primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf3-psaA_p1 ycf3-psaA 1 TCACGAGGCGTTTCGAATAA TGAGAAATGACCCGGTTTGG 20 20 45.0 50.0 57.6 58.1 15.7 0.0 0.446612 16571 17247 796-817 1.000000 82.8 ycf3-psaA_p2 ycf3-psaA 2 TCACGAGGCGTTTCGAATAA CCCAGTTCTCGAAAGACGTT 20 20 45.0 50.0 57.6 57.8 15.7 0.0 0.501296 16571 17247 776-797 1.000000 82.5 ycf3-psaA_p3 ycf3-psaA 3 ATCACGAGGCGTTTCGAATA TGAGAAATGACCCGGTTTGG 20 20 45.0 50.0 57.4 58.1 15.7 0.0 0.667904 16571 17247 797-818 1.000000 81.0 ycf3-psaA_p4 ycf3-psaA 4 ATCACGAGGCGTTTCGAATA CCCAGTTCTCGAAAGACGTT 20 20 45.0 50.0 57.4 57.8 15.7 0.0 0.722588 16571 17247 777-798 1.000000 80.7 ycf3-psaA_p5 ycf3-psaA 5 TCACGAGGCGTTTCGAATAA TTTGGCCCAGTTCTCGAAAG 20 20 45.0 50.0 57.6 58.4 15.7 0.0 0.746295 16571 17247 781-802 1.000000 80.5 rps16-trnK-UUU_p1 rps16-trnK-UUU 1 GAACTTCCGTCTAATCAAATGA AAAGCCGAGTACTCTACCGT 22 20 36.4 50.0 54.2 58.2 0.0 20.3 5.931107 54253 55332 1147-1151 1.000000 46.8 rps16-trnK-UUU_p2 rps16-trnK-UUU 2 GAACTTCCGTCTAATCAAATGA AAGCCGAGTACTCTACCGTT 22 20 36.4 50.0 54.2 58.2 0.0 20.3 5.931107 54253 55332 1146-1150 1.000000 46.8 rps16-trnK-UUU_p3 rps16-trnK-UUU 3 GAACTTCCGTCTAATCAAATGA TCTAGCCGCACTTAAAAGCC 22 20 36.4 50.0 54.2 58.3 0.0 0.0 6.028524 54253 55332 1161-1165 1.000000 46.7 rps16-trnK-UUU_p4 rps16-trnK-UUU 4 GAACTTCCGTCTAATCAAATGA TCAGTCGTGGTCTTCCAAAC 22 20 36.4 50.0 54.2 57.8 0.0 0.0 5.996987 54253 55332 1232-1236 1.000000 46.3 rps16-trnK-UUU_p5 rps16-trnK-UUU 5 GAACTTCCGTCTAATCAAATGA CAGTCGTGGTCTTCCAAACT 22 20 36.4 50.0 54.2 57.8 0.0 0.0 6.003180 54253 55332 1231-1235 1.000000 46.3 trnK-UUU-accD_p1 trnK-UUU-accD 1 CTAGTTCCGGGTTCGAATCC CCTCATGTTTAGGAGTTTTTGACA 20 24 55.0 37.5 57.8 57.4 18.0 0.0 4.853979 57881 59569 1746-2631 1.000000 53.0 trnK-UUU-accD_p2 trnK-UUU-accD 2 CTAGTTCCGGGTTCGAATCC TCCTCATGTTTAGGAGTTTTTGAC 20 24 55.0 37.5 57.8 57.1 18.0 0.0 5.098090 57881 59569 1747-2632 1.000000 51.9 trnK-UUU-accD_p3 trnK-UUU-accD 3 ACTCCATCCGACTAGTTCCG CCTCATGTTTAGGAGTTTTTGACA 20 24 55.0 37.5 58.6 57.4 0.0 0.0 5.242935 57881 59569 1757-2642 1.000000 51.9 trnK-UUU-accD_p4 trnK-UUU-accD 4 CTAGTTCCGGGTTCGAATCC CCTCATGTTTAGGAGTTTTTGACAT 20 25 55.0 36.0 57.8 57.8 18.0 0.0 5.439963 57881 59569 1746-2631 1.000000 51.9 trnK-UUU-accD_p5 trnK-UUU-accD 5 CTAGTTCCGGGTTCGAATCC TCCTCATGTTTAGGAGTTTTTGA 20 23 55.0 34.8 57.8 55.8 18.0 0.0 5.445153 57881 59569 1747-2632 1.000000 51.9 accD_p1 accD 1 GATCTCTTACACAACGCGGT AGATCGTTTTCTGCAGGCAT 20 20 50.0 45.0 58.0 57.9 12.5 15.1 0.127632 59570 61966 2718-2977 1.000000 85.8 accD_p2 accD 2 TGATCTCTTACACAACGCGG AGATCGTTTTCTGCAGGCAT 20 20 50.0 45.0 58.0 57.9 12.5 15.1 0.129002 59570 61966 2719-2978 1.000000 85.8 accD_p3 accD 3 GATCTCTTACACAACGCGGT TTGCAATGGCCGGAAATACT 20 20 50.0 45.0 58.0 58.2 12.5 5.0 0.161824 59570 61966 2531-2785 1.000000 85.6 accD_p4 accD 4 TGATCTCTTACACAACGCGG TTGCAATGGCCGGAAATACT 20 20 50.0 45.0 58.0 58.2 12.5 5.0 0.163194 59570 61966 2532-2786 1.000000 85.6 accD_p5 accD 5 GATCTCTTACACAACGCGGT ACCACAGATCGTTTTCTGCA 20 20 50.0 45.0 58.0 57.7 12.5 11.0 0.262376 59570 61966 2982-2982 0.500000 57.9 psaJ-rpl33_p1 psaJ-rpl33 1 CGCTATGGTTCGGGGTTTTA TGCCCCTTGGTACCTTCTTA 20 20 50.0 50.0 58.0 58.0 0.0 14.4 0.074773 70268 70756 657-666 1.000000 85.7 psaJ-rpl33_p2 psaJ-rpl33 2 TCGGGGTTTTAGCAGGTCTA TGCCCCTTGGTACCTTCTTA 20 20 50.0 50.0 58.1 58.0 0.0 14.4 0.106392 70268 70756 648-657 1.000000 85.5 psaJ-rpl33_p3 psaJ-rpl33 3 CGCTATGGTTCGGGGTTTTA ACAATCAATTCGATCCCCCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.059685 70268 70756 1027-1034 1.000000 85.3 psaJ-rpl33_p4 psaJ-rpl33 4 TCGGGGTTTTAGCAGGTCTA ACAATCAATTCGATCCCCCG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.091304 70268 70756 1018-1025 1.000000 85.1 psaJ-rpl33_p5 psaJ-rpl33 5 CGCTATGGTTCGGGGTTTTA GGGACAAAGGCCTACGAAAA 20 20 50.0 50.0 58.0 58.1 0.0 5.2 0.126758 70268 70756 998-1005 1.000000 84.9 rps18_p1 rps18 1 AGAAATAAACTAAACAAACAAACC TGAATAAAGAATAAGCCTCCCT 24 22 25.0 36.4 52.7 54.6 0.0 0.0 14.760600 71117 71560 479-495 1.000000 47.1 rps18_p2 rps18 2 AGAAATAAACTAAACAAACAAACC ATGAATAAAGAATAAGCCTCCCT 24 23 25.0 34.8 52.7 55.1 0.0 0.0 15.184289 71117 71560 480-496 1.000000 47.1 rps18_p3 rps18 3 AGAAATAAACTAAACAAACAAACC TGAATAAAGAATAAGCCTCCC 24 21 25.0 38.1 52.7 53.0 0.0 0.0 15.349892 71117 71560 479-495 1.000000 47.1 rps18_p4 rps18 4 AGAAATAAACTAAACAAACAAACC AATGAATAAAGAATAAGCCTCCCT 24 24 25.0 33.3 52.7 55.9 0.0 0.0 15.452164 71117 71560 481-497 1.000000 47.1 rps18_p5 rps18 5 AGAAATAAACTAAACAAACAAACC TCAAATGAATAAAGAATAAGCCTCCC 24 26 25.0 34.6 52.7 57.8 0.0 0.0 15.553029 71117 71560 484-500 1.000000 47.1 psbB-psbT_p1 psbB-psbT 1 GAGCATTCCAAAAACTTGGGG GAACTTTAGGCGGTTCTCGA 21 20 47.6 50.0 58.0 57.6 4.1 0.0 1.403174 77071 77267 335-336 1.000000 70.7 psbB-psbT_p2 psbB-psbT 2 GGAGCATTCCAAAAACTTGGG GAACTTTAGGCGGTTCTCGA 21 20 47.6 50.0 58.0 57.6 4.1 0.0 1.403174 77071 77267 336-337 1.000000 70.7 psbB-psbT_p3 psbB-psbT 3 GCTCAAGTAGAGTTTGGAGCA GAACTTTAGGCGGTTCTCGA 21 20 47.6 50.0 58.0 57.6 0.0 0.0 1.404540 77071 77267 351-352 1.000000 70.6 psbB-psbT_p4 psbB-psbT 4 TGCTCAAGTAGAGTTTGGAGC GAACTTTAGGCGGTTCTCGA 21 20 47.6 50.0 58.0 57.6 0.0 0.0 1.404540 77071 77267 352-353 1.000000 70.6 psbB-psbT_p5 psbB-psbT 5 TCCAAAAACTTGGGGATCCA GAACTTTAGGCGGTTCTCGA 20 20 45.0 50.0 56.9 57.6 15.2 0.0 1.442173 77071 77267 329-330 1.000000 70.4 trnM-CAU-ycf2_p1 trnM-CAU-ycf2 1 GTTGGGCGCTTTAACCATTC AGACAAAGCCACATGGAGAC 20 20 50.0 50.0 58.0 57.8 7.6 0.9 0.200329 89664 91970 2244-2384 1.000000 84.2 trnM-CAU-ycf2_p2 trnM-CAU-ycf2 2 GTTGGGCGCTTTAACCATTC GACAAAGCCACATGGAGACT 20 20 50.0 50.0 58.0 57.8 7.6 0.9 0.200329 89664 91970 2243-2383 1.000000 84.2 trnM-CAU-ycf2_p3 trnM-CAU-ycf2 3 AGTTGGGCGCTTTAACCATT AGACAAAGCCACATGGAGAC 20 20 45.0 50.0 58.4 57.8 7.6 0.9 0.563264 89664 91970 2245-2385 1.000000 81.3 trnM-CAU-ycf2_p4 trnM-CAU-ycf2 4 AGTTGGGCGCTTTAACCATT GACAAAGCCACATGGAGACT 20 20 45.0 50.0 58.4 57.8 7.6 0.9 0.563264 89664 91970 2244-2384 1.000000 81.3 trnM-CAU-ycf2_p5 trnM-CAU-ycf2 5 TTGGGCGCTTTAACCATTCA GACAAAGCCACATGGAGACT 20 20 45.0 50.0 58.4 57.8 7.6 0.9 0.569136 89664 91970 2242-2382 1.000000 81.2 rrn5S-trnR-ACG_p1 rrn5S-trnR-ACG 1 TCGTTCATGGTTCGACATCC GGTACTGACCTTTTTGGCCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.014876 110490 110728 470-470 0.500000 59.9 rrn5S-trnR-ACG_p2 rrn5S-trnR-ACG 2 CGTTCATGGTTCGACATCCT GGTACTGACCTTTTTGGCCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.020439 110490 110728 469-469 0.500000 59.8 rrn5S-trnR-ACG_p3 rrn5S-trnR-ACG 3 TCGTTCATGGTTCGACATCC TTCAGAATAAAGGGGCTCGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.042969 110490 110728 987-987 0.500000 59.7 rrn5S-trnR-ACG_p4 rrn5S-trnR-ACG 4 CGTTCATGGTTCGACATCCT TTCAGAATAAAGGGGCTCGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048532 110490 110728 986-986 0.500000 59.6 rrn5S-trnR-ACG_p5 rrn5S-trnR-ACG 5 GGAAAAATAGCTCGAGGCCA GGTACTGACCTTTTTGGCCA 20 20 50.0 50.0 58.0 58.0 15.6 0.0 0.048681 110490 110728 358-358 0.500000 59.6 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CAGAGGATTAGAGCACGTGG TGGTCGTAGGTTCGAATCCT 20 20 55.0 50.0 57.8 58.2 18.9 18.9 0.372539 110803 111365 655-673 1.000000 82.3 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 CAGAGGATTAGAGCACGTGG CGATTGGTCGTAGGTTCGAA 20 20 55.0 50.0 57.8 57.7 18.9 0.0 0.483095 110803 111365 659-677 1.000000 81.4 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 CAGAGGATTAGAGCACGTGG CTCAGTAGCTCAGCGGTAGA 20 20 55.0 55.0 57.8 58.3 18.9 0.0 0.546303 110803 111365 695-713 1.000000 80.6 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 CAGAGGATTAGAGCACGTGG TCAGTAGCTCAGCGGTAGAG 20 20 55.0 55.0 57.8 58.3 18.9 0.0 0.546303 110803 111365 694-712 1.000000 80.6 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 CAGAGGATTAGAGCACGTGG TTGGTCGTAGGTTCGAATCC 20 20 55.0 50.0 57.8 57.3 18.9 4.4 0.876096 110803 111365 656-674 1.000000 78.3 trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 AGGATTCGAACCTACGACCA TCAGCAAATAAATAGCAGTTCT 20 22 50.0 31.8 58.2 53.8 15.0 0.0 6.346716 111438 113551 2207-2207 0.500000 20.0 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 CTCTACCGCTGAGCTACTGA TCAGCAAATAAATAGCAGTTCT 20 22 55.0 31.8 58.3 53.8 1.8 0.0 6.520480 111438 113551 2168-2168 0.500000 20.0 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 TCTACCGCTGAGCTACTGAG TCAGCAAATAAATAGCAGTTCT 20 22 55.0 31.8 58.3 53.8 1.8 0.0 6.520480 111438 113551 2167-2167 0.500000 20.0 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 AGGATTCGAACCTACGACCA TTCAGCAAATAAATAGCAGTTCT 20 23 50.0 30.4 58.2 54.6 15.0 0.0 6.542305 111438 113551 2208-2208 0.500000 20.0 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 TCTACCGCTGAGCTACTGAG TTCAGCAAATAAATAGCAGTTCT 20 23 55.0 30.4 58.3 54.6 1.8 0.0 6.716069 111438 113551 2168-2168 0.500000 20.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GCGGGGTATTGGACATCATT AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.026574 114471 115216 928-928 0.500000 59.8 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GCGGGGTATTGGACATCATT CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.027944 114471 115216 929-929 0.500000 59.8 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GCGGGGTATTGGACATCATT TTAGCCACTCGGATTGAAGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.042919 114471 115216 1526-1526 0.500000 59.7 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GCGGGGTATTGGACATCATT AAGCGCGGGTACTAAGATTG 20 20 50.0 50.0 58.0 58.1 0.0 8.8 0.082811 114471 115216 1510-1510 0.500000 59.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GCGGGGTATTGGACATCATT ATTGAAGCGCGGGTACTAAG 20 20 50.0 50.0 58.0 58.1 0.0 8.8 0.082811 114471 115216 1514-1514 0.500000 59.3 ndhD_p1 ndhD 1 GGGAGGCCATCAAAAAGCTA TCTGCTCCAAGGACTGAAGA 20 20 50.0 50.0 57.9 58.0 5.0 0.0 0.159332 117316 118173 1421-1436 1.000000 83.4 ndhD_p2 ndhD 2 GGGGGCCAGAATCAGAAAAA TCTGCTCCAAGGACTGAAGA 20 20 50.0 50.0 58.1 58.0 4.4 0.0 0.078265 117316 118173 1651-1651 0.500000 59.4 ndhD_p3 ndhD 3 GGGGGCCAGAATCAGAAAAA TCTCGCTCATCAACCCATTG 20 20 50.0 50.0 58.1 58.0 4.4 0.0 0.091229 117316 118173 1912-1912 0.500000 59.3 ndhD_p4 ndhD 4 GGGGGCCAGAATCAGAAAAA CTGCTCCAAGGACTGAAGAC 20 20 50.0 55.0 58.1 57.9 4.4 0.0 0.154661 117316 118173 1650-1650 0.500000 58.8 ndhD_p5 ndhD 5 GGGGGCCAGAATCAGAAAAA GCTCCAAGGACTGAAGACTG 20 20 50.0 55.0 58.1 57.9 4.4 0.0 0.154661 117316 118173 1648-1648 0.500000 58.8 ycf1-rrn5S_p1 ycf1-rrn5S 1 AGCTGTCCCACAAGAAAACC AGACTGAGAGGTCTTAAGCT 20 20 50.0 45.0 58.3 54.9 0.0 0.0 3.416104 128191 128310 753-753 0.500000 32.7 ycf1-rrn5S_p2 ycf1-rrn5S 2 AACCAGTTCCTGCTGCTATC AGACTGAGAGGTCTTAAGCT 20 20 50.0 45.0 57.6 54.9 0.0 0.0 3.518463 128191 128310 737-737 0.500000 31.9 ycf1-rrn5S_p3 ycf1-rrn5S 3 ACCAGTTCCTGCTGCTATCT AGACTGAGAGGTCTTAAGCT 20 20 50.0 45.0 58.4 54.9 0.0 0.0 3.530779 128191 128310 736-736 0.500000 31.8 ycf1-rrn5S_p4 ycf1-rrn5S 4 GTCTCTGTGATTGTGCCAGA AGACTGAGAGGTCTTAAGCT 20 20 50.0 45.0 57.5 54.9 0.0 0.0 3.570971 128191 128310 874-874 0.500000 31.4 ycf1-rrn5S_p5 ycf1-rrn5S 5 AGTCTCTGTGATTGTGCCAG AGACTGAGAGGTCTTAAGCT 20 20 50.0 45.0 57.5 54.9 0.0 0.0 3.577788 128191 128310 875-875 0.500000 31.4 ycf2-trnM-CAU_p1 ycf2-trnM-CAU 1 AGACAAAGCCACATGGAGAC GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 57.8 58.0 0.9 7.6 0.200329 146952 149258 2244-2384 1.000000 84.2 ycf2-trnM-CAU_p2 ycf2-trnM-CAU 2 GACAAAGCCACATGGAGACT GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 57.8 58.0 0.9 7.6 0.200329 146952 149258 2243-2383 1.000000 84.2 ycf2-trnM-CAU_p3 ycf2-trnM-CAU 3 AGACAAAGCCACATGGAGAC AGTTGGGCGCTTTAACCATT 20 20 50.0 45.0 57.8 58.4 0.9 7.6 0.563264 146952 149258 2245-2385 1.000000 81.3 ycf2-trnM-CAU_p4 ycf2-trnM-CAU 4 GACAAAGCCACATGGAGACT AGTTGGGCGCTTTAACCATT 20 20 50.0 45.0 57.8 58.4 0.9 7.6 0.563264 146952 149258 2244-2384 1.000000 81.3 ycf2-trnM-CAU_p5 ycf2-trnM-CAU 5 GACAAAGCCACATGGAGACT TTGGGCGCTTTAACCATTCA 20 20 50.0 45.0 57.8 58.4 0.9 7.6 0.569136 146952 149258 2242-2382 1.000000 81.2