primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU_p1 trnK-UUU 1 ATTTTCCGGATGGGTTGCC TCGATCATATCTACATATCATATTTTC 19 27 52.6 25.9 58.4 53.4 4.1 0.0 13.050118 1397 4033 2684-2692 1.000000 41.8 trnK-UUU_p2 trnK-UUU 2 ATTTTCCGGATGGGTTGCC CGATCATATCTACATATCATATTTTC 19 26 52.6 26.9 58.4 52.1 4.1 0.0 13.356018 1397 4033 2683-2691 1.000000 41.8 trnK-UUU_p3 trnK-UUU 3 TTTTCCGGATGGGTTGCC TCGATCATATCTACATATCATATTTTC 18 27 55.6 25.9 57.9 53.4 4.1 0.0 13.746210 1397 4033 2683-2691 1.000000 41.8 trnK-UUU_p4 trnK-UUU 4 TTTTCCGGATGGGTTGCC CGATCATATCTACATATCATATTTTC 18 26 55.6 26.9 57.9 52.1 4.1 0.0 14.052110 1397 4033 2682-2690 1.000000 41.8 trnK-UUU_p5 trnK-UUU 5 ATTTTCCGGATGGGTTGCCC TCGATCATATCTACATATCATATTTTC 20 27 55.0 25.9 61.0 53.4 4.1 0.0 14.616378 1397 4033 2684-2692 1.000000 41.8 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CAGCCGATCATGTCCTTCAA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.104521 5627 6712 1017-1177 1.000000 85.1 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 GCCGATCATGTCCTTCAAGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.105939 5627 6712 1015-1175 1.000000 85.1 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AATCCACAGCCGATCATGTC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 5627 6712 1023-1183 1.000000 85.0 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 GAATCCACAGCCGATCATGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 5627 6712 1024-1184 1.000000 85.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5627 6712 999-1159 1.000000 84.2 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 ATTAGCAATCCGCCGCTTTA ACGAATCACACTTTTACCACT 20 21 45.0 38.1 58.0 55.5 0.0 0.0 3.574049 7984 8802 884-918 1.000000 56.8 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 TCGAACCCTCGGTACCAATA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 57.9 55.5 13.5 0.0 3.678199 7984 8802 917-951 1.000000 55.8 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ATTAGCAATCCGCCGCTTTA AGAACGAATCACACTTTTACCAC 20 23 45.0 39.1 58.0 57.3 0.0 0.0 3.706765 7984 8802 887-921 1.000000 55.8 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 ATTAGCAATCCGCCGCTTTA GAACGAATCACACTTTTACCACT 20 23 45.0 39.1 58.0 57.3 0.0 0.0 3.706765 7984 8802 886-920 1.000000 55.8 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 GTCTTAAGCGATCGAAGGGG ACGAATCACACTTTTACCACT 20 21 55.0 38.1 58.1 55.5 21.6 0.0 3.681616 7984 8802 953-987 1.000000 55.6 atpF-atpH_p1 atpF-atpH 1 TTAAACCCGAAACTCCCAGC CGGACTAGTCGTGGCATTAG 20 20 50.0 55.0 58.1 57.9 0.0 16.6 0.220871 12871 13048 295-603 1.000000 79.2 atpF-atpH_p2 atpF-atpH 2 TTAAACCCGAAACTCCCAGC GGACTAGTCGTGGCATTAGC 20 20 50.0 55.0 58.1 58.1 0.0 16.6 0.245528 12871 13048 294-602 1.000000 79.0 atpF-atpH_p3 atpF-atpH 3 TTAAACCCGAAACTCCCAGC GCGGAGGGTAAAATACGAGG 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.237784 12871 13048 360-668 1.000000 78.9 atpF-atpH_p4 atpF-atpH 4 TTAAACCCGAAACTCCCAGC AGTCGTGGCATTAGCACTTT 20 20 50.0 45.0 58.1 57.8 0.0 0.0 0.284759 12871 13048 289-597 1.000000 78.7 atpF-atpH_p5 atpF-atpH 5 TTAAACCCGAAACTCCCAGC ACTAGTCGTGGCATTAGCAC 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.395007 12871 13048 292-600 1.000000 77.8 atpH-atpI_p1 atpH-atpI 1 TCCGATAGAAGCAAGCCCTA TTTTTGCAACTTTAGCCGCG 20 20 50.0 45.0 57.9 58.5 0.0 0.0 0.599863 13295 13855 679-686 1.000000 77.7 atpH-atpI_p2 atpH-atpI 2 AACGGAAGCAGCAGAAATCA TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.1 58.5 0.0 0.0 0.621503 13295 13855 640-647 1.000000 77.6 atpH-atpI_p3 atpH-atpI 3 TCCGATAGAAGCAAGCCCTA TAGGTGAATCCATGGAGGGT 20 20 50.0 50.0 57.9 57.4 0.0 21.3 0.669200 13295 13855 652-659 1.000000 77.2 atpH-atpI_p4 atpH-atpI 4 TACCCTCTACAGCTTGACCC TTTTTGCAACTTTAGCCGCG 20 20 55.0 45.0 58.1 58.5 0.0 0.0 0.655741 13295 13855 725-732 1.000000 77.1 atpH-atpI_p5 atpH-atpI 5 GATAGAAGCAAGCCCTACGG TTTTTGCAACTTTAGCCGCG 20 20 55.0 45.0 57.8 58.5 0.0 0.0 0.674066 13295 13855 676-683 1.000000 77.1 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGAATGAACAGTGCCGTAGC TGCCATATGTCTCACTGGGA 20 20 50.0 50.0 58.3 58.1 0.0 1.2 0.394936 28596 29392 820-937 1.000000 81.6 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AGAATGAACAGTGCCGTAGC TTCAATTGGTCAGAGCACCG 20 20 50.0 50.0 58.3 58.5 0.0 5.4 0.750478 28596 29392 794-911 1.000000 78.7 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AGAATGAACAGTGCCGTAGC ATGCCATATGTCTCACTGGG 20 20 50.0 50.0 58.3 57.1 0.0 1.2 1.218227 28596 29392 821-938 1.000000 75.0 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 TAGAATGAACAGTGCCGTAGC TGCCATATGTCTCACTGGGA 21 20 47.6 50.0 58.1 58.1 0.0 1.2 1.233196 28596 29392 821-938 1.000000 74.8 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 ACTAGAATGAACAGTGCCGT TGCCATATGTCTCACTGGGA 20 20 45.0 50.0 56.9 58.1 0.0 1.2 1.252324 28596 29392 823-940 1.000000 74.7 trnS-UGA-lhbA_p1 trnS-UGA-lhbA 1 GTTTTCAAGACCGGGGCTAT ACCAACCATCAGAAGAAGCA 20 20 50.0 45.0 57.9 57.0 0.8 0.0 1.081679 34429 34776 489-489 1.000000 73.0 trnS-UGA-lhbA_p2 trnS-UGA-lhbA 2 AGCAAAAGGAGAGAGAGGGA ACCAACCATCAGAAGAAGCA 20 20 50.0 45.0 57.7 57.0 0.0 0.0 1.291408 34429 34776 547-547 1.000000 71.1 trnS-UGA-lhbA_p3 trnS-UGA-lhbA 3 GTTTTCAAGACCGGGGCTAT GACCAACCATCAGAAGAAGCA 20 21 50.0 47.6 57.9 58.2 0.8 0.0 1.341143 34429 34776 490-490 1.000000 70.9 trnS-UGA-lhbA_p4 trnS-UGA-lhbA 4 GTTTTCAAGACCGGGGCTAT TGACCAACCATCAGAAGAAGC 20 21 50.0 47.6 57.9 58.2 0.8 0.0 1.341143 34429 34776 491-491 1.000000 70.9 trnS-UGA-lhbA_p5 trnS-UGA-lhbA 5 GTTTTCAAGACCGGGGCTAT ACCAACCATCAGAAGAAGCAA 20 21 50.0 42.9 57.9 57.8 0.8 0.0 1.352465 34429 34776 489-489 1.000000 70.8 trnL-UAA_p1 trnL-UAA 1 AGTATTCCAAATCGCGCTGT GTGCCAGGAACCAGATTTGA 20 20 45.0 50.0 58.0 58.1 5.6 0.0 0.114476 46186 46808 1325-1349 1.000000 81.5 trnL-UAA_p2 trnL-UAA 2 AGTATTCCAAATCGCGCTGT ATGTATCCCGACCCGTCTAG 20 20 45.0 55.0 58.0 58.1 5.6 0.0 0.117186 46186 46808 1383-1407 1.000000 81.4 trnL-UAA_p3 trnL-UAA 3 AGTATTCCAAATCGCGCTGT CGTGCATCATCCTAGTGGAG 20 20 45.0 55.0 58.0 57.9 5.6 0.0 0.170133 46186 46808 1244-1268 1.000000 81.2 trnL-UAA_p4 trnL-UAA 4 AGTATTCCAAATCGCGCTGT GAGCTATCCCGACCATTTCC 20 20 45.0 55.0 58.0 57.8 5.6 0.0 0.195516 46186 46808 1264-1288 1.000000 80.9 trnL-UAA_p5 trnL-UAA 5 AGACATCCCTCCAGCTTCAT GTGCCAGGAACCAGATTTGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199748 46186 46808 1397-1421 1.000000 80.7 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CTCCACTAGGATGATGCACG TGAAAGTTGGATAGGCTGGC 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.274728 47263 47965 874-879 1.000000 79.4 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 GGAAATGGTCGGGATAGCTC TGAAAGTTGGATAGGCTGGC 20 20 55.0 50.0 57.8 57.9 0.0 0.0 0.300111 47263 47965 854-859 1.000000 79.2 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 AATGGTCGGGATAGCTCAGT TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.334056 47263 47965 851-856 1.000000 78.9 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 ATGGTCGGGATAGCTCAGTT TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.334056 47263 47965 850-855 1.000000 78.9 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CTCCACTAGGATGATGCACG ATAGGCTGGCCCTTACGTAA 20 20 55.0 50.0 57.9 58.2 0.0 7.9 0.348637 47263 47965 864-869 1.000000 78.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CGGGGCTAAAACTCCAGAAA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.391484 49645 50186 664-674 1.000000 79.0 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGTCCTTTACTAATCGGGGC AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 57.7 57.8 0.0 0.0 0.448692 49645 50186 678-688 1.000000 78.5 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ATCGGGGCTAAAACTCCAGA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.4 57.8 0.0 0.0 0.617224 49645 50186 666-676 1.000000 77.2 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 AATCGGGGCTAAAACTCCAG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.6 57.8 0.0 0.0 0.617342 49645 50186 667-677 1.000000 77.2 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CGGGGCTAAAACTCCAGAAA AGCCCAATGCAACAAAATGC 20 20 50.0 45.0 57.8 58.5 0.0 0.0 0.668261 49645 50186 746-756 1.000000 76.6 accD-psaI_p1 accD-psaI 1 AGTTCCACGGTTTCTTTCCC CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.049947 57422 58099 650-792 1.000000 84.4 accD-psaI_p2 accD-psaI 2 GTTCCACGGTTTCTTTCCCT CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.049947 57422 58099 649-791 1.000000 84.4 accD-psaI_p3 accD-psaI 3 CCACGGTTTCTTTCCCTTGA CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.051344 57422 58099 646-788 1.000000 84.4 accD-psaI_p4 accD-psaI 4 TCCACGGTTTCTTTCCCTTG CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.051344 57422 58099 647-789 1.000000 84.4 accD-psaI_p5 accD-psaI 5 GTTCCACGGTTTCTTTCCCT AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 58.0 57.9 0.0 26.8 0.126481 57422 58099 655-797 1.000000 83.7 rpl16-rps3_p1 rpl16-rps3 1 AACGAGTCACACACTAAGCA TTTGGATATTTGTAGACGAGT 20 21 45.0 33.3 57.1 52.3 0.0 0.0 7.567542 80994 81162 211-213 1.000000 44.2 rpl16-rps3_p2 rpl16-rps3 2 ACGAGTCACACACTAAGCAT TTTGGATATTTGTAGACGAGT 20 21 45.0 33.3 56.9 52.3 0.0 0.0 7.793829 80994 81162 210-212 1.000000 44.2 rpl16-rps3_p3 rpl16-rps3 3 AACGAGTCACACACTAAGCAT TTTGGATATTTGTAGACGAGT 21 21 42.9 33.3 57.6 52.3 0.0 0.0 8.071383 80994 81162 211-213 1.000000 44.2 rpl16-rps3_p4 rpl16-rps3 4 AACGAGTCACACACTAAGCA ATTTGGATATTTGTAGACGAGT 20 22 45.0 31.8 57.1 53.0 0.0 0.0 7.883707 80994 81162 212-214 1.000000 44.1 rpl16-rps3_p5 rpl16-rps3 5 AACGAGTCACACACTAAGCA AATTTGGATATTTGTAGACGAGT 20 23 45.0 30.4 57.1 53.8 0.0 0.0 8.042198 80994 81162 213-215 1.000000 44.1 rps3_p1 rps3 1 TGACAAGACAAATAAAGGTCCAC CCACCTGTCATATAACAATTGT 23 22 39.1 36.4 57.0 54.2 0.0 4.9 9.863900 81163 81816 772-800 1.000000 43.3 rps3_p2 rps3 2 GACAAGACAAATAAAGGTCCACT CCACCTGTCATATAACAATTGT 23 22 39.1 36.4 56.7 54.2 0.0 4.9 10.126092 81163 81816 771-799 1.000000 43.3 rps3_p3 rps3 3 TGACAAGACAAATAAAGGTCCACT CCACCTGTCATATAACAATTGT 24 22 37.5 36.4 58.3 54.2 0.0 4.9 10.153010 81163 81816 772-800 1.000000 43.3 rps3_p4 rps3 4 TGACAAGACAAATAAAGGTCCA CCACCTGTCATATAACAATTGT 22 22 36.4 36.4 55.6 54.2 0.0 4.9 10.275847 81163 81816 772-800 1.000000 43.3 rps3_p5 rps3 5 ACAAGACAAATAAAGGTCCACT CCACCTGTCATATAACAATTGT 22 22 36.4 36.4 55.6 54.2 0.0 4.9 10.289706 81163 81816 770-798 1.000000 43.3 ndhE-psaC_p1 ndhE-psaC 1 GGAAGCAGCTATTGGGCTAT CTTAGCTTTACACCCGTCCC 20 20 50.0 55.0 57.4 58.0 0.0 0.0 0.595752 119669 120053 540-587 1.000000 80.6 ndhE-psaC_p2 ndhE-psaC 2 GGAAGCAGCTATTGGGCTAT TTACACCCGTCCCAAGGTAT 20 20 50.0 50.0 57.4 58.0 0.0 0.0 0.620354 119669 120053 533-580 1.000000 80.5 ndhE-psaC_p3 ndhE-psaC 3 GGAAGCAGCTATTGGGCTAT TGCTTAGCTTTACACCCGTC 20 20 50.0 50.0 57.4 57.9 0.0 5.6 0.664754 119669 120053 542-589 1.000000 80.1 ndhE-psaC_p4 ndhE-psaC 4 GGAAGCAGCTATTGGGCTAT CAAAACATCCGTTGGGCAAG 20 20 50.0 50.0 57.4 58.2 0.0 0.0 0.793761 119669 120053 507-554 1.000000 79.1 ndhE-psaC_p5 ndhE-psaC 5 TGTTATAGCGATTGCAGCCG CTTAGCTTTACACCCGTCCC 20 20 50.0 55.0 58.8 58.0 7.9 0.0 0.802946 119669 120053 561-608 1.000000 78.9 ndhD_p1 ndhD 1 GGGACGGGTGTAAAGCTAAG GCATTCTTTCCGGAGCAGTA 20 20 55.0 50.0 58.0 58.0 0.0 3.3 0.044123 120418 121923 2244-2278 1.000000 80.6 ndhD_p2 ndhD 2 ATACCTTGGGACGGGTGTAA GCATTCTTTCCGGAGCAGTA 20 20 50.0 50.0 58.0 58.0 0.0 3.3 0.068725 120418 121923 2251-2285 1.000000 80.4 ndhD_p3 ndhD 3 GGGACGGGTGTAAAGCTAAG TTTCTTTGGCGAGCTCCAAT 20 20 55.0 45.0 58.0 58.1 0.0 8.5 0.110248 120418 121923 2402-2436 1.000000 80.1 ndhD_p4 ndhD 4 GACGGGTGTAAAGCTAAGCA GCATTCTTTCCGGAGCAGTA 20 20 50.0 50.0 57.9 58.0 0.0 3.3 0.113125 120418 121923 2242-2276 1.000000 80.1 ndhD_p5 ndhD 5 ATACCTTGGGACGGGTGTAA TTTCTTTGGCGAGCTCCAAT 20 20 50.0 45.0 58.0 58.1 0.0 8.5 0.134849 120418 121923 2409-2443 1.000000 79.9 ndhD-ccsA_p1 ndhD-ccsA 1 ATCCGGATTTCGTTCTCTCC GCGCTTGTGGCTTCTATAGG 20 20 50.0 55.0 57.1 58.8 12.4 0.0 1.671370 121924 122128 387-421 1.000000 69.2 ndhD-ccsA_p2 ndhD-ccsA 2 ATCCGGATTTCGTTCTCTCC GGCGCTTGTGGCTTCTATAG 20 20 50.0 55.0 57.1 58.8 12.4 7.6 1.671370 121924 122128 388-422 1.000000 69.2 ndhD-ccsA_p3 ndhD-ccsA 3 ATCCGGATTTCGTTCTCTCC CGCTTGTGGCTTCTATAGGA 20 20 50.0 50.0 57.1 57.1 12.4 0.0 1.783592 121924 122128 386-420 1.000000 68.3 ndhD-ccsA_p4 ndhD-ccsA 4 CCGGATTTCGTTCTCTCCCT GCGCTTGTGGCTTCTATAGG 20 20 55.0 55.0 59.2 58.8 0.0 0.0 1.953826 121924 122128 385-419 1.000000 67.0 ndhD-ccsA_p5 ndhD-ccsA 5 CCGGATTTCGTTCTCTCCCT GGCGCTTGTGGCTTCTATAG 20 20 55.0 55.0 59.2 58.8 0.0 7.6 1.953826 121924 122128 386-420 1.000000 67.0 rpl32-ndhF_p1 rpl32-ndhF 1 CTTGCTTGTTTGTCGCACAA CAAGAGGTCGTGTGAACCAA 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.145139 124015 124972 1549-1662 1.000000 84.7 rpl32-ndhF_p2 rpl32-ndhF 2 CTTGCTTGTTTGTCGCACAA AGGGGAAATTGTGCGGATTT 20 20 45.0 45.0 58.1 58.1 0.0 0.0 0.156052 124015 124972 1775-1888 1.000000 84.4 rpl32-ndhF_p3 rpl32-ndhF 3 CGCGGTAGGGTTCAGTTTTA CAAGAGGTCGTGTGAACCAA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.135062 124015 124972 2081-2180 0.666667 69.9 rpl32-ndhF_p4 rpl32-ndhF 4 CGCGGTAGGGTTCAGTTTTA AAGGGGAAATTGTGCGGATT 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.145975 124015 124972 2308-2407 0.666667 69.4 rpl32-ndhF_p5 rpl32-ndhF 5 CGCGGTAGGGTTCAGTTTTA AGGGGAAATTGTGCGGATTT 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.145975 124015 124972 2307-2406 0.666667 69.4