feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 154 182 -1 29 LSC 0.000000 0 0 38 118 no 0.000000 1 0.000000 NA 1.000000 21.600000 matK gene matK matK 416 1957 -1 1542 LSC 0.024278 37 18 55 21 no 1.000000 2 1.000000 NA 0.988327 60.300000 IGS_003 igs matK|trnK-UUU matK-trnK-UUU 1958 3040 0 1083 LSC 0.023084 25 0 13 21 no 1.000000 2 1.000000 NA 1.000000 58.000000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 3041 3077 -1 37 LSC 0.027027 1 0 39 0 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_004 igs trnK-UUU|rps16 trnK-UUU-rps16 3078 3618 0 541 LSC 0.025292 13 27 15 25 no 1.000000 2 1.000000 NA 0.950092 62.900000 rps16 gene rps16 rps16 3619 4584 -1 966 LSC 0.038342 37 1 11 1 no 1.000000 2 1.000000 NA 0.998965 66.000000 IGS_005 igs rps16|trnQ-UUG rps16-trnQ-UUG 4585 4815 0 231 LSC 0.069565 16 1 1 27 yes 1.000000 2 1.000000 NA 0.995671 69.200000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 4816 4887 -1 72 LSC 0.013889 1 0 2 5 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_006 igs trnQ-UUG|psbK trnQ-UUG-psbK 4888 5229 0 342 LSC 0.036585 12 14 44 29 no 1.000000 2 1.000000 NA 0.959064 65.400000 psbK gene psbK psbK 5230 5397 1 168 LSC 0.048485 8 3 25 30 no 1.000000 2 1.000000 NA 0.982143 68.900000 IGS_007 igs psbK|psbI psbK-psbI 5398 5887 0 490 LSC 0.032258 15 25 2 56 no 1.000000 2 1.000000 NA 0.948980 64.800000 psbI gene psbI psbI 5888 6010 1 123 LSC 0.008403 1 4 12 90 no 1.000000 2 1.000000 NA 0.967480 46.300000 IGS_008 igs psbI|trnS-GCU psbI-trnS-GCU 6011 6164 0 154 LSC 0.013793 2 9 66 27 no 1.000000 2 1.000000 NA 0.941558 52.000000 trnS-GCU tRNA trnS-GCU trnS-GCU 6165 6252 -1 88 LSC 0.022727 2 0 25 37 no 1.000000 2 1.000000 NA 1.000000 52.400000 IGS_009 igs trnS-GCU|trnG-GCC trnS-GCU-trnG-GCC 6253 6682 0 430 LSC 0.018605 8 0 25 116 no 1.000000 2 1.000000 NA 1.000000 52.800000 trnG-GCC_part1 tRNA trnG-GCC trnG-GCC 6683 6705 1 23 LSC 0.000000 0 0 87 93 no 0.000000 1 0.000000 NA 1.000000 25.300000 trnG-GCC_part2 tRNA trnG-GCC trnG-GCC 7385 7421 1 37 LSC 0.000000 0 0 33 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_012 igs trnG-GCC|trnR-UCU trnG-GCC-trnR-UCU 7422 7550 0 129 LSC 0.023622 3 2 70 1 no 1.000000 2 1.000000 NA 0.984496 52.600000 trnR-UCU tRNA trnR-UCU trnR-UCU 7551 7622 1 72 LSC 0.027778 2 0 44 16 no 1.000000 2 1.000000 NA 1.000000 54.700000 IGS_013 igs trnR-UCU|atpA trnR-UCU-atpA 7623 7777 0 155 LSC 0.052083 5 59 67 2 no 1.000000 2 1.000000 NA 0.619355 59.700000 atpA gene atpA atpA 7778 9228 -1 1451 LSC 0.045918 9 1255 25 300 no 1.000000 2 1.000000 NA 0.135079 56.300000 IGS_014 igs atpA|atpF atpA-atpF 9229 9299 0 71 LSC NA 0 71 300 245 no 1.000000 2 1.000000 NA 0.000000 40.000000 atpF gene atpF atpF 9300 10034 -1 735 LSC 0.024896 12 253 300 48 no 1.000000 2 1.000000 NA 0.655782 57.200000 IGS_015 igs atpF|atpH atpF-atpH 10035 10346 0 312 LSC 0.029605 9 8 7 18 no 1.000000 2 1.000000 NA 0.974359 57.700000 atpH gene atpH atpH 10347 10676 -1 330 LSC 0.030651 8 69 12 5 no 1.000000 2 1.000000 NA 0.790909 55.700000 IGS_016 igs atpH|atpI atpH-atpI 10677 11220 0 544 LSC 0.031423 17 3 53 103 no 1.000000 2 1.000000 NA 0.994485 65.100000 atpI gene atpI atpI 11221 11919 -1 699 LSC 0.018895 13 11 8 57 no 1.000000 2 1.000000 NA 0.984263 56.700000 IGS_017 igs atpI|rps2 atpI-rps2 11920 12210 0 291 LSC 0.025180 7 13 2 54 no 1.000000 2 1.000000 NA 0.955326 56.300000 rps2 gene rps2 rps2 12211 12921 -1 711 LSC 0.018284 13 0 4 36 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_018 igs rps2|rpoC2 rps2-rpoC2 12922 13363 0 442 LSC 0.019231 8 26 10 5 no 1.000000 2 1.000000 NA 0.941176 56.300000 rpoC2 gene rpoC2 rpoC2 13364 14938 -1 1575 LSC 0.046795 73 15 37 0 yes 1.000000 2 1.000000 NA 0.990476 71.400000 IGS_019 igs rpoC2|trnC-GCA rpoC2-trnC-GCA 14939 16938 0 2000 LSC 0.405760 803 21 7 5 yes 1.000000 2 1.000000 NA 0.989500 79.100000 trnC-GCA tRNA trnC-GCA trnC-GCA 16939 17009 1 71 LSC 0.042254 3 0 57 32 no 1.000000 2 1.000000 NA 1.000000 64.200000 IGS_020 igs trnC-GCA|petN trnC-GCA-petN 17010 17840 0 831 LSC 0.019441 16 8 48 31 no 1.000000 2 1.000000 NA 0.990373 58.200000 petN gene petN petN 17841 17936 1 96 LSC 0.020833 2 0 77 6 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_021 igs petN|trnD-GUC petN-trnD-GUC 17937 18116 0 180 LSC 0.044444 8 0 37 128 no 1.000000 2 1.000000 NA 1.000000 65.800000 trnD-GUC tRNA trnD-GUC trnD-GUC 18117 18190 -1 74 LSC 0.000000 0 0 5 54 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_022 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 18191 18485 0 295 LSC 0.046099 13 13 79 36 yes 1.000000 2 1.000000 NA 0.955932 70.700000 trnY-GUA tRNA trnY-GUA trnY-GUA 18486 18569 -1 84 LSC 0.011905 1 0 1 9 no 1.000000 2 1.000000 NA 1.000000 44.400000 IGS_023 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 18570 18628 0 59 LSC 0.084746 5 0 47 16 yes 1.000000 2 1.000000 NA 1.000000 71.800000 trnE-UUC tRNA trnE-UUC trnE-UUC 18629 18701 -1 73 LSC 0.027397 2 0 0 78 no 1.000000 2 1.000000 NA 1.000000 53.300000 IGS_024 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 18702 18830 0 129 LSC 0.007937 1 3 4 49 no 1.000000 2 1.000000 NA 0.976744 44.600000 trnT-GGU tRNA trnT-GGU trnT-GGU 18831 18902 1 72 LSC 0.027778 2 0 50 62 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_025 igs trnT-GGU|psbD trnT-GGU-psbD 18903 19576 0 674 LSC 0.032738 22 2 13 39 no 1.000000 2 1.000000 NA 0.997033 63.800000 psbD gene psbD psbD 19577 20555 1 979 LSC 0.022564 22 4 34 16 no 1.000000 2 1.000000 NA 0.995914 58.300000 psbC gene psbC psbC 20503 21199 1 697 LSC 0.027260 19 0 48 80 no 1.000000 2 1.000000 NA 1.000000 63.000000 IGS_027 igs psbC|trnS-UGA psbC-trnS-UGA 21200 21329 0 130 LSC 0.023077 3 0 26 150 no 1.000000 2 1.000000 NA 1.000000 52.700000 trnS-UGA tRNA trnS-UGA trnS-UGA 21330 21422 -1 93 LSC 0.000000 0 0 8 57 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_028 igs trnS-UGA|psbZ trnS-UGA-psbZ 21423 21651 0 229 LSC 0.017467 4 0 101 24 no 1.000000 2 1.000000 NA 1.000000 49.300000 psbZ gene psbZ psbZ 21652 21795 1 144 LSC 0.041667 6 0 4 1 no 1.000000 2 1.000000 NA 1.000000 61.500000 IGS_029 igs psbZ|trnG-UCC psbZ-trnG-UCC 21796 22113 0 318 LSC 0.022654 7 9 10 115 no 1.000000 2 1.000000 NA 0.971698 54.300000 trnG-UCC tRNA trnG-UCC trnG-UCC 22114 22184 1 71 LSC 0.000000 0 0 21 44 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_030 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 22185 22391 0 207 LSC 0.014563 3 1 92 61 no 1.000000 2 1.000000 NA 0.995169 50.900000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 22392 22465 -1 74 LSC 0.013514 1 0 19 31 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_031 igs trnfM-CAU|rps14 trnfM-CAU-rps14 22466 22630 0 165 LSC 0.018182 3 0 12 300 no 1.000000 2 1.000000 NA 1.000000 48.900000 rps14 gene rps14 rps14 22631 22933 -1 303 LSC 0.000000 0 0 1 67 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_032 igs rps14|psaB rps14-psaB 22934 23073 0 140 LSC 0.014925 2 6 300 22 no 1.000000 2 1.000000 NA 0.957143 51.800000 psaB gene psaB psaB 23074 24854 -1 1781 LSC 0.022689 40 18 29 39 no 1.000000 2 1.000000 NA 0.989893 59.300000 IGS_033 igs psaB|psaA psaB-psaA 24855 24879 0 25 LSC 0.000000 0 0 173 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 psaA gene psaA psaA 24880 25580 -1 701 LSC 0.024355 17 3 198 19 no 1.000000 2 1.000000 NA 0.995720 59.600000 IGS_034 igs psaA|ycf3 psaA-ycf3 25581 26307 0 727 LSC 0.026352 19 6 8 10 no 1.000000 2 1.000000 NA 0.991747 60.300000 ycf3 gene ycf3 ycf3 26308 27330 -1 1023 LSC 0.027478 28 4 1 0 no 1.000000 2 1.000000 NA 0.996090 59.900000 IGS_035 igs ycf3|trnS-GGA ycf3-trnS-GGA 27331 27715 0 385 LSC 0.032353 11 45 0 57 no 1.000000 2 1.000000 NA 0.883117 60.400000 trnS-GGA tRNA trnS-GGA trnS-GGA 27716 27804 1 89 LSC 0.022989 2 2 39 43 no 1.000000 2 1.000000 NA 0.977528 55.800000 IGS_036 igs trnS-GGA|rps4 trnS-GGA-rps4 27805 28066 0 262 LSC 0.027451 7 7 0 12 no 1.000000 2 1.000000 NA 0.973282 55.800000 rps4 gene rps4 rps4 28067 28672 -1 606 LSC 0.016502 10 0 26 196 no 1.000000 2 1.000000 NA 1.000000 55.200000 IGS_037 igs rps4|trnT-UGU rps4-trnT-UGU 28673 28989 0 317 LSC 0.012739 4 3 243 206 no 1.000000 2 1.000000 NA 0.990536 61.100000 trnT-UGU tRNA trnT-UGU trnT-UGU 28990 29062 -1 73 LSC 0.000000 0 2 27 133 no 1.000000 2 1.000000 NA 0.972603 42.200000 IGS_038 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 29063 29815 0 753 LSC 0.030956 23 10 100 105 yes 1.000000 2 1.000000 NA 0.986720 70.300000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 29816 29850 1 35 LSC 0.000000 0 0 21 70 no 0.000000 1 0.000000 NA 1.000000 20.300000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 30444 30493 1 50 LSC 0.000000 0 6 69 17 no 1.000000 2 1.000000 NA 0.880000 41.600000 IGS_041 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 30494 30866 0 373 LSC 0.024129 9 0 119 122 no 1.000000 2 1.000000 NA 1.000000 61.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 30867 30939 1 73 LSC 0.000000 0 0 65 49 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_042 igs trnF-GAA|trnV-UAC trnF-GAA-trnV-UAC 30940 31308 0 369 LSC 0.039326 14 13 138 28 no 1.000000 2 1.000000 NA 0.964770 66.900000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 31309 31345 -1 37 LSC 0.054054 2 0 27 282 no 1.000000 2 1.000000 NA 1.000000 68.800000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 31929 31967 -1 39 LSC 0.025641 1 0 126 33 no 1.000000 2 1.000000 NA 1.000000 54.700000 IGS_045 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 31968 32141 0 174 LSC 0.011494 2 0 25 42 no 1.000000 2 1.000000 NA 1.000000 46.000000 trnM-CAU tRNA trnM-CAU trnM-CAU 32142 32214 1 73 LSC 0.013699 1 0 35 82 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_046 igs trnM-CAU|atpE trnM-CAU-atpE 32215 32398 0 184 LSC 0.016304 3 0 30 61 no 1.000000 2 1.000000 NA 1.000000 49.100000 atpE gene atpE atpE 32399 32803 -1 405 LSC 0.017284 7 0 33 53 no 1.000000 2 1.000000 NA 1.000000 52.100000 atpB gene atpB atpB 32800 34280 -1 1481 LSC 0.042553 18 1058 8 300 no 1.000000 2 1.000000 NA 0.285618 56.100000 IGS_048 igs atpB|rbcL atpB-rbcL 34281 34878 0 598 LSC NA 0 598 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 rbcL gene rbcL rbcL 34879 36216 1 1338 LSC 0.043573 20 879 300 127 no 1.000000 2 1.000000 NA 0.343049 66.500000 IGS_049 igs rbcL|accD rbcL-accD 36217 37041 0 825 LSC 0.018821 15 28 9 88 no 1.000000 2 1.000000 NA 0.966061 58.500000 accD gene accD accD 37042 38475 1 1434 LSC 0.011244 16 11 135 17 no 1.000000 2 1.000000 NA 0.992329 52.200000 IGS_050 igs accD|psaI accD-psaI 38476 39205 0 730 LSC 0.107091 74 39 17 1 yes 1.000000 2 1.000000 NA 0.946575 83.600000 psaI gene psaI psaI 39206 39310 1 105 LSC 0.064516 6 12 5 4 yes 1.000000 2 1.000000 NA 0.885714 70.500000 IGS_051 igs psaI|ycf4 psaI-ycf4 39311 39620 0 310 LSC 0.118421 36 6 2 10 yes 1.000000 2 1.000000 NA 0.980645 74.700000 ycf4 gene ycf4 ycf4 39621 39964 1 344 LSC 0.017442 6 0 20 54 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_052 igs ycf4|cemA ycf4-cemA 39965 40695 0 731 LSC 0.025352 18 21 11 29 no 1.000000 2 1.000000 NA 0.971272 61.800000 cemA gene cemA cemA 40696 40950 1 255 LSC 0.045082 11 11 3 18 no 1.000000 2 1.000000 NA 0.956863 67.600000 IGS_053 igs cemA|petG cemA-petG 40951 41120 0 170 LSC 0.035294 6 0 29 49 no 1.000000 2 1.000000 NA 1.000000 60.000000 petG gene petG petG 41121 41225 1 105 LSC 0.009524 1 0 27 26 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_054 igs petG|trnW-CCA petG-trnW-CCA 41226 41341 0 116 LSC 0.043478 5 1 55 25 no 1.000000 2 1.000000 NA 0.991379 65.200000 trnW-CCA tRNA trnW-CCA trnW-CCA 41342 41415 -1 74 LSC 0.013514 1 0 83 19 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_055 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 41416 41575 0 160 LSC 0.059211 9 8 48 144 yes 1.000000 2 1.000000 NA 0.950000 75.500000 trnP-UGG tRNA trnP-UGG trnP-UGG 41576 41649 -1 74 LSC 0.000000 0 0 0 70 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_056 igs trnP-UGG|psaJ trnP-UGG-psaJ 41650 41896 0 247 LSC 0.020325 5 1 74 0 no 1.000000 2 1.000000 NA 0.995951 49.600000 psaJ gene psaJ psaJ 41897 42040 1 144 LSC 0.020833 3 0 5 45 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_057 igs psaJ|rpl33 psaJ-rpl33 42041 42484 0 444 LSC 0.020501 9 5 25 46 no 1.000000 2 1.000000 NA 0.988739 55.200000 rpl33 gene rpl33 rpl33 42485 42685 1 201 LSC 0.019900 4 0 70 20 no 1.000000 2 1.000000 NA 1.000000 50.400000 IGS_058 igs rpl33|rps18 rpl33-rps18 42686 42834 0 149 LSC 0.046980 7 0 55 19 no 1.000000 2 1.000000 NA 1.000000 65.900000 rps18 gene rps18 rps18 42835 43140 1 306 LSC 0.032680 10 0 25 102 no 1.000000 2 1.000000 NA 1.000000 58.300000 IGS_059 igs rps18|rpl20 rps18-rpl20 43141 43417 0 277 LSC 0.042636 11 19 39 10 no 1.000000 2 1.000000 NA 0.931408 66.700000 rpl20 gene rpl20 rpl20 43418 43771 -1 354 LSC 0.039548 14 0 40 80 no 1.000000 2 1.000000 NA 1.000000 64.400000 IGS_060 igs rpl20|rps12 rpl20-rps12 43772 44574 0 803 LSC 0.017544 14 5 37 139 no 1.000000 2 1.000000 NA 0.993773 57.200000 rps12_part1 gene rps12 rps12 44575 44688 -1 114 LSC 0.000000 0 0 42 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 rps12_part1 gene rps12 rps12 44575 44688 1 114 LSC 0.000000 0 0 42 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_062 igs rps12|clpP rps12-clpP 44689 44829 0 141 LSC 0.049645 7 0 156 15 no 1.000000 2 1.000000 NA 1.000000 67.200000 clpP gene clpP clpP 44830 46937 -1 2108 LSC 0.014327 30 14 16 74 no 1.000000 2 1.000000 NA 0.993359 52.600000 IGS_063 igs clpP|psbB clpP-psbB 46938 47368 0 431 LSC 0.021127 9 5 66 5 no 1.000000 2 1.000000 NA 0.988399 53.800000 psbB gene psbB psbB 47369 48449 1 1081 LSC 0.186603 195 36 1 0 yes 1.000000 2 1.000000 NA 0.966698 82.000000 IGS_064 igs psbB|petD psbB-petD 48450 48653 0 204 LSC 0.039216 8 0 1 35 no 1.000000 2 1.000000 NA 1.000000 60.100000 petD gene petD petD 48654 48953 1 300 LSC 0.026667 8 0 8 77 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_065 igs petD|rpoA petD-rpoA 48954 49587 0 634 LSC 0.022581 14 14 41 40 no 1.000000 2 1.000000 NA 0.977918 61.800000 rpoA gene rpoA rpoA 49588 50307 -1 720 LSC 0.025000 18 0 98 6 no 1.000000 2 1.000000 NA 1.000000 58.600000 IGS_066 igs rpoA|rps11 rpoA-rps11 50308 50384 0 77 LSC 0.025974 2 0 9 63 no 1.000000 2 1.000000 NA 1.000000 53.100000 rps11 gene rps11 rps11 50385 50777 -1 393 LSC 0.007634 3 0 43 23 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_067 igs rps11|rpl36 rps11-rpl36 50778 50938 0 161 LSC 0.025000 3 41 300 101 no 1.000000 2 1.000000 NA 0.745342 57.700000 rpl36 gene rpl36 rpl36 50939 51052 -1 114 LSC 0.017544 2 0 97 64 no 1.000000 2 1.000000 NA 1.000000 52.400000 IGS_068 igs rpl36|infA rpl36-infA 51053 51149 0 97 LSC 0.031579 3 2 7 5 no 1.000000 2 1.000000 NA 0.979381 57.900000 infA gene infA infA 51150 51392 -1 243 LSC 0.021368 5 9 6 27 no 1.000000 2 1.000000 NA 0.962963 53.700000 IGS_069 igs infA|rps8 infA-rps8 51393 51506 0 114 LSC 0.043860 5 0 18 150 no 1.000000 2 1.000000 NA 1.000000 64.100000 rps8 gene rps8 rps8 51507 51902 -1 396 LSC 0.015152 6 0 9 2 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_070 igs rps8|rpl14 rps8-rpl14 51903 52117 0 215 LSC 0.041860 9 0 3 6 no 1.000000 2 1.000000 NA 1.000000 61.800000 rpl14 gene rpl14 rpl14 52118 52486 -1 369 LSC 0.018970 7 0 1 4 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_071 igs rpl14|rpl16 rpl14-rpl16 52487 52604 0 118 LSC 0.022222 2 28 18 234 no 1.000000 2 1.000000 NA 0.762712 50.500000 rpl16 gene rpl16 rpl16 52605 52964 -1 360 LSC 0.002778 1 0 60 142 no 1.000000 2 1.000000 NA 1.000000 44.800000 IGS_072 igs rpl16|rps3 rpl16-rps3 52965 54415 0 1451 LSC 0.020167 29 13 125 141 no 1.000000 2 1.000000 NA 0.991041 65.600000 rps3 gene rps3 rps3 54416 55063 -1 648 LSC 0.012520 8 9 15 87 no 1.000000 2 1.000000 NA 0.986111 53.400000 rpl22 gene rpl22 rpl22 55032 55457 -1 426 LSC 0.009412 4 1 22 15 no 1.000000 2 1.000000 NA 0.997653 46.900000 IGS_074 igs rpl22|rps19 rpl22-rps19 55458 55673 0 216 LSC 0.037037 8 0 21 0 no 1.000000 2 1.000000 NA 1.000000 58.800000 rps19 gene rps19 rps19 55674 55952 -1 279 LSC 0.021505 6 0 1 4 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_075 igs rps19|trnH-GUG rps19-trnH-GUG 55953 56105 0 153 LSC 0.041379 6 8 63 44 no 1.000000 2 1.000000 NA 0.947712 69.100000 trnH-GUG tRNA trnH-GUG trnH-GUG 56106 56179 1 74 LSC 0.013514 1 0 46 151 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_076 igs trnH-GUG|rpl2 trnH-GUG-rpl2 56180 56222 0 43 LSC 0.000000 0 0 29 108 no 0.000000 1 0.000000 NA 1.000000 20.900000 rpl2 gene rpl2 rpl2 56223 57673 -1 1451 LSC 0.013176 19 9 72 36 no 1.000000 2 1.000000 NA 0.993797 54.600000 IGS_077 igs rpl2|rpl23 rpl2-rpl23 57674 57705 0 32 IRb 0.000000 0 8 22 4 no 1.000000 2 1.000000 NA 0.750000 37.000000 rpl23 gene rpl23 rpl23 57706 57987 -1 282 IRb 0.007092 2 0 54 5 no 1.000000 2 1.000000 NA 1.000000 42.000000 IGS_078 igs rpl23|trnI-CAU rpl23-trnI-CAU 57988 58152 0 165 IRb 0.018182 3 0 233 211 no 1.000000 2 1.000000 NA 1.000000 63.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 58153 58226 -1 74 IRb 0.000000 0 0 9 137 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_079 igs trnI-CAU|ycf2 trnI-CAU-ycf2 58227 58294 0 68 IRb 0.000000 0 0 83 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 ycf2 gene ycf2 ycf2 58295 64951 1 6657 IRb 0.009335 62 15 151 7 no 1.000000 2 1.000000 NA 0.997747 43.600000 IGS_080 igs ycf2|trnL-CAA ycf2-trnL-CAA 64952 65904 0 953 IRb 0.014815 14 8 300 300 no 1.000000 2 1.000000 NA 0.991605 68.100000 trnL-CAA tRNA trnL-CAA trnL-CAA 65905 65985 -1 81 IRb 0.000000 0 0 98 300 no 0.000000 1 0.000000 NA 1.000000 26.100000 IGS_081 igs trnL-CAA|ndhB trnL-CAA-ndhB 65986 66559 0 574 IRb 0.005226 3 0 179 6 no 1.000000 2 1.000000 NA 1.000000 46.700000 ndhB gene ndhB ndhB 66560 68859 -1 2300 IRb 0.010276 19 451 10 300 no 1.000000 2 1.000000 NA 0.803913 49.200000 IGS_082 igs ndhB|rps7 ndhB-rps7 68860 69069 0 210 IRb 0.000000 0 0 77 300 no 0.000000 1 0.000000 NA 1.000000 24.500000 rps7 gene rps7 rps7 69070 69537 -1 468 IRb 0.000000 0 0 287 50 no 0.000000 1 0.000000 NA 1.000000 26.000000 IGS_083 igs rps7|rps12 rps7-rps12 69538 69595 0 58 IRb 0.017241 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 62.400000 rps12_part2 gene rps12 rps12 69596 70404 -1 809 IRb 0.004950 4 1 7 204 no 1.000000 2 1.000000 NA 0.998764 47.200000 IGS_084 igs rps12|trnV-GAC rps12-trnV-GAC 70405 71503 0 1099 IRb 0.007279 8 0 209 90 no 1.000000 2 1.000000 NA 1.000000 54.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 71504 71575 1 72 IRb 0.000000 0 0 173 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_085 igs trnV-GAC|rrn16 trnV-GAC-rrn16 71576 71804 0 229 IRb 0.017467 4 0 245 300 no 1.000000 2 1.000000 NA 1.000000 62.500000 rrn16 rRNA rrn16 rrn16 71805 73294 1 1490 IRb 0.001342 2 0 51 7 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_086 igs rrn16|trnI-GAU rrn16-trnI-GAU 73295 73586 0 292 IRb 0.010309 3 1 159 63 no 1.000000 2 1.000000 NA 0.996575 48.500000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 73587 73628 1 42 IRb 0.000000 0 0 55 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 74582 74616 1 35 IRb 0.000000 0 0 242 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_089 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 74617 74680 0 64 IRb 0.000000 0 0 277 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 74681 74718 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 75534 75568 1 35 IRb 0.000000 0 0 271 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_092 igs trnA-UGC|rrn23 trnA-UGC-rrn23 75569 75722 0 154 IRb 0.000000 0 0 300 204 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 75723 78529 1 2807 IRb 0.002138 6 1 300 300 no 1.000000 2 1.000000 NA 0.999644 57.300000 IGS_093 igs rrn23|rrn4.5 rrn23-rrn4.5 78530 78628 0 99 IRb 0.000000 0 0 300 262 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 78629 78731 1 103 IRb 0.000000 0 0 300 159 no 0.000000 1 0.000000 NA 1.000000 30.700000 IGS_094 igs rrn4.5|rrn5 rrn4.5-rrn5 78732 78939 0 208 IRb 0.004808 1 0 300 129 no 1.000000 2 1.000000 NA 1.000000 49.900000 rrn5 rRNA rrn5 rrn5 78940 79060 1 121 IRb 0.000000 0 0 48 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_095 igs rrn5|trnR-ACG rrn5-trnR-ACG 79061 79310 0 250 IRb 0.008000 2 0 169 83 no 1.000000 2 1.000000 NA 1.000000 48.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 79311 79389 1 79 IRb 0.000000 0 0 159 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_096 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 79390 79899 0 510 IRb 0.032854 16 23 238 32 no 1.000000 2 1.000000 NA 0.954902 67.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 79900 79971 -1 72 IRb 0.013889 1 0 167 7 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_097 igs trnN-GUU|ycf1 trnN-GUU-ycf1 79972 80312 0 341 IRb 0.018462 6 16 39 116 no 1.000000 2 1.000000 NA 0.953079 56.300000 ycf1 gene ycf1 ycf1 80313 82979 1 2667 IRb 0.010158 27 9 105 18 no 1.000000 2 1.000000 NA 0.996625 48.800000 IGS_098 igs ycf1|ndhD ycf1-ndhD 82980 82988 0 9 SSC 0.000000 0 0 14 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 ndhD gene ndhD ndhD 82989 83145 1 157 SSC 0.038217 6 0 23 15 no 1.000000 2 1.000000 NA 1.000000 60.600000 IGS_099 igs ndhD|rpl32 ndhD-rpl32 83146 83515 0 370 SSC 0.195556 44 145 1 2 yes 1.000000 2 1.000000 NA 0.608108 69.300000 rpl32 gene rpl32 rpl32 83516 83671 -1 156 SSC 0.057692 9 0 75 13 no 1.000000 2 1.000000 NA 1.000000 68.200000 IGS_100 igs rpl32|trnL-UAG rpl32-trnL-UAG 83672 84274 0 603 SSC 0.050699 29 31 5 52 yes 1.000000 2 1.000000 NA 0.948590 77.400000 trnL-UAG tRNA trnL-UAG trnL-UAG 84275 84354 1 80 SSC 0.037500 3 0 25 38 no 1.000000 2 1.000000 NA 1.000000 60.900000 IGS_101 igs trnL-UAG|ndhA trnL-UAG-ndhA 84355 84361 0 7 SSC 0.000000 0 0 5 31 no 0.000000 1 0.000000 NA 1.000000 19.100000 ndhA gene ndhA ndhA 84362 86075 -1 1714 SSC 0.012397 12 746 12 75 no 1.000000 2 1.000000 NA 0.564761 45.200000 IGS_102 igs ndhA|ndhH ndhA-ndhH 86076 86076 0 1 SSC 0.000000 0 0 13 74 no 0.000000 1 0.000000 NA 1.000000 19.700000 ndhH gene ndhH ndhH 86077 87250 -1 1174 SSC 0.010239 12 2 14 63 no 1.000000 2 1.000000 NA 0.998296 50.900000 IGS_103 igs ndhH|rps15 ndhH-rps15 87251 87398 0 148 SSC 0.006944 1 4 37 285 no 1.000000 2 1.000000 NA 0.972973 46.900000 rps15 gene rps15 rps15 87399 87671 -1 273 SSC 0.000000 0 0 84 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_104 igs rps15|ycf1 rps15-ycf1 87672 87981 0 310 SSC 0.012903 4 0 300 217 no 1.000000 2 1.000000 NA 1.000000 60.100000 ycf1 gene ycf1 ycf1 87982 93480 -1 5499 SSC 0.008443 46 51 6 105 no 1.000000 2 1.000000 NA 0.990726 43.700000 IGS_105 igs ycf1|trnN-GUU ycf1-trnN-GUU 93481 93821 0 341 IRa 0.018462 6 16 116 39 no 1.000000 2 1.000000 NA 0.953079 56.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 93822 93893 1 72 IRa 0.013889 1 0 7 167 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_106 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 93894 94403 0 510 IRa 0.032854 16 23 32 238 no 1.000000 2 1.000000 NA 0.954902 67.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 94404 94482 -1 79 IRa 0.000000 0 0 4 159 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_107 igs trnR-ACG|rrn5 trnR-ACG-rrn5 94483 94732 0 250 IRa 0.008000 2 0 83 169 no 1.000000 2 1.000000 NA 1.000000 48.300000 rrn5 rRNA rrn5 rrn5 94733 94853 -1 121 IRa 0.000000 0 0 8 48 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_108 igs rrn5|rrn4.5 rrn5-rrn4.5 94854 95061 0 208 IRa 0.004808 1 0 129 300 no 1.000000 2 1.000000 NA 1.000000 49.900000 rrn4.5 rRNA rrn4.5 rrn4.5 95062 95164 -1 103 IRa 0.000000 0 0 159 300 no 0.000000 1 0.000000 NA 1.000000 30.700000 IGS_109 igs rrn4.5|rrn23 rrn4.5-rrn23 95165 95262 0 98 IRa 0.000000 0 0 262 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 95263 98069 -1 2807 IRa 0.002138 6 1 300 300 no 1.000000 2 1.000000 NA 0.999644 57.300000 IGS_110 igs rrn23|trnA-UGC rrn23-trnA-UGC 98070 98224 0 155 IRa 0.000000 0 0 203 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 98225 98259 -1 35 IRa 0.000000 0 0 300 271 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 99075 99112 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_113 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 99113 99176 0 64 IRa 0.000000 0 0 300 277 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 99177 99211 -1 35 IRa 0.000000 0 0 300 242 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 100165 100206 -1 42 IRa 0.000000 0 0 21 55 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_116 igs trnI-GAU|rrn16 trnI-GAU-rrn16 100207 100498 0 292 IRa 0.010309 3 1 63 159 no 1.000000 2 1.000000 NA 0.996575 48.500000 rrn16 rRNA rrn16 rrn16 100499 101988 -1 1490 IRa 0.001342 2 0 7 51 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_117 igs rrn16|trnV-GAC rrn16-trnV-GAC 101989 102217 0 229 IRa 0.017467 4 0 300 245 no 1.000000 2 1.000000 NA 1.000000 62.500000 trnV-GAC tRNA trnV-GAC trnV-GAC 102218 102289 -1 72 IRa 0.000000 0 0 18 173 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_118 igs trnV-GAC|rps12 trnV-GAC-rps12 102290 103388 0 1099 IRa 0.007279 8 0 90 209 no 1.000000 2 1.000000 NA 1.000000 54.700000 rps12_part2 gene rps12 rps12 103389 104197 1 809 IRa 0.004950 4 1 204 7 no 1.000000 2 1.000000 NA 0.998764 47.200000 IGS_119 igs rps12|rps7 rps12-rps7 104198 104255 0 58 IRa 0.017241 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 62.400000 rps7 gene rps7 rps7 104256 104723 1 468 IRa 0.000000 0 0 50 287 no 0.000000 1 0.000000 NA 1.000000 26.000000 IGS_120 igs rps7|ndhB rps7-ndhB 104724 104933 0 210 IRa 0.000000 0 0 300 77 no 0.000000 1 0.000000 NA 1.000000 24.500000 ndhB gene ndhB ndhB 104934 107233 1 2300 IRa 0.010276 19 451 300 10 no 1.000000 2 1.000000 NA 0.803913 49.200000 IGS_121 igs ndhB|trnL-CAA ndhB-trnL-CAA 107234 107807 0 574 IRa 0.005226 3 0 6 179 no 1.000000 2 1.000000 NA 1.000000 46.700000 trnL-CAA tRNA trnL-CAA trnL-CAA 107808 107888 1 81 IRa 0.000000 0 0 300 98 no 0.000000 1 0.000000 NA 1.000000 26.100000 IGS_122 igs trnL-CAA|ycf2 trnL-CAA-ycf2 107889 108841 0 953 IRa 0.014815 14 8 300 300 no 1.000000 2 1.000000 NA 0.991605 68.100000 ycf2 gene ycf2 ycf2 108842 115498 -1 6657 IRa 0.009335 62 15 7 151 no 1.000000 2 1.000000 NA 0.997747 43.600000 IGS_123 igs ycf2|trnI-CAU ycf2-trnI-CAU 115499 115566 0 68 IRa 0.000000 0 0 69 83 no 0.000000 1 0.000000 NA 1.000000 23.900000 trnI-CAU tRNA trnI-CAU trnI-CAU 115567 115640 1 74 IRa 0.000000 0 0 137 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_124 igs trnI-CAU|rpl23 trnI-CAU-rpl23 115641 115805 0 165 IRa 0.018182 3 0 211 300 no 1.000000 2 1.000000 NA 1.000000 63.000000 rpl23 gene rpl23 rpl23 115806 116087 1 282 IRa 0.000000 0 108 5 135 no 1.000000 2 1.000000 NA 0.617021 33.400000 IGS_125 igs rpl23|rpl2 rpl23-rpl2 116088 116119 0 32 IRa NA 0 32 287 103 no 1.000000 2 1.000000 NA 0.000000 32.700000 rpl2 gene rpl2 rpl2 116120 116220 1 101 IRa NA 0 101 300 2 no 1.000000 2 1.000000 NA 0.000000 25.100000 IGS_126 igs rpl2|trnK-UUU rpl2-trnK-UUU 116221 153 0 153 LSC 0.026144 4 0 300 147 no 1.000000 2 1.000000 NA 1.000000 63.600000