primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CGAGCCCATATCCTTGCTTT CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.109256 16750 17901 1341-1874 0.973451 90.1 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CGAGCCCATATCCTTGCTTT TCTTCCACTTGCTTCTGCTG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.138913 16750 17901 1432-1965 0.778761 82.0 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CGAGCCCATATCCTTGCTTT TTCAGGCACAACACCATTCA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.091561 16750 17901 2000-2492 0.504425 71.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CGAGCCCATATCCTTGCTTT ATTCCATTCGTGACTGTGGG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.140988 16750 17901 1786-2211 0.141593 56.4 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 CGAGCCCATATCCTTGCTTT GCAGCAGCCACTACATTAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.056966 16750 17901 1605-2059 0.097345 54.4 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.432990 17973 18715 503-1027 1.000000 88.5 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.233476 17973 18715 442-966 0.955752 88.4 trnC-GCA-petN_p3 trnC-GCA-petN 3 GGGGGACTGCAAATCCTTTT AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.4 57.6 14.7 0.0 0.706353 17973 18715 521-1045 1.000000 86.3 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 17973 18715 460-984 0.955752 86.2 trnC-GCA-petN_p5 trnC-GCA-petN 5 TTTCCCCAGTTCAAATCCGG GCCCAAGCGAGACTTACTAT 20 20 50.0 50.0 58.1 57.1 0.0 0.0 0.974912 17973 18715 441-965 0.955752 82.4 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGGAACTAGAATGAACAGTGT GTTCGAGCCCCGTCAGTC 21 18 38.1 66.7 54.2 60.1 0.0 0.0 8.923004 19880 20784 759-1007 1.000000 52.0 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 GCAGTAGGAACTAGAATGAACAGT GTTCGAGCCCCGTCAGTC 24 18 41.7 66.7 58.3 60.1 0.0 0.0 8.400669 19880 20784 764-1012 0.982301 51.3 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 GCAGTAGGAACTAGAATGAACAG GTTCGAGCCCCGTCAGTC 23 18 43.5 66.7 56.7 60.1 0.0 0.0 8.419334 19880 20784 764-1012 0.982301 51.3 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 GCAGTAGGAACTAGAATGAACA GTTCGAGCCCCGTCAGTC 22 18 40.9 66.7 55.6 60.1 0.0 0.0 8.554576 19880 20784 764-1012 0.982301 51.3 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AGAATGAACAGTGTAGTAGCA GTTCGAGCCCCGTCAGTC 21 18 38.1 66.7 54.3 60.1 0.0 0.0 8.802946 19880 20784 752-1000 0.964602 50.6 trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 CGGTGCTCTGACCAATTGAA ATTCTTCTTGGGTCGATGCC 20 20 50.0 50.0 58.5 58.0 7.1 0.0 0.521454 20862 21340 387-635 0.982301 87.1 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 CGGTGCTCTGACCAATTGAA TGGCAATATGTCTACGCTGG 20 20 50.0 50.0 58.5 57.8 7.1 0.0 0.716274 20862 21340 334-582 0.982301 85.6 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 CGGTGCTCTGACCAATTGAA GGCAATATGTCTACGCTGGT 20 20 50.0 50.0 58.5 57.8 7.1 0.0 0.717825 20862 21340 333-581 0.982301 85.5 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 CGGTGCTCTGACCAATTGAA GGGGACGGACTGTAAATTCG 20 20 50.0 55.0 58.5 58.4 7.1 0.0 0.828828 20862 21340 355-603 0.973451 84.3 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 CGGTGCTCTGACCAATTGAA GGGACGGACTGTAAATTCGT 20 20 50.0 50.0 58.5 57.6 7.1 0.0 0.852505 20862 21340 354-602 0.973451 84.1 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 21562 22752 677-1348 0.991150 90.3 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 21562 22752 639-1310 0.991150 89.5 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 21562 22752 618-1289 0.991150 89.3 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TTTCGTAGTACCCTACCCCC CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 57.8 58.1 0.0 0.0 0.223247 21562 22752 656-1327 0.946903 88.1 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 TTTCGTAGTACCCTACCCCC TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.245401 21562 22752 653-1324 0.946903 87.9 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG TCCCTCCGTAACCAGTCATC 20 20 55.0 55.0 58.1 58.5 7.6 0.0 0.582197 22825 24371 1373-1762 0.982301 86.6 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA TCCCTCCGTAACCAGTCATC 20 20 50.0 55.0 58.1 58.5 0.0 0.0 0.604351 22825 24371 1376-1765 0.973451 86.1 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GGCGTAAGTCATCGGTTCAA TCCCTCCGTAACCAGTCATC 20 20 50.0 55.0 58.3 58.5 0.0 0.0 0.800935 22825 24371 1350-1739 1.000000 85.6 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG GTCCCTCCGTAACCAGTCAT 20 20 55.0 55.0 58.1 58.8 7.6 0.0 0.871639 22825 24371 1374-1763 0.982301 84.3 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GTGGTAGAGTAACGCCATGG CCTCCGTAACCAGTCATCCA 20 20 55.0 55.0 58.1 58.8 7.6 0.0 0.872532 22825 24371 1371-1760 0.982301 84.3 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CTTCTCCTGATGGTTGGTCG TACCATTCAACTATATCCGC 20 20 55.0 40.0 58.0 52.3 0.0 0.0 5.738913 27641 28223 470-754 0.964602 50.6 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 CTTCTCCTGATGGTTGGTCG TTACCATTCAACTATATCCGC 20 21 55.0 38.1 58.0 53.2 0.0 0.0 5.796361 27641 28223 471-755 0.964602 50.6 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 TTGCTTCTCCTGATGGTTGG TACCATTCAACTATATCCGC 20 20 50.0 40.0 57.8 52.3 0.0 0.0 5.928199 27641 28223 473-757 0.964602 50.6 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 CTTCTCCTGATGGTTGGTCG TTTACCATTCAACTATATCCGC 20 22 55.0 36.4 58.0 54.1 0.0 0.0 5.938371 27641 28223 472-756 0.964602 50.6 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 GATGGTTGGTCGGGTAACAA TACCATTCAACTATATCCGC 20 20 50.0 40.0 57.8 52.3 0.0 0.0 5.911239 27641 28223 462-746 0.902655 48.1 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 TTGACCCGTTGATCCTTTGG ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.100337 38344 39607 1280-2018 0.964602 89.8 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 TACCCTTCCGGTTCTGGATT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.043491 38344 39607 956-1606 0.823009 84.6 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 TACCCTTCCGGTTCTGGATT ACGCAGTCAACTCCATTTGT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.071549 38344 39607 1177-1825 0.778761 82.6 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 CCGGTTCTGGGCTTTTTACT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.098986 38344 39607 1139-1831 0.495575 71.0 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 TCCGGTTCTGGGCTTTTTAC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.104378 38344 39607 1140-1832 0.495575 71.0 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 ATCATATTCATAAAGCAGAAACA CCGAGAAAGTCTACGGTTCG 23 20 26.1 55.0 52.2 58.1 0.0 0.0 8.877702 43140 43803 587-877 1.000000 52.0 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCATATTCATAAAGCAGAAACAT CCGAGAAAGTCTACGGTTCG 23 20 26.1 55.0 52.2 58.1 0.0 0.0 8.877702 43140 43803 586-876 1.000000 52.0 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 CCCAGAAAATATCATATTCATAAAGCA CCGAGAAAGTCTACGGTTCG 27 20 29.6 55.0 56.4 58.1 0.0 0.0 8.754635 43140 43803 597-887 0.991150 51.6 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 ACCCAGAAAATATCATATTCATAAAGC CCGAGAAAGTCTACGGTTCG 27 20 29.6 55.0 56.4 58.1 0.0 0.0 8.756505 43140 43803 598-888 0.991150 51.6 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CCCAGAAAATATCATATTCATAAAGC CCGAGAAAGTCTACGGTTCG 26 20 30.8 55.0 54.9 58.1 0.0 0.0 9.216062 43140 43803 597-887 0.991150 51.6 rbcL-accD_p1 rbcL-accD 1 AATGAGGGACGTGATCTTGC TTGAACCCACAAATGCCTGT 20 20 50.0 45.0 58.0 58.2 0.0 0.0 0.242901 48986 49693 1310-1502 0.911504 86.5 rbcL-accD_p2 rbcL-accD 2 AATGAGGGACGTGATCTTGC ATAGGAGCCCAAGTACCTGG 20 20 50.0 55.0 58.0 58.2 0.0 3.3 0.222024 48986 49693 1467-1642 0.256637 60.5 rbcL-accD_p3 rbcL-accD 3 CGCTGGTACCGTAGTAGGTA ATAGGAGCCCAAGTACCTGG 20 20 55.0 55.0 58.0 58.2 7.6 3.3 0.238627 48986 49693 1780-1955 0.256637 60.4 rbcL-accD_p4 rbcL-accD 4 ACTACAATTCGGTGGAGGGA ATAGGAGCCCAAGTACCTGG 20 20 50.0 55.0 58.1 58.2 0.0 3.3 0.245202 48986 49693 1564-1739 0.256637 60.3 rbcL-accD_p5 rbcL-accD 5 GGGTCTCTCTACCAGGTGTT ATAGGAGCCCAAGTACCTGG 20 20 55.0 55.0 58.1 58.2 0.8 3.3 0.252206 48986 49693 1658-1833 0.256637 60.2 psbE-petL_p1 psbE-petL 1 AAAGGATCAAAACGGCCAGT AGAACGTGGGTCTCCAAAAC 20 20 45.0 50.0 58.0 58.0 2.2 0.0 0.041452 56543 57832 1380-2096 1.000000 91.7 psbE-petL_p2 psbE-petL 2 AAGGATCAAAACGGCCAGTT AGAACGTGGGTCTCCAAAAC 20 20 45.0 50.0 58.0 58.0 2.2 0.0 0.041452 56543 57832 1379-2095 1.000000 91.7 psbE-petL_p3 psbE-petL 3 ACGAGGGCTTCCAAAAACAT AGAACGTGGGTCTCCAAAAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.041452 56543 57832 1315-2031 1.000000 91.7 psbE-petL_p4 psbE-petL 4 AGGGCTTCCAAAAACATCGT AGAACGTGGGTCTCCAAAAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.041452 56543 57832 1312-2028 0.991150 91.3 psbE-petL_p5 psbE-petL 5 AGGGCTTCCAAAAACATCGT CCTACAGAGCGTGATTGCAT 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.059236 56543 57832 1272-1988 0.929204 88.7 clpP-psbB_p1 clpP-psbB 1 CGCACTATACGTCAACCCAA GAACAGAAAGCAAACGACCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.019669 64058 64536 600-674 0.955752 90.1 clpP-psbB_p2 clpP-psbB 2 CGCACTATACGTCAACCCAA CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.238244 64058 64536 553-627 0.982301 89.4 clpP-psbB_p3 clpP-psbB 3 CGCACTATACGTCAACCCAA CAAACGACCGGGATCATTCA 20 20 50.0 50.0 58.0 58.3 0.0 6.3 0.268011 64058 64536 590-664 0.982301 89.1 clpP-psbB_p4 clpP-psbB 4 CGTCAACCCAAGATGCATCT GAACAGAAAGCAAACGACCG 20 20 50.0 50.0 58.3 58.0 23.8 0.0 0.275956 64058 64536 591-665 0.973451 88.7 clpP-psbB_p5 clpP-psbB 5 TCCTCTCCAGGACTTCGAAA GAACAGAAAGCAAACGACCG 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.322939 64058 64536 571-645 0.964602 88.0 ycf1-ndhF_p1 ycf1-ndhF 1 ACAGGAACAAGAGGGATCCA GGTTACCTGATGCCATGGAG 20 20 50.0 55.0 58.0 58.0 15.2 18.4 0.071921 114088 115114 1873-2128 0.982301 90.7 ycf1-ndhF_p2 ycf1-ndhF 2 ACAGGAACAAGAGGGATCCA GTTACCTGATGCCATGGAGG 20 20 50.0 55.0 58.0 58.0 15.2 18.4 0.071921 114088 115114 1872-2127 0.982301 90.7 ycf1-ndhF_p3 ycf1-ndhF 3 AAGAGGGATCCACCGAAGAA GTTACCTGATGCCATGGAGG 20 20 50.0 55.0 58.0 58.0 15.2 18.4 0.074506 114088 115114 1864-2119 0.982301 90.7 ycf1-ndhF_p4 ycf1-ndhF 4 ACAGGAACAAGAGGGATCCA ACCTATTGCGTCGAATGCTT 20 20 50.0 45.0 58.0 58.0 15.2 11.7 0.068968 114088 115114 2115-2370 0.955752 89.7 ycf1-ndhF_p5 ycf1-ndhF 5 AAGAGGGATCCACCGAAGAA ACCTATTGCGTCGAATGCTT 20 20 50.0 45.0 58.0 58.0 15.2 11.7 0.071554 114088 115114 2107-2362 0.955752 89.7 ndhF-rpl32_p1 ndhF-rpl32 1 AAGCATTCGACGCAATAGGT TGCCCAATACCCTTTGCTTT 20 20 45.0 45.0 58.0 58.0 8.6 0.0 0.046893 116315 117295 988-1626 0.769912 82.4 ndhF-rpl32_p2 ndhF-rpl32 2 AAGCATTCGACGCAATAGGT TGTTTAGGGTCGATGGGGAT 20 20 45.0 50.0 58.0 58.1 8.6 0.0 0.136378 116315 117295 1401-2051 0.752212 81.0 ndhF-rpl32_p3 ndhF-rpl32 3 ACCACACATGAAGCGGAAAT TGCCCAATACCCTTTGCTTT 20 20 45.0 45.0 58.1 58.0 0.0 0.0 0.113018 116315 117295 1213-1851 0.725664 80.1 ndhF-rpl32_p4 ndhF-rpl32 4 TTTTGACAAGCATTCGACGC TGTTTAGGGTCGATGGGGAT 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.143240 116315 117295 1408-2058 0.725664 79.9 ndhF-rpl32_p5 ndhF-rpl32 5 TTTTGACAAGCATTCGACGC TGCCCAATACCCTTTGCTTT 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.053754 116315 117295 995-1633 0.646018 77.4 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AAAGCAAAGGGTATTGGGCA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.030548 117455 118574 761-1311 0.884956 87.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AAAGCAAAGGGTATTGGGCA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.031919 117455 118574 762-1312 0.884956 87.1 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AAAGCAAAGGGTATTGGGCA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.146995 117455 118574 771-1321 0.884956 86.2 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 CGGCGAAAATAGACAATGCC AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.113153 117455 118574 1100-1661 0.787611 82.6 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 CGGCGAAAATAGACAATGCC CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.114524 117455 118574 1101-1662 0.787611 82.6 ycf1_p1 ycf1 1 GGTGCCAAGGTTTAAGACGA ATCCTCCGGATGGGAATCAA 20 20 50.0 50.0 58.1 58.2 0.0 15.9 0.293361 131982 132101 1482-1551 0.964602 88.2 ycf1_p2 ycf1 2 TCGGTGCCAAGGTTTAAGAC ATCCTCCGGATGGGAATCAA 20 20 50.0 50.0 58.1 58.2 0.0 15.9 0.293361 131982 132101 1484-1553 0.929204 86.8 ycf1_p3 ycf1 3 TCTTTGAGGGCGCATAGAAC ATCCTCCGGATGGGAATCAA 20 20 50.0 50.0 58.0 58.2 10.8 15.9 0.204423 131982 132101 920-989 0.893805 86.1 ycf1_p4 ycf1 4 GTCTTTGAGGGCGCATAGAA ATCCTCCGGATGGGAATCAA 20 20 50.0 50.0 58.0 58.2 10.8 15.9 0.204423 131982 132101 921-990 0.884956 85.8 ycf1_p5 ycf1 5 ATCCTCGGACCATTCAGGAA ATCCTCCGGATGGGAATCAA 20 20 50.0 50.0 58.1 58.2 3.3 15.9 0.300673 131982 132101 1388-1400 0.115044 50.9