primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 AATGGTAAATGGGCGAACGA GCCGGTAGTAGGTATCTGGT 20 20 45.0 55.0 57.9 58.0 0.0 1.9 0.124289 92 313 537-537 0.125000 44.0 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 AATGGTAAATGGGCGAACGA TGGCCGGTAGTAGGTATCTG 20 20 45.0 55.0 57.9 58.0 0.0 1.9 0.125706 92 313 539-539 0.125000 44.0 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATGGTAAATGGGCGAACGA GAGCTTAGTTTCCGTCTGGG 20 20 45.0 55.0 57.9 58.0 0.0 0.0 0.128367 92 313 977-977 0.125000 44.0 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 AATGGTAAATGGGCGAACGA GGAGCTTAGTTTCCGTCTGG 20 20 45.0 55.0 57.9 58.0 0.0 0.0 0.128367 92 313 978-978 0.125000 44.0 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 AATGGTAAATGGGCGAACGA GGGAGCTTAGTTTCCGTCTG 20 20 45.0 55.0 57.9 58.0 0.0 0.0 0.128367 92 313 979-979 0.125000 44.0 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT ATCCTAATCAAACGAAATTCAA 20 22 50.0 27.3 58.2 52.1 20.3 0.0 8.069933 4165 4883 725-891 1.000000 50.9 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAAGCCGAGTACTCTACCGT TCCTAATCAAACGAAATTCAAT 20 22 50.0 27.3 58.2 52.1 20.3 0.0 8.069933 4165 4883 724-890 1.000000 50.9 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAGCCGAGTACTCTACCGTT ATCCTAATCAAACGAAATTCAA 20 22 50.0 27.3 58.2 52.1 20.3 0.0 8.069933 4165 4883 724-890 1.000000 50.9 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT TCCTAATCAAACGAAATTCAAT 20 22 50.0 27.3 58.2 52.1 20.3 0.0 8.069933 4165 4883 723-889 1.000000 50.9 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT TCCTAATCAAACGAAATTCAATT 20 23 50.0 26.1 58.2 53.0 20.3 0.0 8.192086 4165 4883 723-889 1.000000 50.9 trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 GACCAAAACCCGTTGCCTTA AGGCAGAATTAAGACAGATACAGA 20 24 50.0 37.5 58.7 57.2 0.0 0.0 5.477920 7123 7788 553-750 1.000000 52.0 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 GACCAAAACCCGTTGCCTTA GGGCAATTTTCCGAAGAAA 20 19 50.0 42.1 58.7 54.2 0.0 0.0 5.529191 7123 7788 588-794 1.000000 52.0 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 AAAACCCGTTGCCTTACCAC AGGCAGAATTAAGACAGATACAGA 20 24 50.0 37.5 59.0 57.2 0.0 0.0 5.764071 7123 7788 549-746 1.000000 52.0 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 ACCAAAACCCGTTGCCTTAC AGGCAGAATTAAGACAGATACAGA 20 24 50.0 37.5 59.0 57.2 0.0 0.0 5.764071 7123 7788 552-749 1.000000 52.0 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 CAAAACCCGTTGCCTTACCA AGGCAGAATTAAGACAGATACAGA 20 24 50.0 37.5 59.0 57.2 0.0 0.0 5.764853 7123 7788 550-747 1.000000 52.0 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CTCATTTCCATCCACGAGCA CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.110548 30345 31491 1230-1351 1.000000 89.2 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CCCTCATTTCCATCCACGAG CCGGATTTGAACTGGGGAAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.123086 30345 31491 1232-1353 1.000000 89.1 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CTCATTTCCATCCACGAGCA AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 58.0 58.4 0.0 14.6 0.383911 30345 31491 1212-1333 1.000000 87.1 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CCCTCATTTCCATCCACGAG AAAAGGATTTGCAGTCCCCC 20 20 55.0 50.0 58.0 58.4 0.0 14.6 0.396449 30345 31491 1214-1335 1.000000 87.0 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TTCCCTCATTTCCATCCACG CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.6 58.1 0.0 0.0 0.500496 30345 31491 1234-1355 1.000000 86.1 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AGAGATGTCCTGAACCGCTA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 35128 36208 1040-1201 1.000000 90.4 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 35128 36208 1038-1199 1.000000 90.4 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GATGTCCTGAACCGCTAGAC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.217323 35128 36208 1037-1198 1.000000 89.9 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 CTTGCTTTCCTAGTCCACCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.121313 35128 36208 1170-1257 0.375000 62.4 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CTTGCTTTCCTAGTCCACCC TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.218880 35128 36208 1135-1222 0.375000 61.7 trnL-UAA-trnF-GAA_p1 trnL-UAA-trnF-GAA 1 AATCGTGAGGGTTCAAGTCC TCTACCAGCTGAGCTATCCC 20 20 50.0 55.0 57.5 58.0 0.0 17.4 0.476915 52423 52740 367-392 1.000000 87.4 trnL-UAA-trnF-GAA_p2 trnL-UAA-trnF-GAA 2 AATCGTGAGGGTTCAAGTCC TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 57.5 58.1 0.0 20.1 0.526305 52423 52740 403-428 1.000000 86.4 trnL-UAA-trnF-GAA_p3 trnL-UAA-trnF-GAA 3 AATCGTGAGGGTTCAAGTCC TCAGTCCTCTGCTCTACCAG 20 20 50.0 55.0 57.5 57.9 0.0 0.0 0.610708 52423 52740 379-404 1.000000 86.1 trnL-UAA-trnF-GAA_p4 trnL-UAA-trnF-GAA 4 TTCAAGTCCCTCTATCCCCA TCTACCAGCTGAGCTATCCC 20 20 50.0 55.0 57.0 58.0 0.0 17.4 0.964041 52423 52740 356-381 1.000000 83.7 trnL-UAA-trnF-GAA_p5 trnL-UAA-trnF-GAA 5 AATCGTGAGGGTTCAAGTCC GAACTGGTGACACGAGGATT 20 20 50.0 50.0 57.5 57.5 0.0 20.1 0.931776 52423 52740 400-425 1.000000 83.2 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GCCTTTGTTAATCGGGGCTA TGAGTCTAAGGGCCTCAACA 20 20 50.0 50.0 58.0 58.0 0.0 6.5 0.071178 55115 56685 963-2115 1.000000 91.4 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GCCTTTGTTAATCGGGGCTA GGTTGATCTAGGCCAGAAGC 20 20 50.0 55.0 58.0 58.0 0.0 5.0 0.086585 55115 56685 855-2006 1.000000 91.3 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 CCTCCGGTAATTGTACAGGC TGAGTCTAAGGGCCTCAACA 20 20 55.0 50.0 58.1 58.0 0.0 6.5 0.074710 55115 56685 1600-2752 1.000000 90.2 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CTCCGGTAATTGTACAGGCC TGAGTCTAAGGGCCTCAACA 20 20 55.0 50.0 58.1 58.0 0.0 6.5 0.074710 55115 56685 2159-2751 0.250000 53.4 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CTCCGGTAATTGTACAGGCC GGTTGATCTAGGCCAGAAGC 20 20 55.0 55.0 58.1 58.0 0.0 5.0 0.090118 55115 56685 2050-2642 0.250000 53.3 rpl20-rps12_p1 rpl20-rps12 1 ACGAGCTATATATCCCCGTCT ACATGTACTCGGGTGTAT 21 18 47.6 44.4 57.4 52.1 0.0 0.0 9.596979 74189 75335 1000-1215 1.000000 52.0 rpl20-rps12_p2 rpl20-rps12 2 ACGAGCTATATATCCCCGTC ACATGTACTCGGGTGTAT 20 18 50.0 44.4 55.8 52.1 0.0 0.0 10.146858 74189 75335 1000-1215 1.000000 52.0 rpl20-rps12_p3 rpl20-rps12 3 CGAGCTATATATCCCCGTCT ACATGTACTCGGGTGTAT 20 18 50.0 44.4 55.5 52.1 0.0 0.0 10.448015 74189 75335 999-1214 1.000000 52.0 rpl20-rps12_p4 rpl20-rps12 4 ACGAGCTATATATCCCCGTCTA ACATGTACTCGGGTGTAT 22 18 45.5 44.4 57.2 52.1 0.0 0.0 10.716050 74189 75335 1000-1215 1.000000 52.0 rpl20-rps12_p5 rpl20-rps12 5 TACGAGCTATATATCCCCGTCT ACATGTACTCGGGTGTAT 22 18 45.5 44.4 57.2 52.1 0.0 0.0 10.716050 74189 75335 1001-1216 1.000000 52.0 Ycf1_p1 Ycf1 1 CCCGGAACTTCTTCGTAGTG GAAAACCCTTCCTGCAGACA 20 20 55.0 50.0 58.0 58.0 0.7 17.4 0.026574 114326 114857 1186-1302 0.250000 54.0 Ycf1_p2 Ycf1 2 CCGGAACTTCTTCGTAGTGG GAAAACCCTTCCTGCAGACA 20 20 55.0 50.0 58.0 58.0 0.0 17.4 0.026574 114326 114857 1185-1301 0.250000 54.0 Ycf1_p3 Ycf1 3 AACCCACGACCAATATGAGC GAAAACCCTTCCTGCAGACA 20 20 50.0 50.0 58.0 58.0 0.0 17.4 0.057130 114326 114857 1226-1342 0.250000 53.8 Ycf1_p4 Ycf1 4 CCCGGAACTTCTTCGTAGTG AATGGGACGGAAAACCCTTC 20 20 55.0 50.0 58.0 58.1 0.7 0.0 0.088590 114326 114857 1195-1311 0.250000 53.5 Ycf1_p5 Ycf1 5 CCGGAACTTCTTCGTAGTGG AATGGGACGGAAAACCCTTC 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.088590 114326 114857 1194-1310 0.250000 53.5 Ycf1-ndhF_p1 Ycf1-ndhF 1 TTCCTTTTCCCAGTTCAGGC CAGTCTTAACGGGGTGCATT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.183407 114858 115165 944-944 0.250000 48.7 Ycf1-ndhF_p2 Ycf1-ndhF 2 GGCTATGGAAGAAGGAACCG CAGTCTTAACGGGGTGCATT 20 20 55.0 50.0 58.0 58.2 0.0 0.0 0.223857 114858 115165 921-921 0.250000 48.4 Ycf1-ndhF_p3 Ycf1-ndhF 3 CAATTCGGTCGTTTTGGTCG CAGTCTTAACGGGGTGCATT 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.233576 114858 115165 1014-1014 0.250000 48.3 Ycf1-ndhF_p4 Ycf1-ndhF 4 GAAGAAGGCAGCAGCAAAAG CAGTCTTAACGGGGTGCATT 20 20 50.0 50.0 57.9 58.2 2.7 0.0 0.240523 114858 115165 894-894 0.250000 48.3 Ycf1-ndhF_p5 Ycf1-ndhF 5 AGGAACCGAGAACGAGAAGA CAGTCTTAACGGGGTGCATT 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.271794 114858 115165 909-909 0.250000 48.0 ndhF-rpl32_p1 ndhF-rpl32 1 CTTGAGGTCGTGTGAACCAA AAAGAGGCTCTCCCCATCTT 20 20 50.0 50.0 58.1 58.0 0.0 19.0 0.073535 117389 118080 1775-1783 0.250000 50.0 ndhF-rpl32_p2 ndhF-rpl32 2 AGGAGCCACCCGTATTGATA AAAGAGGCTCTCCCCATCTT 20 20 50.0 50.0 57.9 58.0 0.0 19.0 0.118749 117389 118080 1296-1304 0.250000 49.7 ndhF-rpl32_p3 ndhF-rpl32 3 TAGGAGCCACCCGTATTGAT AAAGAGGCTCTCCCCATCTT 20 20 50.0 50.0 57.9 58.0 0.0 19.0 0.118749 117389 118080 1297-1305 0.250000 49.7 ndhF-rpl32_p4 ndhF-rpl32 4 CGTCGGCAAAATAAGAAGGC AAAGAGGCTCTCCCCATCTT 20 20 50.0 50.0 57.8 58.0 0.0 19.0 0.195699 117389 118080 1357-1365 0.250000 49.1 ndhF-rpl32_p5 ndhF-rpl32 5 AGTGGGATGAAGGGTAGGAG AAAGAGGCTCTCCCCATCTT 20 20 55.0 50.0 57.8 58.0 0.0 19.0 0.204155 117389 118080 1311-1319 0.250000 49.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ACCTACCCCATTTGACCAGT AACCACTCGGATTGAAGAGC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.345405 118240 119227 2013-2019 0.250000 47.9 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 ACCTACCCCATTTGACCAGT TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.369077 118240 119227 1481-1488 0.250000 47.9 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 ACCTACCCCATTTGACCAGT TAACAGTCCGGAAGTAGCGA 20 20 50.0 50.0 58.2 58.2 0.0 5.2 0.419710 118240 119227 1960-1966 0.250000 47.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 ACCTACCCCATTTGACCAGT AGCACTTGACCCGGTTATTG 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.423584 118240 119227 1924-1930 0.250000 47.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ACCTACCCCATTTGACCAGT CTTGACCCGGTTATTGTGCT 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.423584 118240 119227 1920-1926 0.250000 47.3 Ycf1_p1 Ycf1 1 GTCTCCCTTTTCGGTTCCTG CGACTTGAAGCTCTCGACAA 20 20 55.0 50.0 58.2 57.9 0.0 0.0 0.242195 133206 133325 899-1043 1.000000 90.1 Ycf1_p2 Ycf1 2 GGTTCCTGTTCCGATTCCAA CGACTTGAAGCTCTCGACAA 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.246080 133206 133325 887-1031 1.000000 90.0 Ycf1_p3 Ycf1 3 GTCTCCCTTTTCGGTTCCTG TAAGTGGGCCCTATCGCTTA 20 20 55.0 50.0 58.2 57.9 0.0 25.7 0.281414 133206 133325 643-859 1.000000 89.7 Ycf1_p4 Ycf1 4 TTCCTCGTCTTCCTCGTCTT TAAGTGGGCCCTATCGCTTA 20 20 50.0 50.0 58.1 57.9 0.0 25.7 0.184109 133206 133325 719-785 0.375000 63.9 Ycf1_p5 Ycf1 5 TTCCTCGTCTTCCTCGTCTT CGACTTGAAGCTCTCGACAA 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.144889 133206 133325 903-969 0.375000 63.6 Ycf1-trnN-GUU_p1 Ycf1-trnN-GUU 1 GCCTGAACTGGGAAAAGGAA CGGGAGAATTGATGACTGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.033044 135101 135869 853-1157 0.875000 82.5 Ycf1-trnN-GUU_p2 Ycf1-trnN-GUU 2 GCCTGAACTGGGAAAAGGAA GTAAATCTTCCTCGGCCAGG 20 20 50.0 55.0 58.0 58.0 0.0 13.4 0.049697 135101 135869 970-1274 0.875000 82.1 Ycf1-trnN-GUU_p3 Ycf1-trnN-GUU 3 GCCTGAACTGGGAAAAGGAA AGAATGATGGGGATAGCGGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.034651 135101 135869 1134-1438 0.875000 81.8 Ycf1-trnN-GUU_p4 Ycf1-trnN-GUU 4 GCCTGAACTGGGAAAAGGAA AGATAAACGCGCCTTCACAT 20 20 50.0 45.0 58.0 58.0 0.0 5.7 0.028799 135101 135869 1357-1661 0.750000 76.0 Ycf1-trnN-GUU_p5 Ycf1-trnN-GUU 5 GCCTGAACTGGGAAAAGGAA ATAAACGCGCCTTCACATCT 20 20 50.0 45.0 58.0 58.0 0.0 5.7 0.028799 135101 135869 1355-1659 0.750000 76.0