primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5572 6736 1221-1238 1.000000 83.7 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 5572 6736 1232-1249 1.000000 83.2 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 5572 6736 1225-1242 1.000000 79.0 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 ATCATGTCCTTCAAGTCGCA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.2 58.1 0.0 16.9 0.844354 5572 6736 1233-1250 1.000000 78.7 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CGTTGCTTTCTACCACATCG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.2 58.1 0.0 16.9 0.863824 5572 6736 1213-1230 1.000000 78.6 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 TGATCAGAGAGAGCGGAGAG AAAGTTTTTGGGGACGGGAA 20 20 55.0 45.0 58.0 57.8 0.0 0.0 0.196330 8060 9122 1264-1355 1.000000 80.8 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AAGTGATCAGAGAGAGCGGA AAAGTTTTTGGGGACGGGAA 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.298563 8060 9122 1267-1358 1.000000 79.9 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 AATCTGCCGCTTTAGTCCAC AAAGTTTTTGGGGACGGGAA 20 20 50.0 45.0 58.3 57.8 0.0 0.0 0.423197 8060 9122 1197-1288 1.000000 79.1 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 GATCAGAGAGAGCGGAGAGA AAAGTTTTTGGGGACGGGAA 20 20 55.0 45.0 57.7 57.8 0.0 0.0 0.416810 8060 9122 1263-1354 1.000000 79.0 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 ATCAGAGAGAGCGGAGAGAG AAAGTTTTTGGGGACGGGAA 20 20 55.0 45.0 57.7 57.8 0.0 0.0 0.423108 8060 9122 1262-1353 1.000000 78.9 atpA_p1 atpA 1 TGATCTTGTACTAAGAAATGATCT TTTTCCTTTGTTTCCGAAAAA 24 21 29.2 28.6 53.3 52.9 10.5 0.0 14.804250 10207 11730 1614-1614 0.500000 20.0 atpA_p2 atpA 2 TGATCTTGTACTAAGAAATGATCT TTTTTCCTTTGTTTCCGAAAA 24 21 29.2 28.6 53.3 52.9 10.5 0.0 14.804250 10207 11730 1615-1615 0.500000 20.0 atpA_p3 atpA 3 TGATCTTGTACTAAGAAATGATCT TTTTTCCTTTGTTTCCGAAAAA 24 22 29.2 27.3 53.3 53.8 10.5 0.0 14.929921 10207 11730 1615-1615 0.500000 20.0 atpA_p4 atpA 4 ATGATCTTGTACTAAGAAATGATCT TTTTCCTTTGTTTCCGAAAAA 25 21 28.0 28.6 53.8 52.9 10.5 0.0 15.231285 10207 11730 1615-1615 0.500000 20.0 atpA_p5 atpA 5 ATGATCTTGTACTAAGAAATGATCT TTTTTCCTTTGTTTCCGAAAA 25 21 28.0 28.6 53.8 52.9 10.5 0.0 15.231285 10207 11730 1616-1616 0.500000 20.0 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 CCATTTATCCGGGATCTAGGC ACGGAAAGAGAGGGATTCGA 21 20 52.4 50.0 57.7 58.2 14.0 0.0 1.419371 44170 44717 660-660 1.000000 70.7 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 CCATTTATCCGGGATCTAGGC TTCCAATGCTACGCCTTCAA 21 20 52.4 45.0 57.7 57.8 14.0 0.0 1.460686 44170 44717 609-609 1.000000 70.5 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 CCATTTATCCGGGATCTAGGC AGTTCCAATGCTACGCCTTC 21 20 52.4 50.0 57.7 58.3 14.0 0.0 1.528956 44170 44717 611-611 1.000000 70.0 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 TTCTCCTGAAGTTGTCGGAA ACGGAAAGAGAGGGATTCGA 20 20 45.0 50.0 56.4 58.2 0.0 0.0 1.735519 44170 44717 733-733 1.000000 68.0 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TTTCTCCTGAAGTTGTCGGA ACGGAAAGAGAGGGATTCGA 20 20 45.0 50.0 56.4 58.2 0.0 0.0 1.735519 44170 44717 734-734 1.000000 68.0 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CGTATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 21 20 42.9 50.0 56.9 57.8 0.0 0.0 2.252840 50225 51819 1623-1650 1.000000 67.4 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCGTATTCGTGAAGCAGAAAC AGAAGGTCTACGGTTCGAGT 21 20 42.9 50.0 56.7 57.8 0.0 0.0 2.522275 50225 51819 1624-1651 1.000000 65.2 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TCGTATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 22 20 40.9 50.0 58.4 57.8 0.0 0.0 2.552460 50225 51819 1624-1651 1.000000 65.0 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CGTATTCGTGAAGCAGAAACA GAAGGTCTACGGTTCGAGTC 21 20 42.9 55.0 56.9 57.5 0.0 0.0 2.596612 50225 51819 1622-1649 1.000000 64.7 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CGTATTCGTGAAGCAGAAACA GTTCGAGTCCGTATAGCCCT 21 20 42.9 55.0 56.9 58.7 0.0 0.0 2.738906 50225 51819 1611-1638 1.000000 63.6 accD_p1 accD 1 CTATCCCGCAGTTTCAGACC AAAGAAGCCATTGCAATCGC 20 20 55.0 45.0 58.1 58.0 0.0 19.9 0.059104 57767 59437 2152-2520 1.000000 87.5 accD_p2 accD 2 CTATCCCGCAGTTTCAGACC CCGGGCCTTTTTAACCAGAT 20 20 55.0 50.0 58.1 58.2 0.0 0.8 0.211347 57767 59437 2389-2757 1.000000 86.2 accD_p3 accD 3 GGATCGTTTTCTATCCCGCA AAAGAAGCCATTGCAATCGC 20 20 50.0 45.0 57.8 58.0 0.0 19.9 0.234729 57767 59437 2162-2530 1.000000 86.1 accD_p4 accD 4 ACTCGGCTCAATCCTTTTCC AAAGAAGCCATTGCAATCGC 20 20 50.0 45.0 57.9 58.0 0.0 19.9 0.115772 57767 59437 2736-2736 0.500000 59.1 accD_p5 accD 5 CTATCCCGCAGTTTCAGACC TATTCGCCGGGCCTTTTTAA 20 20 55.0 45.0 58.1 57.9 0.0 14.5 0.184448 57767 59437 2763-2763 0.500000 58.5 ycf4-cemA_p1 ycf4-cemA 1 TGCGCGTACCAATTGAAGTA ATGAGAGAGAGACCCACCAG 20 20 45.0 55.0 57.9 57.8 8.4 0.0 0.239365 60769 61407 647-729 1.000000 84.3 ycf4-cemA_p2 ycf4-cemA 2 CTTGCGCGTACCAATTGAAG ATGAGAGAGAGACCCACCAG 20 20 50.0 55.0 58.1 57.8 8.4 0.0 0.275442 60769 61407 649-731 1.000000 84.0 ycf4-cemA_p3 ycf4-cemA 3 GGAACCATTCCCTTGACTCG ATGAGAGAGAGACCCACCAG 20 20 55.0 55.0 58.3 57.8 0.0 0.0 0.418573 60769 61407 729-811 1.000000 82.6 ycf4-cemA_p4 ycf4-cemA 4 TTTCTTGCGCGTACCAATTG ATGAGAGAGAGACCCACCAG 20 20 45.0 55.0 57.7 57.8 8.4 0.0 0.481579 60769 61407 652-734 1.000000 82.3 ycf4-cemA_p5 ycf4-cemA 5 CCTATTTCTTGCGCGTACCA ATGAGAGAGAGACCCACCAG 20 20 50.0 55.0 58.4 57.8 8.4 0.0 0.510294 60769 61407 656-738 1.000000 82.1 trnW-CCA-trnP-UGG_p1 trnW-CCA-trnP-UGG 1 GCGTTCTACCGAACTGAACT GTCACGGGTTCAAATCCTGT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.169530 66561 66708 204-209 1.000000 82.5 trnW-CCA-trnP-UGG_p2 trnW-CCA-trnP-UGG 2 GCGTTCTACCGAACTGAACT CACGGGTTCAAATCCTGTCA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.170864 66561 66708 202-207 1.000000 82.5 trnW-CCA-trnP-UGG_p3 trnW-CCA-trnP-UGG 3 GCGTTCTACCGAACTGAACT TGTCACGGGTTCAAATCCTG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.170864 66561 66708 205-210 1.000000 82.5 trnW-CCA-trnP-UGG_p4 trnW-CCA-trnP-UGG 4 GCGTTCTACCGAACTGAACT GGGTACAAAATGTCACGGGT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.161494 66561 66708 215-220 1.000000 82.4 trnW-CCA-trnP-UGG_p5 trnW-CCA-trnP-UGG 5 GCGTTCTACCGAACTGAACT TGGGTACAAAATGTCACGGG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.162838 66561 66708 216-221 1.000000 82.4 trnH-GUG-rpl2_p1 trnH-GUG-rpl2 1 TGGATCAAGGCAGTGGATTG GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 57.9 58.0 0.0 22.4 0.157457 84153 84195 179-179 1.000000 80.1 trnH-GUG-rpl2_p2 trnH-GUG-rpl2 2 GGATCAAGGCAGTGGATTGT GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 57.9 58.0 0.0 22.4 0.158965 84153 84195 178-178 1.000000 80.1 trnH-GUG-rpl2_p3 trnH-GUG-rpl2 3 GTGGATCAAGGCAGTGGATT GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 57.9 58.0 0.0 22.4 0.158965 84153 84195 180-180 1.000000 80.1 trnH-GUG-rpl2_p4 trnH-GUG-rpl2 4 CGGATGTAGCCAAGTGGATC GTTATCCTGCGCTTGGAAGA 20 20 55.0 50.0 58.1 58.0 0.2 22.4 0.153095 84153 84195 193-193 1.000000 80.0 trnH-GUG-rpl2_p5 trnH-GUG-rpl2 5 CGGATGTAGCCAAGTGGATC TATCCTGCGCTTGGAAGAAG 20 20 55.0 50.0 58.1 57.7 0.2 22.4 0.444845 84153 84195 191-191 1.000000 77.7 rrn4.5-rrn5_p1 rrn4.5-rrn5 1 CAGCTGAGGCATCCTAACAG AGTATCGTCACCGCAGTAGA 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 107593 107813 335-338 1.000000 82.7 rrn4.5-rrn5_p2 rrn4.5-rrn5 2 CAGCTGAGGCATCCTAACAG TATCGTCACCGCAGTAGAGT 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 107593 107813 333-336 1.000000 82.7 rrn4.5-rrn5_p3 rrn4.5-rrn5 3 GCTGAGGCATCCTAACAGAC TATCGTCACCGCAGTAGAGT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.087359 107593 107813 331-334 1.000000 82.7 rrn4.5-rrn5_p4 rrn4.5-rrn5 4 GCTGAGGCATCCTAACAGAC AGTATCGTCACCGCAGTAGA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.087359 107593 107813 333-336 1.000000 82.6 rrn4.5-rrn5_p5 rrn4.5-rrn5 5 CAGCTGAGGCATCCTAACAG TCCCCTACAGTATCGTCACC 20 20 55.0 55.0 58.0 57.9 8.4 0.0 0.112142 107593 107813 343-346 1.000000 82.4 ndhF-rpl32_p1 ndhF-rpl32 1 CTGCAATTGGTCGTGTGAAC AGGACTAGACCGAGTGTACAG 20 21 50.0 52.4 58.0 58.0 7.7 5.6 1.047987 112371 113301 1772-1788 1.000000 76.2 ndhF-rpl32_p2 ndhF-rpl32 2 CTGCAATTGGTCGTGTGAAC GGACTAGACCGAGTGTACAGA 20 21 50.0 52.4 58.0 58.0 7.7 0.0 1.053328 112371 113301 1771-1787 1.000000 76.2 ndhF-rpl32_p3 ndhF-rpl32 3 GCGCAGATTTAGCAATTGCA AGGACTAGACCGAGTGTACAG 20 21 45.0 52.4 58.1 58.0 30.9 5.6 1.099429 112371 113301 1985-2001 1.000000 75.4 ndhF-rpl32_p4 ndhF-rpl32 4 TGCGCAGATTTAGCAATTGC AGGACTAGACCGAGTGTACAG 20 21 45.0 52.4 58.1 58.0 23.1 5.6 1.099429 112371 113301 1986-2002 1.000000 75.4 ndhF-rpl32_p5 ndhF-rpl32 5 GCGCAGATTTAGCAATTGCA GGACTAGACCGAGTGTACAGA 20 21 45.0 52.4 58.1 58.0 30.9 0.0 1.104770 112371 113301 1984-2000 1.000000 75.3 ccsA-ndhD_p1 ccsA-ndhD 1 AGTTATGGTTCATTCACATGA TGACAAGGTACAAGCTATCCT 21 21 33.3 42.9 52.8 56.1 0.0 0.0 9.103553 115204 115447 307-308 1.000000 49.4 ccsA-ndhD_p2 ccsA-ndhD 2 AGTTATGGTTCATTCACATGA TGACAAGGTACAAGCTATCC 21 20 33.3 45.0 52.8 54.5 0.0 0.0 9.703261 115204 115447 307-308 1.000000 49.4 ccsA-ndhD_p3 ccsA-ndhD 3 AGTTATGGTTCATTCACATGA GACAAGGTACAAGCTATCCT 21 20 33.3 45.0 52.8 54.2 0.0 0.0 10.014134 115204 115447 306-307 1.000000 49.4 ccsA-ndhD_p4 ccsA-ndhD 4 AGTTATGGTTCATTCACATGA TTGACAAGGTACAAGCTATCCT 21 22 33.3 40.9 52.8 56.8 0.0 0.0 9.358674 115204 115447 308-309 1.000000 49.3 ccsA-ndhD_p5 ccsA-ndhD 5 AGTTATGGTTCATTCACATGA TTGACAAGGTACAAGCTATCC 21 21 33.3 42.9 52.8 55.3 0.0 0.0 9.860219 115204 115447 308-309 1.000000 49.3 ndhD_p1 ndhD 1 TGCTTTCTATCTCATTAATGAAAA ACCGAGAAAAACCCGTACTC 24 20 25.0 50.0 52.8 57.6 18.5 0.0 9.680748 115448 116950 1605-1605 1.000000 41.7 ndhD_p2 ndhD 2 TTGCTTTCTATCTCATTAATGAAA ACCGAGAAAAACCCGTACTC 24 20 25.0 50.0 52.8 57.6 18.5 0.0 9.680748 115448 116950 1606-1606 1.000000 41.7 ndhD_p3 ndhD 3 TTTGCTTTCTATCTCATTAATGAA ACCGAGAAAAACCCGTACTC 24 20 25.0 50.0 52.8 57.6 18.5 0.0 9.680748 115448 116950 1607-1607 1.000000 41.7 ndhD_p4 ndhD 4 TGCTTTCTATCTCATTAATGAAAA CCGAGAAAAACCCGTACTCG 24 20 25.0 55.0 52.8 58.7 18.5 0.0 9.891677 115448 116950 1604-1604 1.000000 41.7 ndhD_p5 ndhD 5 TTGCTTTCTATCTCATTAATGAAA CCGAGAAAAACCCGTACTCG 24 20 25.0 55.0 52.8 58.7 18.5 0.0 9.891677 115448 116950 1605-1605 1.000000 41.7 ycf1_p1 ycf1 1 CTCTACGACGTCTGGGAGAT ACCTTGACCAATACGTATGCC 20 21 55.0 47.6 58.0 58.1 14.7 9.2 1.129644 124570 124689 814-814 0.500000 51.0 ycf1_p2 ycf1 2 CTCTACGACGTCTGGGAGAT CCTTGACCAATACGTATGCCA 20 21 55.0 47.6 58.0 58.1 14.7 9.2 1.130932 124570 124689 813-813 0.500000 51.0 ycf1_p3 ycf1 3 TTCTCTACGACGTCTGGGAG ACCTTGACCAATACGTATGCC 20 21 55.0 47.6 58.3 58.1 14.7 9.2 1.350555 124570 124689 816-816 0.500000 49.2 ycf1_p4 ycf1 4 TTCTCTACGACGTCTGGGAG CCTTGACCAATACGTATGCCA 20 21 55.0 47.6 58.3 58.1 14.7 9.2 1.351843 124570 124689 815-815 0.500000 49.2 ycf1_p5 ycf1 5 ACGACGTCTGGGAGATAGAA ACCTTGACCAATACGTATGCC 20 21 50.0 47.6 57.6 58.1 14.7 9.2 1.500934 124570 124689 810-810 0.500000 48.0 rrn5-rrn4.5_p1 rrn5-rrn4.5 1 AGTATCGTCACCGCAGTAGA CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 130440 130660 335-338 1.000000 82.7 rrn5-rrn4.5_p2 rrn5-rrn4.5 2 TATCGTCACCGCAGTAGAGT CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 130440 130660 333-336 1.000000 82.7 rrn5-rrn4.5_p3 rrn5-rrn4.5 3 TATCGTCACCGCAGTAGAGT GCTGAGGCATCCTAACAGAC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.087359 130440 130660 331-334 1.000000 82.7 rrn5-rrn4.5_p4 rrn5-rrn4.5 4 AGTATCGTCACCGCAGTAGA GCTGAGGCATCCTAACAGAC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.087359 130440 130660 333-336 1.000000 82.6 rrn5-rrn4.5_p5 rrn5-rrn4.5 5 TCCCCTACAGTATCGTCACC CAGCTGAGGCATCCTAACAG 20 20 55.0 55.0 57.9 58.0 0.0 8.4 0.112142 130440 130660 343-346 1.000000 82.4 rpl2-trnH-GUG_p1 rpl2-trnH-GUG 1 GTTATCCTGCGCTTGGAAGA TGGATCAAGGCAGTGGATTG 20 20 50.0 50.0 58.0 57.9 22.4 0.0 0.157457 154058 154100 179-179 1.000000 80.1 rpl2-trnH-GUG_p2 rpl2-trnH-GUG 2 GTTATCCTGCGCTTGGAAGA GGATCAAGGCAGTGGATTGT 20 20 50.0 50.0 58.0 57.9 22.4 0.0 0.158965 154058 154100 178-178 1.000000 80.1 rpl2-trnH-GUG_p3 rpl2-trnH-GUG 3 GTTATCCTGCGCTTGGAAGA GTGGATCAAGGCAGTGGATT 20 20 50.0 50.0 58.0 57.9 22.4 0.0 0.158965 154058 154100 180-180 1.000000 80.1 rpl2-trnH-GUG_p4 rpl2-trnH-GUG 4 GTTATCCTGCGCTTGGAAGA CGGATGTAGCCAAGTGGATC 20 20 50.0 55.0 58.0 58.1 22.4 0.2 0.153095 154058 154100 193-193 1.000000 80.0 rpl2-trnH-GUG_p5 rpl2-trnH-GUG 5 TATCCTGCGCTTGGAAGAAG CGGATGTAGCCAAGTGGATC 20 20 50.0 55.0 57.7 58.1 22.4 0.2 0.444845 154058 154100 191-191 1.000000 77.7