primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 CAAAACCCGTAGCCTTACCA TTTGGCGAAGAAAAAGCGAC 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.301972 6907 7246 444-459 1.000000 79.9 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 AAAACCCGTAGCCTTACCAC TTTGGCGAAGAAAAAGCGAC 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.303504 6907 7246 443-458 1.000000 79.9 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 ACCAAAACCCGTAGCCTTAC TTTGGCGAAGAAAAAGCGAC 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.303504 6907 7246 446-461 1.000000 79.9 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 GAAGGATTCGAACCTCCGAG TTTGGCGAAGAAAAAGCGAC 20 20 55.0 45.0 57.8 57.9 16.4 0.0 0.325263 6907 7246 473-488 1.000000 79.6 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 CAAAACCCGTAGCCTTACCA GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 57.8 57.8 0.0 15.8 0.350381 6907 7246 450-465 1.000000 79.5 trnG-UCC_p1 trnG-UCC 1 TAGCAGTGGAATGAATGGGC TGAGCAAGCAGAAACCCTTT 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.128915 9025 9846 1531-1541 1.000000 81.5 trnG-UCC_p2 trnG-UCC 2 GCAAAGGAAAGGGGTAGCTT TGAGCAAGCAGAAACCCTTT 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.147046 9025 9846 1513-1523 1.000000 81.4 trnG-UCC_p3 trnG-UCC 3 TAGCAGTGGAATGAATGGGC TGCTCAAACAACCCCAATCA 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.136307 9025 9846 1721-1731 1.000000 81.1 trnG-UCC_p4 trnG-UCC 4 TAGCAGTGGAATGAATGGGC GCCGGCAAATCAAAATTGGA 20 20 50.0 45.0 57.9 57.9 0.0 24.8 0.148990 9025 9846 1842-1852 1.000000 80.9 trnG-UCC_p5 trnG-UCC 5 TAGCAGTGGAATGAATGGGC ACAAGTAGCCGGCAAATCAA 20 20 50.0 45.0 57.9 58.1 0.0 31.5 0.152851 9025 9846 1849-1859 1.000000 80.8 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 9847 9984 209-218 1.000000 75.0 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 9847 9984 212-221 1.000000 74.6 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 9847 9984 215-224 1.000000 74.0 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 9847 9984 218-227 1.000000 73.6 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 9847 9984 213-222 1.000000 72.3 atpF-atpH_p1 atpF-atpH 1 TTAAACCCGAAACTCCCAGC CCCGAAGCAGAGGGTAAAAT 20 20 50.0 50.0 58.1 57.6 0.0 2.6 0.519813 13021 13451 619-622 1.000000 76.6 atpF-atpH_p2 atpF-atpH 2 TTAAACCCGAAACTCCCAGC ATTTATGGGTTGGTCGTGGC 20 20 50.0 50.0 58.1 58.5 0.0 0.0 0.629704 13021 13451 553-556 1.000000 75.8 atpF-atpH_p3 atpF-atpH 3 GGCCAGTGACCAAAGGAAAT CCCGAAGCAGAGGGTAAAAT 20 20 50.0 50.0 58.4 57.6 0.0 2.6 0.787470 13021 13451 595-598 1.000000 74.5 atpF-atpH_p4 atpF-atpH 4 TTAAACCCGAAACTCCCAGC ACGATTTATGGGTTGGTCGT 20 20 50.0 45.0 58.1 57.2 0.0 0.0 0.873747 13021 13451 556-559 1.000000 73.9 atpF-atpH_p5 atpF-atpH 5 GGCCAGTGACCAAAGGAAAT ATTTATGGGTTGGTCGTGGC 20 20 50.0 50.0 58.4 58.5 0.0 0.0 0.897361 13021 13451 529-532 1.000000 73.7 rps2-rpoC2_p1 rps2-rpoC2 1 GCTTCCATCATCTCTGCCAA TGGTTCTTGCATCCCAAACA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.127614 15819 16049 319-324 1.000000 82.2 rps2-rpoC2_p2 rps2-rpoC2 2 TTGCAGAGATGTAAGGTGCC TGGTTCTTGCATCCCAAACA 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.193030 15819 16049 384-389 1.000000 81.1 rps2-rpoC2_p3 rps2-rpoC2 3 GCAGAGATGTAAGGTGCCAT TGGTTCTTGCATCCCAAACA 20 20 50.0 45.0 57.7 57.9 0.0 0.0 0.417746 15819 16049 382-387 1.000000 79.4 rps2-rpoC2_p4 rps2-rpoC2 4 CCTGCTTCCATCATCTCTGC TGGTTCTTGCATCCCAAACA 20 20 55.0 45.0 58.4 57.9 0.0 0.0 0.483703 15819 16049 322-327 1.000000 79.3 rps2-rpoC2_p5 rps2-rpoC2 5 CTGCTTCCATCATCTCTGCC TGGTTCTTGCATCCCAAACA 20 20 55.0 45.0 58.4 57.9 0.0 0.0 0.483703 15819 16049 321-326 1.000000 79.3 trnM-CAU-atpE_p1 trnM-CAU-atpE 1 TGGTTCAAATCCAATAGTAGGT GAGTGGAGGCTGTCAATGTT 22 20 36.4 50.0 54.8 57.8 0.0 0.0 5.414263 49129 49312 238-239 1.000000 47.7 trnM-CAU-atpE_p2 trnM-CAU-atpE 2 TGGTTCAAATCCAATAGTAGGT TAGACGAGCTAGGACACGAG 22 20 36.4 55.0 54.8 58.1 0.0 0.0 5.285857 49129 49312 255-256 1.000000 47.2 trnM-CAU-atpE_p3 trnM-CAU-atpE 3 TGGTTCAAATCCAATAGTAGGT GCTGAAGGCAAGAGACAAGT 22 20 36.4 50.0 54.8 58.1 0.0 0.0 5.333590 49129 49312 296-297 1.000000 46.2 trnM-CAU-atpE_p4 trnM-CAU-atpE 4 TGGTTCAAATCCAATAGTAGGT GAGCTGAAGGCAAGAGACAA 22 20 36.4 50.0 54.8 57.8 0.0 0.0 5.399013 49129 49312 298-299 1.000000 46.2 trnM-CAU-atpE_p5 trnM-CAU-atpE 5 TGGTTCAAATCCAATAGTAGGT AGCTGAAGGCAAGAGACAAG 22 20 36.4 50.0 54.8 57.8 0.0 0.0 5.405089 49129 49312 297-298 1.000000 46.2 atpE_p1 atpE 1 GGTACCTAAATCGGCACCTG CTGCTCCTGCTACGACATTT 20 20 55.0 50.0 58.1 58.0 4.1 0.0 0.066270 49313 49717 1513-1515 1.000000 81.2 atpE_p2 atpE 2 TAAATCGGCACCTGAATCGG CTGCTCCTGCTACGACATTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.067632 49313 49717 1507-1509 1.000000 81.2 atpE_p3 atpE 3 GGTACCTAAATCGGCACCTG GCAGTTTATGTACCTGCGGA 20 20 55.0 50.0 58.1 58.0 4.1 5.5 0.069077 49313 49717 1547-1549 1.000000 81.1 atpE_p4 atpE 4 GGTACCTAAATCGGCACCTG TTGGTTTGACTGCCCTAACC 20 20 55.0 50.0 58.1 58.0 4.1 0.0 0.060828 49313 49717 1777-1779 1.000000 81.0 atpE_p5 atpE 5 TAAATCGGCACCTGAATCGG TTGGTTTGACTGCCCTAACC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.062189 49313 49717 1771-1773 1.000000 80.9 rbcL-accD_p1 rbcL-accD 1 ATCAAATTCGAATTCGCCGC ATTGAGCCAACGTTTTCCCA 20 20 45.0 45.0 57.9 58.3 22.9 0.0 0.406817 53289 53969 688-738 1.000000 82.7 rbcL-accD_p2 rbcL-accD 2 ATCAAATTCGAATTCGCCGC TTGAGCCAACGTTTTCCCAT 20 20 45.0 45.0 57.9 58.3 22.9 0.0 0.406817 53289 53969 687-737 1.000000 82.7 rbcL-accD_p3 rbcL-accD 3 GCTGCTTGTGAGGTATGGAA ATTGAGCCAACGTTTTCCCA 20 20 50.0 45.0 57.9 58.3 0.0 0.0 0.415354 53289 53969 712-762 1.000000 82.5 rbcL-accD_p4 rbcL-accD 4 GCTGCTTGTGAGGTATGGAA TTGAGCCAACGTTTTCCCAT 20 20 50.0 45.0 57.9 58.3 0.0 0.0 0.415354 53289 53969 711-761 1.000000 82.5 rbcL-accD_p5 rbcL-accD 5 ATCAAATTCGAATTCGCCGC ATTTACTTAGCCCACACCCG 20 20 45.0 50.0 57.9 57.6 22.9 0.0 0.518632 53289 53969 737-787 1.000000 81.6 petA-psbJ_p1 petA-psbJ 1 ACGTGTCCAAGGTTTGTTGT ATTATAGGCACTGCAACGGG 20 20 45.0 50.0 58.2 58.0 0.0 2.8 0.203702 59754 60741 1190-1190 1.000000 80.7 petA-psbJ_p2 petA-psbJ 2 ACGTGTCCAAGGTTTGTTGT TATAGGCACTGCAACGGGTA 20 20 45.0 50.0 58.2 58.5 0.0 2.8 0.683721 59754 60741 1188-1188 1.000000 76.8 petA-psbJ_p3 petA-psbJ 3 ACGTGTCCAAGGTTTGTTGT TGCAACGGGTATTCTTGTGA 20 20 45.0 45.0 58.2 57.4 0.0 0.0 0.723620 59754 60741 1179-1179 1.000000 76.5 petA-psbJ_p4 petA-psbJ 4 ACGTGTCCAAGGTTTGTTGT ACTGCAACGGGTATTCTTGT 20 20 45.0 45.0 58.2 57.4 0.0 0.0 0.732499 59754 60741 1181-1181 1.000000 76.4 petA-psbJ_p5 petA-psbJ 5 CGTGTCCAAGGTTTGTTGTT ATTATAGGCACTGCAACGGG 20 20 45.0 50.0 57.1 58.0 0.0 2.8 0.964193 59754 60741 1189-1189 1.000000 74.6 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA AAGCAGCCAGTAGAAAACCG 20 20 50.0 50.0 57.9 58.5 6.4 0.0 0.527577 61516 62789 1421-1425 1.000000 77.2 psbE-petL_p2 psbE-petL 2 CAACCCGCAATGAATAGGGA GCAGCCAGTAGAAAACCGAA 20 20 50.0 50.0 57.9 58.5 6.4 0.0 0.531926 61516 62789 1419-1423 1.000000 77.2 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT AAGCAGCCAGTAGAAAACCG 20 20 45.0 50.0 58.2 58.5 0.0 0.0 0.647263 61516 62789 1430-1434 1.000000 76.2 psbE-petL_p4 psbE-petL 4 ACGAATAACCAACCCGCAAT GCAGCCAGTAGAAAACCGAA 20 20 45.0 50.0 58.2 58.5 0.0 0.0 0.651612 61516 62789 1428-1432 1.000000 76.2 psbE-petL_p5 psbE-petL 5 TGCTGACGAATAACCAACCC AAGCAGCCAGTAGAAAACCG 20 20 50.0 50.0 58.2 58.5 0.0 0.0 0.660168 61516 62789 1435-1439 1.000000 76.1 psbT-psbN_p1 psbT-psbN 1 TTTTCGAGAACCGCCTAAGG TCGCCATCTCCATATCTGGT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.104406 70986 71043 214-214 1.000000 80.3 psbT-psbN_p2 psbT-psbN 2 TTTTCGAGAACCGCCTAAGG GGGTACGCCTTATATACCGC 20 20 50.0 55.0 57.9 57.7 0.0 0.0 0.373212 70986 71043 176-176 1.000000 78.4 psbT-psbN_p3 psbT-psbN 3 TTTTCGAGAACCGCCTAAGG GATCCATTCGAGGAACACGG 20 20 50.0 55.0 57.9 58.4 0.0 0.0 0.517031 70986 71043 128-128 1.000000 77.7 psbT-psbN_p4 psbT-psbN 4 TTTTCGAGAACCGCCTAAGG GTCGCCATCTCCATATCTGG 20 20 50.0 55.0 57.9 57.6 0.0 0.0 0.465757 70986 71043 215-215 1.000000 77.4 psbT-psbN_p5 psbT-psbN 5 TTTTCGAGAACCGCCTAAGG GGCAACCCTCTCAACAACTA 20 20 50.0 50.0 57.9 57.4 0.0 0.0 0.650428 70986 71043 151-151 1.000000 76.4 trnI-CAU-ycf2_p1 trnI-CAU-ycf2 1 GTTGGGCGCTTTAACCATTC CACCCAATCAAATTTGGCCC 20 20 50.0 50.0 58.0 57.9 7.6 17.9 0.121581 83121 83200 208-208 1.000000 81.0 trnI-CAU-ycf2_p2 trnI-CAU-ycf2 2 GTTGGGCGCTTTAACCATTC CCACCCAATCAAATTTGGCC 20 20 50.0 50.0 58.0 57.9 7.6 17.9 0.121581 83121 83200 209-209 1.000000 80.9 trnI-CAU-ycf2_p3 trnI-CAU-ycf2 3 TCATTGGTGTGCATCCAACA CACCCAATCAAATTTGGCCC 20 20 45.0 50.0 58.0 57.9 22.4 17.9 0.119842 83121 83200 259-259 1.000000 80.6 trnI-CAU-ycf2_p4 trnI-CAU-ycf2 4 TCATTGGTGTGCATCCAACA CCACCCAATCAAATTTGGCC 20 20 45.0 50.0 58.0 57.9 22.4 17.9 0.119842 83121 83200 260-260 1.000000 80.6 trnI-CAU-ycf2_p5 trnI-CAU-ycf2 5 TCATTGGTGTGCATCCAACA CCCACCCAATCAAATTTGGC 20 20 45.0 50.0 58.0 57.9 22.4 17.9 0.119842 83121 83200 261-261 1.000000 80.6 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 CCATTTCTACCGGGCATTCA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 57.9 58.0 6.3 0.0 0.059165 90358 91349 1079-1086 1.000000 84.6 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AAAGGGATATCAAGCCGCTG AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.0 58.0 4.8 0.0 0.034958 90358 91349 1123-1130 1.000000 84.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AAAGGGATATCAAGCCGCTG CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.0 58.0 4.8 0.0 0.036329 90358 91349 1124-1131 1.000000 84.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 CCATTTCTACCGGGCATTCA CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 57.9 58.0 6.3 0.0 0.060535 90358 91349 1080-1087 1.000000 84.5 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AAAGGGATATCAAGCCGCTG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 4.8 0.0 0.151405 90358 91349 1133-1140 1.000000 83.6 ccsA-psaC_p1 ccsA-psaC 1 GGGTGTGGATTCGGCAATTA GAATCTGCTTGTCCAACCGA 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.433907 92480 94198 1913-1915 1.000000 77.5 ccsA-psaC_p2 ccsA-psaC 2 GGGTGTGGATTCGGCAATTA CCAAGAACCGAAGACTGTGT 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.482811 92480 94198 1949-1951 1.000000 77.1 ccsA-psaC_p3 ccsA-psaC 3 GGGTGTGGATTCGGCAATTA TCTGCTTGTCCAACCGATTT 20 20 50.0 45.0 58.2 57.7 0.0 0.0 0.512670 92480 94198 1910-1912 1.000000 76.9 ccsA-psaC_p4 ccsA-psaC 4 GGGTGTGGATTCGGCAATTA TGAATCTGCTTGTCCAACCG 20 20 50.0 50.0 58.2 58.5 0.0 0.0 0.719649 92480 94198 1914-1916 1.000000 75.2 ccsA-psaC_p5 ccsA-psaC 5 GGGTGTGGATTCGGCAATTA ATCTGCTTGTCCAACCGATT 20 20 50.0 45.0 58.2 57.5 0.0 0.0 0.739216 92480 94198 1911-1913 1.000000 75.1 psaC-rps15_p1 psaC-rps15 1 ATACATCTGTGGGACAGGCT TGAGTTAGGTATTCGAGAACCA 20 22 50.0 40.9 58.1 56.3 4.0 17.6 3.800437 94445 95708 1369-1374 1.000000 51.4 psaC-rps15_p2 psaC-rps15 2 ACATCCGTCCCAAGGTATCA TGAGTTAGGTATTCGAGAACCA 20 22 50.0 40.9 58.1 56.3 0.0 17.6 3.811356 94445 95708 1395-1400 1.000000 51.3 psaC-rps15_p3 psaC-rps15 3 GACAGGCTCGTACACATTGA TGAGTTAGGTATTCGAGAACCA 20 22 50.0 40.9 57.6 56.3 0.0 17.6 4.049273 94445 95708 1357-1362 1.000000 49.4 psaC-rps15_p4 psaC-rps15 4 ACAGGCTCGTACACATTGAG TGAGTTAGGTATTCGAGAACCA 20 22 50.0 40.9 57.6 56.3 0.0 17.6 4.055767 94445 95708 1356-1361 1.000000 49.4 psaC-rps15_p5 psaC-rps15 5 CAGGCTCGTACACATTGAGT TGAGTTAGGTATTCGAGAACCA 20 22 50.0 40.9 57.6 56.3 0.0 17.6 4.055767 94445 95708 1355-1360 1.000000 49.4 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 GCTGTTAACTGACTGGTCGT CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 57.8 57.8 15.9 18.9 0.366304 102148 102666 624-628 1.000000 82.6 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 TGGTCGTAGGTTCGAATCCT CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 58.2 57.8 18.9 18.9 0.372539 102148 102666 611-615 1.000000 82.6 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 CTGGTCGTAGGTTCGAATCC CAGAGGATTAGAGCACGTGG 20 20 55.0 55.0 57.8 57.8 4.4 18.9 0.421214 102148 102666 612-616 1.000000 82.2 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 TTCCTCAGTAGCTCAGTGGT CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 57.7 57.8 0.0 18.9 0.526686 102148 102666 654-658 1.000000 81.2 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 GGTTCGAATCCTACTTGGGG CAGAGGATTAGAGCACGTGG 20 20 55.0 55.0 57.7 57.8 0.0 18.9 0.543107 102148 102666 603-607 1.000000 81.2 trnA-UGC-trnI-GAU_p1 trnA-UGC-trnI-GAU 1 TACCGCCTGCACAATTAGAC TGATTTACTTCACGGGCGAG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023125 107372 107435 197-197 1.000000 80.6 trnA-UGC-trnI-GAU_p2 trnA-UGC-trnI-GAU 2 TACCGCCTGCACAATTAGAC ATTGGTTGGATCGTAGGTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.056929 107372 107435 219-219 1.000000 80.3 trnA-UGC-trnI-GAU_p3 trnA-UGC-trnI-GAU 3 TACCGCCTGCACAATTAGAC AGGTCTCTGGTTCAAGTCCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.121695 107372 107435 179-179 1.000000 79.9 trnA-UGC-trnI-GAU_p4 trnA-UGC-trnI-GAU 4 CAACGACCCAATTGCAAGAG TGATTTACTTCACGGGCGAG 20 20 50.0 50.0 57.7 58.0 4.9 0.0 0.341137 107372 107435 161-161 1.000000 78.3 trnA-UGC-trnI-GAU_p5 trnA-UGC-trnI-GAU 5 TACCGCCTGCACAATTAGAC CGAGGTCTCTGGTTCAAGTC 20 20 50.0 55.0 58.0 57.6 0.0 0.0 0.374259 107372 107435 181-181 1.000000 77.9