 rps19-rpl2 88142 88293 0 152 IRb 0.000000 0 52 300 300 no 1.000000 2 1.000000 NA 0.657895 49.100000 rpl2 gene rpl2 rpl2 88294 89782 -1 1489 IRb 0.000672 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_084 igs rpl2|rpl23 rpl2-rpl23 89783 89800 0 18 IRb 0.000000 0 0 31 300 no 0.000000 1 0.000000 NA 1.000000 21.100000 rpl23 gene rpl23 rpl23 89801 90082 -1 282 IRb 0.000000 0 0 49 300 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_085 igs rpl23|trnI-CAU rpl23-trnI-CAU 90083 90247 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 90248 90321 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_086 igs trnI-CAU|ycf2 trnI-CAU-ycf2 90322 90409 0 88 IRb 0.000000 0 0 300 281 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 90410 97288 1 6879 IRb 0.001454 10 0 300 300 no 1.000000 2 1.000000 NA 1.000000 53.300000 IGS_087 igs ycf2|trnL-CAA ycf2-trnL-CAA 97289 97999 0 711 IRb 0.001406 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 98000 98080 -1 81 IRb 0.000000 0 0 8 300 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_088 igs trnL-CAA|ndhB trnL-CAA-ndhB 98081 98674 0 594 IRb 0.000000 0 0 89 300 no 0.000000 1 0.000000 NA 1.000000 31.600000 ndhB gene ndhB ndhB 98675 100886 -1 2212 IRb 0.000904 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.800000 IGS_089 igs ndhB|rps7 ndhB-rps7 100887 101206 0 320 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 rps7 gene rps7 rps7 101207 101674 -1 468 IRb 0.000000 0 0 300 229 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_090 igs rps7|trnV-GAC rps7-trnV-GAC 101675 104374 0 2700 IRb 0.002597 7 5 300 300 no 1.000000 2 1.000000 NA 0.998148 57.900000 trnV-GAC tRNA trnV-GAC trnV-GAC 104375 104446 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_091 igs trnV-GAC|rrn16 trnV-GAC-rrn16 104447 104665 0 219 IRb 0.000000 0 0 300 109 no 0.000000 1 0.000000 NA 1.000000 26.900000 rrn16 rRNA rrn16 rrn16 104666 106156 1 1491 IRb 0.001341 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_092 igs rrn16|trnI-GAU rrn16-trnI-GAU 106157 106462 0 306 IRb 0.000000 0 6 300 300 no 1.000000 2 1.000000 NA 0.980392 54.500000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 106463 106504 1 42 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 107447 107481 1 35 IRb 0.000000 0 0 279 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_095 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 107482 107545 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 107546 107583 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 108379 108413 1 35 IRb 0.000000 0 0 300 27 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_098 igs trnA-UGC|rrn23 trnA-UGC-rrn23 108414 108585 0 172 IRb 0.023256 4 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 65.900000 rrn23 rRNA rrn23 rrn23 108586 111388 1 2803 IRb 0.000000 0 0 25 300 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_099 igs rrn23|rrn4.5 rrn23-rrn4.5 111389 111486 0 98 IRb 0.000000 0 0 300 236 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 111487 111589 1 103 IRb 0.000000 0 0 300 133 no 0.000000 1 0.000000 NA 1.000000 28.700000 IGS_100 igs rrn4.5|rrn5 rrn4.5-rrn5 111590 111802 0 213 IRb 0.004695 1 0 300 158 no 1.000000 2 1.000000 NA 1.000000 52.000000 rrn5 rRNA rrn5 rrn5 111803 111923 1 121 IRb 0.000000 0 0 79 37 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_101 igs rrn5|trnR-ACG rrn5-trnR-ACG 111924 112182 0 259 IRb 0.003861 1 0 200 229 no 1.000000 2 1.000000 NA 1.000000 54.700000 trnR-ACG tRNA trnR-ACG trnR-ACG 112183 112256 1 74 IRb 0.000000 0 0 221 155 no 0.000000 1 0.000000 NA 1.000000 30.400000 IGS_102 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 112257 112849 0 593 IRb 0.011804 7 0 295 103 no 1.000000 2 1.000000 NA 1.000000 58.100000 trnN-GUU tRNA trnN-GUU trnN-GUU 112850 112921 -1 72 IRb 0.000000 0 0 19 31 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_103 igs trnN-GUU|ycf1 trnN-GUU-ycf1 112922 113243 0 322 IRb 0.012658 4 6 91 300 no 1.000000 2 1.000000 NA 0.981366 53.800000 ycf1 gene ycf1 ycf1 113244 114329 1 1086 IRb 0.004604 5 0 34 24 no 1.000000 2 1.000000 NA 1.000000 48.200000 ndhF gene ndhF ndhF 114249 116540 -1 2292 SSC 0.012216 28 0 40 53 no 1.000000 2 1.000000 NA 1.000000 52.100000 IGS_105 igs ndhF|rpl32 ndhF-rpl32 116541 117545 0 1005 SSC 0.033000 33 5 201 56 yes 1.000000 2 1.000000 NA 0.995025 67.400000 rpl32 gene rpl32 rpl32 117546 117719 1 174 SSC 0.011494 2 0 24 82 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_106 igs rpl32|trnL-UAG rpl32-trnL-UAG 117720 118915 0 1196 SSC 0.018487 22 6 21 151 no 1.000000 2 1.000000 NA 0.994983 56.400000 trnL-UAG tRNA trnL-UAG trnL-UAG 118916 118995 1 80 SSC 0.000000 0 0 121 71 no 0.000000 1 0.000000 NA 1.000000 24.100000 IGS_107 igs trnL-UAG|ccsA trnL-UAG-ccsA 118996 119118 0 123 SSC 0.032520 4 0 201 68 no 1.000000 2 1.000000 NA 1.000000 61.300000 ccsA gene ccsA ccsA 119119 120081 1 963 SSC 0.008307 8 0 32 113 no 1.000000 2 1.000000 NA 1.000000 50.900000 IGS_108 igs ccsA|ndhD ccsA-ndhD 120082 120390 0 309 SSC 0.017361 5 21 33 249 no 1.000000 2 1.000000 NA 0.932039 54.300000 ndhD gene ndhD ndhD 120391 121953 -1 1563 SSC 0.005118 8 0 38 300 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_109 igs ndhD|psaC ndhD-psaC 121954 122023 0 70 SSC 0.000000 0 0 67 288 no 0.000000 1 0.000000 NA 1.000000 23.800000 psaC gene psaC psaC 122024 122269 -1 246 SSC 0.000000 0 0 137 42 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_110 igs psaC|ndhE psaC-ndhE 122270 122518 0 249 SSC 0.008032 2 0 300 117 no 1.000000 2 1.000000 NA 1.000000 50.900000 ndhE gene ndhE ndhE 122519 122824 -1 306 SSC 0.003268 1 0 35 168 no 1.000000 2 1.000000 NA 1.000000 42.100000 IGS_111 igs ndhE|ndhG ndhE-ndhG 122825 123064 0 240 SSC 0.008333 2 0 188 149 no 1.000000 2 1.000000 NA 1.000000 53.500000 ndhG gene ndhG ndhG 123065 123595 -1 531 SSC 0.005650 3 0 22 6 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_112 igs ndhG|ndhI ndhG-ndhI 123596 123967 0 372 SSC 0.010753 4 0 207 27 no 1.000000 2 1.000000 NA 1.000000 47.200000 ndhI gene ndhI ndhI 123968 124471 -1 504 SSC 0.005952 3 0 238 18 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_113 igs ndhI|ndhA ndhI-ndhA 124472 124547 0 76 SSC 0.013158 1 0 215 184 no 1.000000 2 1.000000 NA 1.000000 58.900000 ndhA gene ndhA ndhA 124548 126765 -1 2218 SSC 0.009959 22 9 57 300 no 1.000000 2 1.000000 NA 0.995942 52.600000 IGS_114 igs ndhA|ndhH ndhA-ndhH 126766 126766 0 1 SSC 0.000000 0 0 47 300 no 0.000000 1 0.000000 NA 1.000000 22.300000 ndhH gene ndhH ndhH 126767 127948 -1 1182 SSC 0.003384 4 0 48 48 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_115 igs ndhH|rps15 ndhH-rps15 127949 128051 0 103 SSC 0.009709 1 0 257 12 no 1.000000 2 1.000000 NA 1.000000 44.000000 rps15 gene rps15 rps15 128052 128318 -1 267 SSC 0.014981 4 0 54 17 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_116 igs rps15|trnN-GUU rps15-trnN-GUU 128319 134583 0 6265 SSC 0.017333 108 34 27 91 yes 1.000000 2 1.000000 NA 0.994573 50.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 134584 134655 1 72 IRa 0.000000 0 0 31 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_117 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 134656 135248 0 593 IRa 0.011804 7 0 103 295 no 1.000000 2 1.000000 NA 1.000000 58.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 135249 135322 -1 74 IRa 0.000000 0 0 155 221 no 0.000000 1 0.000000 NA 1.000000 30.400000 IGS_118 igs trnR-ACG|rrn5 trnR-ACG-rrn5 135323 135581 0 259 IRa 0.003861 1 0 229 200 no 1.000000 2 1.000000 NA 1.000000 54.700000 rrn5 rRNA rrn5 rrn5 135582 135702 -1 121 IRa 0.000000 0 0 37 79 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_119 igs rrn5|rrn4.5 rrn5-rrn4.5 135703 135915 0 213 IRa 0.004695 1 0 158 300 no 1.000000 2 1.000000 NA 1.000000 52.000000 rrn4.5 rRNA rrn4.5 rrn4.5 135916 136018 -1 103 IRa 0.000000 0 0 133 300 no 0.000000 1 0.000000 NA 1.000000 28.700000 IGS_120 igs rrn4.5|rrn23 rrn4.5-rrn23 136019 136116 0 98 IRa 0.000000 0 0 236 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 136117 138919 -1 2803 IRa 0.000000 0 0 300 25 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_121 igs rrn23|trnA-UGC rrn23-trnA-UGC 138920 139091 0 172 IRa 0.023256 4 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 65.900000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 139092 139126 -1 35 IRa 0.000000 0 0 27 300 no 0.000000 1 0.000000 NA 1.000000 20.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 139922 139959 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_124 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 139960 140023 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 140024 140058 -1 35 IRa 0.000000 0 0 300 279 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 141001 141042 -1 42 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_127 igs trnI-GAU|rrn16 trnI-GAU-rrn16 141043 141348 0 306 IRa 0.000000 0 6 300 300 no 1.000000 2 1.000000 NA 0.980392 54.500000 rrn16 rRNA rrn16 rrn16 141349 142839 -1 1491 IRa 0.001341 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_128 igs rrn16|trnV-GAC rrn16-trnV-GAC 142840 143058 0 219 IRa 0.000000 0 0 109 300 no 0.000000 1 0.000000 NA 1.000000 26.900000 trnV-GAC tRNA trnV-GAC trnV-GAC 143059 143130 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_129 igs trnV-GAC|rps12 trnV-GAC-rps12 143131 144983 0 1853 IRa 0.001623 3 5 300 89 no 1.000000 2 1.000000 NA 0.997302 50.900000 rps12_part2 gene rps12 rps12 144984 145777 1 794 IRa 0.005038 4 0 172 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_130 igs rps12|rps7 rps12-rps7 145778 145830 0 53 IRa 0.000000 0 0 176 300 no 0.000000 1 0.000000 NA 1.000000 31.900000 rps7 gene rps7 rps7 145831 146298 1 468 IRa 0.000000 0 0 229 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_131 igs rps7|ndhB rps7-ndhB 146299 146618 0 320 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 ndhB gene ndhB ndhB 146619 148830 1 2212 IRa 0.000904 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.800000 IGS_132 igs ndhB|trnL-CAA ndhB-trnL-CAA 148831 149424 0 594 IRa 0.000000 0 0 300 89 no 0.000000 1 0.000000 NA 1.000000 31.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 149425 149505 1 81 IRa 0.000000 0 0 300 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_133 igs trnL-CAA|ycf2 trnL-CAA-ycf2 149506 150216 0 711 IRa 0.001406 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.600000 ycf2 gene ycf2 ycf2 150217 157095 -1 6879 IRa 0.001454 10 0 300 300 no 1.000000 2 1.000000 NA 1.000000 53.300000 IGS_134 igs ycf2|trnI-CAU ycf2-trnI-CAU 157096 157183 0 88 IRa 0.000000 0 0 281 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 157184 157257 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_135 igs trnI-CAU|rpl23 trnI-CAU-rpl23 157258 157422 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 157423 157704 1 282 IRa 0.000000 0 0 300 49 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_136 igs rpl23|rpl2 rpl23-rpl2 157705 157722 0 18 IRa 0.000000 0 0 300 31 no 0.000000 1 0.000000 NA 1.000000 21.100000 rpl2 gene rpl2 rpl2 157723 159211 1 1489 IRa 0.000672 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_137 igs rpl2|trnH-GUG rpl2-trnH-GUG 159212 201 0 448 IRa 0.010283 4 59 300 136 no 1.000000 2 1.000000 NA 0.868304 59.100000