primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-CAC-psbA_p1 trnH-CAC-psbA 1 CTGCCTTAATCCACTTGGCT GTAACGCTCACAACTTCCCT 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.300108 77 393 376-478 1.000000 89.1 trnH-CAC-psbA_p2 trnH-CAC-psbA 2 ACTGCCTTAATCCACTTGGC GTAACGCTCACAACTTCCCT 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.325895 77 393 377-479 1.000000 88.9 trnH-CAC-psbA_p3 trnH-CAC-psbA 3 CTGCCTTAATCCACTTGGCT TGAACGTAACGCTCACAACT 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.347658 77 393 381-483 1.000000 88.6 trnH-CAC-psbA_p4 trnH-CAC-psbA 4 ACTGCCTTAATCCACTTGGC TGAACGTAACGCTCACAACT 20 20 50.0 45.0 58.2 57.8 0.0 0.0 0.373445 77 393 382-484 1.000000 88.4 trnH-CAC-psbA_p5 trnH-CAC-psbA 5 CTGCCTTAATCCACTTGGCT ATGCATGAACGTAACGCTCA 20 20 50.0 45.0 57.9 58.3 0.0 0.0 0.413984 77 393 386-488 1.000000 88.0 psbK-psbI_p1 psbK-psbI 1 GTTTGGCAAGCAGCTGTAAG TTCTTCACGTCCCGGATTAC 20 20 50.0 50.0 57.9 57.3 16.6 0.7 0.716283 7045 7359 445-457 1.000000 79.1 psbK-psbI_p2 psbK-psbI 2 AGCAGCTGTAAGTTTTCGCT TTCTTCACGTCCCGGATTAC 20 20 45.0 50.0 58.1 57.3 16.6 0.7 0.775953 7045 7359 437-449 1.000000 78.7 psbK-psbI_p3 psbK-psbI 3 TGGCAAGCAGCTGTAAGTTT TTCTTCACGTCCCGGATTAC 20 20 45.0 50.0 58.3 57.3 16.6 0.7 0.968992 7045 7359 442-454 1.000000 77.1 psbK-psbI_p4 psbK-psbI 4 TTGGCAAGCAGCTGTAAGTT TTCTTCACGTCCCGGATTAC 20 20 45.0 50.0 58.3 57.3 16.6 0.7 0.968992 7045 7359 443-455 1.000000 77.1 psbK-psbI_p5 psbK-psbI 5 TTTGGCAAGCAGCTGTAAGT TTCTTCACGTCCCGGATTAC 20 20 45.0 50.0 58.3 57.3 16.6 0.7 0.968992 7045 7359 444-456 1.000000 77.0 trnS-AGC-trnG-GGA_p1 trnS-AGC-trnG-GGA 1 CCAACGCTTTAGTCCACTCA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 57.8 55.5 0.0 0.0 3.699660 7650 8301 700-737 1.000000 57.4 trnS-AGC-trnG-GGA_p2 trnS-AGC-trnG-GGA 2 AACGCTTTAGTCCACTCAGC ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.2 55.5 2.0 0.0 3.738818 7650 8301 698-735 1.000000 57.1 trnS-AGC-trnG-GGA_p3 trnS-AGC-trnG-GGA 3 CCAACGCTTTAGTCCACTCA AACGAATCACACTTTTACCACT 20 22 50.0 36.4 57.8 56.2 0.0 0.0 3.940131 7650 8301 701-738 1.000000 55.5 trnS-AGC-trnG-GGA_p4 trnS-AGC-trnG-GGA 4 GCTTTAGTCCACTCAGCCAT ACGAATCACACTTTTACCACT 20 21 50.0 38.1 57.6 55.5 0.9 0.0 3.945791 7650 8301 695-732 1.000000 55.5 trnS-AGC-trnG-GGA_p5 trnS-AGC-trnG-GGA 5 AACGCTTTAGTCCACTCAGC AACGAATCACACTTTTACCACT 20 22 50.0 36.4 58.2 56.2 2.0 0.0 3.979289 7650 8301 699-736 1.000000 55.2 trnG-GGA-trnR-AGA_p1 trnG-GGA-trnR-AGA 1 AGCCTTCCAAGCTAACGATG TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 58.0 53.9 0.0 3.0 4.105791 9096 9253 279-284 1.000000 51.1 trnG-GGA-trnR-AGA_p2 trnG-GGA-trnR-AGA 2 ACCCTTAGCCTTCCAAGCTA TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 58.0 53.9 0.0 3.0 4.109107 9096 9253 285-290 1.000000 51.0 trnG-GGA-trnR-AGA_p3 trnG-GGA-trnR-AGA 3 CGACGTCGACTAAAACCCTT TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 57.9 53.9 33.4 3.0 4.132047 9096 9253 299-304 1.000000 50.7 trnG-GGA-trnR-AGA_p4 trnG-GGA-trnR-AGA 4 AAACCCTTAGCCTTCCAAGC TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 58.1 53.9 0.0 3.0 4.151221 9096 9253 287-292 1.000000 50.7 trnG-GGA-trnR-AGA_p5 trnG-GGA-trnR-AGA 5 AGCCTTCCAAGCTAACGATG TTGATATTGCGTCCAATAGGA 20 21 50.0 38.1 58.0 54.8 0.0 3.0 4.230351 9096 9253 280-285 1.000000 50.1 psbM-trnD-GAC_p1 psbM-trnD-GAC 1 TGAGAATGAAGAGTGCAGTAGC GTTCGAGCCCCGTCAGTC 22 18 45.5 66.7 58.1 60.1 0.0 0.0 6.271365 28584 29546 1033-1043 1.000000 43.3 psbM-trnD-GAC_p2 psbM-trnD-GAC 2 GAGAATGAAGAGTGCAGTAGC GTTCGAGCCCCGTCAGTC 21 18 47.6 66.7 56.4 60.1 0.0 0.0 6.682031 28584 29546 1032-1042 1.000000 43.3 psbM-trnD-GAC_p3 psbM-trnD-GAC 3 AGGAATGAGAATGAAGAGTGCA GTTCGAGCCCCGTCAGTC 22 18 40.9 66.7 57.4 60.1 0.0 0.0 6.690813 28584 29546 1038-1048 1.000000 43.3 psbM-trnD-GAC_p4 psbM-trnD-GAC 4 TGAGAATGAAGAGTGCAGTAGC GAGCACCGCCCTGTCAAG 22 18 45.5 66.7 58.1 60.7 0.0 0.0 6.889262 28584 29546 1064-1074 1.000000 43.2 psbM-trnD-GAC_p5 psbM-trnD-GAC 5 TGAGAATGAAGAGTGCAGTAGC GCCCTGTCAAGGCGGAAG 22 18 45.5 66.7 58.1 60.7 0.0 0.0 6.893189 28584 29546 1057-1067 1.000000 43.2 trnE-GAA-trnT-ACC_p1 trnE-GAA-trnT-ACC 1 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 30270 30802 666-686 1.000000 86.5 trnE-GAA-trnT-ACC_p2 trnE-GAA-trnT-ACC 2 TTTCGTAGTACCCTACCCCC CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 57.8 58.1 0.0 0.0 0.223247 30270 30802 645-665 1.000000 86.3 trnE-GAA-trnT-ACC_p3 trnE-GAA-trnT-ACC 3 TTTCGTAGTACCCTACCCCC TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.245401 30270 30802 642-662 1.000000 86.1 trnE-GAA-trnT-ACC_p4 trnE-GAA-trnT-ACC 4 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 30270 30802 628-648 1.000000 86.1 trnE-GAA-trnT-ACC_p5 trnE-GAA-trnT-ACC 5 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 30270 30802 607-627 1.000000 86.1 trnT-ACC-psbD_p1 trnT-ACC-psbD 1 GGCGTAAGTCATCGGTTCAA TTTACCAAGGGCTATAGTCA 20 20 50.0 40.0 58.3 53.0 0.0 6.7 5.273069 30875 32091 1273-1304 1.000000 45.8 trnT-ACC-psbD_p2 trnT-ACC-psbD 2 GTGGTAGAGTAACGCCATGG TTTACCAAGGGCTATAGTCA 20 20 55.0 40.0 58.1 53.0 7.6 6.7 5.054330 30875 32091 1296-1327 1.000000 45.7 trnT-ACC-psbD_p3 trnT-ACC-psbD 3 GTGGTAGAGTAACGCCATGG TTACCAAGGGCTATAGTCAT 20 20 55.0 40.0 58.1 52.8 7.6 6.7 5.305690 30875 32091 1295-1326 1.000000 45.7 trnT-ACC-psbD_p4 trnT-ACC-psbD 4 TCAGTGGTAGAGTAACGCCA TTTACCAAGGGCTATAGTCA 20 20 50.0 40.0 58.1 53.0 0.0 6.7 5.076485 30875 32091 1299-1330 1.000000 45.6 trnT-ACC-psbD_p5 trnT-ACC-psbD 5 TCAGTGGTAGAGTAACGCCA TTACCAAGGGCTATAGTCAT 20 20 50.0 40.0 58.1 52.8 0.0 6.7 5.327845 30875 32091 1298-1329 1.000000 45.6 ndhK-ndhC_p1 ndhK-ndhC 1 GGCTGGAAAGTCTTGACCAA GGCGAAAGGGAGCATTAGAA 20 20 50.0 50.0 58.0 58.0 11.3 0.0 0.057130 49258 49320 187-196 1.000000 84.6 ndhK-ndhC_p2 ndhK-ndhC 2 GTTGTTCGATCAAGTACGGGA GGCGAAAGGGAGCATTAGAA 21 20 47.6 50.0 58.0 58.0 9.1 0.0 1.087954 49258 49320 125-134 1.000000 78.7 ndhK-ndhC_p3 ndhK-ndhC 3 AGGCTGGAAAGTCTTGACCA GGCGAAAGGGAGCATTAGAA 20 20 50.0 50.0 58.9 58.0 10.2 0.0 0.898075 49258 49320 188-197 1.000000 77.8 ndhK-ndhC_p4 ndhK-ndhC 4 ACCATAAAGAAGCGGCCATA GGCGAAAGGGAGCATTAGAA 20 20 45.0 50.0 57.0 58.0 2.2 0.0 1.059612 49258 49320 207-216 1.000000 76.1 ndhK-ndhC_p5 ndhK-ndhC 5 GGCTGGAAAGTCTTGACCAA TGGCGAAAGGGAGCATTAGA 20 20 50.0 50.0 58.0 59.1 11.3 0.0 1.109833 49258 49320 188-197 1.000000 76.1 ycf4-cemA_p1 ycf4-cemA 1 TTGGCTTACTTCTTGCGTGT AGAGAGATCAACCAGGGCAA 20 20 45.0 50.0 58.0 58.3 0.0 0.0 0.376743 59649 60101 531-566 1.000000 83.3 ycf4-cemA_p2 ycf4-cemA 2 TTGGCTTACTTCTTGCGTGT TCAACCAGGGCAAAAAGACT 20 20 45.0 45.0 58.0 57.5 0.0 0.0 0.490807 59649 60101 524-559 1.000000 82.4 ycf4-cemA_p3 ycf4-cemA 3 TTGGCTTACTTCTTGCGTGT GAGAGATCAACCAGGGCAAA 20 20 45.0 50.0 58.0 57.5 0.0 0.0 0.535105 59649 60101 530-565 1.000000 82.1 ycf4-cemA_p4 ycf4-cemA 4 TTGGCTTACTTCTTGCGTGT AGAGAGAGATCAACCAGGGC 20 20 45.0 55.0 58.0 58.5 0.0 0.0 0.543247 59649 60101 533-568 1.000000 82.0 ycf4-cemA_p5 ycf4-cemA 5 TTGGCTTACTTCTTGCGTGT GCAGAGAGAGATCAACCAGG 20 20 45.0 55.0 58.0 57.4 0.0 0.0 0.638677 59649 60101 535-570 1.000000 81.2 psaJ-rpl33_p1 psaJ-rpl33 1 ACATATCTTTCCGTAGCGCC AACATCTTTACCCTTGGCCA 20 20 50.0 45.0 57.8 57.0 2.3 0.0 1.141137 66134 66540 542-548 1.000000 75.4 psaJ-rpl33_p2 psaJ-rpl33 2 TAGCGCCGGTACTAAGTACT AACATCTTTACCCTTGGCCA 20 20 50.0 45.0 57.7 57.0 2.3 0.0 1.322803 66134 66540 529-535 1.000000 74.1 psaJ-rpl33_p3 psaJ-rpl33 3 ACATATCTTTCCGTAGCGCC GAACATCTTTACCCTTGGCCA 20 21 50.0 47.6 57.8 58.2 2.3 0.0 1.347678 66134 66540 543-549 1.000000 73.8 psaJ-rpl33_p4 psaJ-rpl33 4 ACATATCTTTCCGTAGCGCC CGAACATCTTTACCCTTGGC 20 20 50.0 50.0 57.8 56.8 2.3 0.0 1.355349 66134 66540 544-550 1.000000 73.7 psaJ-rpl33_p5 psaJ-rpl33 5 ACATATCTTTCCGTAGCGCC ACATCTTTACCCTTGGCCAT 20 20 50.0 45.0 57.8 56.8 2.3 6.1 1.375844 66134 66540 541-547 1.000000 73.5 petD-rpoA_p1 petD-rpoA 1 TGGTTAGGTATTGGAGCAACA ATTGAACATTTTCACATAGAAGA 21 23 42.9 26.1 56.9 52.4 0.0 0.0 10.712610 76811 76996 306-309 1.000000 43.4 petD-rpoA_p2 petD-rpoA 2 TGGTTAGGTATTGGAGCAACA TTGAACATTTTCACATAGAAGAT 21 23 42.9 26.1 56.9 52.4 0.0 0.0 10.712610 76811 76996 305-308 1.000000 43.4 petD-rpoA_p3 petD-rpoA 3 TGGTTAGGTATTGGAGCAACA AATTGAACATTTTCACATAGAAGA 21 24 42.9 25.0 56.9 53.2 0.0 0.0 10.878325 76811 76996 307-310 1.000000 43.4 petD-rpoA_p4 petD-rpoA 4 TGGTTAGGTATTGGAGCAACA ATTGAACATTTTCACATAGAAGAT 21 24 42.9 25.0 56.9 53.0 0.0 0.0 11.084578 76811 76996 306-309 1.000000 43.4 petD-rpoA_p5 petD-rpoA 5 AGGTATTGGAGCAACATTACCA TTGAACATTTTCACATAGAAGAT 22 23 40.9 26.1 57.4 52.4 22.6 0.0 11.217142 76811 76996 300-303 1.000000 43.4 ndhF-rpl32_p1 ndhF-rpl32 1 GTGGAATGAAAGGGATGATCCA ACGAATACGCTTTTTCGAGA 22 20 45.5 40.0 58.1 55.5 14.4 19.5 4.551159 111816 112675 669-964 1.000000 53.5 ndhF-rpl32_p2 ndhF-rpl32 2 AGTGGAATGAAAGGGATGATCC ACGAATACGCTTTTTCGAGA 22 20 45.5 40.0 57.8 55.5 1.9 19.5 4.629497 111816 112675 670-965 1.000000 52.9 ndhF-rpl32_p3 ndhF-rpl32 3 TGGAATGAAAGGGATGATCCA ACGAATACGCTTTTTCGAGA 21 20 42.9 40.0 56.7 55.5 14.4 19.5 4.785040 111816 112675 668-963 1.000000 51.6 ndhF-rpl32_p4 ndhF-rpl32 4 GTGGAATGAAAGGGATGATCCA ACGAATACGCTTTTTCGAGAT 22 21 45.5 38.1 58.1 56.1 14.4 19.5 4.995100 111816 112675 669-964 1.000000 50.0 ndhF-rpl32_p5 ndhF-rpl32 5 AGTGGAATGAAAGGGATGATCC ACGAATACGCTTTTTCGAGAT 22 21 45.5 38.1 57.8 56.1 1.9 19.5 5.073438 111816 112675 670-965 1.000000 49.9 rpl32-trnL-CUA_p1 rpl32-trnL-CUA 1 CTTTCTACAGGTAATTCAAAAAGT AGCAGCGTGTCTACCAATTT 24 20 29.2 45.0 53.5 57.8 0.0 0.0 8.689645 112835 113295 541-903 1.000000 44.7 rpl32-trnL-CUA_p2 rpl32-trnL-CUA 2 CTTTCTACAGGTAATTCAAAAAGT GAGCAGCGTGTCTACCAATT 24 20 29.2 50.0 53.5 58.3 0.0 0.0 8.777787 112835 113295 542-904 1.000000 44.7 rpl32-trnL-CUA_p3 rpl32-trnL-CUA 3 CTTTCTACAGGTAATTCAAAAAGT TCCTAAGAGCAGCGTGTCTA 24 20 29.2 50.0 53.5 57.9 0.0 0.0 8.628918 112835 113295 548-910 1.000000 44.6 rpl32-trnL-CUA_p4 rpl32-trnL-CUA 4 CTTTCTACAGGTAATTCAAAAAGT CCTAAGAGCAGCGTGTCTAC 24 20 29.2 55.0 53.5 57.8 0.0 0.0 8.700935 112835 113295 547-909 1.000000 44.6 rpl32-trnL-CUA_p5 rpl32-trnL-CUA 5 CTTTCTACAGGTAATTCAAAAAGT CTAAGAGCAGCGTGTCTACC 24 20 29.2 55.0 53.5 57.8 0.0 0.0 8.700935 112835 113295 546-908 1.000000 44.6 ccsA-ndhD_p1 ccsA-ndhD 1 ATTCTGCAATTGTGGCTTCT GCAAATGACAAGGTCGAATCC 20 21 40.0 47.6 55.9 57.9 7.4 0.0 3.237790 114471 114683 364-388 1.000000 59.1 ccsA-ndhD_p2 ccsA-ndhD 2 TGGATATGCTATTTTGGCGTCA GCAAATGACAAGGTCGAATCC 22 21 40.9 47.6 58.2 57.9 0.0 0.0 3.322183 114471 114683 326-350 1.000000 58.9 ccsA-ndhD_p3 ccsA-ndhD 3 TGCTATTTTGGCGTCAATCT GCAAATGACAAGGTCGAATCC 20 21 40.0 47.6 55.7 57.9 1.9 0.0 3.408873 114471 114683 320-344 1.000000 58.4 ccsA-ndhD_p4 ccsA-ndhD 4 AATTCTGCAATTGTGGCTTCT GCAAATGACAAGGTCGAATCC 21 21 38.1 47.6 56.7 57.9 7.4 0.0 3.458146 114471 114683 365-389 1.000000 57.3 ccsA-ndhD_p5 ccsA-ndhD 5 TGCTATTTTGGCGTCAATCTT GCAAATGACAAGGTCGAATCC 21 21 38.1 47.6 56.5 57.9 1.9 0.0 3.628882 114471 114683 320-344 1.000000 56.6 ndhE-ndhG_p1 ndhE-ndhG 1 GGCACTCAAAACAAGTACATGT AATTTCGGTGGCTCGTCAAT 22 20 40.9 45.0 57.4 58.2 2.7 1.4 2.746936 117132 117375 265-318 1.000000 65.9 ndhE-ndhG_p2 ndhE-ndhG 2 AGGCACTCAAAACAAGTACATG AATTTCGGTGGCTCGTCAAT 22 20 40.9 45.0 57.2 58.2 0.0 1.4 3.014909 117132 117375 266-319 1.000000 63.7 ndhE-ndhG_p3 ndhE-ndhG 3 GGCACTCAAAACAAGTACATGT TTTCGGTGGCTCGTCAATAA 22 20 40.9 45.0 57.4 57.5 2.7 1.4 3.027213 117132 117375 263-316 1.000000 63.6 ndhE-ndhG_p4 ndhE-ndhG 4 AGGCACTCAAAACAAGTACA AATTTCGGTGGCTCGTCAAT 20 20 40.0 45.0 55.1 58.2 0.0 1.4 3.065586 117132 117375 266-319 1.000000 63.3 ndhE-ndhG_p5 ndhE-ndhG 5 GGCACTCAAAACAAGTACATGTT AATTTCGGTGGCTCGTCAAT 23 20 39.1 45.0 58.1 58.2 10.6 1.4 3.246638 117132 117375 265-318 1.000000 61.9 ycf1_p1 ycf1 1 CCGTCCCCCAAACAGTTAAA GGATCTCTCGCGGAAGAATC 20 20 50.0 55.0 58.0 57.9 0.0 6.1 0.074848 125980 126099 1200-1209 1.000000 84.5 ycf1_p2 ycf1 2 CCGTCCCCCAAACAGTTAAA CTGGAAGAATTGGAAGGCGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.129795 125980 126099 838-847 0.666667 70.3 ycf1_p3 ycf1 3 CCGTCCCCCAAACAGTTAAA AAGGCGAAACAGACGAAACT 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.066469 125980 126099 825-834 0.500000 61.7 ycf1_p4 ycf1 4 CCGTCCCCCAAACAGTTAAA GACGAAACTGTACCAACGGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.154530 125980 126099 814-823 0.500000 61.0 ycf1_p5 ycf1 5 CCGTCCCCCAAACAGTTAAA TGGCTTTGATCCGTTATGCA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.137226 125980 126099 684-687 0.333333 52.4