feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score rps11 gene rps11 rps11 345 722 1 378 Genome 0.002058 2 0 26 0 no 0.111111 3 0.333333 0.002058 1.000000 24.000000 IGS_001 igs rps11|rpoA rps11-rpoA 723 782 0 60 Genome 0.009259 1 0 195 300 no 0.000000 2 0.000000 0.009259 1.000000 39.600000 rpoA gene rpoA rpoA 783 1787 1 1005 Genome 0.001216 4 0 59 13 no 0.111111 3 0.333333 0.001216 1.000000 29.100000 IGS_002 igs rpoA|petD rpoA-petD 1788 1981 0 194 Genome 0.001145 1 0 259 18 no 0.111111 2 0.500000 0.001145 1.000000 23.300000 petD gene petD petD 1982 3097 -1 1116 Genome 0.001941 5 12 180 300 no 0.222222 5 0.400000 0.001958 1.000000 45.300000 IGS_003 igs petD|petB petD-petB 3098 3283 0 186 Genome 0.000000 0 0 72 300 no 0.000000 1 0.000000 0.000000 1.000000 24.100000 petB gene petB petB 3284 4694 -1 1411 Genome 0.000984 5 5 258 71 no 0.333333 5 0.600000 0.000987 1.000000 37.900000 IGS_004 igs petB|psbH petB-psbH 4695 4848 0 154 Genome 0.003608 1 0 162 51 no 0.000000 2 0.000000 0.003608 1.000000 25.000000 psbH gene psbH psbH 4849 5076 -1 228 Genome 0.000975 1 0 82 228 no 0.111111 2 0.500000 0.000975 1.000000 28.000000 IGS_005 igs psbH|psbN psbH-psbN 5077 5154 0 78 Genome 0.000000 0 0 176 150 no 0.000000 1 0.000000 0.000000 1.000000 30.000000 psbN gene psbN psbN 5155 5286 1 132 Genome 0.000000 0 0 254 18 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_006 igs psbN|psbT psbN-psbT 5287 5356 0 70 Genome 0.006349 2 0 300 125 no 0.111111 2 0.500000 0.006349 1.000000 36.600000 psbT gene psbT psbT 5357 5464 -1 108 Genome 0.000000 0 0 46 17 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_007 igs psbT|psbB psbT-psbB 5465 5647 0 183 Genome 0.003036 1 0 154 300 no 0.000000 2 0.000000 0.003036 1.000000 32.300000 psbB gene psbB psbB 5648 7174 -1 1527 Genome 0.001201 4 0 165 126 no 0.222222 4 0.500000 0.001201 1.000000 39.400000 IGS_008 igs psbB|psaI psbB-psaI 7175 7517 0 343 Genome 0.003725 3 0 300 258 no 0.222222 4 0.500000 0.003725 1.000000 41.600000 psaI gene psaI psaI 7518 7628 1 111 Genome 0.000000 0 0 18 147 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_009 igs psaI|ycf4 psaI-ycf4 7629 8221 0 593 Genome 0.001312 2 17 129 65 no 0.222222 4 0.500000 0.001347 0.976391 37.700000 ycf4 gene ycf4 ycf4 8222 8767 1 546 Genome 0.003867 6 0 300 222 yes 0.444444 6 0.666667 0.003867 1.000000 50.300000 IGS_010 igs ycf4|cemA ycf4-cemA 8768 9440 0 673 Genome 0.001568 4 6 69 300 no 0.222222 4 0.500000 0.001575 1.000000 36.900000 cemA gene cemA cemA 9441 10226 1 786 Genome 0.000283 1 0 251 150 no 0.111111 2 0.500000 0.000283 1.000000 38.600000 IGS_011 igs cemA|petA cemA-petA 10227 10434 0 208 Genome 0.001068 1 0 300 80 no 0.111111 2 0.500000 0.001068 1.000000 27.900000 petA gene petA petA 10435 11400 1 966 Genome 0.000978 3 0 57 3 no 0.222222 4 0.500000 0.000978 1.000000 30.200000 IGS_012 igs petA|psbJ petA-psbJ 11401 12163 0 763 Genome 0.003713 10 0 195 217 yes 0.222222 5 0.400000 0.003713 1.000000 47.100000 psbJ gene psbJ psbJ 12164 12286 -1 123 Genome 0.000000 0 0 85 94 no 0.000000 1 0.000000 0.000000 1.000000 25.100000 IGS_013 igs psbJ|psbL psbJ-psbL 12287 12401 0 115 Genome 0.001932 1 0 208 300 no 0.111111 2 0.500000 0.001932 1.000000 37.800000 psbL gene psbL psbL 12402 12518 -1 117 Genome 0.000000 0 0 20 300 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_014 igs psbL|psbF psbL-psbF 12519 12549 0 31 Genome 0.000000 0 0 137 300 no 0.000000 1 0.000000 0.000000 1.000000 29.000000 psbF gene psbF psbF 12550 12669 -1 120 Genome 0.000000 0 0 168 300 no 0.000000 1 0.000000 0.000000 1.000000 31.400000 IGS_015 igs psbF|psbE psbF-psbE 12670 12678 0 9 Genome 0.000000 0 0 288 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 12679 12936 -1 258 Genome 0.000000 0 0 297 225 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_016 igs psbE|petL psbE-petL 12937 14164 0 1228 Genome 0.001448 6 0 300 248 no 0.222222 5 0.400000 0.001448 1.000000 45.400000 petL gene petL petL 14165 14260 1 96 Genome 0.000000 0 0 106 152 no 0.000000 1 0.000000 0.000000 1.000000 26.700000 IGS_017 igs petL|petG petL-petG 14261 14380 0 120 Genome 0.000000 0 0 202 32 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 petG gene petG petG 14381 14494 1 114 Genome 0.003411 1 0 300 12 no 0.000000 2 0.000000 0.003411 1.000000 22.300000 IGS_018 igs petG|trnW-CCA petG-trnW-CCA 14495 14613 0 119 Genome 0.043417 10 0 81 142 yes 0.222222 4 0.500000 0.043417 1.000000 59.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 14614 14687 -1 74 Genome 0.000000 0 0 46 68 no 0.000000 1 0.000000 0.000000 1.000000 22.200000 IGS_019 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 14688 14832 0 145 Genome 0.003831 1 0 120 171 no 0.000000 2 0.000000 0.003831 1.000000 30.300000 trnP-UGG tRNA trnP-UGG trnP-UGG 14833 14906 -1 74 Genome 0.000000 0 0 76 97 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 IGS_020 igs trnP-UGG|psaJ trnP-UGG-psaJ 14907 15191 0 285 Genome 0.003899 5 0 150 300 no 0.111111 2 0.500000 0.003899 1.000000 36.000000 psaJ gene psaJ psaJ 15192 15326 1 135 Genome 0.000000 0 0 146 300 no 0.000000 1 0.000000 0.000000 1.000000 29.700000 IGS_021 igs psaJ|rpl33 psaJ-rpl33 15327 15654 0 328 Genome 0.000000 0 0 281 183 no 0.000000 1 0.000000 0.000000 1.000000 33.100000 rpl33 gene rpl33 rpl33 15655 15855 1 201 Genome 0.002488 1 0 300 3 no 0.000000 2 0.000000 0.002488 1.000000 20.700000 IGS_022 igs rpl33|rps18 rpl33-rps18 15856 15980 0 125 Genome 0.004444 1 0 17 25 no 0.000000 2 0.000000 0.004444 1.000000 23.000000 rps18 gene rps18 rps18 15981 16370 1 390 Genome 0.003276 3 24 121 96 no 0.222222 4 0.500000 0.003491 0.938462 38.600000 IGS_023 igs rps18|rpl20 rps18-rpl20 16371 16615 0 245 Genome 0.006948 5 10 5 293 no 0.333333 5 0.600000 0.006540 1.000000 36.000000 rpl20 gene rpl20 rpl20 16616 17005 -1 390 Genome 0.000570 1 0 58 57 no 0.111111 2 0.500000 0.000570 1.000000 27.600000 IGS_024 igs rpl20|rps12 rpl20-rps12 17006 17693 0 688 Genome 0.001938 3 0 96 134 no 0.222222 4 0.500000 0.001938 1.000000 37.800000 rps12_part1 gene rps12 rps12 17694 17807 -1 114 Genome 0.000000 0 0 300 20 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_025 igs rps12|clpP rps12-clpP 17808 18136 0 329 Genome 0.003208 4 0 300 32 no 0.222222 4 0.500000 0.003208 1.000000 28.900000 clpP gene clpP clpP 18137 18853 1 717 Genome 0.005734 9 0 154 3 no 0.222222 4 0.500000 0.005734 1.000000 33.500000 IGS_026 igs clpP|accD clpP-accD 18854 19778 0 925 Genome 0.010871 28 3 35 189 yes 0.444444 6 0.666667 0.010906 0.996757 44.900000 accD gene accD accD 19779 22937 -1 3159 Genome 0.008265 71 233 27 22 yes 0.666667 7 0.857143 0.006417 0.969611 47.200000 IGS_027 igs accD|rps16 accD-rps16 22938 23608 0 671 Genome 0.005464 12 23 158 5 no 0.222222 4 0.500000 0.005658 0.965723 37.400000 rps16 gene rps16 rps16 23609 24655 -1 1047 Genome 0.004351 14 18 20 42 no 0.222222 5 0.400000 0.004427 0.982808 35.900000 IGS_028 igs rps16|chlB rps16-chlB 24656 24730 0 75 Genome 0.002963 1 0 52 300 no 0.111111 2 0.500000 0.002963 1.000000 27.700000 chlB gene chlB chlB 24731 26272 -1 1542 Genome 0.000757 3 0 32 7 no 0.222222 4 0.500000 0.000757 1.000000 30.200000 IGS_029 igs chlB|trnQ-UUG chlB-trnQ-UUG 26273 26455 0 183 Genome 0.013965 7 0 252 245 yes 0.111111 3 0.333333 0.013965 1.000000 46.900000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 26456 26528 -1 73 Genome 0.000000 0 0 36 172 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 IGS_030 igs trnQ-UUG|psbK trnQ-UUG-psbK 26529 26860 0 332 Genome 0.000669 1 0 109 11 no 0.111111 2 0.500000 0.000669 1.000000 23.000000 psbK gene psbK psbK 26861 27046 1 186 Genome 0.002688 1 0 159 21 no 0.000000 2 0.000000 0.002688 1.000000 22.200000 IGS_031 igs psbK|psbI psbK-psbI 27047 27669 0 623 Genome 0.005101 9 6 174 197 yes 0.222222 4 0.500000 0.004659 0.998395 47.400000 psbI gene psbI psbI 27670 27783 1 114 Genome 0.000000 0 0 210 83 no 0.000000 1 0.000000 0.000000 1.000000 25.000000 IGS_032 igs psbI|trnS-GCU psbI-trnS-GCU 27784 27820 0 37 Genome 0.000000 0 0 300 46 no 0.000000 1 0.000000 0.000000 1.000000 22.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 27821 27908 -1 88 Genome 0.010732 3 0 300 281 yes 0.222222 4 0.500000 0.010732 1.000000 47.000000 IGS_033 igs trnS-GCU|psaM trnS-GCU-psaM 27909 28055 0 147 Genome 0.000000 0 0 3 134 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 psaM gene psaM psaM 28056 28145 -1 90 Genome 0.000000 0 0 150 44 no 0.000000 1 0.000000 0.000000 1.000000 22.100000 IGS_034 igs psaM|trnG-UCC psaM-trnG-UCC 28146 28566 0 421 Genome 0.003563 4 9 240 162 no 0.333333 5 0.600000 0.003590 1.000000 45.000000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 28567 28589 1 23 Genome 0.000000 0 0 189 139 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 29432 29479 1 48 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_037 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 29480 29659 0 180 Genome 0.000000 0 2 300 240 no 0.111111 3 0.333333 0.000000 0.988889 36.900000 trnR-UCU tRNA trnR-UCU trnR-UCU 29660 29731 1 72 Genome 0.000000 0 0 300 168 no 0.000000 1 0.000000 0.000000 1.000000 31.400000 IGS_038 igs trnR-UCU|atpA trnR-UCU-atpA 29732 29840 0 109 Genome 0.000000 0 0 300 59 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 atpA gene atpA atpA 29841 31364 -1 1524 Genome 0.000766 3 6 300 300 no 0.111111 4 0.250000 0.000767 1.000000 43.100000 IGS_039 igs atpA|atpF atpA-atpF 31365 31427 0 63 Genome 0.000000 0 0 68 300 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 atpF gene atpF atpF 31428 32681 -1 1254 Genome 0.000177 1 9 131 10 no 0.333333 5 0.600000 0.000178 0.998405 33.000000 IGS_040 igs atpF|atpH atpF-atpH 32682 32999 0 318 Genome 0.006988 5 0 300 300 no 0.222222 5 0.400000 0.006988 1.000000 43.400000 atpH gene atpH atpH 33000 33245 -1 246 Genome 0.000000 0 0 66 158 no 0.000000 1 0.000000 0.000000 1.000000 23.700000 IGS_041 igs atpH|atpI atpH-atpI 33246 33872 0 627 Genome 0.001152 2 4 300 300 no 0.111111 4 0.250000 0.001158 0.993620 43.600000 atpI gene atpI atpI 33873 34619 -1 747 Genome 0.001413 2 0 300 162 no 0.111111 3 0.333333 0.001413 1.000000 40.200000 IGS_042 igs atpI|rps2 atpI-rps2 34620 34842 0 223 Genome 0.000997 1 0 239 243 no 0.111111 2 0.500000 0.000997 1.000000 36.800000 rps2 gene rps2 rps2 34843 35550 -1 708 Genome 0.000863 2 0 60 96 no 0.222222 3 0.666667 0.000863 1.000000 34.400000 IGS_043 igs rps2|rpoC2 rps2-rpoC2 35551 35695 0 145 Genome 0.001533 1 0 25 78 no 0.111111 2 0.500000 0.001533 1.000000 24.300000 rpoC2 gene rpoC2 rpoC2 35696 39307 -1 3612 Genome 0.001015 10 27 48 274 no 0.222222 4 0.500000 0.001022 0.993355 30.200000 IGS_044 igs rpoC2|rpoC1 rpoC2-rpoC1 39308 39399 0 92 Genome 0.000000 0 0 246 182 no 0.000000 1 0.000000 0.000000 1.000000 32.400000 rpoC1 gene rpoC1 rpoC1 39400 42179 -1 2780 Genome 0.000460 3 0 300 300 no 0.111111 3 0.333333 0.000460 1.000000 39.800000 IGS_045 igs rpoC1|rpoB rpoC1-rpoB 42180 42206 0 27 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpoB gene rpoB rpoB 42207 45479 -1 3273 Genome 0.000713 7 0 300 80 no 0.333333 5 0.600000 0.000713 1.000000 34.300000 IGS_046 igs rpoB|trnC-GCA rpoB-trnC-GCA 45480 46118 0 639 Genome 0.001739 2 1 300 87 no 0.222222 4 0.500000 0.001739 1.000000 37.100000 trnC-GCA tRNA trnC-GCA trnC-GCA 46119 46189 1 71 Genome 0.000000 0 0 300 16 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_047 igs trnC-GCA|petN trnC-GCA-petN 46190 46462 0 273 Genome 0.006105 5 0 300 153 no 0.222222 4 0.500000 0.006105 1.000000 39.400000 petN gene petN petN 46463 46552 1 90 Genome 0.000000 0 0 20 63 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_048 igs petN|psbM petN-psbM 46553 47154 0 602 Genome 0.005722 12 0 110 109 no 0.444444 6 0.666667 0.005722 1.000000 46.600000 psbM gene psbM psbM 47155 47259 -1 105 Genome 0.000000 0 0 6 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_049 igs psbM|trnD-GUC psbM-trnD-GUC 47260 48314 0 1055 Genome 0.002633 7 0 111 124 no 0.333333 5 0.600000 0.002633 1.000000 41.600000 trnD-GUC tRNA trnD-GUC trnD-GUC 48315 48388 -1 74 Genome 0.000000 0 0 58 50 no 0.000000 1 0.000000 0.000000 1.000000 22.500000 IGS_050 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 48389 48579 0 191 Genome 0.004072 2 0 132 300 no 0.111111 3 0.333333 0.004072 1.000000 33.900000 trnY-GUA tRNA trnY-GUA trnY-GUA 48580 48663 -1 84 Genome 0.000000 0 0 91 220 no 0.000000 1 0.000000 0.000000 1.000000 25.600000 IGS_051 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 48664 48718 0 55 Genome 0.000000 0 0 175 165 no 0.000000 1 0.000000 0.000000 1.000000 31.100000 trnE-UUC tRNA trnE-UUC trnE-UUC 48719 48791 -1 73 Genome 0.000000 0 0 230 92 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_052 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 48792 49795 0 1004 Genome 0.002988 8 10 300 300 yes 0.333333 5 0.600000 0.003011 0.999004 49.700000 trnT-GGU tRNA trnT-GGU trnT-GGU 49796 49867 1 72 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_053 igs trnT-GGU|psbD trnT-GGU-psbD 49868 51012 0 1145 Genome 0.001067 4 16 300 272 no 0.222222 5 0.400000 0.001074 0.998253 46.700000 psbD gene psbD psbD 51013 52074 1 1062 Genome 0.000942 3 0 277 300 no 0.222222 4 0.500000 0.000942 1.000000 44.900000 psbC gene psbC psbC 52022 53443 1 1422 Genome 0.001055 4 0 16 8 no 0.222222 4 0.500000 0.001055 1.000000 30.600000 IGS_055 igs psbC|trnS-UGA psbC-trnS-UGA 53444 53622 0 179 Genome 0.009311 3 0 300 300 no 0.000000 2 0.000000 0.009311 1.000000 40.000000 trnS-UGA tRNA trnS-UGA trnS-UGA 53623 53709 -1 87 Genome 0.000000 0 0 168 300 no 0.000000 1 0.000000 0.000000 1.000000 31.400000 IGS_056 igs trnS-UGA|psbZ trnS-UGA-psbZ 53710 53963 0 254 Genome 0.000000 0 0 255 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbZ gene psbZ psbZ 53964 54152 1 189 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_057 igs psbZ|trnG-GCC psbZ-trnG-GCC 54153 54300 0 148 Genome 0.000000 0 1 300 211 no 0.000000 2 0.000000 0.000000 0.993243 34.400000 trnG-GCC tRNA trnG-GCC trnG-GCC 54301 54371 1 71 Genome 0.000000 0 0 300 140 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 IGS_058 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 54372 54485 0 114 Genome 0.000000 0 1 300 26 no 0.000000 2 0.000000 0.000000 1.000000 21.700000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 54486 54559 -1 74 Genome 0.003003 1 0 300 46 no 0.111111 2 0.500000 0.003003 1.000000 27.300000 IGS_059 igs trnfM-CAU|rps14 trnfM-CAU-rps14 54560 54696 0 137 Genome 0.008110 2 0 47 300 no 0.111111 3 0.333333 0.008110 1.000000 29.800000 rps14 gene rps14 rps14 54697 54999 -1 303 Genome 0.000000 0 0 84 58 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 IGS_060 igs rps14|psaB rps14-psaB 55000 55121 0 122 Genome 0.001821 1 0 300 300 no 0.111111 2 0.500000 0.001821 1.000000 37.700000 psaB gene psaB psaB 55122 57326 -1 2205 Genome 0.000428 3 0 63 300 no 0.222222 4 0.500000 0.000428 1.000000 32.800000 IGS_061 igs psaB|psaA psaB-psaA 57327 57348 0 22 Genome 0.000000 0 0 197 300 no 0.000000 1 0.000000 0.000000 1.000000 33.500000 psaA gene psaA psaA 57349 59601 -1 2253 Genome 0.000592 3 0 219 209 no 0.111111 3 0.333333 0.000592 1.000000 40.900000 IGS_062 igs psaA|ycf3 psaA-ycf3 59602 60199 0 598 Genome 0.004738 10 11 300 237 yes 0.222222 4 0.500000 0.004786 0.998328 50.500000 ycf3 gene ycf3 ycf3 60200 62099 -1 1900 Genome 0.001769 10 13 64 203 no 0.222222 5 0.400000 0.001744 1.000000 35.400000 IGS_063 igs ycf3|trnS-GGA ycf3-trnS-GGA 62100 62635 0 536 Genome 0.002591 5 0 92 1 no 0.111111 3 0.333333 0.002591 1.000000 28.200000 trnS-GGA tRNA trnS-GGA trnS-GGA 62636 62722 1 87 Genome 0.005109 2 0 24 124 no 0.222222 3 0.666667 0.005109 1.000000 29.900000 IGS_064 igs trnS-GGA|rps4 trnS-GGA-rps4 62723 62964 0 242 Genome 0.002066 1 1 63 186 no 0.111111 3 0.333333 0.002073 0.995868 27.400000 rps4 gene rps4 rps4 62965 63591 -1 627 Genome 0.001240 2 0 117 101 no 0.111111 3 0.333333 0.001240 1.000000 35.600000 IGS_065 igs rps4|trnQ-UUG rps4-trnQ-UUG 63592 64142 0 551 Genome 0.008066 16 18 125 109 yes 0.333333 5 0.600000 0.008291 1.000000 49.300000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 64143 64215 1 73 Genome 0.000000 0 0 37 36 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 IGS_066 igs trnQ-UUG|trnF-GAA trnQ-UUG-trnF-GAA 64216 65565 0 1350 Genome 0.004486 16 1 110 166 no 0.222222 4 0.500000 0.004487 1.000000 41.000000 trnF-GAA tRNA trnF-GAA trnF-GAA 65566 65638 1 73 Genome 0.000000 0 0 158 93 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_067 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 65639 66086 0 448 Genome 0.001364 2 1 231 300 no 0.222222 4 0.500000 0.001365 1.000000 42.400000 ndhJ gene ndhJ ndhJ 66087 66563 -1 477 Genome 0.000000 0 0 300 28 no 0.000000 1 0.000000 0.000000 1.000000 24.500000 IGS_068 igs ndhJ|ndhK ndhJ-ndhK 66564 66663 0 100 Genome 0.005000 1 0 300 47 no 0.000000 2 0.000000 0.005000 1.000000 25.800000 ndhK gene ndhK ndhK 66664 67455 -1 792 Genome 0.000281 1 0 71 300 no 0.111111 2 0.500000 0.000281 1.000000 32.700000 ndhC gene ndhC ndhC 67425 67787 -1 363 Genome 0.001530 1 0 300 278 no 0.000000 2 0.000000 0.001530 1.000000 36.100000 IGS_070 igs ndhC|trnM-CAU ndhC-trnM-CAU 67788 69287 0 1500 Genome 0.003815 17 1 10 125 no 0.444444 6 0.666667 0.003817 1.000000 37.300000 trnM-CAU tRNA trnM-CAU trnM-CAU 69288 69360 1 73 Genome 0.000000 0 0 108 52 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_071 igs trnM-CAU|atpB trnM-CAU-atpB 69361 69580 0 220 Genome 0.003535 2 0 181 20 no 0.111111 3 0.333333 0.003535 1.000000 25.100000 atpB gene atpB atpB 69581 71056 1 1476 Genome 0.000866 3 0 68 300 no 0.000000 3 0.000000 0.000866 1.000000 30.700000 IGS_072 igs atpB|atpE atpB-atpE 71057 71065 0 9 Genome 0.000000 0 0 201 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 atpE gene atpE atpE 71066 71473 1 408 Genome 0.000000 0 0 210 58 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_073 igs atpE|rbcL atpE-rbcL 71474 71976 0 503 Genome 0.000442 1 0 300 283 no 0.111111 2 0.500000 0.000442 1.000000 40.500000 rbcL gene rbcL rbcL 71977 73404 1 1428 Genome 0.001323 7 0 300 300 no 0.111111 3 0.333333 0.001323 1.000000 43.300000 IGS_074 igs rbcL|trnK-UUU rbcL-trnK-UUU 73405 74024 0 620 Genome 0.001613 3 0 300 92 no 0.222222 4 0.500000 0.001613 1.000000 37.400000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 74025 74061 1 37 Genome 0.000000 0 0 39 55 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 matK gene matK matK 74754 76262 1 1509 Genome 0.001436 7 5 125 33 no 0.222222 4 0.500000 0.001438 1.000000 33.300000 IGS_077 igs matK|trnK-UUU matK-trnK-UUU 76263 76456 0 194 Genome 0.005727 2 0 151 75 no 0.222222 4 0.500000 0.005727 1.000000 32.400000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 76457 76491 1 35 Genome 0.000000 0 0 26 40 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_078 igs trnK-UUU|trnH-GUG trnK-UUU-trnH-GUG 76492 76929 0 438 Genome 0.003805 6 0 61 277 no 0.222222 4 0.500000 0.003805 1.000000 33.800000 trnH-GUG tRNA trnH-GUG trnH-GUG 76930 77004 -1 75 Genome 0.000000 0 0 102 202 no 0.000000 1 0.000000 0.000000 1.000000 26.400000 IGS_079 igs trnH-GUG|psbA trnH-GUG-psbA 77005 77291 0 287 Genome 0.020906 12 0 177 300 yes 0.000000 2 0.000000 0.020906 1.000000 46.700000 psbA gene psbA psbA 77292 78353 -1 1062 Genome 0.000000 0 0 63 62 no 0.000000 1 0.000000 0.000000 1.000000 29.600000 IGS_080 igs psbA|chlL psbA-chlL 78354 79137 0 784 Genome 0.001913 6 4 300 300 no 0.222222 4 0.500000 0.001920 1.000000 46.600000 chlL gene chlL chlL 79138 80001 1 864 Genome 0.000257 1 0 26 300 no 0.111111 2 0.500000 0.000257 1.000000 29.300000 IGS_081 igs chlL|chlN chlL-chlN 80002 80023 0 22 Genome 0.000000 0 0 222 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 chlN gene chlN chlN 80024 81406 1 1383 Genome 0.000803 5 0 244 62 no 0.111111 2 0.500000 0.000803 1.000000 32.500000 IGS_082 igs chlN|ycf1 chlN-ycf1 81407 82513 0 1107 Genome 0.014227 36 224 64 48 yes 0.666667 7 0.857143 0.012141 0.985547 55.800000 ycf1 gene ycf1 ycf1 82514 90805 1 8292 Genome 0.008075 172 480 66 300 yes 0.555556 7 0.714286 0.007325 0.984805 45.900000 IGS_083 igs ycf1|rps15 ycf1-rps15 90806 91119 0 314 Genome 0.000000 0 0 114 155 no 0.000000 1 0.000000 0.000000 1.000000 27.600000 rps15 gene rps15 rps15 91120 91380 1 261 Genome 0.002129 1 0 300 74 no 0.000000 2 0.000000 0.002129 1.000000 25.700000 IGS_084 igs rps15|ndhH rps15-ndhH 91381 91468 0 88 Genome 0.002525 1 0 105 300 no 0.111111 2 0.500000 0.002525 1.000000 31.300000 ndhH gene ndhH ndhH 91469 92644 1 1176 Genome 0.000378 2 0 13 14 no 0.111111 2 0.500000 0.000378 1.000000 28.400000 IGS_085 igs ndhH|ndhA ndhH-ndhA 92645 92645 0 1 Genome 0.000000 0 0 300 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 ndhA gene ndhA ndhA 92646 94480 1 1835 Genome 0.001150 8 0 300 300 no 0.222222 4 0.500000 0.001150 1.000000 44.500000 IGS_086 igs ndhA|ndhI ndhA-ndhI 94481 94595 0 115 Genome 0.000000 0 0 270 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhI gene ndhI ndhI 94596 95081 1 486 Genome 0.002286 3 0 300 25 no 0.111111 4 0.250000 0.002286 1.000000 28.400000 IGS_087 igs ndhI|ndhG ndhI-ndhG 95082 95185 0 104 Genome 0.009081 3 0 33 300 no 0.111111 3 0.333333 0.009081 1.000000 31.000000 ndhG gene ndhG ndhG 95186 95728 1 543 Genome 0.000000 0 0 22 79 no 0.000000 1 0.000000 0.000000 1.000000 25.500000 IGS_088 igs ndhG|ndhE ndhG-ndhE 95729 95896 0 168 Genome 0.005622 3 0 300 14 no 0.111111 3 0.333333 0.005622 1.000000 26.600000 ndhE gene ndhE ndhE 95897 96199 1 303 Genome 0.002567 2 0 67 49 no 0.111111 3 0.333333 0.002567 1.000000 26.600000 IGS_089 igs ndhE|psaC ndhE-psaC 96200 96588 0 389 Genome 0.008426 11 0 144 300 no 0.222222 5 0.400000 0.008426 1.000000 42.900000 psaC gene psaC psaC 96589 96834 1 246 Genome 0.000000 0 0 243 168 no 0.000000 1 0.000000 0.000000 1.000000 31.400000 IGS_090 igs psaC|ndhD psaC-ndhD 96835 96970 0 136 Genome 0.000000 0 0 300 32 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 ndhD gene ndhD ndhD 96971 98470 1 1500 Genome 0.000481 2 0 300 8 no 0.111111 3 0.333333 0.000481 1.000000 28.100000 IGS_091 igs ndhD|ccsA ndhD-ccsA 98471 98727 0 257 Genome 0.004107 4 4 300 77 no 0.111111 3 0.333333 0.004152 1.000000 32.300000 ccsA gene ccsA ccsA 98728 99684 -1 957 Genome 0.000581 1 0 158 21 no 0.000000 2 0.000000 0.000581 1.000000 27.000000 IGS_092 igs ccsA|trnL-UAG ccsA-trnL-UAG 99685 99819 0 135 Genome 0.001646 1 0 300 300 no 0.111111 2 0.500000 0.001646 1.000000 37.500000 trnL-UAG tRNA trnL-UAG trnL-UAG 99820 99899 -1 80 Genome 0.000000 0 0 113 300 no 0.000000 1 0.000000 0.000000 1.000000 27.200000 IGS_093 igs trnL-UAG|trnP-GGG trnL-UAG-trnP-GGG 99900 100033 0 134 Genome 0.000000 0 0 193 215 no 0.000000 1 0.000000 0.000000 1.000000 33.200000 trnP-GGG tRNA trnP-GGG trnP-GGG 100034 100107 1 74 Genome 0.000000 0 0 300 141 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 IGS_094 igs trnP-GGG|ndhF trnP-GGG-ndhF 100108 102123 0 2016 Genome 0.003307 18 13 300 66 no 0.444444 6 0.666667 0.003316 0.999504 40.600000 ndhF gene ndhF ndhF 102124 104361 1 2238 Genome 0.002184 13 0 110 135 no 0.222222 4 0.500000 0.002184 1.000000 37.600000 IGS_095 igs ndhF|trnN-GUU ndhF-trnN-GUU 104362 105228 0 867 Genome 0.004293 10 0 229 126 no 0.444444 6 0.666667 0.004293 1.000000 46.200000 trnN-GUU tRNA trnN-GUU trnN-GUU 105229 105300 1 72 Genome 0.000000 0 0 32 54 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_096 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 105301 105930 0 630 Genome 0.002557 5 6 104 277 no 0.222222 5 0.400000 0.002567 1.000000 40.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 105931 106004 -1 74 Genome 0.000000 0 0 196 203 no 0.000000 1 0.000000 0.000000 1.000000 33.500000 IGS_097 igs trnR-ACG|rrn5 trnR-ACG-rrn5 106005 106114 0 110 Genome 0.000000 0 0 270 93 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 rrn5 rRNA rrn5 rrn5 106115 106235 -1 121 Genome 0.009183 2 0 300 10 no 0.111111 3 0.333333 0.009183 1.000000 27.800000 IGS_098 igs rrn5|rrn4.5 rrn5-rrn4.5 106236 106598 0 363 Genome 0.003367 4 0 11 173 no 0.222222 4 0.500000 0.003367 1.000000 27.900000 rrn4.5 rRNA rrn4.5 rrn4.5 106599 106700 -1 102 Genome 0.000000 0 0 277 71 no 0.000000 1 0.000000 0.000000 1.000000 24.100000 IGS_099 igs rrn4.5|rrn23 rrn4.5-rrn23 106701 106859 0 159 Genome 0.004542 2 0 300 116 no 0.111111 3 0.333333 0.004542 1.000000 33.100000 rrn23 rRNA rrn23 rrn23 106860 109588 -1 2729 Genome 0.000998 8 9 21 194 no 0.222222 4 0.500000 0.001001 0.996702 29.300000 IGS_100 igs rrn23|trnA-UGC rrn23-trnA-UGC 109589 109870 0 282 Genome 0.003546 3 0 243 31 no 0.111111 3 0.333333 0.003546 1.000000 26.100000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 109871 109905 -1 35 Genome 0.006349 1 0 11 210 no 0.111111 2 0.500000 0.006349 1.000000 28.100000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 110682 110720 -1 39 Genome 0.000000 0 0 176 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_103 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 110721 110789 0 69 Genome 0.011272 2 0 215 34 no 0.111111 3 0.333333 0.011272 1.000000 32.100000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 110790 110824 -1 35 Genome 0.006349 1 0 48 37 no 0.111111 2 0.500000 0.006349 1.000000 30.000000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 111774 111810 -1 37 Genome 0.000000 0 0 14 37 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_106 igs trnI-GAU|rrn16 trnI-GAU-rrn16 111811 113217 0 1407 Genome 0.027226 90 332 51 92 yes 0.777778 8 0.875000 0.024809 0.901208 66.000000 rrn16 rRNA rrn16 rrn16 113218 114730 -1 1513 Genome 0.000477 2 0 71 86 no 0.111111 3 0.333333 0.000477 1.000000 32.800000 IGS_107 igs rrn16|rps12 rrn16-rps12 114731 116296 0 1566 Genome 0.005836 26 1 300 300 yes 0.444444 6 0.666667 0.005837 1.000000 53.000000 rps12_part2 gene rps12 rps12 116297 117104 1 808 Genome 0.000550 2 0 121 2 no 0.222222 3 0.666667 0.000550 1.000000 29.900000 IGS_108 igs rps12|rps7 rps12-rps7 117105 117157 0 53 Genome 0.013627 2 0 300 170 no 0.111111 3 0.333333 0.013627 1.000000 44.400000 rps7 gene rps7 rps7 117158 117637 1 480 Genome 0.000463 1 0 29 105 no 0.111111 2 0.500000 0.000463 1.000000 27.200000 IGS_109 igs rps7|ndhB rps7-ndhB 117638 117868 0 231 Genome 0.005772 6 0 300 238 no 0.222222 3 0.666667 0.005772 1.000000 43.800000 ndhB gene ndhB ndhB 117869 120069 1 2201 Genome 0.000404 4 6 101 177 no 0.333333 4 0.750000 0.000404 1.000000 38.100000 IGS_110 igs ndhB|trnL-CAA ndhB-trnL-CAA 120070 120619 0 550 Genome 0.002222 4 0 51 165 no 0.222222 4 0.500000 0.002222 1.000000 33.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 120620 120700 1 81 Genome 0.000000 0 0 16 84 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_111 igs trnL-CAA|ycf2 trnL-CAA-ycf2 120701 121115 0 415 Genome 0.002945 4 0 97 103 no 0.222222 4 0.500000 0.002945 1.000000 35.100000 ycf2 gene ycf2 ycf2 121116 128309 -1 7194 Genome 0.002754 52 114 43 136 yes 0.666667 7 0.857143 0.002301 1.000000 38.500000 IGS_112 igs ycf2|trnI-CAU ycf2-trnI-CAU 128310 129013 0 704 Genome 0.003709 7 1 21 212 no 0.222222 5 0.400000 0.003711 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 129014 129086 1 73 Genome 0.000000 0 0 117 139 no 0.000000 1 0.000000 0.000000 1.000000 27.500000 IGS_113 igs trnI-CAU|rpl23 trnI-CAU-rpl23 129087 129337 0 251 Genome 0.003099 2 0 190 12 no 0.000000 3 0.000000 0.003099 1.000000 22.000000 rpl23 gene rpl23 rpl23 129338 129625 1 288 Genome 0.001929 1 9 80 300 no 0.111111 3 0.333333 0.001979 1.000000 31.600000 IGS_114 igs rpl23|rpl2 rpl23-rpl2 129626 129653 0 28 Genome 0.000000 0 0 275 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl2 gene rpl2 rpl2 129654 131205 1 1552 Genome 0.002814 12 8 300 61 no 0.444444 6 0.666667 0.002354 0.996778 40.600000 IGS_115 igs rpl2|rps19 rpl2-rps19 131206 131286 0 81 Genome 0.005487 2 5 69 233 no 0.333333 5 0.600000 0.005829 0.950617 40.200000 rps19 gene rps19 rps19 131287 131673 1 387 Genome 0.001436 1 0 7 23 no 0.000000 2 0.000000 0.001436 1.000000 22.100000 IGS_116 igs rps19|rpl22 rps19-rpl22 131674 131711 0 38 Genome 0.024854 3 0 153 47 no 0.111111 3 0.333333 0.024854 1.000000 45.400000 rpl22 gene rpl22 rpl22 131712 132188 1 477 Genome 0.002096 3 0 5 120 no 0.111111 3 0.333333 0.002096 1.000000 26.600000 IGS_117 igs rpl22|rps3 rpl22-rps3 132189 132201 0 13 Genome 0.000000 0 0 180 107 no 0.000000 1 0.000000 NA 1.000000 26.800000 rps3 gene rps3 rps3 132202 132906 1 705 Genome 0.002916 5 0 193 285 no 0.222222 4 0.500000 0.002916 1.000000 45.800000 IGS_118 igs rps3|rpl16 rps3-rpl16 132907 132999 0 93 Genome 0.000000 0 0 187 192 no 0.000000 1 0.000000 0.000000 1.000000 32.800000 rpl16 gene rpl16 rpl16 133000 134317 1 1318 Genome 0.002487 6 4 280 300 no 0.222222 4 0.500000 0.002495 0.996965 46.100000 IGS_119 igs rpl16|rpl14 rpl16-rpl14 134318 134370 0 53 Genome 0.000000 0 0 210 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl14 gene rpl14 rpl14 134371 134739 1 369 Genome 0.001506 1 0 263 1 no 0.000000 2 0.000000 0.001506 1.000000 21.300000 IGS_120 igs rpl14|rps8 rpl14-rps8 134740 134865 0 126 Genome 0.007055 2 4 36 69 no 0.111111 4 0.250000 0.007091 1.000000 32.600000 rps8 gene rps8 rps8 134866 135264 1 399 Genome 0.004456 5 0 89 58 no 0.222222 4 0.500000 0.004456 1.000000 32.900000 IGS_121 igs rps8|infA rps8-infA 135265 135469 0 205 Genome 0.001084 1 0 93 87 no 0.111111 2 0.500000 0.001084 1.000000 28.500000 infA gene infA infA 135470 135733 1 264 Genome 0.003788 3 3 146 40 no 0.333333 5 0.600000 0.003796 1.000000 32.500000 IGS_122 igs infA|rpl36 infA-rpl36 135734 135836 0 103 Genome 0.002157 1 0 17 140 no 0.111111 2 0.500000 0.002157 1.000000 24.300000 rpl36 gene rpl36 rpl36 135837 135950 1 114 Genome 0.000000 0 0 62 26 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_123 igs rpl36|rps11 rpl36-rps11 135951 344 0 589 Genome 0.039839 49 236 176 178 no 0.666667 7 0.857143 0.031397 0.984720 81.100000