primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 TTAGCAATCCGACGCCTTAG AACTGAGAGACCCCTTAACT 20 20 50.0 45.0 57.8 55.1 0.0 0.0 3.154523 9417 11388 1999-2083 1.000000 60.2 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 TTAGCAATCCGACGCCTTAG ACTGAGAGACCCCTTAACTT 20 20 50.0 45.0 57.8 55.1 0.0 0.0 3.154523 9417 11388 1998-2082 1.000000 60.2 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 TTAGCAATCCGACGCCTTAG ACTGAGAGACCCCTTAACTTTTG 20 23 50.0 43.5 57.8 58.0 0.0 0.0 3.244554 9417 11388 1998-2082 1.000000 59.5 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CGGAGAGAGAGGGATTCGAA AACTGAGAGACCCCTTAACT 20 20 55.0 45.0 58.3 55.1 0.0 0.0 3.254032 9417 11388 2048-2132 1.000000 59.4 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 CGGAGAGAGAGGGATTCGAA ACTGAGAGACCCCTTAACTT 20 20 55.0 45.0 58.3 55.1 0.0 0.0 3.254032 9417 11388 2047-2131 1.000000 59.4 atpH-atpI_p1 atpH-atpI 1 TACCTTCTACAGCTTGGCCT ATAGGGGAATCCATGGAGGG 20 20 50.0 55.0 58.0 57.9 3.3 21.3 0.113177 16196 17427 1377-1494 1.000000 79.6 atpH-atpI_p2 atpH-atpI 2 TACCTTCTACAGCTTGGCCT ATTTTTGCAACCTTAGCCGC 20 20 50.0 45.0 58.0 57.9 3.3 0.0 0.126227 16196 17427 1404-1521 1.000000 79.5 atpH-atpI_p3 atpH-atpI 3 AACAGAAGCGGCAGAAATCA ATAGGGGAATCCATGGAGGG 20 20 45.0 55.0 58.1 57.9 1.4 21.3 0.169579 16196 17427 1292-1409 1.000000 79.2 atpH-atpI_p4 atpH-atpI 4 AACAGAAGCGGCAGAAATCA ATTTTTGCAACCTTAGCCGC 20 20 45.0 45.0 58.1 57.9 1.4 0.0 0.182629 16196 17427 1319-1436 1.000000 79.1 atpH-atpI_p5 atpH-atpI 5 CAGCAGCAATAACAGAAGCG ATAGGGGAATCCATGGAGGG 20 20 50.0 55.0 57.8 57.9 0.0 21.3 0.235461 16196 17427 1302-1419 1.000000 78.7 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 TCCTTTCGTAGTACCCCCAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.149342 35439 36178 879-879 1.000000 79.9 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TCCTTTCGTAGTACCCCCAG CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 58.1 58.1 0.0 0.0 0.207439 35439 36178 858-858 1.000000 79.5 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TCCTTTCGTAGTACCCCCAG TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 58.1 58.1 0.0 0.0 0.229593 35439 36178 855-855 1.000000 79.3 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 35439 36178 843-843 1.000000 79.0 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 35439 36178 822-822 1.000000 78.9 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 36251 37496 1396-1473 1.000000 78.1 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 36251 37496 1399-1476 1.000000 77.9 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 AACGGGCCCTTTTAACTCAG ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 22.4 0.0 0.340432 36251 37496 1415-1492 1.000000 77.9 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG CAAAAACGAAACGGTCCCTC 20 20 55.0 50.0 58.1 57.6 7.6 0.0 0.458613 36251 37496 1395-1472 1.000000 76.9 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 TCAGTGGTAGAGTAACGCCA CAAAAACGAAACGGTCCCTC 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.480767 36251 37496 1398-1475 1.000000 76.8 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 TAGTCCTGGTAAAACCCCCA ATTATGTGAGCCCGCTTAGC 20 20 50.0 50.0 57.6 58.1 0.0 0.0 0.552729 50635 51133 645-651 1.000000 79.3 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 TAGTCCTGGTAAAACCCCCA CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 57.6 57.9 0.0 0.0 0.569704 50635 51133 626-632 1.000000 79.3 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 TAGTCCTGGTAAAACCCCCA GATGGTCATCGGTTCGACTC 20 20 50.0 55.0 57.6 58.2 0.0 0.0 0.595514 50635 51133 595-601 1.000000 79.2 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 TAGTCCTGGTAAAACCCCCA GTGATTATGTGAGCCCGCTT 20 20 50.0 50.0 57.6 58.3 0.0 0.0 0.768545 50635 51133 648-654 1.000000 77.5 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 TAGTCCTGGTAAAACCCCCA ATGTGATTATGTGAGCCCGC 20 20 50.0 50.0 57.6 58.4 0.0 0.0 0.839222 50635 51133 650-656 1.000000 77.0 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CTAACCGGGGCTAAAACTCC AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.0 57.8 6.3 0.0 0.231387 55655 57669 2150-2152 1.000000 79.3 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGGGCTAAAACTCCGGAAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.9 57.8 5.2 0.0 0.336606 55655 57669 2144-2146 1.000000 78.5 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 CTAACCGGGGCTAAAACTCC AGCCCAATGCAACAAAATGC 20 20 55.0 45.0 58.0 58.5 6.3 0.0 0.508164 55655 57669 2232-2234 1.000000 77.1 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CTAACCGGGGCTAAAACTCC GAAGGTCTACGGTTCGAGTC 20 20 55.0 55.0 58.0 57.5 6.3 0.0 0.575159 55655 57669 2149-2151 1.000000 76.6 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGGGCTAAAACTCCGGAAAT AGCCCAATGCAACAAAATGC 20 20 50.0 45.0 57.9 58.5 5.2 0.0 0.613383 55655 57669 2226-2228 1.000000 76.2 accD-psaI_p1 accD-psaI 1 CACGGTTTCCTTCCCTTGAA CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.051344 65263 66143 969-982 1.000000 83.8 accD-psaI_p2 accD-psaI 2 CACGGTTTCCTTCCCTTGAA AGAAACCATTGCAATTGCCG 20 20 50.0 45.0 58.0 57.9 0.0 26.9 0.107507 65263 66143 974-987 1.000000 83.4 accD-psaI_p3 accD-psaI 3 TCAACTCCACGGTTTCCTTC CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.8 58.0 0.0 26.9 0.276847 65263 66143 976-989 1.000000 82.0 accD-psaI_p4 accD-psaI 4 TCAACTCCACGGTTTCCTTC AGAAACCATTGCAATTGCCG 20 20 50.0 45.0 57.8 57.9 0.0 26.9 0.333010 65263 66143 981-994 1.000000 81.6 accD-psaI_p5 accD-psaI 5 TTCAACTCCACGGTTTCCTT CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 57.3 58.0 0.0 26.9 0.748429 65263 66143 977-990 1.000000 78.3 petA-psbJ_p1 petA-psbJ 1 CGGGTCCAAGGTCTTTTGTT TCTGGGTTGGGTTCATCTCT 20 20 50.0 50.0 58.3 58.0 0.0 0.0 0.357230 69692 70704 1148-1148 1.000000 78.3 petA-psbJ_p2 petA-psbJ 2 CGGGTCCAAGGTCTTTTGTT TGGGTTGGGTTCATCTCTCT 20 20 50.0 50.0 58.3 58.0 0.0 0.0 0.357230 69692 70704 1146-1146 1.000000 78.3 petA-psbJ_p3 petA-psbJ 3 CGGGTCCAAGGTCTTTTGTT TGGTATCCCTGTGATCGGTT 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.438308 69692 70704 1197-1197 1.000000 77.6 petA-psbJ_p4 petA-psbJ 4 TACGGGTCCAAGGTCTTTTG TCTGGGTTGGGTTCATCTCT 20 20 50.0 50.0 57.4 58.0 0.0 0.0 0.599163 69692 70704 1150-1150 1.000000 76.4 petA-psbJ_p5 petA-psbJ 5 TACGGGTCCAAGGTCTTTTG TGGGTTGGGTTCATCTCTCT 20 20 50.0 50.0 57.4 58.0 0.0 0.0 0.599163 69692 70704 1148-1148 1.000000 76.4 psaJ-rpl33_p1 psaJ-rpl33 1 ATCGTTTATTCCCGGATGCC ACCCGGGGATTCCTTATTGA 20 20 50.0 50.0 58.1 58.1 0.7 27.9 0.206143 74457 75069 694-741 1.000000 82.4 psaJ-rpl33_p2 psaJ-rpl33 2 GTCTTTAGCAGGCCTGTTGA ACCCGGGGATTCCTTATTGA 20 20 50.0 50.0 57.8 58.1 32.8 27.9 0.283357 74457 75069 723-770 1.000000 81.7 psaJ-rpl33_p3 psaJ-rpl33 3 ATCGTTTATTCCCGGATGCC AGAAATACCCGGGGATTCCT 20 20 50.0 50.0 58.1 57.8 0.7 31.7 0.315717 74457 75069 700-747 1.000000 81.5 psaJ-rpl33_p4 psaJ-rpl33 4 ATCGTTTATTCCCGGATGCC ACATCTTTACCCTTGGCCAC 20 20 50.0 50.0 58.1 57.8 0.7 3.9 0.323733 74457 75069 627-674 1.000000 81.4 psaJ-rpl33_p5 psaJ-rpl33 5 ATCGTTTATTCCCGGATGCC CCCGGGGATTCCTTATTGAC 20 20 50.0 55.0 58.1 57.7 0.7 14.7 0.379734 74457 75069 693-740 1.000000 81.0 rpl20-rps12_p1 rpl20-rps12 1 AGTCTTGAATGAGCTCCCCT TCTCCCGCTCTTAGAGGATG 20 20 50.0 55.0 58.0 58.0 12.1 11.5 0.047721 76405 77166 885-908 1.000000 82.5 rpl20-rps12_p2 rpl20-rps12 2 TGAGCTCCCCTAAAGGTTGA TCTCCCGCTCTTAGAGGATG 20 20 50.0 55.0 58.0 58.0 12.1 11.5 0.050569 76405 77166 876-899 1.000000 82.5 rpl20-rps12_p3 rpl20-rps12 3 TTTTTGTTCGACGTCTCCGA TCTCCCGCTCTTAGAGGATG 20 20 45.0 55.0 57.8 58.0 14.7 11.5 0.218522 76405 77166 842-865 1.000000 81.3 rpl20-rps12_p4 rpl20-rps12 4 TCTCCGAGCTGTATATCCCC TCTCCCGCTCTTAGAGGATG 20 20 55.0 55.0 57.8 58.0 0.0 11.5 0.229217 76405 77166 829-852 1.000000 81.2 rpl20-rps12_p5 rpl20-rps12 5 ATCCCCGTCTAAGTCTGGTC TCTCCCGCTCTTAGAGGATG 20 20 55.0 55.0 58.2 58.0 0.0 11.5 0.233766 76405 77166 815-838 1.000000 81.2 rpl16_p1 rpl16 1 GCGGTTGTTTTTCATCCTCG CGATTGACCATTTCTTAGAATTGC 20 24 50.0 37.5 58.0 57.0 0.0 10.4 5.076010 89050 91365 2301-2370 1.000000 45.3 rpl16_p2 rpl16 2 GCGGTTGTTTTTCATCCTCG CGATTGACCATTTCTTAGAATTGCT 20 25 50.0 36.0 58.0 58.2 0.0 10.4 5.246991 89050 91365 2301-2370 1.000000 45.3 rpl16_p3 rpl16 3 GCGGTTGTTTTTCATCCTCG TCGATTGACCATTTCTTAGAATTGC 20 25 50.0 36.0 58.0 58.2 0.0 10.4 5.251062 89050 91365 2302-2371 1.000000 45.3 rpl16_p4 rpl16 4 GCGGTTGTTTTTCATCCTCG TCTTTTTCCGTTAAATCAACCA 20 22 50.0 31.8 58.0 54.5 0.0 0.0 5.542435 89050 91365 2370-2439 1.000000 45.3 rpl16_p5 rpl16 5 GCGGTTGTTTTTCATCCTCG CCGTTAAATCAACCAAAAATAAGCA 20 25 50.0 32.0 58.0 57.4 0.0 0.0 5.681239 89050 91365 2363-2432 1.000000 45.3 ndhF_p1 ndhF 1 TCAGTGAGGAGAAAACCGGA AAGTTCAGAGTGTCATGCCC 20 20 50.0 50.0 58.3 57.8 9.5 0.0 0.479072 121170 123404 2858-2884 1.000000 76.6 ndhF_p2 ndhF 2 TCAGTGAGGAGAAAACCGGA CAGAGTGTCATGCCCGTAAT 20 20 50.0 50.0 58.3 57.7 9.5 0.0 0.603869 121170 123404 2853-2879 1.000000 75.6 ndhF_p3 ndhF 3 CAGTGAGGAGAAAACCGGAA AAGTTCAGAGTGTCATGCCC 20 20 50.0 50.0 57.5 57.8 9.5 0.0 0.734905 121170 123404 2857-2883 1.000000 74.6 ndhF_p4 ndhF 4 ATGCGTGCTCAAAGACGTAA CAGAGTGTCATGCCCGTAAT 20 20 45.0 50.0 58.2 57.7 0.0 0.0 0.525170 121170 123404 2997-2997 0.500000 55.8 ndhF_p5 ndhF 5 TCTATGCGTGCTCAAAGACG CAGAGTGTCATGCCCGTAAT 20 20 50.0 50.0 58.4 57.7 0.0 0.0 0.686913 121170 123404 3000-3000 0.500000 54.5 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCTGTCGGAATCGGAAT GAAAAAGCCTTTACTGCGGC 20 20 50.0 50.0 58.6 58.3 0.0 0.0 0.932210 123405 124321 1076-1119 1.000000 75.7 ndhF-rpl32_p2 ndhF-rpl32 2 TTTTGTTGCTGTCGGAATCG GAAAAAGCCTTTACTGCGGC 20 20 45.0 50.0 57.3 58.3 0.0 0.0 0.981190 123405 124321 1080-1123 1.000000 75.3 ndhF-rpl32_p3 ndhF-rpl32 3 TGCTGTCGGAATCGGAATAA GAAAAAGCCTTTACTGCGGC 20 20 45.0 50.0 57.0 58.3 0.0 0.0 1.273495 123405 124321 1074-1117 1.000000 73.0 ndhF-rpl32_p4 ndhF-rpl32 4 TTGCTGTCGGAATCGGAATA GAAAAAGCCTTTACTGCGGC 20 20 45.0 50.0 57.0 58.3 0.0 0.0 1.273495 123405 124321 1075-1118 1.000000 73.0 ndhF-rpl32_p5 ndhF-rpl32 5 TTTTTGTTGCTGTCGGAATCG GAAAAAGCCTTTACTGCGGC 21 20 42.9 50.0 58.0 58.3 0.0 0.0 1.308290 123405 124321 1081-1124 1.000000 72.7 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGTTTTTACCGAGCGTTCAA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 57.0 58.0 0.0 0.0 1.050628 124496 125371 931-969 1.000000 75.3 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGTTTTTACCGAGCGTTCAA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 57.0 58.0 0.0 0.0 1.051998 124496 125371 932-970 1.000000 75.3 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGTTTTTACCGAGCGTTCAA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 57.0 57.9 0.0 0.0 1.167075 124496 125371 941-979 1.000000 74.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 ACCGAGCGTTCAAAAAGTTT AGCGTGTCTACCGATTTCAC 20 20 40.0 50.0 56.8 58.0 0.0 0.0 1.225731 124496 125371 924-962 1.000000 73.9 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ACCGAGCGTTCAAAAAGTTT CAGCGTGTCTACCGATTTCA 20 20 40.0 50.0 56.8 58.0 0.0 0.0 1.227101 124496 125371 925-963 1.000000 73.9 ccsA-ndhD_p1 ccsA-ndhD 1 AGGGATAGGTCTACATAGTTATGGT CTCGCTATCAGTTGACAGGG 25 20 40.0 55.0 57.9 57.8 4.3 0.0 5.333238 126519 127108 694-755 1.000000 44.3 ccsA-ndhD_p2 ccsA-ndhD 2 AGGGATAGGTCTACATAGTTATGGT GTTGACAGGGCCCAAGTTAT 25 20 40.0 50.0 57.9 57.8 4.3 27.6 5.333273 126519 127108 684-745 1.000000 44.3 ccsA-ndhD_p3 ccsA-ndhD 3 AGGGATAGGTCTACATAGTTATGGT CCGATTTCGTTCTCTCGCTA 25 20 40.0 50.0 57.9 57.5 4.3 0.0 5.587527 126519 127108 707-768 1.000000 44.3 ccsA-ndhD_p4 ccsA-ndhD 4 AGGGATAGGTCTACATAGTTATGGT ATCCCGATTTCGTTCTCTCG 25 20 40.0 50.0 57.9 57.5 4.3 0.0 5.611044 126519 127108 710-771 1.000000 44.3 ccsA-ndhD_p5 ccsA-ndhD 5 GGGATAGGTCTACATAGTTATGGT CTCGCTATCAGTTGACAGGG 24 20 41.7 55.0 56.6 57.8 4.3 0.0 5.650040 126519 127108 693-754 1.000000 44.3 psaC-ndhE_p1 psaC-ndhE 1 ATACATCTGTAGGGCAGGCT CTGAAGCAGCTATTGGGCTA 20 20 50.0 50.0 57.9 57.4 0.0 0.0 0.736744 128995 130071 1189-1245 1.000000 78.6 psaC-ndhE_p2 psaC-ndhE 2 ATACATCTGTAGGGCAGGCT TGAAGCAGCTATTGGGCTAG 20 20 50.0 50.0 57.9 57.4 0.0 0.0 0.736744 128995 130071 1188-1244 1.000000 78.6 psaC-ndhE_p3 psaC-ndhE 3 ACATCCGTCCCAAGGTATCA CTGAAGCAGCTATTGGGCTA 20 20 50.0 50.0 58.1 57.4 0.0 0.0 0.753385 128995 130071 1215-1271 1.000000 78.5 psaC-ndhE_p4 psaC-ndhE 4 ACATCCGTCCCAAGGTATCA TGAAGCAGCTATTGGGCTAG 20 20 50.0 50.0 58.1 57.4 0.0 0.0 0.753385 128995 130071 1214-1270 1.000000 78.5 psaC-ndhE_p5 psaC-ndhE 5 ATACATCTGTAGGGCAGGCT GAAGCAGCTATTGGGCTAGC 20 20 50.0 55.0 57.9 58.8 0.0 6.0 0.875310 128995 130071 1187-1243 1.000000 77.5 rps15-ycf1_p1 rps15-ycf1 1 TCAACAGAACCCTTGTTTTCT GCTTGTCTGAATCGCTATTGG 21 21 38.1 47.6 55.5 57.4 0.0 0.0 5.056821 135879 136515 801-844 1.000000 41.9 rps15-ycf1_p2 rps15-ycf1 2 TCAACAGAACCCTTGTTTTCT CTTTGGCCCAATTACCGATT 21 20 38.1 45.0 55.5 56.4 0.0 0.0 5.096061 135879 136515 831-874 1.000000 41.9 rps15-ycf1_p3 rps15-ycf1 3 TCAACAGAACCCTTGTTTTCT TGGCCCAATTACCGATTAGA 21 20 38.1 45.0 55.5 56.3 0.0 0.0 5.161573 135879 136515 828-871 1.000000 41.9 rps15-ycf1_p4 rps15-ycf1 4 TCAACAGAACCCTTGTTTTCTTC GCTTGTCTGAATCGCTATTGG 23 21 39.1 47.6 57.4 57.4 0.0 0.0 5.175493 135879 136515 801-844 1.000000 41.9 rps15-ycf1_p5 rps15-ycf1 5 CAACAGAACCCTTGTTTTCTTCT GCTTGTCTGAATCGCTATTGG 23 21 39.1 47.6 57.4 57.4 0.0 0.0 5.181734 135879 136515 800-843 1.000000 41.9