primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnV-UAC-rps16_p1 trnV-UAC-rps16 1 TAGGCTACAAATGGACCCCA CCACCGAGATTGTTCACGAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.036117 10999 12120 640-1683 0.306122 64.0 trnV-UAC-rps16_p2 trnV-UAC-rps16 2 AGCTTGACTTTTGGTTCGGT CCACCGAGATTGTTCACGAT 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.062927 10999 12120 678-1722 0.306122 63.7 trnV-UAC-rps16_p3 trnV-UAC-rps16 3 GGTTCGAATCCGTATAGCCC CCACCGAGATTGTTCACGAT 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.086124 10999 12120 188-1231 0.306122 63.6 trnV-UAC-rps16_p4 trnV-UAC-rps16 4 TAGGCTACAAATGGACCCCA GGGCTGTGTGAGAAACTTCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.058653 10999 12120 1506-1651 0.265306 55.8 trnV-UAC-rps16_p5 trnV-UAC-rps16 5 AGCTTGACTTTTGGTTCGGT GGGCTGTGTGAGAAACTTCA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.085464 10999 12120 1545-1690 0.265306 55.7 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 ACGGAAAGAGAGGGATTCGA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.2 55.5 0.0 0.0 3.687191 14732 15740 550-1151 1.000000 62.5 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 ACGGAAAGAGAGGGATTCGA AGAACGAATCACACTTTTACCAC 20 23 50.0 39.1 58.2 57.3 0.0 0.0 3.819906 14732 15740 553-1154 1.000000 61.4 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ACGGAAAGAGAGGGATTCGA GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.2 57.3 0.0 0.0 3.819906 14732 15740 552-1153 1.000000 61.4 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 ACGGAAAGAGAGGGATTCGA AACGAATCACACTTTTACCACT 20 22 50.0 36.4 58.2 56.2 0.0 0.0 3.927661 14732 15740 551-1152 1.000000 60.6 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 ACGGAAAGAGAGGGATTCGA TACCACTAAACTATACCCGC 20 20 50.0 45.0 58.2 54.0 0.0 0.0 4.162424 14732 15740 536-1137 1.000000 58.7 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CGAGCCCATATCCTTGCTTT TTGTTGTTGATCAGGCGACA 20 20 50.0 45.0 58.0 58.0 0.0 14.7 0.066711 34472 35712 1797-1878 0.877551 86.6 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CCCTTAGGGTCCAACTCTGA AGAATCCTTCCTTGGAGCCT 20 20 55.0 50.0 58.0 58.0 9.6 0.0 0.069017 34472 35712 1915-1976 0.448980 69.4 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TCCCTTAGGGTCCAACTCTG AGAATCCTTCCTTGGAGCCT 20 20 55.0 50.0 58.0 58.0 18.0 0.0 0.069017 34472 35712 1916-1977 0.448980 69.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CCGGGGCTTTGCAATATTTG AGAATCCTTCCTTGGAGCCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.083013 34472 35712 1882-1943 0.448980 69.3 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 CGAGCCCATATCCTTGCTTT AGAATCCTTCCTTGGAGCCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048767 34472 35712 2002-2063 0.428571 68.8 trnC-GCA-petN_p1 trnC-GCA-petN 1 GGGGGACTGCAAATCCTTTT TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.4 58.0 14.7 0.0 0.361535 35784 36654 792-975 1.000000 89.1 trnC-GCA-petN_p2 trnC-GCA-petN 2 AGTTCAAATCTGGGTGTCGC TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.5 58.0 0.0 0.0 0.482286 35784 36654 767-950 1.000000 88.1 trnC-GCA-petN_p3 trnC-GCA-petN 3 GGGGGACTGCAAATCCTTTT CAGCCCAAGCAAGACTTACT 20 20 50.0 50.0 58.4 57.8 14.7 0.0 0.546619 35784 36654 786-969 0.979592 86.8 trnC-GCA-petN_p4 trnC-GCA-petN 4 AGTTCAAATCTGGGTGTCGC CAGCCCAAGCAAGACTTACT 20 20 50.0 50.0 58.5 57.8 0.0 0.0 0.667370 35784 36654 761-944 0.979592 85.8 trnC-GCA-petN_p5 trnC-GCA-petN 5 TTCAAATCTGGGTGTCGCC TTAAAGCAGCCCAAGCAAGA 19 20 52.6 45.0 58.1 58.0 0.0 0.0 1.064834 35784 36654 765-948 1.000000 83.5 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GCTGCCTCCTTGAAAGAGAG TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.366926 39772 40336 382-641 1.000000 89.1 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TGTCCTGAACCACTAGACGA TACCGCTGAGTTAAAAGGGC 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.385076 39772 40336 361-620 1.000000 88.9 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 CCTGAACCACTAGACGATGG TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 57.4 57.9 0.0 0.0 0.689795 39772 40336 358-617 1.000000 86.5 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 CTGAACCACTAGACGATGGG TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 57.4 57.9 0.0 0.0 0.689795 39772 40336 357-616 1.000000 86.5 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 TGAACCACTAGACGATGGGG TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 58.8 57.9 0.0 0.0 0.912002 39772 40336 356-615 1.000000 84.7 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTTCAAATCCGATAAGGGGCT TCTACCAAGGGCTATTGTCA 21 20 47.6 45.0 58.1 55.5 0.0 0.0 3.530679 40409 41309 927-964 0.979592 62.9 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TTCAAATCCGATAAGGGGCT TCTACCAAGGGCTATTGTCA 20 20 45.0 45.0 56.6 55.5 0.0 0.0 3.881618 40409 41309 926-963 0.979592 60.1 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GTTCAAATCCGATAAGGGGC TCTACCAAGGGCTATTGTCA 20 20 50.0 45.0 56.6 55.5 0.0 0.0 3.907014 40409 41309 927-964 0.979592 59.9 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTTCAAATCCGATAAGGGGCT ATCTACCAAGGGCTATTGTCA 21 21 47.6 42.9 58.1 56.1 0.0 0.0 3.947770 40409 41309 928-965 0.979592 59.6 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GTTCAAATCCGATAAGGGGCT TCTACCAAGGGCTATTGTCAT 21 21 47.6 42.9 58.1 56.1 0.0 0.0 3.947770 40409 41309 927-964 0.979592 59.6 psaA-pafI_p1 psaA-pafI 1 ATGCCACTCAGCCAAAGAAA GTTGAAGATCACGAGACGCT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.016379 50304 50932 819-936 0.979592 91.1 psaA-pafI_p2 psaA-pafI 2 TGCCACTCAGCCAAAGAAAT GTTGAAGATCACGAGACGCT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.016379 50304 50932 818-935 0.979592 91.1 psaA-pafI_p3 psaA-pafI 3 GCTGGGTCCAATGTGAGTAG GTTGAAGATCACGAGACGCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.045866 50304 50932 889-1006 0.959184 90.0 psaA-pafI_p4 psaA-pafI 4 ATGCCACTCAGCCAAAGAAA AACCCACCTATTCTGACCGA 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.053367 50304 50932 961-1078 0.918367 88.3 psaA-pafI_p5 psaA-pafI 5 TGCCACTCAGCCAAAGAAAT AACCCACCTATTCTGACCGA 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.053367 50304 50932 960-1077 0.918367 88.3 pafI-trnS-GGA_p1 pafI-trnS-GGA 1 CCATTTATCCGTGATCTAGGCA GACCGCTCGGCCATCTCTC 22 19 45.5 68.4 57.7 62.5 0.0 8.4 7.764006 52970 54355 318-1947 0.918367 48.7 pafI-trnS-GGA_p2 pafI-trnS-GGA 2 CCATTTATCCGTGATCTAGGCA ACCGCTCGGCCATCTCTC 22 18 45.5 66.7 57.7 61.5 0.0 8.4 7.803851 52970 54355 317-1946 0.918367 48.7 pafI-trnS-GGA_p3 pafI-trnS-GGA 3 CCATTTATCCGTGATCTAGGCA GACCGCTCGGCCATCTCT 22 18 45.5 66.7 57.7 61.5 0.0 8.4 7.803851 52970 54355 318-1947 0.918367 48.7 pafI-trnS-GGA_p4 pafI-trnS-GGA 4 TCCATTTATCCGTGATCTAGGC GACCGCTCGGCCATCTCTC 22 19 45.5 68.4 57.5 62.5 0.0 8.4 8.029445 52970 54355 319-1948 0.918367 48.7 pafI-trnS-GGA_p5 pafI-trnS-GGA 5 TCCATTTATCCGTGATCTAGGC ACCGCTCGGCCATCTCTC 22 18 45.5 66.7 57.5 61.5 0.0 8.4 8.069290 52970 54355 318-1947 0.918367 48.7 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 55770 56436 681-771 1.000000 90.9 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 55770 56436 689-779 1.000000 90.4 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 55770 56436 713-803 1.000000 90.0 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 55770 56436 721-811 1.000000 89.5 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 55770 56436 695-785 1.000000 89.0 ndhC-psaI_p1 ndhC-psaI 1 GAAACTCATCGCCCATGGAT CGGAACTACTAGGCCCACTA 20 20 50.0 55.0 58.0 57.9 15.2 0.0 0.090098 59757 62022 919-2963 0.693878 79.0 ndhC-psaI_p2 ndhC-psaI 2 GAAACTCATCGCCCATGGAT CGGTTTCATACATCTGCGGA 20 20 50.0 50.0 58.0 58.1 15.2 0.0 0.092539 59757 62022 1390-2957 0.326531 64.3 ndhC-psaI_p3 ndhC-psaI 3 GAAACTCATCGCCCATGGAT TCGGTTTCATACATCTGCGG 20 20 50.0 50.0 58.0 58.1 15.2 0.0 0.092539 59757 62022 1391-2958 0.326531 64.3 ndhC-psaI_p4 ndhC-psaI 4 CTGTGCCGGCTGTTAAAATG CGGAACTACTAGGCCCACTA 20 20 50.0 55.0 58.0 57.9 29.7 0.0 0.081717 59757 62022 1324-2991 0.306122 63.6 ndhC-psaI_p5 ndhC-psaI 5 GCTAGAAAGCTTCTCCGTCC GTTTTTCGAGACCCCGCTAT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.090717 59757 62022 1529-2995 0.102041 55.4 psbE-petL_p1 psbE-petL 1 CATTGCGGATATTGACCCCA AGAACGTGGGTCTCCAAAAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.056973 67746 68975 2019-2199 0.979592 90.7 psbE-petL_p2 psbE-petL 2 TCGTTCGGGTTTGATTGTGT AGCGCTCTTAGTTCAGTTCG 20 20 45.0 50.0 58.0 58.0 0.0 2.6 0.059731 67746 68975 2108-2288 0.836735 85.0 psbE-petL_p3 psbE-petL 3 CATTGCGGATATTGACCCCA AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 58.0 58.0 0.0 2.6 0.036173 67746 68975 2041-2221 0.816327 84.4 psbE-petL_p4 psbE-petL 4 ATGGAATTCCTTGTCGGCTC AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 58.0 58.0 24.7 2.6 0.060150 67746 68975 1871-2051 0.816327 84.2 psbE-petL_p5 psbE-petL 5 CAACCCGCAATGAATAGGGA AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 57.9 58.0 6.4 2.6 0.067362 67746 68975 1782-1958 0.714286 80.0 clpP1_p1 clpP1 1 TCAACAATTGGTGGCATGGA GTATCAATCCGCAATGCAGC 20 20 45.0 50.0 58.0 58.0 23.0 5.9 0.048909 73601 75835 2786-2833 0.285714 63.0 clpP1_p2 clpP1 2 AACAATTGGTGGCATGGACT GTATCAATCCGCAATGCAGC 20 20 45.0 50.0 58.0 58.0 10.8 5.9 0.056114 73601 75835 2784-2831 0.285714 63.0 clpP1_p3 clpP1 3 TCAACAATTGGTGGCATGGA TTTTCTACGGGCCAATGCTT 20 20 45.0 45.0 58.0 58.1 23.0 4.4 0.088933 73601 75835 2751-2977 0.285714 62.7 clpP1_p4 clpP1 4 TACAAGGGGGAAGGTAAGGG GTATCAATCCGCAATGCAGC 20 20 55.0 50.0 58.0 58.0 0.0 5.9 0.066633 73601 75835 2581-2619 0.244898 57.0 clpP1_p5 clpP1 5 ATTTGCCCCTGGTTCCATTT GTATCAATCCGCAATGCAGC 20 20 45.0 50.0 58.0 58.0 0.0 5.9 0.085411 73601 75835 2819-2857 0.204082 52.7 ndhF-rpl32_p1 ndhF-rpl32 1 TGATCCATGCATATTGATATGT GTACGTTTCTTTGGAACCGC 22 20 31.8 50.0 53.1 57.7 0.0 0.0 7.165997 117770 120308 1987-2739 0.346939 25.9 ndhF-rpl32_p2 ndhF-rpl32 2 ATGATCCATGCATATTGATATGT GTACGTTTCTTTGGAACCGC 23 20 30.4 50.0 53.8 57.7 0.0 0.0 7.537749 117770 120308 1988-2740 0.346939 25.9 ndhF-rpl32_p3 ndhF-rpl32 3 TGCATATTGATATGTATGTTCCA GTACGTTTCTTTGGAACCGC 23 20 30.4 50.0 53.7 57.7 11.5 0.0 7.629713 117770 120308 1980-2732 0.346939 25.9 ndhF-rpl32_p4 ndhF-rpl32 4 TGATCCATGCATATTGATATGT TACGTTTCTTTGGAACCGCC 22 20 31.8 50.0 53.1 58.8 0.0 0.0 7.632212 117770 120308 1986-2738 0.346939 25.9 ndhF-rpl32_p5 ndhF-rpl32 5 ATGATCCATGCATATTGATATGT TACGTTTCTTTGGAACCGCC 23 20 30.4 50.0 53.8 58.8 0.0 0.0 8.003964 117770 120308 1987-2739 0.346939 25.9 ndhD_p1 ndhD 1 CGCAAATGAAAGAGGCAGTG CCGCTATCATGAGCAGATCC 20 20 50.0 55.0 58.0 58.0 0.0 10.5 0.034222 122626 124134 1814-2656 1.000000 91.7 ndhD_p2 ndhD 2 CGCAATTGTGGCTTCTCTTG CCGCTATCATGAGCAGATCC 20 20 50.0 55.0 58.0 58.0 11.3 10.5 0.034222 122626 124134 1529-2371 1.000000 91.7 ndhD_p3 ndhD 3 CGCAAATGAAAGAGGCAGTG AATTGCTTCTGCCCCAAGAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.040871 122626 124134 1557-2399 0.979592 90.9 ndhD_p4 ndhD 4 CGCAATTGTGGCTTCTCTTG AAATTGCTTCTGCCCCAAGA 20 20 50.0 45.0 58.0 58.0 11.3 0.0 0.040871 122626 124134 1273-2115 0.979592 90.9 ndhD_p5 ndhD 5 CGCAATTGTGGCTTCTCTTG AATTGCTTCTGCCCCAAGAA 20 20 50.0 45.0 58.0 58.0 11.3 0.0 0.040871 122626 124134 1272-2114 0.979592 90.9 ycf1-rps15_p1 ycf1-rps15 1 TCCACGCTTGAGAATTGGTT CGTTTTCCCCGATTCAGGAT 20 20 45.0 50.0 57.7 58.0 0.0 0.0 0.308739 147378 149779 795-2813 0.285714 55.0 ycf1-rps15_p2 ycf1-rps15 2 CCACGCTTGAGAATTGGTTG CGTTTTCCCCGATTCAGGAT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.374941 147378 149779 794-2812 0.285714 54.4 ycf1-rps15_p3 ycf1-rps15 3 TCCACGCTTGAGAATTGGTT TTCCCCGATTCAGGATCAGT 20 20 45.0 50.0 57.7 58.1 0.0 0.0 0.390777 147378 149779 791-2809 0.285714 54.3 ycf1-rps15_p4 ycf1-rps15 4 CCACGCTTGAGAATTGGTTG TTCCCCGATTCAGGATCAGT 20 20 50.0 50.0 57.7 58.1 0.0 0.0 0.456980 147378 149779 790-2808 0.285714 53.8 ycf1-rps15_p5 ycf1-rps15 5 TCCACGCTTGAGAATTGGTT ATGCATTGATGGGTGGTGAG 20 20 45.0 50.0 57.7 58.2 0.0 0.0 0.498787 147378 149779 867-2885 0.285714 53.3 ndhD_p1 ndhD 1 CCGCTATCATGAGCAGATCC CGCAAATGAAAGAGGCAGTG 20 20 55.0 50.0 58.0 58.0 10.5 0.0 0.034222 156155 157663 1814-2656 0.979592 90.9 ndhD_p2 ndhD 2 CCGCTATCATGAGCAGATCC CGCAATTGTGGCTTCTCTTG 20 20 55.0 50.0 58.0 58.0 10.5 11.3 0.034222 156155 157663 1529-2371 0.979592 90.9 ndhD_p3 ndhD 3 AAATTGCTTCTGCCCCAAGA CGCAATTGTGGCTTCTCTTG 20 20 45.0 50.0 58.0 58.0 0.0 11.3 0.040871 156155 157663 1273-2115 0.959184 90.0 ndhD_p4 ndhD 4 AATTGCTTCTGCCCCAAGAA CGCAAATGAAAGAGGCAGTG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.040871 156155 157663 1557-2399 0.959184 90.0 ndhD_p5 ndhD 5 AATTGCTTCTGCCCCAAGAA CGCAATTGTGGCTTCTCTTG 20 20 45.0 50.0 58.0 58.0 0.0 11.3 0.040871 156155 157663 1272-2114 0.959184 90.0 rpl32-ndhF_p1 rpl32-ndhF 1 GTACGTTTCTTTGGAACCGC TGATCCATGCATATTGATATGT 20 22 50.0 31.8 57.7 53.1 0.0 0.0 7.165997 159981 162519 1987-2739 0.346939 25.9 rpl32-ndhF_p2 rpl32-ndhF 2 GTACGTTTCTTTGGAACCGC ATGATCCATGCATATTGATATGT 20 23 50.0 30.4 57.7 53.8 0.0 0.0 7.537749 159981 162519 1988-2740 0.346939 25.9 rpl32-ndhF_p3 rpl32-ndhF 3 GTACGTTTCTTTGGAACCGC TGCATATTGATATGTATGTTCCA 20 23 50.0 30.4 57.7 53.7 0.0 11.5 7.629713 159981 162519 1980-2732 0.346939 25.9 rpl32-ndhF_p4 rpl32-ndhF 4 TACGTTTCTTTGGAACCGCC TGATCCATGCATATTGATATGT 20 22 50.0 31.8 58.8 53.1 0.0 0.0 7.632212 159981 162519 1986-2738 0.346939 25.9 rpl32-ndhF_p5 rpl32-ndhF 5 TACGTTTCTTTGGAACCGCC ATGATCCATGCATATTGATATGT 20 23 50.0 30.4 58.8 53.8 0.0 0.0 8.003964 159981 162519 1987-2739 0.346939 25.9