primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnN-GUU-rps15_p1 trnN-GUU-rps15 1 AAAAGCTAAGCGTGTGGTCA AAATGAGGGGCGCTTTCTAG 20 20 45.0 50.0 58.0 58.0 0.0 7.6 0.082329 110869 110988 805-805 0.500000 59.3 trnN-GUU-rps15_p2 trnN-GUU-rps15 2 AAAAGCTAAGCGTGTGGTCA ACCAAGCCGGAGATTGAATC 20 20 45.0 50.0 58.0 58.0 0.0 5.0 0.082329 110869 110988 1085-1085 0.500000 59.3 trnN-GUU-rps15_p3 trnN-GUU-rps15 3 AAAAGCTAAGCGTGTGGTCA GACCAAGCCGGAGATTGAAT 20 20 45.0 50.0 58.0 58.0 0.0 5.0 0.082329 110869 110988 1086-1086 0.500000 59.3 trnN-GUU-rps15_p4 trnN-GUU-rps15 4 TTCTTGAACGGGCCATATCG AAATGAGGGGCGCTTTCTAG 20 20 50.0 50.0 58.1 58.0 4.4 7.6 0.096018 110869 110988 1116-1116 0.500000 59.2 trnN-GUU-rps15_p5 trnN-GUU-rps15 5 TTCTTGAACGGGCCATATCG ACCAAGCCGGAGATTGAATC 20 20 50.0 50.0 58.1 58.0 4.4 5.0 0.096018 110869 110988 1396-1396 0.500000 59.2 rps15_p1 rps15 1 ATGGTAAGGGTGCGGATAGA GGTCTGTGCCCCAATATCTG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.124238 114378 114641 1298-1298 0.500000 59.0 rps15_p2 rps15 2 ATGGTAAGGGTGCGGATAGA CACCAATAATGCCTACGCCT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.129791 114378 114641 1542-1542 0.500000 59.0 rps15_p3 rps15 3 ATGGTAAGGGTGCGGATAGA TCCACCAATAATGCCTACGC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.135316 114378 114641 1544-1544 0.500000 58.9 rps15_p4 rps15 4 ATGGTAAGGGTGCGGATAGA TCCTAACTGTTCGGGTCCAT 20 20 50.0 50.0 57.9 58.1 0.0 10.8 0.150126 114378 114641 1181-1181 0.500000 58.8 rps15_p5 rps15 5 ATGGTAAGGGTGCGGATAGA AACACCATGCATTGATGGGT 20 20 50.0 45.0 57.9 58.1 0.0 8.9 0.155733 114378 114641 986-986 0.500000 58.8 rps15-ndhH_p1 rps15-ndhH 1 TTGGGAAAACGTCAACGACT GGTCTGTGCCCCAATATCTG 20 20 45.0 55.0 58.0 58.0 9.9 0.0 0.054131 114642 114741 592-592 0.500000 59.6 rps15-ndhH_p2 rps15-ndhH 2 TTGGGAAAACGTCAACGACT CACCAATAATGCCTACGCCT 20 20 45.0 50.0 58.0 58.0 9.9 0.0 0.059685 114642 114741 836-836 0.500000 59.5 rps15-ndhH_p3 rps15-ndhH 3 TTGGGAAAACGTCAACGACT TCCACCAATAATGCCTACGC 20 20 45.0 50.0 58.0 58.0 9.9 0.0 0.065210 114642 114741 838-838 0.500000 59.5 rps15-ndhH_p4 rps15-ndhH 4 TTGGGAAAACGTCAACGACT TCCTAACTGTTCGGGTCCAT 20 20 45.0 50.0 58.0 58.1 9.9 10.8 0.080019 114642 114741 475-475 0.500000 59.4 rps15-ndhH_p5 rps15-ndhH 5 TTGGGAAAACGTCAACGACT AACACCATGCATTGATGGGT 20 20 45.0 45.0 58.0 58.1 9.9 8.9 0.085626 114642 114741 280-280 0.500000 59.3 ndhH_p1 ndhH 1 TTGGGAAAACGTCAACGACT TAGGGCTTGAAGGATTCCCA 20 20 45.0 50.0 58.0 58.0 9.9 8.1 0.047194 114742 115923 1616-1616 0.500000 59.6 ndhH_p2 ndhH 2 TTGGGAAAACGTCAACGACT GCTAGGGCTTGAAGGATTCC 20 20 45.0 55.0 58.0 58.0 9.9 0.0 0.052738 114742 115923 1618-1618 0.500000 59.6 ndhH_p3 ndhH 3 TTGGGAAAACGTCAACGACT AGTCCAAGGGGAGCAATACT 20 20 45.0 50.0 58.0 58.0 9.9 0.0 0.054416 114742 115923 1822-1822 0.500000 59.6 ndhH_p4 ndhH 4 TTGGGAAAACGTCAACGACT CATCTGCTAGGGCTTGAAGG 20 20 45.0 55.0 58.0 58.0 9.9 0.0 0.062451 114742 115923 1623-1623 0.500000 59.5 ndhH_p5 ndhH 5 TTGGGAAAACGTCAACGACT CCATCTGCTAGGGCTTGAAG 20 20 45.0 55.0 58.0 58.0 9.9 0.0 0.062451 114742 115923 1624-1624 0.500000 59.5 ndhA_p1 ndhA 1 GAAACCCGGCGTTTTGTTAG GGTAACCGACCTAACGCAAT 20 20 50.0 50.0 58.0 58.0 18.3 0.0 0.055050 115925 118090 2988-2988 0.500000 59.6 ndhA_p2 ndhA 2 AGCCCCAAAAGGAGAATTGG GGTAACCGACCTAACGCAAT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.071559 115925 118090 2866-2866 0.500000 59.4 ndhA_p3 ndhA 3 GCGTAGGCATTATTGGTGGA GCGTGGGACAAGGTAATCAT 20 20 50.0 50.0 58.0 58.0 1.7 0.0 0.076593 115925 118090 2906-2906 0.500000 59.4 ndhA_p4 ndhA 4 GAAACCCGGCGTTTTGTTAG GCGTGGGACAAGGTAATCAT 20 20 50.0 50.0 58.0 58.0 18.3 0.0 0.079101 115925 118090 2649-2649 0.500000 59.4 ndhA_p5 ndhA 5 AGCCCCAAAAGGAGAATTGG GCGTGGGACAAGGTAATCAT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.095611 115925 118090 2527-2527 0.500000 59.2 ndhI_p1 ndhI 1 GCGATGGAGCAGTGATGTTA CCCACGGTCCAAAGATGAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.155739 118163 118663 1770-1770 0.500000 58.8 ndhI_p2 ndhI 2 GCGATGGAGCAGTGATGTTA GCGGCAGCTACAAAATAGGA 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.396331 118163 118663 1665-1665 0.500000 56.8 ndhI_p3 ndhI 3 GCGATGGAGCAGTGATGTTA CGTAAATAAGGAGTTGCGCG 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.407048 118163 118663 1682-1682 0.500000 56.7 ndhI_p4 ndhI 4 GCGATGGAGCAGTGATGTTA TCCCGTACCATGACGTATCT 20 20 50.0 50.0 58.1 57.6 0.0 6.2 0.413382 118163 118663 1850-1850 0.500000 56.7 ndhI_p5 ndhI 5 GCGATGGAGCAGTGATGTTA CCCGATCCCAGAGAGACTAA 20 20 50.0 55.0 58.1 57.6 0.0 0.0 0.426666 118163 118663 1536-1536 0.500000 56.6 ndhG_p1 ndhG 1 TCAAATTGCGTTAGGTCGGT CCGTTGGTAATAGATCGCCC 20 20 45.0 55.0 57.8 58.2 0.0 0.0 0.380845 118998 119528 1083-1083 0.500000 57.0 ndhG_p2 ndhG 2 GAGGCCGAATCCACTTTGAA CCGTTGGTAATAGATCGCCC 20 20 50.0 55.0 58.2 58.2 0.0 0.0 0.386778 118998 119528 1336-1336 0.500000 56.9 ndhG_p3 ndhG 3 TCAAATTGCGTTAGGTCGGT TCCAGACACATAAGGGCTCT 20 20 45.0 50.0 57.8 57.7 0.0 0.0 0.427003 118998 119528 1287-1287 0.500000 56.6 ndhG_p4 ndhG 4 GAGGCCGAATCCACTTTGAA TCCAGACACATAAGGGCTCT 20 20 50.0 50.0 58.2 57.7 0.0 0.0 0.432935 118998 119528 1540-1540 0.500000 56.5 ndhG_p5 ndhG 5 TCAAATTGCGTTAGGTCGGT CCAGTCCAATAGCTGCTTCA 20 20 45.0 50.0 57.8 57.6 0.0 7.8 0.581122 118998 119528 1418-1418 0.500000 55.4 ndhG-ndhE_p1 ndhG-ndhE 1 TTTCATCTTTGGACCGTGGG TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.1 58.0 0.0 12.1 0.111169 119529 119758 1190-1190 0.500000 59.1 ndhG-ndhE_p2 ndhG-ndhE 2 TTTCATCTTTGGACCGTGGG CAGTCCTCTGTTCTTGGAGC 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.187565 119529 119758 1193-1193 0.500000 58.5 ndhG-ndhE_p3 ndhG-ndhE 3 TTTCATCTTTGGACCGTGGG GTCCTCTGTTCTTGGAGCAG 20 20 50.0 55.0 58.1 57.9 0.0 5.3 0.187565 119529 119758 1191-1191 0.500000 58.5 ndhG-ndhE_p4 ndhG-ndhE 4 TTTCATCTTTGGACCGTGGG TGCTTTACATCCGTCCCAAG 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.203663 119529 119758 1158-1158 0.500000 58.4 ndhG-ndhE_p5 ndhG-ndhE 5 TTTCATCTTTGGACCGTGGG CTGTTCTTGGAGCAGAAGCA 20 20 50.0 50.0 58.1 58.1 0.0 5.7 0.207498 119529 119758 1186-1186 0.500000 58.3 ndhE_p1 ndhE 1 TTTCATCTTTGGACCGTGGG GGGAGCCAGTGAATATTGGG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.108831 119759 120064 1522-1522 0.500000 59.1 ndhE_p2 ndhE 2 TTTCATCTTTGGACCGTGGG TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.1 58.0 0.0 12.1 0.111169 119759 120064 1190-1190 0.500000 59.1 ndhE_p3 ndhE 3 TTTCATCTTTGGACCGTGGG AAACCCGTGGTCGAAAATCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.125621 119759 120064 1385-1385 0.500000 59.0 ndhE_p4 ndhE 4 TTTCATCTTTGGACCGTGGG CAGTCCTCTGTTCTTGGAGC 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.187565 119759 120064 1193-1193 0.500000 58.5 ndhE_p5 ndhE 5 TTTCATCTTTGGACCGTGGG GTCCTCTGTTCTTGGAGCAG 20 20 50.0 55.0 58.1 57.9 0.0 5.3 0.187565 119759 120064 1191-1191 0.500000 58.5 psaC_p1 psaC 1 GGGCGATCTATTACCAACGG GGGAGCCAGTGAATATTGGG 20 20 55.0 55.0 58.2 58.0 0.0 0.0 0.221112 120315 120560 1148-1148 0.500000 58.2 psaC_p2 psaC 2 GGGCGATCTATTACCAACGG AAACCCGTGGTCGAAAATCA 20 20 55.0 45.0 58.2 58.0 0.0 0.0 0.237902 120315 120560 1011-1011 0.500000 58.1 psaC_p3 psaC 3 AGAGCCCTTATGTGTCTGGA GGGAGCCAGTGAATATTGGG 20 20 50.0 55.0 57.7 58.0 0.0 0.0 0.267269 120315 120560 944-944 0.500000 57.9 psaC_p4 psaC 4 AGAGCCCTTATGTGTCTGGA AAACCCGTGGTCGAAAATCA 20 20 50.0 45.0 57.7 58.0 0.0 0.0 0.284060 120315 120560 807-807 0.500000 57.7 psaC_p5 psaC 5 GGGCGATCTATTACCAACGG TTTGACCGCTGTACATTGCT 20 20 55.0 45.0 58.2 58.1 0.0 0.0 0.317118 120315 120560 1466-1466 0.500000 57.5 ndhD_p1 ndhD 1 TCTGCTCCAAGAACAGAGGA GGGCTACACAGTTACGGTTT 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.189820 120681 122231 2009-2009 0.500000 58.5 ndhD_p2 ndhD 2 TGATTTTCGACCACGGGTTT GGGCTACACAGTTACGGTTT 20 20 45.0 50.0 58.0 57.8 0.0 0.0 0.204272 120681 122231 1814-1814 0.500000 58.4 ndhD_p3 ndhD 3 TCTGCTCCAAGAACAGAGGA GCAATTGTGGCGTCAATAGG 20 20 50.0 50.0 58.0 57.8 0.0 7.4 0.208762 120681 122231 2078-2078 0.500000 58.3 ndhD_p4 ndhD 4 TCTGCTCCAAGAACAGAGGA AACTGTGGGGATTCTTTCGG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.215829 120681 122231 2235-2235 0.500000 58.3 ndhD_p5 ndhD 5 TCTGCTCCAAGAACAGAGGA TGCAAATTCCGCAATTGTGG 20 20 50.0 45.0 58.0 58.2 0.0 28.7 0.222198 120681 122231 2088-2088 0.500000 58.2 ndhD-ccsA_p1 ndhD-ccsA 1 GAGCATATGGGTTGGTTCGT GGGCTACACAGTTACGGTTT 20 20 50.0 50.0 58.0 57.8 4.6 0.0 0.212750 122232 122401 946-946 0.500000 58.3 ndhD-ccsA_p2 ndhD-ccsA 2 GAGCATATGGGTTGGTTCGT GCAATTGTGGCGTCAATAGG 20 20 50.0 50.0 58.0 57.8 4.6 7.4 0.231693 122232 122401 1015-1015 0.500000 58.1 ndhD-ccsA_p3 ndhD-ccsA 3 GATTCTGGACCGCGAGAATT GGGCTACACAGTTACGGTTT 20 20 50.0 50.0 58.1 57.8 18.4 0.0 0.233038 122232 122401 350-350 0.500000 58.1 ndhD-ccsA_p4 ndhD-ccsA 4 GAGCATATGGGTTGGTTCGT AACTGTGGGGATTCTTTCGG 20 20 50.0 50.0 58.0 57.8 4.6 0.0 0.238760 122232 122401 1172-1172 0.500000 58.1 ndhD-ccsA_p5 ndhD-ccsA 5 GAGCATATGGGTTGGTTCGT TGCAAATTCCGCAATTGTGG 20 20 50.0 45.0 58.0 58.2 4.6 28.7 0.245129 122232 122401 1025-1025 0.500000 58.0 ccsA_p1 ccsA 1 GATTCTGGACCGCGAGAATT GAACTCGCTTCACCCTGTAG 20 20 50.0 55.0 58.1 58.0 18.4 0.0 0.061006 122402 123292 1866-1866 0.500000 59.5 ccsA_p2 ccsA 2 TTTTTGATTCTGGACCGCGA GAACTCGCTTCACCCTGTAG 20 20 45.0 55.0 58.1 58.0 8.2 0.0 0.116771 122402 123292 1871-1871 0.500000 59.1 ccsA_p3 ccsA 3 GATTCTGGACCGCGAGAATT GAGTTGAAGACAAGCCGCTA 20 20 50.0 50.0 58.1 57.9 18.4 0.0 0.138961 122402 123292 1394-1394 0.500000 58.9 ccsA_p4 ccsA 4 TAGCTTTTCCATGGCTTCCC GAACTCGCTTCACCCTGTAG 20 20 50.0 55.0 57.9 58.0 7.0 0.0 0.146206 122402 123292 2095-2095 0.500000 58.8 ccsA_p5 ccsA 5 GATTCTGGACCGCGAGAATT TAGACACGCTGCTCTTAGGA 20 20 50.0 50.0 58.1 57.9 18.4 0.0 0.182952 122402 123292 1362-1362 0.500000 58.5 ccsA-trnL-UAG_p1 ccsA-trnL-UAG 1 CCGAAAGAATCCCCACAGTT GAACTCGCTTCACCCTGTAG 20 20 50.0 55.0 57.8 58.0 0.0 0.0 0.202704 123293 123394 1310-1310 0.500000 58.4 ccsA-trnL-UAG_p2 ccsA-trnL-UAG 2 GCCCCCAATAAATCCAACGA GAACTCGCTTCACCCTGTAG 20 20 50.0 55.0 58.2 58.0 0.0 0.0 0.232037 123293 123394 860-860 0.500000 58.1 ccsA-trnL-UAG_p3 ccsA-trnL-UAG 3 CTTAGTGGAAAATGCCCCCA GAACTCGCTTCACCCTGTAG 20 20 50.0 55.0 57.8 58.0 0.0 0.0 0.232460 123293 123394 873-873 0.500000 58.1 ccsA-trnL-UAG_p4 ccsA-trnL-UAG 4 ACTTAGTGGAAAATGCCCCC GAACTCGCTTCACCCTGTAG 20 20 50.0 55.0 57.8 58.0 0.0 0.0 0.234047 123293 123394 874-874 0.500000 58.1 ccsA-trnL-UAG_p5 ccsA-trnL-UAG 5 CCAAGTTTCCTTCGGATCCC GAACTCGCTTCACCCTGTAG 20 20 55.0 55.0 58.2 58.0 6.1 0.0 0.250894 123293 123394 1372-1372 0.500000 58.0 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 TCCTAAGAGCAGCGTGTCTA AAAAGTTTTGTTGTGCGGCA 20 20 50.0 40.0 57.9 57.9 0.0 0.0 0.210332 123475 124084 682-682 0.500000 58.3 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 TCCTAAGAGCAGCGTGTCTA AAAGTTTTGTTGTGCGGCAA 20 20 50.0 40.0 57.9 57.9 0.0 3.2 0.210332 123475 124084 681-681 0.500000 58.3 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 TCCTAAGAGCAGCGTGTCTA AAGTTTTGTTGTGCGGCAAA 20 20 50.0 40.0 57.9 57.9 0.0 3.2 0.210332 123475 124084 680-680 0.500000 58.3 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 TCCTAAGAGCAGCGTGTCTA AGGGAGGGGATATTGGACAG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.248838 123475 124084 749-749 0.500000 58.0 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 AGCAGCGTGTCTACCAATTT AAGTTTTGTTGTGCGGCAAA 20 20 45.0 40.0 57.8 57.9 0.0 3.2 0.271058 123475 124084 673-673 0.500000 57.8 rpl32_p1 rpl32 1 CTACAGGGTGAAGCGAGTTC CAAGGGTATGATCCACGCAT 20 20 55.0 50.0 58.0 57.7 0.0 12.3 0.263175 124085 124246 1017-1017 0.500000 57.9 rpl32_p2 rpl32 2 CTACAGGGTGAAGCGAGTTC AAGCAAGGGTATGATCCACG 20 20 55.0 50.0 58.0 57.7 0.0 0.0 0.334394 124085 124246 1020-1020 0.500000 57.3 rpl32_p3 rpl32 3 TAGCGGCTTGTCTTCAACTC CAAGGGTATGATCCACGCAT 20 20 50.0 50.0 57.9 57.7 8.3 12.3 0.341130 124085 124246 1489-1489 0.500000 57.3 rpl32_p4 rpl32 4 TCCTAAGAGCAGCGTGTCTA CAAGGGTATGATCCACGCAT 20 20 50.0 50.0 57.9 57.7 0.0 12.3 0.385121 124085 124246 1521-1521 0.500000 56.9 rpl32_p5 rpl32 5 ATTTCACCATAGCGGCTTGT CAAGGGTATGATCCACGCAT 20 20 45.0 50.0 57.9 57.7 8.3 12.3 0.389614 124085 124246 1498-1498 0.500000 56.9 rpl32-ndhF_p1 rpl32-ndhF 1 CTACAGGGTGAAGCGAGTTC TCGGAAAAAGAAGAAGCCCC 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.096693 124247 124917 1069-1069 0.500000 59.2 rpl32-ndhF_p2 rpl32-ndhF 2 TGCCGCACAACAAAACTTTT TCGGAAAAAGAAGAAGCCCC 20 20 40.0 50.0 57.9 58.1 0.0 0.0 0.180417 124247 124917 911-911 0.500000 58.6 rpl32-ndhF_p3 rpl32-ndhF 3 TTGCCGCACAACAAAACTTT TCGGAAAAAGAAGAAGCCCC 20 20 40.0 50.0 57.9 58.1 0.0 0.0 0.180417 124247 124917 912-912 0.500000 58.6 rpl32-ndhF_p4 rpl32-ndhF 4 TTTGCCGCACAACAAAACTT TCGGAAAAAGAAGAAGCCCC 20 20 40.0 50.0 57.9 58.1 0.0 0.0 0.180417 124247 124917 913-913 0.500000 58.6 rpl32-ndhF_p5 rpl32-ndhF 5 CTGTCCAATATCCCCTCCCT TCGGAAAAAGAAGAAGCCCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.218923 124247 124917 844-844 0.500000 58.2 ndhF_p1 ndhF 1 TCTTTCAAAGATCCGGCGAA GCAGAATACCGTCACCCATT 20 20 45.0 50.0 57.5 58.0 9.3 0.0 0.504247 124918 127128 2916-2916 0.500000 56.0 ndhF_p2 ndhF 2 TTCTTTCAAAGATCCGGCGA GCAGAATACCGTCACCCATT 20 20 45.0 50.0 57.5 58.0 9.3 0.0 0.504247 124918 127128 2917-2917 0.500000 56.0 ndhF_p3 ndhF 3 TCTTTCAAAGATCCGGCGAA ACAGGAACAAGAGGGATCCA 20 20 45.0 50.0 57.5 58.0 9.3 15.2 0.510653 124918 127128 2750-2750 0.500000 55.9 ndhF_p4 ndhF 4 TTCTTTCAAAGATCCGGCGA ACAGGAACAAGAGGGATCCA 20 20 45.0 50.0 57.5 58.0 9.3 15.2 0.510653 124918 127128 2751-2751 0.500000 55.9 ndhF_p5 ndhF 5 TCTTTCAAAGATCCGGCGAA ACCGTCACCCATTCTGACTA 20 20 45.0 50.0 57.5 58.1 9.3 0.0 0.532839 124918 127128 2909-2909 0.500000 55.7