feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH(gtg) tRNA trnH(gtg) trnH(gtg) 17 91 1 75 LSC 0.000000 0 0 300 39 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_001 igs trnH(gtg)|psbA trnH(gtg)-psbA 92 419 0 328 LSC 0.033195 8 87 300 300 yes 1.000000 2 1.000000 NA 0.734756 69.900000 psbA gene psbA psbA 420 1481 -1 1062 LSC 0.000000 0 0 164 195 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1482 1762 0 281 LSC 0.037037 10 11 300 151 yes 1.000000 2 1.000000 NA 0.960854 73.700000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1763 1797 -1 35 LSC 0.000000 0 0 28 116 no 0.000000 1 0.000000 NA 1.000000 20.900000 matK gene matK matK 2145 3662 -1 1518 LSC 0.000659 1 0 230 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3663 4387 0 725 LSC 0.000000 0 4 300 17 no 1.000000 2 1.000000 NA 0.994483 45.600000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4388 4424 -1 37 LSC 0.027027 1 0 300 138 no 1.000000 2 1.000000 NA 1.000000 63.400000 IGS_006 igs trnK-UUU|rbcL trnK-UUU-rbcL 4425 5475 0 1051 LSC 0.050881 52 29 19 300 yes 1.000000 2 1.000000 NA 0.972407 76.500000 rbcL gene rbcL rbcL 5476 6924 -1 1449 LSC 0.000000 0 0 100 300 no 0.000000 1 0.000000 NA 1.000000 32.500000 IGS_007 igs rbcL|atpB rbcL-atpB 6925 7748 0 824 LSC 0.001233 1 13 300 300 no 1.000000 2 1.000000 NA 0.984223 61.000000 atpB gene atpB atpB 7749 9245 1 1497 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 atpE gene atpE atpE 9233 9643 1 411 LSC 0.000000 0 0 300 38 no 0.000000 1 0.000000 NA 1.000000 23.900000 IGS_009 igs atpE|trnM(cat) atpE-trnM(cat) 9644 9784 0 141 LSC 0.007092 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.600000 trnM(cat) tRNA trnM(cat) trnM(cat) 9785 9857 -1 73 LSC 0.000000 0 0 102 300 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_010 igs trnM(cat)|trnV-UAC trnM(cat)-trnV-UAC 9858 10045 0 188 LSC 0.000000 0 0 175 300 no 0.000000 1 0.000000 NA 1.000000 31.900000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 10046 10084 1 39 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 10680 10714 1 35 LSC 0.028571 1 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 68.900000 IGS_013 igs trnV-UAC|ndhC trnV-UAC-ndhC 10715 10937 0 223 LSC 0.000000 0 0 14 257 no 0.000000 1 0.000000 NA 1.000000 19.800000 ndhC gene ndhC ndhC 10938 11300 1 363 LSC 0.005510 2 0 237 300 no 1.000000 2 1.000000 NA 1.000000 57.000000 ndhK gene ndhK ndhK 11201 11971 1 771 LSC 0.003891 3 0 5 99 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_015 igs ndhK|ndhJ ndhK-ndhJ 11972 12161 0 190 LSC 0.034188 4 73 1 300 no 1.000000 2 1.000000 NA 0.615789 51.000000 ndhJ gene ndhJ ndhJ 12162 12638 1 477 LSC 0.000000 0 0 72 300 no 0.000000 1 0.000000 NA 1.000000 27.800000 IGS_016 igs ndhJ|trnF(gaa) ndhJ-trnF(gaa) 12639 13406 0 768 LSC 0.002915 2 82 300 300 no 1.000000 2 1.000000 NA 0.893229 63.600000 trnF(gaa) tRNA trnF(gaa) trnF(gaa) 13407 13480 -1 74 LSC 0.000000 0 0 129 300 no 0.000000 1 0.000000 NA 1.000000 28.400000 IGS_017 igs trnF(gaa)|trnL-UAA trnF(gaa)-trnL-UAA 13481 13908 0 428 LSC 0.000000 0 0 203 51 no 0.000000 1 0.000000 NA 1.000000 25.200000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 13909 13958 -1 50 LSC 0.000000 0 0 300 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 14315 14319 -1 5 LSC 0.000000 0 0 300 186 no 0.000000 1 0.000000 NA 1.000000 32.700000 IGS_020 igs trnL-UAA|trnT(tgt) trnL-UAA-trnT(tgt) 14320 15435 0 1116 LSC 0.072930 59 307 300 182 yes 1.000000 2 1.000000 NA 0.724910 85.000000 trnT(tgt) tRNA trnT(tgt) trnT(tgt) 15436 15510 1 75 LSC 0.000000 0 0 238 107 no 0.000000 1 0.000000 NA 1.000000 26.800000 IGS_021 igs trnT(tgt)|rps4 trnT(tgt)-rps4 15511 15821 0 311 LSC 0.010791 3 33 300 300 no 1.000000 2 1.000000 NA 0.893891 62.100000 rps4 gene rps4 rps4 15822 16427 1 606 LSC 0.001650 1 0 159 300 no 1.000000 2 1.000000 NA 1.000000 56.600000 IGS_022 igs rps4|trnS(gga) rps4-trnS(gga) 16428 16671 0 244 LSC 0.000000 0 0 174 300 no 0.000000 1 0.000000 NA 1.000000 31.800000 trnS(gga) tRNA trnS(gga) trnS(gga) 16672 16759 -1 88 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_023 igs trnS(gga)|ycf3 trnS(gga)-ycf3 16760 17022 0 263 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf3 gene ycf3 ycf3 17023 19013 1 1991 LSC 0.000000 0 5 300 26 no 1.000000 2 1.000000 NA 0.997489 44.900000 IGS_024 igs ycf3|psaA ycf3-psaA 19014 19828 0 815 LSC 0.013559 8 225 300 300 no 1.000000 2 1.000000 NA 0.723926 64.600000 psaA gene psaA psaA 19829 22081 1 2253 LSC 0.000444 1 0 130 300 no 1.000000 2 1.000000 NA 1.000000 52.200000 IGS_025 igs psaA|psaB psaA-psaB 22082 22106 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaB gene psaB psaB 22107 24311 1 2205 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.500000 IGS_026 igs psaB|rps14 psaB-rps14 24312 24418 0 107 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps14 gene rps14 rps14 24419 24721 1 303 LSC 0.000000 0 0 300 44 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_027 igs rps14|trnM(cat) rps14-trnM(cat) 24722 24883 0 162 LSC 0.006173 1 0 300 127 no 1.000000 2 1.000000 NA 1.000000 50.600000 trnM(cat) tRNA trnM(cat) trnM(cat) 24884 24959 1 76 LSC 0.000000 0 0 117 51 no 0.000000 1 0.000000 NA 1.000000 22.600000 IGS_028 igs trnM(cat)|trnG(gcc) trnM(cat)-trnG(gcc) 24960 25047 0 88 LSC 0.011364 1 0 193 172 no 1.000000 2 1.000000 NA 1.000000 56.900000 trnG(gcc) tRNA trnG(gcc) trnG(gcc) 25048 25116 -1 69 LSC 0.000000 0 0 36 103 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_029 igs trnG(gcc)|psbZ trnG(gcc)-psbZ 25117 25861 0 745 LSC 0.067797 32 273 105 300 yes 1.000000 2 1.000000 NA 0.633557 75.400000 psbZ gene psbZ psbZ 25862 26050 -1 189 LSC 0.000000 0 0 149 125 no 0.000000 1 0.000000 NA 1.000000 28.100000 IGS_030 igs psbZ|trnS(tga) psbZ-trnS(tga) 26051 26409 0 359 LSC 0.005571 2 0 300 166 no 1.000000 2 1.000000 NA 1.000000 54.400000 trnS(tga) tRNA trnS(tga) trnS(tga) 26410 26502 1 93 LSC 0.000000 0 0 50 73 no 0.000000 1 0.000000 NA 1.000000 22.500000 IGS_031 igs trnS(tga)|psbC trnS(tga)-psbC 26503 26705 0 203 LSC 0.025000 5 3 143 300 no 1.000000 2 1.000000 NA 0.985222 64.000000 psbC gene psbC psbC 26706 28157 -1 1452 LSC 0.000689 1 0 84 300 no 1.000000 2 1.000000 NA 1.000000 50.400000 psbD gene psbD psbD 28075 29136 -1 1062 LSC 0.000000 0 0 300 292 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_033 igs psbD|trnT(ggt) psbD-trnT(ggt) 29137 30296 0 1160 LSC 0.023744 26 65 300 300 yes 1.000000 2 1.000000 NA 0.943966 76.900000 trnT(ggt) tRNA trnT(ggt) trnT(ggt) 30297 30370 -1 74 LSC 0.000000 0 0 136 300 no 0.000000 1 0.000000 NA 1.000000 28.900000 IGS_034 igs trnT(ggt)|trnE(ttc) trnT(ggt)-trnE(ttc) 30371 31130 0 760 LSC 0.015789 12 0 210 300 yes 1.000000 2 1.000000 NA 1.000000 67.800000 trnE(ttc) tRNA trnE(ttc) trnE(ttc) 31131 31205 1 75 LSC 0.000000 0 0 87 300 no 0.000000 1 0.000000 NA 1.000000 25.300000 IGS_035 igs trnE(ttc)|trnY(gta) trnE(ttc)-trnY(gta) 31206 31269 0 64 LSC 0.000000 0 0 162 300 no 0.000000 1 0.000000 NA 1.000000 30.900000 trnY(gta) tRNA trnY(gta) trnY(gta) 31270 31355 1 86 LSC 0.000000 0 0 226 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_036 igs trnY(gta)|trnD(gtc) trnY(gta)-trnD(gtc) 31356 31780 0 425 LSC 0.000000 0 3 300 118 no 1.000000 2 1.000000 NA 0.992941 49.600000 trnD(gtc) tRNA trnD(gtc) trnD(gtc) 31781 31856 1 76 LSC 0.000000 0 0 300 42 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_037 igs trnD(gtc)|psbM trnD(gtc)-psbM 31857 32285 0 429 LSC 0.007059 3 4 300 300 no 1.000000 2 1.000000 NA 0.990676 60.100000 psbM gene psbM psbM 32286 32390 1 105 LSC 0.000000 0 0 38 300 no 0.000000 1 0.000000 NA 1.000000 21.600000 IGS_038 igs psbM|trnC(gca) psbM-trnC(gca) 32391 34108 0 1718 LSC 0.008192 14 9 143 300 no 1.000000 2 1.000000 NA 0.994761 59.200000 trnC(gca) tRNA trnC(gca) trnC(gca) 34109 34179 -1 71 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_039 igs trnC(gca)|rpoB trnC(gca)-rpoB 34180 35045 0 866 LSC 0.001163 1 6 300 300 no 1.000000 2 1.000000 NA 0.993072 60.100000 rpoB gene rpoB rpoB 35046 38258 1 3213 LSC 0.000000 0 0 135 300 no 0.000000 1 0.000000 NA 1.000000 31.700000 rpoC1 gene rpoC1 rpoC1 38258 41154 1 2897 LSC 0.000692 2 8 300 285 no 1.000000 2 1.000000 NA 0.997239 56.500000 IGS_041 igs rpoC1|rpoC2 rpoC1-rpoC2 41155 41353 0 199 LSC 0.000000 0 0 300 86 no 0.000000 1 0.000000 NA 1.000000 25.200000 rpoC2 gene rpoC2 rpoC2 41354 45511 1 4158 LSC 0.001443 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_042 igs rpoC2|rps2 rpoC2-rps2 45512 45764 0 253 LSC 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.996047 52.900000 rps2 gene rps2 rps2 45765 46475 1 711 LSC 0.000000 0 0 300 104 no 0.000000 1 0.000000 NA 1.000000 32.800000 IGS_043 igs rps2|atpI rps2-atpI 46476 46724 0 249 LSC 0.004016 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.800000 atpI gene atpI atpI 46725 47468 1 744 LSC 0.000000 0 0 144 137 no 0.000000 1 0.000000 NA 1.000000 35.300000 IGS_044 igs atpI|atpH atpI-atpH 47469 48387 0 919 LSC 0.013158 12 7 300 300 no 1.000000 2 1.000000 NA 0.992383 67.000000 atpH gene atpH atpH 48388 48633 1 246 LSC 0.000000 0 0 285 203 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_045 igs atpH|atpF atpH-atpF 48634 49026 0 393 LSC 0.007692 3 3 300 300 no 1.000000 2 1.000000 NA 0.992366 59.600000 atpF gene atpF atpF 49027 50322 1 1296 LSC 0.000773 1 2 171 300 no 1.000000 2 1.000000 NA 0.998457 57.200000 IGS_046 igs atpF|atpA atpF-atpA 50323 50412 0 90 LSC 0.000000 0 6 39 300 no 1.000000 2 1.000000 NA 0.933333 44.800000 atpA gene atpA atpA 50413 51945 1 1533 LSC 0.000000 0 0 129 89 no 0.000000 1 0.000000 NA 1.000000 31.600000 IGS_047 igs atpA|trnR(tct) atpA-trnR(tct) 51946 52177 0 232 LSC 0.094170 21 9 300 162 yes 1.000000 2 1.000000 NA 0.961207 87.200000 trnR(tct) tRNA trnR(tct) trnR(tct) 52178 52249 -1 72 LSC 0.000000 0 0 56 90 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_048 igs trnR(tct)|trnG-UCC trnR(tct)-trnG-UCC 52250 52522 0 273 LSC 0.003676 1 1 128 300 no 1.000000 2 1.000000 NA 0.996337 49.600000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 52523 52572 -1 50 LSC 0.000000 0 0 182 300 no 0.000000 1 0.000000 NA 1.000000 32.400000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 53256 53278 -1 23 LSC 0.000000 0 0 300 175 no 0.000000 1 0.000000 NA 1.000000 31.900000 IGS_051 igs trnG-UCC|trnS(gct) trnG-UCC-trnS(gct) 53279 53917 0 639 LSC 0.008130 4 147 300 208 no 1.000000 2 1.000000 NA 0.769953 63.000000 trnS(gct) tRNA trnS(gct) trnS(gct) 53918 54004 1 87 LSC 0.000000 0 0 178 121 no 0.000000 1 0.000000 NA 1.000000 27.800000 IGS_052 igs trnS(gct)|psbI trnS(gct)-psbI 54005 54165 0 161 LSC 0.006289 1 2 265 226 no 1.000000 2 1.000000 NA 0.987578 57.300000 psbI gene psbI psbI 54166 54276 -1 111 LSC 0.000000 0 0 39 115 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_053 igs psbI|psbK psbI-psbK 54277 54770 0 494 LSC 0.008333 4 14 150 300 no 1.000000 2 1.000000 NA 0.971660 60.300000 psbK gene psbK psbK 54771 54956 -1 186 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_054 igs psbK|trnQ(ttg) psbK-trnQ(ttg) 54957 55399 0 443 LSC 0.000000 0 9 300 204 no 1.000000 2 1.000000 NA 0.979684 57.400000 trnQ(ttg) tRNA trnQ(ttg) trnQ(ttg) 55400 55471 1 72 LSC 0.000000 0 0 300 132 no 0.000000 1 0.000000 NA 1.000000 28.600000 IGS_055 igs trnQ(ttg)|rps16 trnQ(ttg)-rps16 55472 55962 0 491 LSC 0.002037 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.700000 rps16 gene rps16 rps16 55963 57113 1 1151 LSC 0.002634 3 12 300 300 no 1.000000 2 1.000000 NA 0.989574 61.300000 IGS_056 igs rps16|accD rps16-accD 57114 57594 0 481 LSC 0.000000 0 2 300 29 no 1.000000 2 1.000000 NA 0.995842 43.800000 accD gene accD accD 57595 58947 1 1353 LSC 0.014970 20 17 300 20 no 1.000000 2 1.000000 NA 0.987435 55.100000 IGS_057 igs accD|psaI accD-psaI 58948 59359 0 412 LSC 0.098655 22 189 300 114 yes 1.000000 2 1.000000 NA 0.541262 71.800000 psaI gene psaI psaI 59360 59464 1 105 LSC 0.000000 0 0 106 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_058 igs psaI|ycf4 psaI-ycf4 59465 59635 0 171 LSC 0.208333 15 99 211 300 yes 1.000000 2 1.000000 NA 0.421053 78.700000 ycf4 gene ycf4 ycf4 59636 60223 1 588 LSC 0.000000 0 0 17 102 no 0.000000 1 0.000000 NA 1.000000 26.000000 IGS_059 igs ycf4|cemA ycf4-cemA 60224 60713 0 490 LSC 0.002053 1 3 300 300 no 1.000000 2 1.000000 NA 0.993878 58.200000 cemA gene cemA cemA 60714 61403 1 690 LSC 0.001449 1 0 300 56 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_060 igs cemA|petA cemA-petA 61404 61581 0 178 LSC 0.005618 1 0 81 300 no 1.000000 2 1.000000 NA 1.000000 46.800000 petA gene petA petA 61582 62544 1 963 LSC 0.000000 0 0 121 300 no 0.000000 1 0.000000 NA 1.000000 34.100000 IGS_061 igs petA|psbJ petA-psbJ 62545 63356 0 812 LSC 0.003722 3 6 300 300 no 1.000000 2 1.000000 NA 0.992611 61.600000 psbJ gene psbJ psbJ 63357 63479 -1 123 LSC 0.000000 0 0 104 271 no 0.000000 1 0.000000 NA 1.000000 26.600000 IGS_062 igs psbJ|psbL psbJ-psbL 63480 63635 0 156 LSC 0.000000 0 0 227 115 no 0.000000 1 0.000000 NA 1.000000 27.400000 psbL gene psbL psbL 63636 63767 -1 132 LSC 0.007576 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 IGS_063 igs psbL|psbF psbL-psbF 63768 63774 0 7 LSC 0.000000 0 0 16 300 no 0.000000 1 0.000000 NA 1.000000 20.000000 psbF gene psbF psbF 63775 63894 -1 120 LSC 0.000000 0 0 23 300 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_064 igs psbF|psbE psbF-psbE 63895 63903 0 9 LSC 0.000000 0 0 143 300 no 0.000000 1 0.000000 NA 1.000000 29.500000 psbE gene psbE psbE 63904 64155 -1 252 LSC 0.000000 0 0 152 287 no 0.000000 1 0.000000 NA 1.000000 30.100000 IGS_065 igs psbE|petL psbE-petL 64156 65397 0 1242 LSC 0.025527 23 341 300 300 yes 1.000000 2 1.000000 NA 0.725443 71.100000 petL gene petL petL 65398 65493 1 96 LSC 0.000000 0 0 290 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_066 igs petL|petG petL-petG 65494 65650 0 157 LSC 0.000000 0 0 300 241 no 0.000000 1 0.000000 NA 1.000000 33.800000 petG gene petG petG 65651 65764 1 114 LSC 0.000000 0 0 300 127 no 0.000000 1 0.000000 NA 1.000000 28.300000 IGS_067 igs petG|trnW(cca) petG-trnW(cca) 65765 65915 0 151 LSC 0.006623 1 0 300 128 no 1.000000 2 1.000000 NA 1.000000 50.900000 trnW(cca) tRNA trnW(cca) trnW(cca) 65916 65989 -1 74 LSC 0.000000 0 0 23 54 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_068 igs trnW(cca)|trnP(tgg) trnW(cca)-trnP(tgg) 65990 66181 0 192 LSC 0.041667 8 0 97 130 yes 1.000000 2 1.000000 NA 1.000000 68.700000 trnP(tgg) tRNA trnP(tgg) trnP(tgg) 66182 66255 -1 74 LSC 0.000000 0 0 21 56 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_069 igs trnP(tgg)|psaJ trnP(tgg)-psaJ 66256 66512 0 257 LSC 0.007782 2 0 95 300 no 1.000000 2 1.000000 NA 1.000000 49.100000 psaJ gene psaJ psaJ 66513 66647 1 135 LSC 0.000000 0 0 149 300 no 0.000000 1 0.000000 NA 1.000000 29.900000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 66648 67157 0 510 LSC 0.003922 2 0 284 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 rpl33 gene rpl33 rpl33 67158 67292 1 135 LSC 0.000000 0 0 91 194 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_071 igs rpl33|rps18 rpl33-rps18 67293 67611 0 319 LSC 0.003135 1 0 226 271 no 1.000000 2 1.000000 NA 1.000000 54.700000 rps18 gene rps18 rps18 67612 67923 1 312 LSC 0.006431 2 1 124 0 no 1.000000 2 1.000000 NA 0.996795 41.800000 IGS_072 igs rps18|rpl20 rps18-rpl20 67924 68154 0 231 LSC 0.013158 3 3 1 300 no 1.000000 2 1.000000 NA 0.987013 46.400000 rpl20 gene rpl20 rpl20 68155 68547 -1 393 LSC 0.000000 0 0 4 300 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_073 igs rpl20|clpP rpl20-clpP 68548 69654 0 1107 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 clpP gene clpP clpP 69655 71700 -1 2046 LSC 0.001467 3 1 300 216 no 1.000000 2 1.000000 NA 0.999511 58.500000 IGS_074 igs clpP|psbB clpP-psbB 71701 72128 0 428 LSC 0.002336 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 psbB gene psbB psbB 72129 73670 1 1542 LSC 0.000000 0 0 211 249 no 0.000000 1 0.000000 NA 1.000000 39.900000 IGS_075 igs psbB|psbT psbB-psbT 73671 73839 0 169 LSC 0.000000 0 0 300 80 no 0.000000 1 0.000000 NA 1.000000 24.800000 psbT gene psbT psbT 73840 73941 1 102 LSC 0.009804 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.100000 IGS_076 igs psbT|psbN psbT-psbN 73942 74006 0 65 LSC 0.000000 0 0 21 300 no 0.000000 1 0.000000 NA 1.000000 20.300000 psbN gene psbN psbN 74007 74138 -1 132 LSC 0.000000 0 0 86 300 no 0.000000 1 0.000000 NA 1.000000 25.200000 IGS_077 igs psbN|psbH psbN-psbH 74139 74251 0 113 LSC 0.000000 0 0 218 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbH gene psbH psbH 74252 74473 1 222 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_078 igs psbH|petB psbH-petB 74474 74609 0 136 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 petB gene petB petB 74610 76093 1 1484 LSC 0.002701 4 3 300 136 no 1.000000 2 1.000000 NA 0.997978 55.700000 IGS_079 igs petB|petD petB-petD 76094 76295 0 202 LSC 0.005128 1 7 300 300 no 1.000000 2 1.000000 NA 0.965347 58.800000 petD gene petD petD 76296 77517 1 1222 LSC 0.003284 4 4 65 172 no 1.000000 2 1.000000 NA 0.996727 50.800000 IGS_080 igs petD|rpoA petD-rpoA 77518 77753 0 236 LSC 0.008475 2 0 2 2 no 1.000000 2 1.000000 NA 1.000000 42.500000 rpoA gene rpoA rpoA 77754 78737 -1 984 LSC 0.001016 1 0 61 5 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_081 igs rpoA|rps11 rpoA-rps11 78738 78827 0 90 LSC 0.034483 3 3 300 300 yes 1.000000 2 1.000000 NA 0.966667 75.400000 rps11 gene rps11 rps11 78828 79244 -1 417 LSC 0.000000 0 0 39 96 no 0.000000 1 0.000000 NA 1.000000 24.100000 IGS_082 igs rps11|rpl36 rps11-rpl36 79245 79626 0 382 LSC 0.089552 30 47 300 300 yes 1.000000 2 1.000000 NA 0.876963 89.300000 rpl36 gene rpl36 rpl36 79627 79740 -1 114 LSC 0.000000 0 0 32 300 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_083 igs rpl36|rps8 rpl36-rps8 79741 80187 0 447 LSC 0.000000 0 1 146 300 no 1.000000 2 1.000000 NA 0.997763 51.700000 rps8 gene rps8 rps8 80188 80592 -1 405 LSC 0.000000 0 0 300 69 no 0.000000 1 0.000000 NA 1.000000 26.100000 IGS_084 igs rps8|rpl14 rps8-rpl14 80593 80839 0 247 LSC 0.020243 5 0 300 300 no 1.000000 2 1.000000 NA 1.000000 64.100000 rpl14 gene rpl14 rpl14 80840 81208 -1 369 LSC 0.000000 0 0 156 300 no 0.000000 1 0.000000 NA 1.000000 31.900000 IGS_085 igs rpl14|rpl16 rpl14-rpl16 81209 81331 0 123 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl16 gene rpl16 rpl16 81332 82905 -1 1574 LSC 0.004557 7 38 300 64 no 1.000000 2 1.000000 NA 0.975858 53.300000 IGS_086 igs rpl16|rps3 rpl16-rps3 82906 83043 0 138 LSC 0.007246 1 0 154 300 no 1.000000 2 1.000000 NA 1.000000 53.200000 rps3 gene rps3 rps3 83044 83703 -1 660 LSC 0.001515 1 0 73 35 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_087 igs rps3|rps19 rps3-rps19 83704 84220 0 517 LSC 0.071856 24 183 278 219 yes 1.000000 2 1.000000 NA 0.646035 81.600000 rps19 gene rps19 rps19 84221 84499 -1 279 LSC 0.003584 1 0 21 300 no 1.000000 2 1.000000 NA 1.000000 41.100000 IGS_088 igs rps19|rpl2 rps19-rpl2 84500 84553 0 54 IRb 0.000000 0 0 59 300 no 0.000000 1 0.000000 NA 1.000000 23.200000 rpl2 gene rpl2 rpl2 84554 86063 -1 1510 IRb 0.000000 0 0 113 300 no 0.000000 1 0.000000 NA 1.000000 33.500000 IGS_089 igs rpl2|rpl23 rpl2-rpl23 86064 86081 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 86082 86363 -1 282 IRb 0.000000 0 0 300 119 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_090 igs rpl23|trnM(cat) rpl23-trnM(cat) 86364 86806 0 443 IRb 0.002257 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.800000 trnM(cat) tRNA trnM(cat) trnM(cat) 86807 86881 -1 75 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_091 igs trnM(cat)|ycf2 trnM(cat)-ycf2 86882 86969 0 88 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 86970 93878 1 6909 IRb 0.000145 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_092 igs ycf2|trnL(caa) ycf2-trnL(caa) 93879 94463 0 585 IRb 0.002564 1 195 225 300 no 1.000000 2 1.000000 NA 0.666667 56.700000 trnL(caa) tRNA trnL(caa) trnL(caa) 94464 94546 -1 83 IRb 0.000000 0 0 281 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_093 igs trnL(caa)|ndhB trnL(caa)-ndhB 94547 95138 0 592 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 39.800000 ndhB gene ndhB ndhB 95139 97319 -1 2181 IRb 0.000467 1 39 300 45 no 1.000000 2 1.000000 NA 0.982118 47.700000 IGS_094 igs ndhB|rps7 ndhB-rps7 97320 97675 0 356 IRb 0.005618 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 rps7 gene rps7 rps7 97676 98143 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_095 igs rps7|trnV(gac) rps7-trnV(gac) 98144 100796 0 2653 IRb 0.001133 3 4 300 300 no 1.000000 2 1.000000 NA 0.998492 57.100000 trnV(gac) tRNA trnV(gac) trnV(gac) 100797 100868 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_096 igs trnV(gac)|BKH98_gr008 trnV(gac)-BKH98_gr008 100869 101089 0 221 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 BKH98_gr008 rRNA BKH98_gr008 BKH98_gr008 101090 102580 1 1491 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_097 igs BKH98_gr008|trnI-GAU BKH98_gr008-trnI-GAU 102581 102863 0 283 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 102864 102905 1 42 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 103856 103890 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_100 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 103891 103954 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 103955 103992 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 104803 104837 1 35 IRb 0.000000 0 0 226 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_103 igs trnA-UGC|BKH98_gr007 trnA-UGC-BKH98_gr007 104838 104994 0 157 IRb 0.000000 0 0 261 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 BKH98_gr007 rRNA BKH98_gr007 BKH98_gr007 104995 107807 1 2813 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_104 igs BKH98_gr007|BKH98_gr006 BKH98_gr007-BKH98_gr006 107808 107908 0 101 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 BKH98_gr006 rRNA BKH98_gr006 BKH98_gr006 107909 108012 1 104 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_105 igs BKH98_gr006|BKH98_gr005 BKH98_gr006-BKH98_gr005 108013 108245 0 233 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 BKH98_gr005 rRNA BKH98_gr005 BKH98_gr005 108246 108366 1 121 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_106 igs BKH98_gr005|trnR(acg) BKH98_gr005-trnR(acg) 108367 108615 0 249 IRb 0.000000 0 0 300 221 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnR(acg) tRNA trnR(acg) trnR(acg) 108616 108690 1 75 IRb 0.000000 0 0 300 146 no 0.000000 1 0.000000 NA 1.000000 29.700000 IGS_107 igs trnR(acg)|trnN(gtt) trnR(acg)-trnN(gtt) 108691 109316 0 626 IRb 0.001605 1 3 300 300 no 1.000000 2 1.000000 NA 0.995208 60.100000 trnN(gtt) tRNA trnN(gtt) trnN(gtt) 109317 109390 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_108 igs trnN(gtt)|ycf1 trnN(gtt)-ycf1 109391 109745 0 355 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.900000 ycf1 gene ycf1 ycf1 109746 115100 1 5355 SSC 0.020779 111 13 300 41 yes 1.000000 2 1.000000 NA 0.997572 52.800000 IGS_109 igs ycf1|rps15 ycf1-rps15 115101 115500 0 400 SSC 0.026178 10 18 12 210 no 1.000000 2 1.000000 NA 0.955000 59.700000 rps15 gene rps15 rps15 115501 115773 1 273 SSC 0.003663 1 0 253 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_110 igs rps15|ndhH rps15-ndhH 115774 115870 0 97 SSC 0.000000 0 0 62 300 no 0.000000 1 0.000000 NA 1.000000 23.400000 ndhH gene ndhH ndhH 115871 117052 1 1182 SSC 0.000000 0 0 159 300 no 0.000000 1 0.000000 NA 1.000000 36.900000 IGS_111 igs ndhH|ndhA ndhH-ndhA 117053 117053 0 1 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhA gene ndhA ndhA 117054 119350 1 2297 SSC 0.003054 7 5 300 300 no 1.000000 2 1.000000 NA 0.997823 59.100000 IGS_112 igs ndhA|ndhI ndhA-ndhI 119351 119403 0 53 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhI gene ndhI ndhI 119404 119910 1 507 SSC 0.000000 0 0 300 167 no 0.000000 1 0.000000 NA 1.000000 35.600000 IGS_113 igs ndhI|ndhG ndhI-ndhG 119911 120215 0 305 SSC 0.003344 1 6 300 197 no 1.000000 2 1.000000 NA 0.980328 56.200000 ndhG gene ndhG ndhG 120216 120746 1 531 SSC 0.001883 1 0 137 300 no 1.000000 2 1.000000 NA 1.000000 53.700000 IGS_114 igs ndhG|ndhE ndhG-ndhE 120747 120962 0 216 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhE gene ndhE ndhE 120963 121268 1 306 SSC 0.000000 0 0 300 167 no 0.000000 1 0.000000 NA 1.000000 31.400000 IGS_115 igs ndhE|psaC ndhE-psaC 121269 121574 0 306 SSC 0.003268 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.500000 psaC gene psaC psaC 121575 121820 1 246 SSC 0.000000 0 0 138 300 no 0.000000 1 0.000000 NA 1.000000 29.100000 IGS_116 igs psaC|ndhD psaC-ndhD 121821 121934 0 114 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhD gene ndhD ndhD 121935 123440 1 1506 SSC 0.001328 2 0 300 38 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_117 igs ndhD|ccsA ndhD-ccsA 123441 123671 0 231 SSC 0.008850 2 5 275 300 no 1.000000 2 1.000000 NA 0.978355 59.700000 ccsA gene ccsA ccsA 123672 124649 -1 978 SSC 0.002045 2 0 190 268 no 1.000000 2 1.000000 NA 1.000000 59.200000 IGS_118 igs ccsA|trnL(tag) ccsA-trnL(tag) 124650 124740 0 91 SSC 0.000000 0 0 137 177 no 0.000000 1 0.000000 NA 1.000000 29.000000 trnL(tag) tRNA trnL(tag) trnL(tag) 124741 124820 -1 80 SSC 0.000000 0 0 228 97 no 0.000000 1 0.000000 NA 1.000000 26.000000 IGS_119 igs trnL(tag)|ndhF trnL(tag)-ndhF 124821 125767 0 947 SSC 0.021889 19 79 300 227 yes 1.000000 2 1.000000 NA 0.916579 75.000000 ndhF gene ndhF ndhF 125768 128092 1 2325 SSC 0.001325 3 61 188 300 no 1.000000 2 1.000000 NA 0.973763 59.400000 ycf1 gene ycf1 ycf1 128007 128549 -1 543 IRa 0.000000 0 61 300 300 no 1.000000 2 1.000000 NA 0.887661 60.700000 IGS_121 igs ycf1|trnN(gtt) ycf1-trnN(gtt) 128550 128904 0 355 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.900000 trnN(gtt) tRNA trnN(gtt) trnN(gtt) 128905 128978 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_122 igs trnN(gtt)|trnR(acg) trnN(gtt)-trnR(acg) 128979 129604 0 626 IRa 0.001605 1 3 300 300 no 1.000000 2 1.000000 NA 0.995208 60.100000 trnR(acg) tRNA trnR(acg) trnR(acg) 129605 129679 -1 75 IRa 0.000000 0 0 143 300 no 0.000000 1 0.000000 NA 1.000000 29.500000 IGS_123 igs trnR(acg)|BKH98_gr004 trnR(acg)-BKH98_gr004 129680 129928 0 249 IRa 0.000000 0 0 218 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 BKH98_gr004 rRNA BKH98_gr004 BKH98_gr004 129929 130049 -1 121 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_124 igs BKH98_gr004|BKH98_gr003 BKH98_gr004-BKH98_gr003 130050 130282 0 233 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 BKH98_gr003 rRNA BKH98_gr003 BKH98_gr003 130283 130386 -1 104 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_125 igs BKH98_gr003|BKH98_gr002 BKH98_gr003-BKH98_gr002 130387 130487 0 101 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 BKH98_gr002 rRNA BKH98_gr002 BKH98_gr002 130488 133300 -1 2813 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_126 igs BKH98_gr002|trnA-UGC BKH98_gr002-trnA-UGC 133301 133457 0 157 IRa 0.000000 0 0 300 261 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 133458 133492 -1 35 IRa 0.000000 0 0 300 226 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 134306 134340 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_129 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 134341 134404 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 134405 134439 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 135390 135431 -1 42 IRa 0.023810 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 66.200000 IGS_132 igs trnI-GAU|BKH98_gr001 trnI-GAU-BKH98_gr001 135432 135714 0 283 IRa 0.000000 0 0 19 300 no 0.000000 1 0.000000 NA 1.000000 20.200000 BKH98_gr001 rRNA BKH98_gr001 BKH98_gr001 135715 137205 -1 1491 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_133 igs BKH98_gr001|trnV(gac) BKH98_gr001-trnV(gac) 137206 137426 0 221 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV(gac) tRNA trnV(gac) trnV(gac) 137427 137498 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_134 igs trnV(gac)|rps7 trnV(gac)-rps7 137499 140151 0 2653 IRa 0.002643 7 4 300 300 no 1.000000 2 1.000000 NA 0.998492 58.000000 rps7 gene rps7 rps7 140152 140619 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_135 igs rps7|ndhB rps7-ndhB 140620 140975 0 356 IRa 0.005618 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 ndhB gene ndhB ndhB 140976 143156 1 2181 IRa 0.000467 1 39 45 300 no 1.000000 2 1.000000 NA 0.982118 47.700000 IGS_136 igs ndhB|trnL(caa) ndhB-trnL(caa) 143157 143748 0 592 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 39.800000 trnL(caa) tRNA trnL(caa) trnL(caa) 143749 143831 1 83 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_137 igs trnL(caa)|ycf2 trnL(caa)-ycf2 143832 144416 0 585 IRa 0.000000 0 195 300 225 no 1.000000 2 1.000000 NA 0.666667 55.300000 ycf2 gene ycf2 ycf2 144417 151325 -1 6909 IRa 0.000145 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_138 igs ycf2|trnM(cat) ycf2-trnM(cat) 151326 151413 0 88 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnM(cat) tRNA trnM(cat) trnM(cat) 151414 151488 1 75 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_139 igs trnM(cat)|rpl23 trnM(cat)-rpl23 151489 151931 0 443 IRa 0.002257 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.800000 rpl23 gene rpl23 rpl23 151932 152213 1 282 IRa 0.000000 0 0 119 300 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_140 igs rpl23|rpl2 rpl23-rpl2 152214 152231 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 152232 153741 1 1510 IRa 0.000000 0 0 300 230 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_141 igs rpl2|trnH(gtg) rpl2-trnH(gtg) 153742 16 0 116 IRa 0.000000 0 15 300 114 no 1.000000 2 1.000000 NA 0.870690 48.700000