primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ccs1_p1 ccs1 1 TCCACTGCTCTACCAACTGA AGAGCATATTTTAACTACACGACT 20 24 50.0 33.3 58.0 56.0 0.0 0.0 6.036226 3430 4737 1438-1438 1.000000 40.1 ccs1_p2 ccs1 2 TCCCGGCTTGTTTGCTTATT AGAGCATATTTTAACTACACGACT 20 24 45.0 33.3 58.1 56.0 0.0 0.0 6.108673 3430 4737 1414-1414 1.000000 40.1 ccs1_p3 ccs1 3 ATCCCGGCTTGTTTGCTTAT AGAGCATATTTTAACTACACGACT 20 24 45.0 33.3 57.9 56.0 0.0 0.0 6.170420 3430 4737 1415-1415 1.000000 40.1 ccs1_p4 ccs1 4 TCCACTGCTCTACCAACTGA AGAGCATATTTTAACTACACGACTT 20 25 50.0 32.0 58.0 56.6 0.0 0.0 6.384724 3430 4737 1438-1438 1.000000 40.1 ccs1_p5 ccs1 5 CCACTGCTCTACCAACTGAG AGAGCATATTTTAACTACACGACT 20 24 55.0 33.3 57.6 56.0 0.0 0.0 6.403353 3430 4737 1437-1437 1.000000 40.1 ycf55_p1 ycf55 1 AGGCCATAAATCACCACAGC ACGTAAAGCCTATTTGAACCTCT 20 23 50.0 39.1 58.2 57.8 5.0 0.0 3.394185 5916 6635 800-800 1.000000 52.9 ycf55_p2 ycf55 2 GGCCATAAATCACCACAGCT ACGTAAAGCCTATTTGAACCTCT 20 23 50.0 39.1 58.2 57.8 0.0 0.0 3.394185 5916 6635 799-799 1.000000 52.9 ycf55_p3 ycf55 3 AGGCCATAAATCACCACAGC ACGTAAAGCCTATTTGAACCTC 20 22 50.0 40.9 58.2 56.4 5.0 0.0 3.787521 5916 6635 800-800 1.000000 49.8 ycf55_p4 ycf55 4 GGCCATAAATCACCACAGCT ACGTAAAGCCTATTTGAACCTC 20 22 50.0 40.9 58.2 56.4 0.0 0.0 3.787521 5916 6635 799-799 1.000000 49.8 ycf55_p5 ycf55 5 GGCCATAAATCACCACAGCT ACGTAAAGCCTATTTGAACCT 20 21 50.0 38.1 58.2 55.2 0.0 0.0 4.010915 5916 6635 799-799 1.000000 48.0 trg1_p1 trg1 1 ATTTCTTCCGAAGCACCGAT TATGCAAAGACTCGAGACGG 20 20 45.0 50.0 57.6 57.4 3.0 21.7 0.964985 7884 8603 781-781 1.000000 72.4 trg1_p2 trg1 2 ACGTACCATTTTGCCCAGAT TATGCAAAGACTCGAGACGG 20 20 45.0 50.0 57.5 57.4 0.0 21.7 1.069140 7884 8603 855-855 1.000000 71.5 trg1_p3 trg1 3 TCTTCCGAAGCACCGATAAG TATGCAAAGACTCGAGACGG 20 20 50.0 50.0 57.4 57.4 3.0 21.7 1.140940 7884 8603 778-778 1.000000 71.0 trg1_p4 trg1 4 ATTTCTTCCGAAGCACCGAT TTATGCAAAGACTCGAGACGG 20 21 45.0 47.6 57.6 58.1 3.0 21.7 1.527160 7884 8603 782-782 1.000000 67.9 trg1_p5 trg1 5 TTCTTCCGAAGCACCGATAA TATGCAAAGACTCGAGACGG 20 20 45.0 50.0 57.0 57.4 3.0 21.7 1.604307 7884 8603 779-779 1.000000 67.3 rpoB_p1 rpoB 1 TACCACTGCTATACCCGGAG TACCAACTAGAGGCCTCTGG 20 20 55.0 55.0 58.0 57.8 0.7 40.2 0.169600 10414 10533 228-228 1.000000 79.7 rpoB_p2 rpoB 2 ACGTCAATCTGTACCACTGC TACCAACTAGAGGCCTCTGG 20 20 50.0 55.0 57.9 57.8 0.0 40.2 0.241007 10414 10533 239-239 1.000000 79.1 rpoB_p3 rpoB 3 CTTAGAACACGATGACGCGA TACCAACTAGAGGCCTCTGG 20 20 50.0 55.0 58.1 57.8 15.9 40.2 0.269542 10414 10533 287-287 1.000000 78.7 rpoB_p4 rpoB 4 TCTTAGAACACGATGACGCG TACCAACTAGAGGCCTCTGG 20 20 50.0 55.0 58.1 57.8 3.5 40.2 0.269542 10414 10533 288-288 1.000000 78.7 rpoB_p5 rpoB 5 TGGGCTCAAATATGCAACGT TACCAACTAGAGGCCTCTGG 20 20 45.0 55.0 58.2 57.8 0.0 40.2 0.327837 10414 10533 255-255 1.000000 78.3 atpI_p1 atpI 1 GCACTATTCACGCCGAACTA TGTGCGACTTGTGGAAAAGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.113986 19670 20371 1152-1152 1.000000 79.2 atpI_p2 atpI 2 GCACTATTCACGCCGAACTA AACAGAAGCAGCTGAAACGA 20 20 50.0 45.0 58.1 58.0 0.0 20.4 0.129168 19670 20371 879-879 1.000000 79.1 atpI_p3 atpI 3 TGCTTATGACCCACGAGTTG TGTGCGACTTGTGGAAAAGA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.124565 19670 20371 1810-1810 1.000000 79.0 atpI_p4 atpI 4 GCTTATGACCCACGAGTTGT TGTGCGACTTGTGGAAAAGA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.126021 19670 20371 1809-1809 1.000000 79.0 atpI_p5 atpI 5 GCACTATTCACGCCGAACTA TAACGGATTGCGCATTAGCT 20 20 50.0 45.0 58.1 58.1 0.0 12.8 0.134623 19670 20371 1483-1483 1.000000 79.0 ccsA_p1 ccsA 1 CTTTGCTCCTGGTTGTAGCA TGAACAGGAAGAAGTAATCTAGACT 20 25 50.0 36.0 58.1 57.0 3.9 0.0 6.125191 43440 44393 1116-1116 1.000000 40.1 ccsA_p2 ccsA 2 TCTTTGCTCCTGGTTGTAGC TGAACAGGAAGAAGTAATCTAGACT 20 25 50.0 36.0 57.8 57.0 0.0 0.0 6.206415 43440 44393 1117-1117 1.000000 40.1 ccsA_p3 ccsA 3 CTTTGCTCCTGGTTGTAGCA AGGAAGAAGTAATCTAGACTAGACCT 20 26 50.0 38.5 58.1 57.9 3.9 14.5 6.213340 43440 44393 1111-1111 1.000000 40.1 ccsA_p4 ccsA 4 TGGATCTTTGCTCCTGGTTG TGAACAGGAAGAAGTAATCTAGACT 20 25 50.0 36.0 57.8 57.0 0.0 0.0 6.226433 43440 44393 1121-1121 1.000000 40.1 ccsA_p5 ccsA 5 GGATCTTTGCTCCTGGTTGT TGAACAGGAAGAAGTAATCTAGACT 20 25 50.0 36.0 57.8 57.0 0.0 0.0 6.227987 43440 44393 1120-1120 1.000000 40.1 psbA_p1 psbA 1 AAAAACAGAAGGCTTAGAGC CCTGGGAGGTTTTCAAGACC 20 20 40.0 55.0 53.8 58.1 0.0 0.0 4.287015 45077 46159 1186-1186 1.000000 46.0 psbA_p2 psbA 2 GCTTAGAGCCTTCTGTTTTT CCTGGGAGGTTTTCAAGACC 20 20 40.0 55.0 53.8 58.1 0.0 0.0 4.287015 45077 46159 1175-1175 1.000000 46.0 psbA_p3 psbA 3 AAAAACAGAAGGCTTAGAGC CTGGGAGGTTTTCAAGACCA 20 20 40.0 50.0 53.8 57.3 0.0 0.0 4.855020 45077 46159 1185-1185 1.000000 41.4 psbA_p4 psbA 4 GCTTAGAGCCTTCTGTTTTT CTGGGAGGTTTTCAAGACCA 20 20 40.0 50.0 53.8 57.3 0.0 0.0 4.855020 45077 46159 1174-1174 1.000000 41.4 psbA_p5 psbA 5 GCTTAGAGCCTTCTGTTTTT TCCTGGGAGGTTTTCAAGAC 20 20 40.0 50.0 53.8 57.0 0.0 0.0 5.149302 45077 46159 1176-1176 1.000000 40.3 psbA-rps6_p1 psbA-rps6 1 AAGTGATCCATGCGCAGAAT CAGAGCTTCAACGAGACGAA 20 20 45.0 50.0 58.0 57.9 18.3 0.0 0.100323 46160 46605 602-603 1.000000 79.7 psbA-rps6_p2 psbA-rps6 2 AGTGATCCATGCGCAGAATT CAGAGCTTCAACGAGACGAA 20 20 45.0 50.0 58.0 57.9 18.3 0.0 0.100323 46160 46605 601-602 1.000000 79.7 psbA-rps6_p3 psbA-rps6 3 GTGATCCATGCGCAGAATTG CAGAGCTTCAACGAGACGAA 20 20 50.0 50.0 57.9 57.9 18.3 0.0 0.167227 46160 46605 600-601 1.000000 79.2 psbA-rps6_p4 psbA-rps6 4 CAGAATTGCTCCCAGAAGCT CAGAGCTTCAACGAGACGAA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.177652 46160 46605 588-589 1.000000 79.1 psbA-rps6_p5 psbA-rps6 5 ACAACCGAACCAACCAATGT CAGAGCTTCAACGAGACGAA 20 20 45.0 50.0 58.2 57.9 0.0 0.0 0.281584 46160 46605 640-641 1.000000 78.2 psbJ-trnE_p1 psbJ-trnE 1 TCCTCTTTGGATGGTGGCTA AGGCCTAGGACATTTCCCTT 20 20 50.0 50.0 58.0 58.0 0.0 19.5 0.047506 50198 50371 332-332 1.000000 80.3 psbJ-trnE_p2 psbJ-trnE 2 CCTCTTTGGATGGTGGCTAC AGGCCTAGGACATTTCCCTT 20 20 55.0 50.0 58.0 58.0 0.0 19.5 0.057043 50198 50371 331-331 1.000000 80.3 psbJ-trnE_p3 psbJ-trnE 3 CTTGCCGCCCTAGGTTTATT AGGCCTAGGACATTTCCCTT 20 20 50.0 50.0 57.9 58.0 8.3 19.5 0.065703 50198 50371 301-301 1.000000 80.3 psbJ-trnE_p4 psbJ-trnE 4 ATTCCTCTTTGGATGGTGGC AGGCCTAGGACATTTCCCTT 20 20 50.0 50.0 57.9 58.0 0.0 19.5 0.162893 50198 50371 334-334 1.000000 79.4 psbJ-trnE_p5 psbJ-trnE 5 TCCTCTTTGGATGGTGGCTA TTACTTGCCCCCATCGTCTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.165873 50198 50371 353-353 1.000000 79.4 ycf80-trnM_p1 ycf80-trnM 1 CCGACAATTACAGGACAGGA CAGCGTTGTCTCTGTGAGAA 20 20 50.0 50.0 56.9 57.9 0.0 0.0 1.190974 56820 57217 579-579 1.000000 70.7 ycf80-trnM_p2 ycf80-trnM 2 TCCGACAATTACAGGACAGG CAGCGTTGTCTCTGTGAGAA 20 20 50.0 50.0 56.9 57.9 0.0 0.0 1.190974 56820 57217 580-580 1.000000 70.7 ycf80-trnM_p3 ycf80-trnM 3 CCGACAATTACAGGACAGGA TATGCATCTGGCTGGATTCG 20 20 50.0 50.0 56.9 57.8 0.0 0.2 1.225273 56820 57217 602-602 1.000000 70.5 ycf80-trnM_p4 ycf80-trnM 4 TCCGACAATTACAGGACAGG TATGCATCTGGCTGGATTCG 20 20 50.0 50.0 56.9 57.8 0.0 0.2 1.225273 56820 57217 603-603 1.000000 70.5 ycf80-trnM_p5 ycf80-trnM 5 CCGACAATTACAGGACAGGAA CAGCGTTGTCTCTGTGAGAA 21 20 47.6 50.0 57.7 57.9 0.0 0.0 1.468446 56820 57217 579-579 1.000000 68.5 petD-petB_p1 petD-petB 1 CATGCAGGCTCACCGTAATA TTTACCTGTGGTAGCAGCAG 20 20 50.0 50.0 57.8 57.5 0.0 14.0 0.711637 63121 63198 252-252 1.000000 74.9 petD-petB_p2 petD-petB 2 CATGCAGGCTCACCGTAATA TACCTGTGGTAGCAGCAGTT 20 20 50.0 50.0 57.8 58.7 0.0 17.4 0.890878 63121 63198 250-250 1.000000 73.5 petD-petB_p3 petD-petB 3 CATGCAGGCTCACCGTAATA TTACCTGTGGTAGCAGCAGT 20 20 50.0 50.0 57.8 58.7 0.0 17.4 0.890878 63121 63198 251-251 1.000000 73.5 petD-petB_p4 petD-petB 4 AGATCATTTGGCCATGCAGG TTTACCTGTGGTAGCAGCAG 20 20 50.0 50.0 58.6 57.5 6.1 14.0 1.062691 63121 63198 264-264 1.000000 72.1 petD-petB_p5 petD-petB 5 CATGCAGGCTCACCGTAATA TTTTACCTGTGGTAGCAGCA 20 20 50.0 45.0 57.8 57.1 0.0 0.0 1.179936 63121 63198 253-253 1.000000 71.2 ycf46-ycf24_p1 ycf46-ycf24 1 TGCGCAATACCTCATCAAGT TGCATCTGAAGCAGATCGTC 20 20 45.0 50.0 57.6 58.1 8.2 3.1 0.469677 71654 71708 218-218 1.000000 77.0 ycf46-ycf24_p2 ycf46-ycf24 2 TGCGCAATACCTCATCAAGT GCATCTGAAGCAGATCGTCT 20 20 45.0 50.0 57.6 57.8 8.2 6.9 0.623590 71654 71708 217-217 1.000000 75.7 ycf46-ycf24_p3 ycf46-ycf24 3 TGCGCAATACCTCATCAAGT TTGCATCTGAAGCAGATCGT 20 20 45.0 45.0 57.6 57.6 8.2 7.7 0.793199 71654 71708 219-219 1.000000 74.4 ycf46-ycf24_p4 ycf46-ycf24 4 TTGCGCAATACCTCATCAAGT TGCATCTGAAGCAGATCGTC 21 20 42.9 50.0 58.3 58.1 21.0 3.1 1.357717 71654 71708 219-219 1.000000 69.9 ycf46-ycf24_p5 ycf46-ycf24 5 TGCGCAATACCTCATCAAGT GTTTGCATCTGAAGCAGATCG 20 21 45.0 47.6 57.6 58.0 8.2 7.7 1.450525 71654 71708 221-221 1.000000 69.1 tatC-groEL_p1 tatC-groEL 1 GCCATTTCATCCCCTTCAGT TCGACACTTCAAAATGCAGC 20 20 50.0 45.0 57.9 57.3 0.0 0.0 0.836531 76380 76424 224-224 1.000000 73.7 tatC-groEL_p2 tatC-groEL 2 GCCATTTCATCCCCTTCAGT CGACACTTCAAAATGCAGCT 20 20 50.0 45.0 57.9 57.3 0.0 0.0 0.843770 76380 76424 223-223 1.000000 73.6 tatC-groEL_p3 tatC-groEL 3 ATCCCCTTCAGTATCCAGCA TCGACACTTCAAAATGCAGC 20 20 50.0 45.0 57.8 57.3 0.0 0.0 0.883300 76380 76424 216-216 1.000000 73.3 tatC-groEL_p4 tatC-groEL 4 TCCCCTTCAGTATCCAGCAT TCGACACTTCAAAATGCAGC 20 20 50.0 45.0 57.8 57.3 0.0 0.0 0.883300 76380 76424 215-215 1.000000 73.3 tatC-groEL_p5 tatC-groEL 5 TCCCCTTCAGTATCCAGCAT CGACACTTCAAAATGCAGCT 20 20 50.0 45.0 57.8 57.3 0.0 0.0 0.890540 76380 76424 214-214 1.000000 73.2 groEL_p1 groEL 1 GCGGGTGCTTGAAAAACTTT GACTCATAAGCCCAAGGTCG 20 20 45.0 55.0 58.1 58.1 0.0 0.0 0.124086 76425 78029 1991-1991 1.000000 79.3 groEL_p2 groEL 2 ATTCTCCGGGTGCAAATTGT GACTCATAAGCCCAAGGTCG 20 20 45.0 55.0 58.1 58.1 0.0 0.0 0.135319 76425 78029 2029-2029 1.000000 79.2 groEL_p3 groEL 3 GCGGGTGCTTGAAAAACTTT GATTGGGTCAACTGGGACTC 20 20 45.0 55.0 58.1 57.9 0.0 0.0 0.180754 76425 78029 2414-2414 1.000000 78.8 groEL_p4 groEL 4 ATTCTCCGGGTGCAAATTGT GATTGGGTCAACTGGGACTC 20 20 45.0 55.0 58.1 57.9 0.0 0.0 0.191987 76425 78029 2452-2452 1.000000 78.7 groEL_p5 groEL 5 ATTGCGGGTGCTTGAAAAAC GACTCATAAGCCCAAGGTCG 20 20 45.0 55.0 58.1 58.1 0.0 0.0 0.194110 76425 78029 1994-1994 1.000000 78.7 psbB_p1 psbB 1 AGTCCCTATTAGCAGAAAAGTGT AAACAGCGTAAGAAAGTCAA 23 20 39.1 35.0 57.2 53.4 0.0 0.0 8.369974 85109 86638 1660-1660 1.000000 40.1 psbB_p2 psbB 2 AGTCCCTATTAGCAGAAAAGTGT AACAGCGTAAGAAAGTCAAA 23 20 39.1 35.0 57.2 53.4 0.0 0.0 8.369974 85109 86638 1659-1659 1.000000 40.1 psbB_p3 psbB 3 AGTCCCTATTAGCAGAAAAGTGT ACAGCGTAAGAAAGTCAAAA 23 20 39.1 35.0 57.2 53.4 0.0 0.0 8.369974 85109 86638 1658-1658 1.000000 40.1 psbB_p4 psbB 4 AGTCCCTATTAGCAGAAAAGTGT AACAGCGTAAGAAAGTCAAAA 23 21 39.1 33.3 57.2 54.3 0.0 0.0 8.484794 85109 86638 1659-1659 1.000000 40.1 psbB_p5 psbB 5 AGTCCCTATTAGCAGAAAAGTGT ACAGCGTAAGAAAGTCAAAAA 23 21 39.1 33.3 57.2 54.3 0.0 0.0 8.484794 85109 86638 1658-1658 1.000000 40.1 trnW-trnS_p1 trnW-trnS 1 AGTTCGCGCTCTTAGTTCAG ACCCGTGATAGGAGAGGATG 20 20 50.0 55.0 58.0 58.0 5.6 0.0 0.018533 92853 92911 234-234 1.000000 80.2 trnW-trnS_p2 trnW-trnS 2 GGGATAGTTCGCGCTCTTAG ACCCGTGATAGGAGAGGATG 20 20 55.0 55.0 57.9 58.0 5.6 0.0 0.055788 92853 92911 239-239 1.000000 79.9 trnW-trnS_p3 trnW-trnS 3 GCGCTCTTAGTTCAGTTGGT ACCCGTGATAGGAGAGGATG 20 20 50.0 55.0 58.2 58.0 0.0 0.0 0.205481 92853 92911 229-229 1.000000 78.7 trnW-trnS_p4 trnW-trnS 4 GTTCGCGCTCTTAGTTCAGT ACCCGTGATAGGAGAGGATG 20 20 50.0 55.0 58.3 58.0 5.6 0.0 0.303162 92853 92911 233-233 1.000000 77.9 trnW-trnS_p5 trnW-trnS 5 TCGCGCTCTTAGTTCAGTTG ACCCGTGATAGGAGAGGATG 20 20 50.0 55.0 58.3 58.0 5.6 0.0 0.304340 92853 92911 231-231 1.000000 77.9