primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CCCTTTCAGGATCAGTCGTG GCCGTACGAGGAGAAAACTT 20 20 55.0 50.0 58.0 57.9 0.0 18.8 0.091715 4382 5161 1190-1233 1.000000 91.1 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CCTTTCAGGATCAGTCGTGG GCCGTACGAGGAGAAAACTT 20 20 55.0 50.0 58.0 57.9 0.0 18.8 0.091715 4382 5161 1189-1232 1.000000 91.1 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCTTTCAGGATCAGTCGTGG ACGAATCAACCGTCGGTATG 20 20 55.0 50.0 58.0 58.1 0.0 19.2 0.098463 4382 5161 1627-1675 1.000000 90.8 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCCTTTCAGGATCAGTCGTG AGAACAAGGAAACACCGCTT 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.068518 4382 5161 1494-1542 0.875000 84.6 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CCTTTCAGGATCAGTCGTGG AGAACAAGGAAACACCGCTT 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.068518 4382 5161 1493-1541 0.875000 84.6 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 GATCGTTGCCCCTGAGAAAT CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.100217 6298 7242 1747-1832 1.000000 91.2 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 GATCGTTGCCCCTGAGAAAT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.120224 6298 7242 1163-1247 1.000000 91.0 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 ATACCGACGGTTGATTCGTG CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 58.1 57.9 27.1 0.0 0.138822 6298 7242 1911-1996 1.000000 90.9 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGCGGTGTTTCCTTGTTCT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.9 58.1 0.0 16.9 0.128883 6298 7242 1511-1546 0.875000 83.8 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGCGGTGTTTCCTTGTTCT CTTACAGCAGCTTGCCAAAC 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.108877 6298 7242 2093-2131 0.875000 83.1 trnS-GCU-trnC-GCA_p1 trnS-GCU-trnC-GCA 1 CTTTCGTCCACTCAGCCATC CCGGATTTGAACTGGGGAAA 20 20 55.0 50.0 58.6 58.1 0.0 0.0 0.718384 8603 9353 831-849 1.000000 84.2 trnS-GCU-trnC-GCA_p2 trnS-GCU-trnC-GCA 2 CTTTCGTCCACTCAGCCATC AAAAGGATTTGCAGTCCCCC 20 20 55.0 50.0 58.6 58.4 0.0 14.6 0.991747 8603 9353 813-831 1.000000 82.0 trnS-GCU-trnC-GCA_p3 trnS-GCU-trnC-GCA 3 TTTCGTCCACTCAGCCATCT CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 59.0 58.1 0.0 0.0 1.105487 8603 9353 830-848 1.000000 81.1 trnS-GCU-trnC-GCA_p4 trnS-GCU-trnC-GCA 4 TCCACTCAGCCATCTCTCC CCGGATTTGAACTGGGGAAA 19 20 57.9 50.0 58.1 58.1 0.0 0.0 1.174425 8603 9353 825-843 1.000000 80.5 trnS-GCU-trnC-GCA_p5 trnS-GCU-trnC-GCA 5 ATTAGCAATCCGCCGCTTT CCGGATTTGAACTGGGGAAA 19 20 47.4 50.0 58.2 58.1 0.0 0.0 1.288297 8603 9353 846-864 1.000000 79.6 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.233476 9435 10221 853-915 0.875000 84.8 trnC-GCA-petN_p2 trnC-GCA-petN 2 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 9435 10221 871-933 0.875000 82.5 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTCCCCAGTTCAAATCCGG ATCAACGGGCTATAATGGGC 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.282501 9435 10221 1309-1379 0.500000 63.1 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGGGACTGCAAATCCTTTT ATCAACGGGCTATAATGGGC 20 20 50.0 50.0 58.4 57.8 14.7 0.0 0.555864 9435 10221 1327-1397 0.500000 60.9 trnC-GCA-petN_p5 trnC-GCA-petN 5 TTTCCCCAGTTCAAATCCGG GGCTATAATGGGCGGTAGTC 20 20 50.0 55.0 58.1 57.6 0.0 0.0 0.463853 9435 10221 1302-1372 0.375000 55.5 petN-psbM_p1 petN-psbM 1 GCGGCTAACTAGTTGTGGAA TTTGATTGGTCCGGGAATCC 20 20 50.0 50.0 57.9 57.9 18.6 0.0 0.226759 10312 10807 1460-1516 0.625000 71.1 petN-psbM_p2 petN-psbM 2 TCCGTTCTAGCGTCATTGTG GTCCCGACGGATCCAATAAC 20 20 50.0 55.0 58.0 58.1 0.0 17.5 0.147230 10312 10807 1502-1519 0.375000 58.5 petN-psbM_p3 petN-psbM 3 TCCGTTCTAGCGTCATTGTG TTTGATTGGTCCGGGAATCC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.147011 10312 10807 1138-1152 0.375000 57.9 petN-psbM_p4 petN-psbM 4 TCCGTTCTAGCGTCATTGTG AGTCCCGACGGATCCAATAA 20 20 50.0 50.0 58.0 58.2 0.0 17.5 0.224843 10312 10807 1503-1520 0.375000 57.9 petN-psbM_p5 petN-psbM 5 TCCGTTCTAGCGTCATTGTG CCGCGACTCATCTTTCTCAT 20 20 50.0 50.0 58.0 57.8 0.0 8.2 0.225108 10312 10807 1356-1370 0.250000 50.1 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AAATGCAAGAATATTTACTTCCA CTGTCAAGGCGGACGTTG 23 18 26.1 61.1 52.7 58.8 0.0 7.6 11.095131 10913 11513 654-750 1.000000 52.0 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AATGCAAGAATATTTACTTCCAT CTGTCAAGGCGGACGTTG 23 18 26.1 61.1 52.4 58.8 0.0 7.6 11.312974 10913 11513 653-749 1.000000 52.0 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AAATGCAAGAATATTTACTTCCAT CTGTCAAGGCGGACGTTG 24 18 25.0 61.1 53.3 58.8 0.0 7.6 11.476492 10913 11513 654-750 1.000000 52.0 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 TAAATGCAAGAATATTTACTTCCA CTGTCAAGGCGGACGTTG 24 18 25.0 61.1 52.7 58.8 0.0 7.6 12.015581 10913 11513 655-751 1.000000 52.0 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AAATGCAAGAATATTTACTTCCA CCTGTCAAGGCGGACGTT 23 18 26.1 61.1 52.7 60.0 0.0 7.6 12.308674 10913 11513 655-751 1.000000 52.0 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GAATCAAACCGAGAGACCCC GAAACGGTCCCTACGTAACC 20 20 55.0 55.0 58.0 58.0 0.0 5.0 0.029297 30213 31218 1374-1600 1.000000 91.8 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GAATCAAACCGAGAGACCCC TGGACCAGAGAATGCGATTG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.054008 30213 31218 1740-1966 1.000000 90.8 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GAATCAAACCGAGAGACCCC AAACTAGGCGCAAAGAACCA 20 20 55.0 45.0 58.0 58.0 0.0 10.8 0.049929 30213 31218 1811-2037 1.000000 90.7 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GAATCAAACCGAGAGACCCC AACTAGGCGCAAAGAACCAA 20 20 55.0 45.0 58.0 58.0 0.0 10.8 0.049929 30213 31218 1810-2036 1.000000 90.7 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GAATCAAACCGAGAGACCCC ACCAAAACTAGGCGCAAAGA 20 20 55.0 45.0 58.0 58.0 0.0 10.8 0.049929 30213 31218 1815-2041 1.000000 90.7 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 AACATAGCATCTGAGGCTGC TTGGGTATGGCTCCGACTAT 20 20 50.0 50.0 58.0 57.9 25.4 0.0 0.132558 42842 43757 1830-1953 1.000000 90.8 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 AACATAGCATCTGAGGCTGC TGGGTATGGCTCCGACTATT 20 20 50.0 50.0 58.0 57.9 25.4 0.0 0.132558 42842 43757 1829-1952 1.000000 90.7 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 TCAACGCTTCCCAATTTCCA TTGGGTATGGCTCCGACTAT 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.108817 42842 43757 2108-2231 0.875000 84.9 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 TCAACGCTTCCCAATTTCCA TGGGTATGGCTCCGACTATT 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.108817 42842 43757 2107-2230 0.875000 84.8 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TCAACGCTTCCCAATTTCCA TGAAATGCGCCTGGATAACA 20 20 45.0 45.0 58.0 57.9 0.0 4.2 0.132998 42842 43757 2139-2262 0.875000 84.6 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 45190 45756 602-653 1.000000 89.0 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 45190 45756 634-685 1.000000 88.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 45190 45756 596-647 1.000000 87.7 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT CGTCTACCGATTTCGCCATA 20 20 50.0 50.0 57.8 57.6 15.5 0.0 0.651279 45190 45756 628-679 1.000000 86.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG CGTAGCGTCTACCGATTTCG 20 20 55.0 55.0 57.9 58.6 0.0 10.2 0.749620 45190 45756 601-652 1.000000 86.0 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA TGGCATTCCATTGCTGTCAT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.196601 46696 47321 1011-1051 1.000000 89.0 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA CCCAATGCGCCTATGATGTA 20 20 50.0 50.0 58.1 57.8 0.0 4.2 0.235374 46696 47321 959-993 0.875000 83.8 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA ATAAAAAGTCGCGGCTCACT 20 20 50.0 45.0 58.1 57.9 0.0 16.4 0.146658 46696 47321 1206-1231 0.500000 63.8 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 AGAGACTCGATGGAAGCTGT ATAAAAAGTCGCGGCTCACT 20 20 50.0 45.0 58.2 57.9 0.0 16.4 0.248756 46696 47321 1919-1942 0.500000 63.3 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CCTCGTGTCACCAGTTCAAA ATTATCTCCGCTCCCAATGC 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.243023 46696 47321 993-993 0.125000 43.1 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TCCTTTGCTACTCGGAGCTA ATGAAAGAGCCCAATGCACA 20 20 50.0 45.0 57.9 58.1 4.6 0.0 0.211836 49000 49966 529-1411 1.000000 90.3 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GCGTCGCCTATTGGTTCTAT ATGAAAGAGCCCAATGCACA 20 20 50.0 45.0 57.8 58.1 5.8 0.0 0.222910 49000 49966 579-1461 1.000000 90.2 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GTCTAGGACTCGACCTTGGT ATGAAAGAGCCCAATGCACA 20 20 55.0 45.0 58.2 58.1 0.0 0.0 0.235710 49000 49966 1043-1925 1.000000 89.1 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CGTGAGCCTATTAGGGAAGC ATGAAAGAGCCCAATGCACA 20 20 55.0 45.0 57.8 58.1 11.7 0.0 0.228856 49000 49966 1668-1878 0.875000 83.1 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TCCTTTGCTACTCGGAGCTA GACAAGGGTTCCATCCGTTT 20 20 50.0 50.0 57.9 58.1 4.6 0.0 0.233686 49000 49966 1579-1790 0.500000 63.9 rbcL-accD_p1 rbcL-accD 1 AGGCTACCAAATGGAGTCCT CAATAGGACCAAGACTGCCC 20 20 50.0 55.0 58.0 58.0 11.3 0.0 0.071535 55200 55708 724-749 0.500000 68.8 rbcL-accD_p2 rbcL-accD 2 GGCTACCAAATGGAGTCCTG CAATAGGACCAAGACTGCCC 20 20 55.0 55.0 58.0 58.0 11.3 0.0 0.088245 55200 55708 723-748 0.500000 68.7 rbcL-accD_p3 rbcL-accD 3 CTAACAGGGGGATTCACTGC CAATAGGACCAAGACTGCCC 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.088245 55200 55708 1256-1281 0.500000 66.5 rbcL-accD_p4 rbcL-accD 4 TTGAATGCTACTGCGGGTAC CAATAGGACCAAGACTGCCC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.062665 55200 55708 1346-1371 0.500000 66.2 rbcL-accD_p5 rbcL-accD 5 AATGCTACTGCGGGTACATG CAATAGGACCAAGACTGCCC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.090564 55200 55708 1343-1368 0.500000 66.0 petA-psbJ_p1 petA-psbJ 1 CTGACGGGAGCAAGAGTAAC TGGAGGGAAGTGGGGTAAAT 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.071162 59653 60429 1225-1297 1.000000 90.7 petA-psbJ_p2 petA-psbJ 2 CTGACGGGAGCAAGAGTAAC TCCCTATTCATTGCGGGTTG 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.053665 59653 60429 1791-1863 1.000000 89.1 petA-psbJ_p3 petA-psbJ 3 CGGATTTGGTCAGGGAGATG TCCCTATTCATTGCGGGTTG 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.092293 59653 60429 1571-1643 1.000000 89.1 petA-psbJ_p4 petA-psbJ 4 GCATCTGATGGACGTCAAGT TGGAGGGAAGTGGGGTAAAT 20 20 50.0 50.0 58.0 57.9 18.9 0.0 0.084567 59653 60429 1118-1190 0.750000 79.4 petA-psbJ_p5 petA-psbJ 5 GCATCTGATGGACGTCAAGT TCCCTATTCATTGCGGGTTG 20 20 50.0 50.0 58.0 57.9 18.9 0.0 0.067070 59653 60429 1684-1756 0.750000 78.0 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA AAATAACTAGTTATGGTAGGCA 20 22 50.0 31.8 57.9 52.3 6.4 25.2 7.747449 61221 62374 1281-1377 1.000000 52.0 psbE-petL_p2 psbE-petL 2 AGAACGTTCTCCTGTGCTTC AAATAACTAGTTATGGTAGGCA 20 22 50.0 31.8 57.8 52.3 24.9 25.2 7.852458 61221 62374 1204-1300 1.000000 52.0 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT AAATAACTAGTTATGGTAGGCA 20 22 45.0 31.8 58.2 52.3 0.0 25.2 7.867136 61221 62374 1290-1386 1.000000 52.0 psbE-petL_p4 psbE-petL 4 TGCTGACGAATAACCAACCC AAATAACTAGTTATGGTAGGCA 20 22 50.0 31.8 58.2 52.3 0.0 25.2 7.880041 61221 62374 1295-1391 1.000000 52.0 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG AAATAACTAGTTATGGTAGGCA 20 22 50.0 31.8 57.8 52.3 0.0 25.2 7.883466 61221 62374 1289-1385 1.000000 52.0 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCCGTCGGAAAAAGAAG ATATCTGCCCTTCCCGAGAA 20 20 50.0 50.0 58.0 57.9 17.5 0.0 0.135568 107483 108588 1580-1664 0.750000 80.9 ndhF-rpl32_p2 ndhF-rpl32 2 TGCCGTCGGAAAAAGAAGAA ATATCTGCCCTTCCCGAGAA 20 20 45.0 50.0 58.0 57.9 17.5 0.0 0.146857 107483 108588 1578-1662 0.750000 80.8 ndhF-rpl32_p3 ndhF-rpl32 3 TTGCCGTCGGAAAAAGAAGA ATATCTGCCCTTCCCGAGAA 20 20 45.0 50.0 58.0 57.9 17.5 0.0 0.146857 107483 108588 1579-1663 0.750000 80.8 ndhF-rpl32_p4 ndhF-rpl32 4 GTTGCCGTCGGAAAAAGAAG TATCTGCCCTTCCCGAGAAA 20 20 50.0 50.0 58.0 58.1 17.5 0.0 0.158285 107483 108588 1579-1663 0.750000 80.7 ndhF-rpl32_p5 ndhF-rpl32 5 TGGGTCGATCAAGTATCCGA ATATCTGCCCTTCCCGAGAA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.164663 107483 108588 1755-1839 0.750000 80.5 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 CGGCGTTAAAAGCTTTGTCA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 57.6 58.0 13.5 0.0 0.400763 108754 109602 651-1045 1.000000 88.8 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 CGGCGTTAAAAGCTTTGTCA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 57.6 58.0 13.5 0.0 0.402133 108754 109602 652-1046 1.000000 88.8 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AAGGAAAGGATATTGGGCGG AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 57.6 58.0 0.0 0.0 0.372803 108754 109602 683-1062 0.875000 84.0 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AAGGAAAGGATATTGGGCGG CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 57.6 58.0 0.0 0.0 0.374173 108754 109602 684-1063 0.875000 84.0 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AAGGAAAGGATATTGGGCGG GAAGTAGCAAAGCCTTGGGT 20 20 50.0 50.0 57.6 58.1 0.0 0.0 0.453915 108754 109602 1191-1584 0.875000 83.4 ycf1_p1 ycf1 1 AAGGAAGGCGTTTTGAGAGG AAGAAATCCTCATTCCCCGC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.161033 122055 122174 600-600 0.250000 51.5 ycf1_p2 ycf1 2 AAGGAAGGCGTTTTGAGAGG GAAATCCTCATTCCCCGCTT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.161033 122055 122174 598-598 0.250000 51.5 ycf1_p3 ycf1 3 AAGGAAGGCGTTTTGAGAGG ACCTGATTTTCGTCGATCCG 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.179870 122055 122174 678-678 0.250000 51.2 ycf1_p4 ycf1 4 AAGGAAGGCGTTTTGAGAGG CCTGATTTTCGTCGATCCGT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.179870 122055 122174 677-677 0.250000 51.2 ycf1_p5 ycf1 5 AAGGAAGGCGTTTTGAGAGG ATCAAAGGATCTATGCGGGC 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.293568 122055 122174 656-656 0.250000 50.2