primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf4_p1 ycf4 1 ATGAGAGTGACTTTGGGAGT CGTTTGGGTGTTGGAGAAGA 20 20 45.0 50.0 55.8 58.0 0.0 0.0 2.271319 8222 8767 648-649 1.000000 62.7 ycf4_p2 ycf4 2 ATGAGAGTGACTTTGGGAGT TCGTTTGGGTGTTGGAGAAG 20 20 45.0 50.0 55.8 58.0 0.0 0.0 2.271319 8222 8767 649-650 1.000000 62.7 ycf4_p3 ycf4 3 ATGAGAGTGACTTTGGGAGT TTCGTTTGGGTGTTGGAGAA 20 20 45.0 45.0 55.8 57.6 0.0 0.0 2.654864 8222 8767 650-651 1.000000 59.6 ycf4_p4 ycf4 4 ATGAGAGTGACTTTGGGAGT ATTCGTTTGGGTGTTGGAGA 20 20 45.0 45.0 55.8 57.4 0.0 0.0 2.882644 8222 8767 651-652 1.000000 57.8 ycf4_p5 ycf4 5 GTGTTTGGTCACTCTTTCAACT CGTTTGGGTGTTGGAGAAGA 22 20 40.9 50.0 57.0 58.0 0.0 0.0 3.003326 8222 8767 617-618 1.000000 56.9 petA-psbJ_p1 petA-psbJ 1 GCATCTGTCATTTTGGCACA TCCGGATTAGGATCATCCCT 20 20 45.0 50.0 57.3 57.0 0.0 0.0 1.751333 11401 12163 871-871 1.000000 66.9 petA-psbJ_p2 petA-psbJ 2 AGTGCAATTGGTCGAGATGA TCCGGATTAGGATCATCCCT 20 20 45.0 50.0 57.2 57.0 7.7 0.0 1.790896 11401 12163 815-815 1.000000 66.7 petA-psbJ_p3 petA-psbJ 3 GCATCTGTCATTTTGGCACA CGGAAGGATCCCTCTTTGGT 20 20 45.0 55.0 57.3 59.1 0.0 8.6 1.816203 11401 12163 956-956 1.000000 66.3 petA-psbJ_p4 petA-psbJ 4 AGTGCAATTGGTCGAGATGA CGGAAGGATCCCTCTTTGGT 20 20 45.0 55.0 57.2 59.1 7.7 8.6 1.855767 11401 12163 900-900 1.000000 66.0 petA-psbJ_p5 petA-psbJ 5 GCATCTGTCATTTTGGCACA GGAAGGATCCCTCTTTGGTT 20 20 45.0 50.0 57.3 56.8 0.0 8.6 1.933824 11401 12163 955-955 1.000000 65.4 petG-trnW-CCA_p1 petG-trnW-CCA 1 CGACGTGGTGATCAATTGGA CTCCAAAACCTGATGCCGTA 20 20 50.0 50.0 58.3 57.9 5.4 0.0 0.387145 14495 14613 188-188 1.000000 81.2 petG-trnW-CCA_p2 petG-trnW-CCA 2 CGACGTGGTGATCAATTGGA TCCAAAACCTGATGCCGTAG 20 20 50.0 50.0 58.3 57.9 5.4 0.0 0.387145 14495 14613 187-187 1.000000 81.2 petG-trnW-CCA_p3 petG-trnW-CCA 3 CGACGTGGTGATCAATTGGA AGCGCTCTTAGTTCAGTTGG 20 20 50.0 50.0 58.3 57.9 5.4 2.6 0.365250 14495 14613 221-221 1.000000 80.7 petG-trnW-CCA_p4 petG-trnW-CCA 4 CGACGTGGTGATCAATTGGA GTTCAGTTGGGTAGAACGCA 20 20 50.0 50.0 58.3 58.1 5.4 0.0 0.405498 14495 14613 211-211 1.000000 80.5 petG-trnW-CCA_p5 petG-trnW-CCA 5 CGACGTGGTGATCAATTGGA TTCAGTTGGGTAGAACGCAG 20 20 50.0 50.0 58.3 57.8 5.4 0.0 0.443013 14495 14613 210-210 1.000000 80.3 clpP-accD_p1 clpP-accD 1 ATTATAGCGGATACTCGTAAG CATGGTTCCACGGGCTATTT 21 20 38.1 50.0 52.2 58.2 0.0 0.0 6.995946 18854 19778 1022-1130 1.000000 42.3 clpP-accD_p2 clpP-accD 2 ATTATAGCGGATACTCGTAAG TTGATACCATGGTTCCACGG 21 20 38.1 50.0 52.2 57.6 0.0 25.4 7.170281 18854 19778 1029-1137 1.000000 42.3 clpP-accD_p3 clpP-accD 3 ATTATAGCGGATACTCGTAAG ATGGTTCCACGGGCTATTTT 21 20 38.1 45.0 52.2 57.5 0.0 0.0 7.283758 18854 19778 1021-1129 1.000000 42.3 clpP-accD_p4 clpP-accD 4 TATTATAGCGGATACTCGTAAG CATGGTTCCACGGGCTATTT 22 20 36.4 50.0 52.3 58.2 0.0 0.0 7.893247 18854 19778 1023-1131 1.000000 42.3 clpP-accD_p5 clpP-accD 5 ATTATAGCGGATACTCGTAAG TGGTTCCACGGGCTATTTTA 21 20 38.1 45.0 52.2 56.8 0.0 0.0 7.934871 18854 19778 1020-1128 1.000000 42.3 accD_p1 accD 1 TTGACCGATGCCTGTTTGAA TGCAGCACGTCTAAAAGAGA 20 20 45.0 45.0 58.0 57.2 0.0 0.0 0.838093 20745 20864 802-1018 1.000000 82.5 accD_p2 accD 2 ACCTACTACCGAGCCCATAC TGCAGCACGTCTAAAAGAGA 20 20 55.0 45.0 58.0 57.2 0.0 0.0 0.819821 20745 20864 877-1093 1.000000 82.3 accD_p3 accD 3 CACCTACTACCGAGCCCATA TGCAGCACGTCTAAAAGAGA 20 20 55.0 45.0 58.0 57.2 0.0 0.0 0.821237 20745 20864 878-1094 1.000000 82.3 accD_p4 accD 4 GCCAGAAGCACATACGAGAA TGCAGCACGTCTAAAAGAGA 20 20 50.0 45.0 58.0 57.2 0.0 0.0 0.822503 20745 20864 949-1165 1.000000 82.0 accD_p5 accD 5 ACCTACTACCGAGCCCATAC ACTTTTTGGGTGGACTTCCA 20 20 55.0 45.0 58.0 57.2 0.0 0.0 0.846099 20745 20864 911-1127 1.000000 82.0 chlB-trnQ-UUG_p1 chlB-trnQ-UUG 1 GAGCAGGACCAGCATACATC TGGTCCTGTTATTGCGAAGG 20 20 55.0 50.0 58.1 57.9 11.9 0.0 0.231628 26273 26455 260-261 1.000000 80.3 chlB-trnQ-UUG_p2 chlB-trnQ-UUG 2 GAGCAGGACCAGCATACATC GGTCCTGTTATTGCGAAGGT 20 20 55.0 50.0 58.1 57.9 11.9 0.0 0.233103 26273 26455 259-260 1.000000 80.3 chlB-trnQ-UUG_p3 chlB-trnQ-UUG 3 AGAGGAGCATGCATTATGGC TGGTCCTGTTATTGCGAAGG 20 20 50.0 50.0 58.1 57.9 22.0 0.0 0.200960 26273 26455 324-325 1.000000 80.1 chlB-trnQ-UUG_p4 chlB-trnQ-UUG 4 AGAGGAGCATGCATTATGGC GGTCCTGTTATTGCGAAGGT 20 20 50.0 50.0 58.1 57.9 22.0 0.0 0.202435 26273 26455 323-324 1.000000 80.1 chlB-trnQ-UUG_p5 chlB-trnQ-UUG 5 AGCTACTCGTAGGGTTCCAA TGGTCCTGTTATTGCGAAGG 20 20 50.0 50.0 57.8 57.9 6.3 0.0 0.334912 26273 26455 283-284 1.000000 79.3 psbK-psbI_p1 psbK-psbI 1 CAAGCTGCCGTAAGTTTTCG TCACTGTTCTTTACGCCCAG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.213346 27047 27669 761-780 1.000000 79.8 psbK-psbI_p2 psbK-psbI 2 AGCTGCCGTAAGTTTTCGAT TCACTGTTCTTTACGCCCAG 20 20 45.0 50.0 57.9 57.8 0.0 0.0 0.258580 27047 27669 759-778 1.000000 79.5 psbK-psbI_p3 psbK-psbI 3 AAGCTGCCGTAAGTTTTCGA TCACTGTTCTTTACGCCCAG 20 20 45.0 50.0 58.1 57.8 0.0 0.0 0.290120 27047 27669 760-779 1.000000 79.2 psbK-psbI_p4 psbK-psbI 4 GAGGCTTATGCGATTTCCGA TCACTGTTCTTTACGCCCAG 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.297953 27047 27669 842-861 1.000000 79.0 psbK-psbI_p5 psbK-psbI 5 CAAGCTGCCGTAAGTTTTCG CTGTTCTTTACGCCCAGGAT 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.452780 27047 27669 758-777 1.000000 77.9 trnS-GCU_p1 trnS-GCU 1 CTGGGCGTAAAGAACAGTGA TCGCAAATCGCAAATGTTGG 20 20 50.0 45.0 57.8 58.3 0.0 0.0 0.468005 27821 27908 191-191 1.000000 77.5 trnS-GCU_p2 trnS-GCU 2 CTGGGCGTAAAGAACAGTGA GGATTCTCGCAAATCGCAAA 20 20 50.0 45.0 57.8 57.5 0.0 4.3 0.706584 27821 27908 197-197 1.000000 75.6 trnS-GCU_p3 trnS-GCU 3 ATCCTGGGCGTAAAGAACAG TCGCAAATCGCAAATGTTGG 20 20 50.0 45.0 57.6 58.3 0.0 0.0 0.707439 27821 27908 194-194 1.000000 75.6 trnS-GCU_p4 trnS-GCU 4 CTGGGCGTAAAGAACAGTGA TGGATTCTCGCAAATCGCAA 20 20 50.0 45.0 57.8 58.6 0.0 4.3 0.715873 27821 27908 198-198 1.000000 75.5 trnS-GCU_p5 trnS-GCU 5 CTGGGCGTAAAGAACAGTGA TTGGATTCTCGCAAATCGCA 20 20 50.0 45.0 57.8 58.6 0.0 4.3 0.715873 27821 27908 199-199 1.000000 75.5 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CGTTGCCTCCTTGAAAGAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.175803 48792 49795 1099-1109 1.000000 79.9 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CGTTGCCTCCTTGAAAGAGA TGAACACCGGGTTTTGTAGG 20 20 50.0 50.0 57.8 58.0 0.0 6.3 0.199741 48792 49795 1148-1158 1.000000 79.7 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 CGTTGCCTCCTTGAAAGAGA CCTGAACACCGGGTTTTGTA 20 20 50.0 50.0 57.8 58.0 0.0 6.3 0.199741 48792 49795 1150-1160 1.000000 79.6 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 CGTTGCCTCCTTGAAAGAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.8 58.1 0.0 0.0 0.233900 48792 49795 1078-1088 1.000000 79.5 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CGTTGCCTCCTTGAAAGAGA TGGCGTTACTCTACCACTGA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.256054 48792 49795 1075-1085 1.000000 79.3 psaA-ycf3_p1 psaA-ycf3 1 ATAGGATCCCTCTCCACCAC TGGTTTGATCAAGCTGCTGA 20 20 55.0 45.0 57.6 57.7 8.6 19.9 0.682474 59602 60199 753-767 1.000000 76.7 psaA-ycf3_p2 psaA-ycf3 2 ATAGGATCCCTCTCCACCAC CGGAGGCTTGGTTTGATCAA 20 20 55.0 50.0 57.6 58.5 8.6 3.4 0.873715 59602 60199 761-775 1.000000 75.2 psaA-ycf3_p3 psaA-ycf3 3 ATAGGATCCCTCTCCACCAC TGGAAACAAGCTATAGCGCT 20 20 55.0 45.0 57.6 57.3 8.6 17.3 1.098749 59602 60199 729-743 1.000000 73.5 psaA-ycf3_p4 psaA-ycf3 4 AAATGACCAGGTTTAGCCCA TGGTTTGATCAAGCTGCTGA 20 20 45.0 45.0 57.0 57.7 0.0 19.9 1.265874 59602 60199 792-806 1.000000 72.0 psaA-ycf3_p5 psaA-ycf3 5 TGACCAGGTTTAGCCCATTT TGGTTTGATCAAGCTGCTGA 20 20 45.0 45.0 57.0 57.7 0.0 19.9 1.265874 59602 60199 789-803 1.000000 72.0 rps4-trnQ-UUG_p1 rps4-trnQ-UUG 1 TTTTAAACGAGGTCCGCGAT CCTTCGCAATAACAGGACCA 20 20 45.0 50.0 57.9 57.9 22.6 0.0 0.191116 63592 64142 616-638 1.000000 82.8 rps4-trnQ-UUG_p2 rps4-trnQ-UUG 2 TTTTAAACGAGGTCCGCGAT ACCTTCGCAATAACAGGACC 20 20 45.0 50.0 57.9 57.9 22.6 0.0 0.192591 63592 64142 617-639 1.000000 82.8 rps4-trnQ-UUG_p3 rps4-trnQ-UUG 3 TTTTTAAACGAGGTCCGCGA CCTTCGCAATAACAGGACCA 20 20 45.0 50.0 58.1 57.9 22.6 0.0 0.244683 63592 64142 617-639 1.000000 82.4 rps4-trnQ-UUG_p4 rps4-trnQ-UUG 4 TTTCTTGACAAGTCGCTCCC CCTTCGCAATAACAGGACCA 20 20 50.0 50.0 58.1 57.9 14.7 0.0 0.228997 63592 64142 694-716 1.000000 82.0 rps4-trnQ-UUG_p5 rps4-trnQ-UUG 5 TTTCTTGACAAGTCGCTCCC ACCTTCGCAATAACAGGACC 20 20 50.0 50.0 58.1 57.9 14.7 0.0 0.230472 63592 64142 695-717 1.000000 82.0 trnH-GUG-psbA_p1 trnH-GUG-psbA 1 TCTGGTCGGTTTTTCATCGG GTAACGCTCACAACTTCCCT 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.361985 77005 77291 443-443 1.000000 79.3 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 TCTGGTCGGTTTTTCATCGG TGGAAGTTATGCACGAACGT 20 20 50.0 45.0 58.2 57.8 0.0 7.5 0.354500 77005 77291 461-461 1.000000 79.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 TCTGGTCGGTTTTTCATCGG GTTATGCACGAACGTAACGC 20 20 50.0 50.0 58.2 58.2 0.0 13.5 0.419156 77005 77291 456-456 1.000000 78.8 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 TCTGGTCGGTTTTTCATCGG TTATGCACGAACGTAACGCT 20 20 50.0 45.0 58.2 58.3 0.0 13.5 0.496143 77005 77291 455-455 1.000000 78.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAATCCACTGCCTTTGGAC TGGAAGTTATGCACGAACGT 20 20 50.0 45.0 58.4 57.8 0.4 7.5 0.537012 77005 77291 404-404 1.000000 78.1 chlN-ycf1_p1 chlN-ycf1 1 GAAGACTTGGATCGGACCAC CCAATACGACATCATGGCCA 20 20 55.0 50.0 58.0 58.0 0.0 8.6 0.045605 81407 82513 999-1379 1.000000 86.0 chlN-ycf1_p2 chlN-ycf1 2 ACTTGGATCGGACCACCTTA CCAATACGACATCATGGCCA 20 20 50.0 50.0 58.1 58.0 1.3 8.6 0.087081 81407 82513 995-1375 1.000000 85.6 chlN-ycf1_p3 chlN-ycf1 3 TTGGATCGGACCACCTTAGT CCAATACGACATCATGGCCA 20 20 50.0 50.0 58.1 58.0 1.3 8.6 0.087081 81407 82513 993-1373 1.000000 85.6 chlN-ycf1_p4 chlN-ycf1 4 AGAAGACTTGGATCGGACCA CCAATACGACATCATGGCCA 20 20 50.0 50.0 58.1 58.0 0.0 8.6 0.095481 81407 82513 1000-1380 1.000000 85.6 chlN-ycf1_p5 chlN-ycf1 5 CTTGGATCGGACCACCTTAG CCAATACGACATCATGGCCA 20 20 55.0 50.0 57.4 58.0 1.3 8.6 0.638111 81407 82513 994-1374 1.000000 81.2 ycf1_p1 ycf1 1 ACCAAGGGACCGAAAATAGC TTCTTGGAAAACCAGGGAGC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.128901 88808 88957 748-1294 1.000000 90.5 ycf1_p2 ycf1 2 ACCAAGGGACCGAAAATAGC TCCCTTTGCCAATATCGGTG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.175612 88808 88957 833-1379 1.000000 89.6 ycf1_p3 ycf1 3 ACCAAGGGACCGAAAATAGC GTCAATGTCTCCCTTTGCCA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.214577 88808 88957 842-1388 1.000000 89.2 ycf1_p4 ycf1 4 ACCAAGGGACCGAAAATAGC CGGTCATTAAAGTACCCCGG 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.180246 88808 88957 997-1543 1.000000 88.8 ycf1_p5 ycf1 5 ACCAAGGGACCGAAAATAGC ACAGTTTGATTCGATCCGCA 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.217583 88808 88957 963-1509 1.000000 88.6 trnI-GAU-rrn16_p1 trnI-GAU-rrn16 1 ACAACGACGCGATTATCAGG GTAGCTGTACTGGAAGGTGC 20 20 50.0 55.0 58.4 58.0 15.9 0.0 0.454976 111811 113217 1248-1611 1.000000 85.4 trnI-GAU-rrn16_p2 trnI-GAU-rrn16 2 ACAACGACGCGATTATCAGG GACCGGAGTGAAGTCGTAAC 20 20 50.0 55.0 58.4 58.0 15.9 9.5 0.468950 111811 113217 1271-1634 1.000000 85.2 trnI-GAU-rrn16_p3 trnI-GAU-rrn16 3 CACAACGACGCGATTATCAG GTAGCTGTACTGGAAGGTGC 20 20 50.0 55.0 57.4 58.0 15.9 0.0 0.622514 111811 113217 1249-1612 1.000000 84.1 trnI-GAU-rrn16_p4 trnI-GAU-rrn16 4 CACAACGACGCGATTATCAG GACCGGAGTGAAGTCGTAAC 20 20 50.0 55.0 57.4 58.0 15.9 9.5 0.636487 111811 113217 1272-1635 1.000000 83.9 trnI-GAU-rrn16_p5 trnI-GAU-rrn16 5 ACAACGACGCGATTATCAGG TGACCGGAGTGAAGTCGTAA 20 20 50.0 50.0 58.4 58.4 15.9 9.5 0.835382 111811 113217 1272-1635 1.000000 82.3 rrn16-rps12_p1 rrn16-rps12 1 ACTTCCCGTTTGACTTGCAT TGGCAACTTTACGTAAGGCA 20 20 45.0 45.0 58.0 57.7 0.0 16.5 0.276434 114731 116296 1687-1758 1.000000 79.0 rrn16-rps12_p2 rrn16-rps12 2 AAACACCACTTCCCGTTTGA TGGCAACTTTACGTAAGGCA 20 20 45.0 45.0 57.9 57.7 0.0 16.5 0.389467 114731 116296 1694-1765 1.000000 78.1 rrn16-rps12_p3 rrn16-rps12 3 ACTTCCCGTTTGACTTGCAT AATCGCACTCTGGCAACTTT 20 20 45.0 45.0 58.0 58.4 0.0 0.0 0.409536 114731 116296 1697-1768 1.000000 78.0 rrn16-rps12_p4 rrn16-rps12 4 ACTTCCCGTTTGACTTGCAT ATCGCACTCTGGCAACTTTA 20 20 45.0 45.0 58.0 57.5 0.0 0.0 0.491439 114731 116296 1696-1767 1.000000 77.3 rrn16-rps12_p5 rrn16-rps12 5 ACTTCCCGTTTGACTTGCAT TAATCGCACTCTGGCAACTT 20 20 45.0 45.0 58.0 57.5 0.0 0.0 0.491439 114731 116296 1698-1769 1.000000 77.3 ycf2_p1 ycf2 1 TCCATCCGGGATCTGATGAA TTGGGTTTTCTCAAGGTCCG 20 20 50.0 50.0 57.9 58.0 6.5 0.0 0.125980 127292 127411 899-1088 1.000000 84.8 ycf2_p2 ycf2 2 TCCATCCGGGATCTGATGAA TCTCAGATAACCAAGGCCCA 20 20 50.0 50.0 57.9 58.0 6.5 0.0 0.136225 127292 127411 849-1038 1.000000 84.8 ycf2_p3 ycf2 3 TCCATCCGGGATCTGATGAA TATCAACGTCGCTTGCTCAA 20 20 50.0 45.0 57.9 57.9 6.5 0.0 0.174756 127292 127411 934-1123 1.000000 84.3 ycf2_p4 ycf2 4 TCCATCCGGGATCTGATGAA AAGTTGGGGAAGTCATTCGG 20 20 50.0 50.0 57.9 57.8 6.5 0.0 0.302012 127292 127411 827-1016 1.000000 83.5 ycf2_p5 ycf2 5 TCCATCCGGGATCTGATGAA GGTTTTCTCAAGGTCCGACA 20 20 50.0 50.0 57.9 57.8 6.5 0.0 0.351483 127292 127411 896-1085 1.000000 83.0