primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 206 567 431-431 1.000000 78.6 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.208010 206 567 445-445 1.000000 78.5 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 206 567 444-444 1.000000 78.5 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 206 567 446-446 1.000000 78.5 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG CCGTGCTAACCTTGGTATGG 20 20 55.0 55.0 58.1 58.3 0.0 0.0 0.465225 206 567 480-480 1.000000 76.4 matK-trnK-UUU_p1 matK-trnK-UUU 1 ACTATGGTCATGGGCAAGTG AACGGTAGAGTACTCGGCTT 20 20 50.0 50.0 57.6 58.2 0.0 17.1 0.593563 3696 4383 820-820 1.000000 75.3 matK-trnK-UUU_p2 matK-trnK-UUU 2 ACTATGGTCATGGGCAAGTG ACGGTAGAGTACTCGGCTTT 20 20 50.0 50.0 57.6 58.2 0.0 17.1 0.593563 3696 4383 819-819 1.000000 75.3 matK-trnK-UUU_p3 matK-trnK-UUU 3 GGTCATGGGCAAGTGCATAA AACGGTAGAGTACTCGGCTT 20 20 50.0 50.0 58.5 58.2 5.5 17.1 0.695162 3696 4383 815-815 1.000000 74.5 matK-trnK-UUU_p4 matK-trnK-UUU 4 GGTCATGGGCAAGTGCATAA ACGGTAGAGTACTCGGCTTT 20 20 50.0 50.0 58.5 58.2 5.5 17.1 0.695162 3696 4383 814-814 1.000000 74.5 matK-trnK-UUU_p5 matK-trnK-UUU 5 ACTATGGTCATGGGCAAGTG GGGTTGCTAACTCAACGGTA 20 20 50.0 50.0 57.6 57.5 0.0 0.0 0.885900 3696 4383 833-833 1.000000 73.0 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 GTCGTGGTCTTCCAAACCTT GGGTGGGGGTTTTTAAGGAA 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.439010 4421 5194 940-940 1.000000 76.6 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 GTCGTGGTCTTCCAAACCTT AAGGGTGGGGGTTTTTAAGG 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.445892 4421 5194 942-942 1.000000 76.5 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCGATGGTATGGACGAATCC GGGTGGGGGTTTTTAAGGAA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.482468 4421 5194 919-919 1.000000 76.2 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 GTCGTGGTCTTCCAAACCTT AGGGTGGGGGTTTTTAAGGA 20 20 50.0 50.0 58.0 58.5 0.0 0.0 0.488560 4421 5194 941-941 1.000000 76.2 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CCGATGGTATGGACGAATCC AAGGGTGGGGGTTTTTAAGG 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.489350 4421 5194 921-921 1.000000 76.2 atpA-atpF_p1 atpA-atpF 1 ATGCCATCGCCTACTTGAAG TTGGCAGGTTAGGGTCAATG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.255334 11941 12015 229-239 1.000000 78.3 atpA-atpF_p2 atpA-atpF 2 ATGCCATCGCCTACTTGAAG TACGTGGAGCCTTAGGAACT 20 20 50.0 50.0 58.0 57.8 0.0 0.7 0.267921 11941 12015 301-311 1.000000 78.1 atpA-atpF_p3 atpA-atpF 3 ATCGCCTACTTGAAGTACGC TTGGCAGGTTAGGGTCAATG 20 20 50.0 50.0 57.8 57.8 13.9 0.0 0.419683 11941 12015 224-234 1.000000 77.0 atpA-atpF_p4 atpA-atpF 4 ATCGCCTACTTGAAGTACGC TACGTGGAGCCTTAGGAACT 20 20 50.0 50.0 57.8 57.8 13.9 0.7 0.432269 11941 12015 296-306 1.000000 76.8 atpA-atpF_p5 atpA-atpF 5 CAATGCCATCGCCTACTTGA TTGGCAGGTTAGGGTCAATG 20 20 50.0 50.0 58.3 57.8 0.0 0.0 0.547140 11941 12015 231-241 1.000000 76.0 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GTCCTTTGTTAATCGGGGCT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.321560 57223 58543 1455-1466 1.000000 78.1 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGGGCTAAAACTCCGGAAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.9 57.8 5.2 0.0 0.336606 57223 58543 1441-1452 1.000000 78.0 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GTCCTTTGTTAATCGGGGCT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 57.9 57.5 0.0 0.0 0.665332 57223 58543 1454-1465 1.000000 75.4 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGGGCTAAAACTCCGGAAAT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 57.9 57.5 5.2 0.0 0.680379 57223 58543 1440-1451 1.000000 75.3 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGGTCCTTTGTTAATCGGGG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.5 57.8 0.0 0.0 0.697675 57223 58543 1457-1468 1.000000 75.1 rbcL-accD_p1 rbcL-accD 1 ACTACAGTTCGGTGGAGGAA CATAAACCACCGTTTTCGCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.033579 63756 64487 991-991 1.000000 79.9 rbcL-accD_p2 rbcL-accD 2 TGCAATGCACGCAGTTATTG CATAAACCACCGTTTTCGCC 20 20 45.0 50.0 58.0 58.0 2.7 0.0 0.048312 63756 64487 1303-1303 1.000000 79.7 rbcL-accD_p3 rbcL-accD 3 GAAACCGGCGAAATCAAAGG CATAAACCACCGTTTTCGCC 20 20 50.0 50.0 58.0 58.0 9.3 0.0 0.051020 63756 64487 1497-1497 1.000000 79.7 rbcL-accD_p4 rbcL-accD 4 ACTACAGTTCGGTGGAGGAA ACCATCGTTATCTTGCGCAT 20 20 50.0 45.0 58.0 58.0 0.0 12.8 0.051811 63756 64487 1444-1444 1.000000 79.7 rbcL-accD_p5 rbcL-accD 5 TGCAATGCACGCAGTTATTG ACCATCGTTATCTTGCGCAT 20 20 45.0 45.0 58.0 58.0 2.7 12.8 0.066544 63756 64487 1756-1756 1.000000 79.6 accD_p1 accD 1 ATGCGCAAGATAACGATGGT CATACATAGTACGCCGGGTG 20 20 45.0 55.0 58.0 57.9 17.1 2.2 0.106767 66347 66466 2452-2668 1.000000 83.9 accD_p2 accD 2 TCGAATGATATCGATGCACAAGA CGAGCTTGGATCTTTTGTCG 23 20 39.1 50.0 58.1 57.2 8.5 0.0 3.924758 66347 66466 104-866 1.000000 54.3 accD_p3 accD 3 CGAATGATATCGATGCACAAGA CGAGCTTGGATCTTTTGTCG 22 20 40.9 50.0 56.8 57.2 8.5 0.0 4.032244 66347 66466 103-865 1.000000 53.4 accD_p4 accD 4 TCGAATGATATCGATGCACA CGAGCTTGGATCTTTTGTCG 20 20 40.0 50.0 54.8 57.2 8.5 0.0 4.021010 66347 66466 776-866 1.000000 52.8 accD_p5 accD 5 TCGAATGATATCGATGCACAAG CGAGCTTGGATCTTTTGTCG 22 20 40.9 50.0 56.8 57.2 8.5 0.0 4.032244 66347 66466 776-866 1.000000 52.7 ycf4-cemA_p1 ycf4-cemA 1 TTGGCCTATTTCTTGCGTGT GAGAGAGAAAGCCACCAAGG 20 20 45.0 55.0 58.1 57.9 3.3 0.0 0.202190 70222 70932 815-815 1.000000 78.6 ycf4-cemA_p2 ycf4-cemA 2 AAAAAGCTGCTGAATTGGCC GAGAGAGAAAGCCACCAAGG 20 20 45.0 55.0 57.8 57.9 1.4 0.0 0.280841 70222 70932 829-829 1.000000 77.9 ycf4-cemA_p3 ycf4-cemA 3 AAAGCTGCTGAATTGGCCTA GAGAGAGAAAGCCACCAAGG 20 20 45.0 55.0 57.8 57.9 1.4 0.0 0.327130 70222 70932 827-827 1.000000 77.6 ycf4-cemA_p4 ycf4-cemA 4 TTGGCCTATTTCTTGCGTGT AGAGAGAAAGCCACCAAGGA 20 20 45.0 50.0 58.1 58.3 3.3 0.0 0.361058 70222 70932 814-814 1.000000 77.3 ycf4-cemA_p5 ycf4-cemA 5 TTGGCCTATTTCTTGCGTGT CCGGCATTCCACGAATTAGT 20 20 45.0 50.0 58.1 58.3 3.3 0.0 0.432019 70222 70932 863-863 1.000000 76.7 petA-psbJ_p1 petA-psbJ 1 ATCCATTACGTGTCCAAGGC ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.458445 72788 73389 747-747 1.000000 76.4 petA-psbJ_p2 petA-psbJ 2 ATTACGTGTCCAAGGCCTTG ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 58.2 57.6 34.6 0.0 0.598842 72788 73389 743-743 1.000000 75.3 petA-psbJ_p3 petA-psbJ 3 CATTACGTGTCCAAGGCCTT ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 58.2 57.6 13.8 0.0 0.598842 72788 73389 744-744 1.000000 75.3 petA-psbJ_p4 petA-psbJ 4 CGTGTCCAAGGCCTTGTATT ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 58.2 57.6 37.1 0.0 0.598842 72788 73389 739-739 1.000000 75.3 petA-psbJ_p5 petA-psbJ 5 TACGTGTCCAAGGCCTTGTA ATTCTGGATTGGGTTCGTCC 20 20 50.0 50.0 58.7 57.6 37.1 0.0 1.079971 72788 73389 741-741 1.000000 71.5 rpl20-rps12_p1 rpl20-rps12 1 GTAAGTCTTGAATGGGCCCC CTCAACGTCGAGGAACATGT 20 20 55.0 50.0 58.2 57.9 22.3 12.9 0.302025 78529 79462 1050-1061 1.000000 78.4 rpl20-rps12_p2 rpl20-rps12 2 CCCCTCGAAAGCTTAATGCA CTCAACGTCGAGGAACATGT 20 20 50.0 50.0 58.2 57.9 0.0 12.9 0.315800 78529 79462 1034-1045 1.000000 78.3 rpl20-rps12_p3 rpl20-rps12 3 TAAGTCTTGAATGGGCCCCT CTCAACGTCGAGGAACATGT 20 20 50.0 50.0 58.3 57.9 22.3 12.9 0.384764 78529 79462 1049-1060 1.000000 77.8 rpl20-rps12_p4 rpl20-rps12 4 GTAAGTCTTGAATGGGCCCC ACAGCCAATCAGAAATCGCA 20 20 55.0 45.0 58.2 58.2 22.3 0.0 0.410942 78529 79462 1097-1108 1.000000 77.5 rpl20-rps12_p5 rpl20-rps12 5 GTAAGTCTTGAATGGGCCCC CAGCCAATCAGAAATCGCAC 20 20 55.0 50.0 58.2 57.8 22.3 0.0 0.420417 78529 79462 1096-1107 1.000000 77.4 petB_p1 petB 1 TCATTTAGAGCCCGGGTTTC TCCTTCCCCAAGTGATAAATGA 20 22 50.0 40.9 57.6 56.8 24.6 0.0 3.630786 84743 86177 1572-1572 1.000000 51.1 petB_p2 petB 2 GGGAGTTCAATCGCGGAATT TCCTTCCCCAAGTGATAAATGA 20 22 50.0 40.9 58.6 56.8 6.1 0.0 3.837950 84743 86177 1531-1531 1.000000 49.4 petB_p3 petB 3 GGGTTTCGAGCCCATTCTAT TCCTTCCCCAAGTGATAAATGA 20 22 50.0 40.9 57.4 56.8 18.8 0.0 3.857793 84743 86177 1559-1559 1.000000 49.2 petB_p4 petB 4 TCATTTAGAGCCCGGGTTTC TTCCTTCCCCAAGTGATAAATGA 20 23 50.0 39.1 57.6 57.5 24.6 0.0 3.941910 84743 86177 1573-1573 1.000000 48.6 petB_p5 petB 5 ATTTTGGGAGTTCAATCGCG TCCTTCCCCAAGTGATAAATGA 20 22 45.0 40.9 57.1 56.8 0.0 0.0 4.137143 84743 86177 1536-1536 1.000000 47.0 rps7-rps12_p1 rps7-rps12 1 TTTTTCCTTCTGCAGCACCT CCCTAGATGCTGTCGGAGTA 20 20 45.0 55.0 57.9 58.0 9.5 0.0 0.089117 107406 108026 703-708 1.000000 79.9 rps7-rps12_p2 rps7-rps12 2 TTTTTCCTTCTGCAGCACCT AGGATTTACCCGGTGTGAGA 20 20 45.0 50.0 57.9 58.1 9.5 0.0 0.124793 107406 108026 742-747 1.000000 79.5 rps7-rps12_p3 rps7-rps12 3 GTTTTTCCTTCTGCAGCACC CCCTAGATGCTGTCGGAGTA 20 20 50.0 55.0 57.9 58.0 9.5 0.0 0.157404 107406 108026 704-709 1.000000 79.3 rps7-rps12_p4 rps7-rps12 4 TTTTTCCTTCTGCAGCACCT GAGGGGGAAGGGTTAAGGAT 20 20 45.0 55.0 57.9 58.1 9.5 0.0 0.163135 107406 108026 757-762 1.000000 79.2 rps7-rps12_p5 rps7-rps12 5 GTTTTTCCTTCTGCAGCACC AGGATTTACCCGGTGTGAGA 20 20 50.0 50.0 57.9 58.1 9.5 0.0 0.193080 107406 108026 743-748 1.000000 79.0 trnN-GUU-ycf1_p1 trnN-GUU-ycf1 1 AGGATTCGAACCTACCACCA ATCCACAAAAGAGTCCGAGC 20 20 50.0 50.0 58.1 57.9 15.0 0.0 0.153620 118393 119268 884-1018 1.000000 82.8 trnN-GUU-ycf1_p2 trnN-GUU-ycf1 2 AGGATTCGAACCTACCACCA CTAGGGAGAGTGTGCTCAGA 20 20 50.0 55.0 58.1 57.9 15.0 0.0 0.189314 118393 119268 905-1039 1.000000 82.5 trnN-GUU-ycf1_p3 trnN-GUU-ycf1 3 AGGATTCGAACCTACCACCA TCCGAGCAAAACGACTGAAT 20 20 50.0 45.0 58.1 57.8 15.0 0.0 0.216833 118393 119268 871-1005 1.000000 82.3 trnN-GUU-ycf1_p4 trnN-GUU-ycf1 4 AGGATTCGAACCTACCACCA AAAGAGTCCGAGCAAAACGA 20 20 50.0 45.0 58.1 57.8 15.0 0.0 0.287315 118393 119268 877-1011 1.000000 81.7 trnN-GUU-ycf1_p5 trnN-GUU-ycf1 5 AGGATTCGAACCTACCACCA AGGGAGAGTGTGCTCAGAAA 20 20 50.0 50.0 58.1 58.3 15.0 0.0 0.330982 118393 119268 903-1037 1.000000 81.4 ndhF-rpl32_p1 ndhF-rpl32 1 AGGAAGGGAAAGTGGGATGA AGCTTTTAATGCTGCCCGAT 20 20 50.0 45.0 57.9 58.2 0.0 4.5 0.291998 123454 124289 964-986 1.000000 79.6 ndhF-rpl32_p2 ndhF-rpl32 2 GGTATGAGCCACCCGTATTG AGCTTTTAATGCTGCCCGAT 20 20 55.0 45.0 58.1 58.2 0.0 4.5 0.353288 123454 124289 942-964 1.000000 79.1 ndhF-rpl32_p3 ndhF-rpl32 3 AGGAAGGGAAAGTGGGATGA TAATGCTGCCCGATATCCCT 20 20 50.0 50.0 57.9 58.3 0.0 0.0 0.403169 123454 124289 958-980 1.000000 78.7 ndhF-rpl32_p4 ndhF-rpl32 4 AGGAAGGGAAAGTGGGATGA AAAGCTTTTAATGCTGCCCG 20 20 50.0 45.0 57.9 57.6 0.0 5.7 0.428411 123454 124289 966-988 1.000000 78.5 ndhF-rpl32_p5 ndhF-rpl32 5 GGTATGAGCCACCCGTATTG TAATGCTGCCCGATATCCCT 20 20 55.0 50.0 58.1 58.3 0.0 0.0 0.464460 123454 124289 936-958 1.000000 78.2 ccsA_p1 ccsA 1 AGTAGCGGCATGTCATCTTC ATGGTTCGTGCCCATTCAC 20 19 50.0 52.6 57.8 58.4 1.4 0.0 1.664391 125554 126513 1139-1144 1.000000 66.7 ccsA_p2 ccsA 2 GAGTAGCGGCATGTCATCTT ATGGTTCGTGCCCATTCAC 20 19 50.0 52.6 57.8 58.4 1.4 0.0 1.664391 125554 126513 1140-1145 1.000000 66.7 ccsA_p3 ccsA 3 GTAGCGGCATGTCATCTTCT ATGGTTCGTGCCCATTCAC 20 19 50.0 52.6 57.8 58.4 1.4 0.0 1.664391 125554 126513 1138-1143 1.000000 66.7 ccsA_p4 ccsA 4 AGTAGCGGCATGTCATCTTC CATGGTTCGTGCCCATTCA 20 19 50.0 52.6 57.8 58.4 1.4 0.0 1.665568 125554 126513 1140-1145 1.000000 66.7 ccsA_p5 ccsA 5 GTAGCGGCATGTCATCTTCT CATGGTTCGTGCCCATTCA 20 19 50.0 52.6 57.8 58.4 1.4 0.0 1.665568 125554 126513 1139-1144 1.000000 66.7 ccsA-ndhD_p1 ccsA-ndhD 1 TTCGGCAATTGTAGCGTGTA ACCCGGATTTCGTTCTTTCA 20 20 45.0 45.0 57.9 57.4 7.4 0.7 0.636096 126514 126753 426-426 1.000000 76.0 ccsA-ndhD_p2 ccsA-ndhD 2 TTCGGCAATTGTAGCGTGTA TCGGTTGACAAGGTTGAAGT 20 20 45.0 45.0 57.9 57.3 7.4 0.0 0.784317 126514 126753 403-403 1.000000 74.9 ccsA-ndhD_p3 ccsA-ndhD 3 TCGGCAATTGTAGCGTGTAT ACCCGGATTTCGTTCTTTCA 20 20 45.0 45.0 57.7 57.4 7.4 0.7 0.857533 126514 126753 425-425 1.000000 74.3 ccsA-ndhD_p4 ccsA-ndhD 4 TTCGGCAATTGTAGCGTGTA CCCGGATTTCGTTCTTTCAC 20 20 45.0 50.0 57.9 57.1 7.4 0.7 0.976032 126514 126753 425-425 1.000000 73.3 ccsA-ndhD_p5 ccsA-ndhD 5 TTCGGCAATTGTAGCGTGTA TGGTATGTACCCGGATTTCG 20 20 45.0 50.0 57.9 57.1 7.4 0.7 0.976489 126514 126753 434-434 1.000000 73.3 ycf1_p1 ycf1 1 AGTCCAATAGCGGGTCTTTC GGAATCGGAATTGGAATCGGA 20 21 50.0 47.6 57.3 58.2 0.0 0.0 1.847074 139140 139259 308-308 1.000000 69.7 ycf1_p2 ycf1 2 GTCCAATAGCGGGTCTTTCT GGAATCGGAATTGGAATCGGA 20 21 50.0 47.6 57.3 58.2 0.0 0.0 1.847074 139140 139259 307-307 1.000000 69.7 ycf1_p3 ycf1 3 AGTCCAATAGCGGGTCTTTC GGAATCGGAATTGGAATCGG 20 20 50.0 50.0 57.3 56.6 0.0 0.0 2.044454 139140 139259 308-308 1.000000 68.2 ycf1_p4 ycf1 4 GTCCAATAGCGGGTCTTTCT GGAATCGGAATTGGAATCGG 20 20 50.0 50.0 57.3 56.6 0.0 0.0 2.044454 139140 139259 307-307 1.000000 68.2 ycf1_p5 ycf1 5 GTCCAATAGCGGGTCTTTCT CGGAATTGGAATCGGAATTGG 20 21 50.0 47.6 57.3 57.6 0.0 0.0 2.047356 139140 139259 302-302 1.000000 68.2