primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 87 456 427-439 1.000000 90.4 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG CGGTCGAGGCTCCATCTATA 20 20 55.0 55.0 58.1 58.2 0.0 9.3 0.306414 87 456 408-420 1.000000 89.5 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 GATCCACTTGGCTACATCCG CCGTGCTAACCTTGGTATGG 20 20 55.0 55.0 58.1 58.3 0.0 0.0 0.465225 87 456 476-488 1.000000 88.3 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 GATCCACTTGGCTACATCCG ACCGTGCTAACCTTGGTATG 20 20 55.0 50.0 58.1 57.6 0.0 0.0 0.525510 87 456 477-489 1.000000 87.8 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GCCTTGATCCACTTGGCTAC TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.6 57.9 0.0 0.0 0.691206 87 456 432-444 1.000000 86.5 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AACGATGTCGAGTCAAGAGC CGAAAACTTACAGCGGCTTG 20 20 50.0 50.0 58.0 58.0 9.7 0.0 0.065556 6259 6958 1468-1583 1.000000 91.5 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AACGATGTCGAGTCAAGAGC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 9.7 16.9 0.092129 6259 6958 802-877 1.000000 91.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AACGATGTCGAGTCAAGAGC ATCGAAAACTTACAGCGGCT 20 20 50.0 45.0 58.0 57.9 9.7 0.0 0.110790 6259 6958 1470-1585 1.000000 91.1 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AACGATGTCGAGTCAAGAGC TCGAAAACTTACAGCGGCTT 20 20 50.0 45.0 58.0 58.1 9.7 0.0 0.142330 6259 6958 1469-1584 1.000000 90.9 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTTTTCTCCTCGTACGGC CGAAAACTTACAGCGGCTTG 20 20 50.0 50.0 57.9 58.0 16.5 0.0 0.125507 6259 6958 2080-2193 1.000000 90.7 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 TCCACTCAGCCATCTCTCC TACCACTAAACTATACCCGC 19 20 57.9 45.0 58.1 54.0 0.0 0.0 5.103373 8455 9062 634-811 1.000000 52.0 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 TCCACTCAGCCATCTCTCC TTACCACTAAACTATACCCGC 19 21 57.9 42.9 58.1 54.9 0.0 0.0 5.239633 8455 9062 635-812 1.000000 52.0 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 TCCACTCAGCCATCTCTCC TTTACCACTAAACTATACCCGC 19 22 57.9 40.9 58.1 55.6 0.0 0.0 5.453521 8455 9062 636-813 1.000000 52.0 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 TCCACTCAGCCATCTCTCC CTTTTACCACTAAACTATACCCGC 19 24 57.9 41.7 58.1 57.4 0.0 0.0 5.686581 8455 9062 638-815 1.000000 52.0 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 TCCACTCAGCCATCTCTCC TTTTACCACTAAACTATACCCGC 19 23 57.9 39.1 58.1 56.4 0.0 0.0 5.735021 8455 9062 637-814 1.000000 52.0 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 CCCGCTACCCGCTTATATTC TGAGTTGCTCAAACAGTCCC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.038652 10137 10530 992-1036 1.000000 91.4 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 CCCGCTACCCGCTTATATTC GAGTTGCTCAAACAGTCCCA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.038652 10137 10530 991-1035 1.000000 91.3 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 AGCCTTCCAAGCTAACGATG TGAGTTGCTCAAACAGTCCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.062520 10137 10530 1023-1067 1.000000 91.0 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 AGCCTTCCAAGCTAACGATG GAGTTGCTCAAACAGTCCCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.062520 10137 10530 1022-1066 1.000000 90.9 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 CCCGCTACCCGCTTATATTC CGAAGCTTATCCGGGAGATG 20 20 55.0 55.0 58.0 57.9 0.0 0.0 0.077659 10137 10530 1394-1438 1.000000 89.3 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CAACCACTCAGCCATCTCTC CTTGAGGTCACGGGTTCAAA 20 20 55.0 50.0 58.0 58.0 0.0 4.2 0.059562 37896 38367 1299-1401 1.000000 90.7 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 CAACCACTCAGCCATCTCTC CTTGTGTTTATCGCGGGGTA 20 20 55.0 50.0 58.0 58.0 0.0 6.1 0.034292 37896 38367 1350-1408 0.875000 81.9 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 CAACCACTCAGCCATCTCTC TTGTGTTTATCGCGGGGTAG 20 20 55.0 50.0 58.0 58.0 0.0 6.1 0.034292 37896 38367 1349-1407 0.875000 81.9 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 CAACCACTCAGCCATCTCTC CGATCATAGGAGGGTCCCTT 20 20 55.0 55.0 58.0 58.0 0.0 13.1 0.038260 37896 38367 1458-1516 0.875000 81.8 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 CAACCACTCAGCCATCTCTC CGTTGTTTTTCGACCGGAAG 20 20 55.0 50.0 58.0 58.0 0.0 9.5 0.034641 37896 38367 1622-1680 0.875000 81.5 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 48251 49119 889-1051 1.000000 89.7 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 48251 49119 897-1059 1.000000 89.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 48251 49119 921-1083 1.000000 88.6 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 48251 49119 929-1091 1.000000 88.0 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 48251 49119 903-1065 1.000000 87.7 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 ACTCGATATTATTAGAAATGCCCA GTTCGAGTCCGTATAGCCCT 24 20 33.3 55.0 55.8 58.7 0.0 0.0 6.881539 52647 53207 519-651 1.000000 50.9 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 ACTCGATATTATTAGAAATGCCCA AGAAGGTCTACGGTTCGAGT 24 20 33.3 50.0 55.8 57.8 0.0 0.0 6.395473 52647 53207 531-663 1.000000 50.8 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ACTCGATATTATTAGAAATGCCCAA AGAAGGTCTACGGTTCGAGT 25 20 32.0 50.0 56.5 57.8 0.0 0.0 6.729726 52647 53207 531-663 1.000000 50.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 ACTCGATATTATTAGAAATGCCCA GAAGGTCTACGGTTCGAGTC 24 20 33.3 55.0 55.8 57.5 0.0 0.0 6.739245 52647 53207 530-662 1.000000 50.8 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 ACTCGATATTATTAGAAATGCCCA AAGGTCTACGGTTCGAGTCC 24 20 33.3 55.0 55.8 58.8 0.0 0.0 7.026015 52647 53207 529-661 1.000000 50.8 rbcL-accD_p1 rbcL-accD 1 AGTCCTGAATTAGCTGCTGC CTCCCTGTTAGACAACGTCG 20 20 50.0 55.0 58.0 58.0 13.4 0.0 0.056988 58491 59316 819-949 0.875000 81.4 rbcL-accD_p2 rbcL-accD 2 ATGAAATTATCCGTGCGGCT CTCCCTGTTAGACAACGTCG 20 20 45.0 55.0 58.0 58.0 5.6 0.0 0.054140 58491 59316 848-978 0.875000 81.3 rbcL-accD_p3 rbcL-accD 3 ATGAAATTATCCGTGCGGCT GAAATTCCGAATGTCCCCGA 20 20 45.0 50.0 58.0 58.0 5.6 0.2 0.065362 58491 59316 1025-1155 0.875000 81.1 rbcL-accD_p4 rbcL-accD 4 AGTCCTGAATTAGCTGCTGC TCTTCGCATTGAACCCACAA 20 20 50.0 45.0 58.0 58.0 13.4 0.0 0.061265 58491 59316 1466-1575 0.875000 80.8 rbcL-accD_p5 rbcL-accD 5 ATGAAATTATCCGTGCGGCT TCTTCGCATTGAACCCACAA 20 20 45.0 45.0 58.0 58.0 5.6 0.0 0.058416 58491 59316 1495-1604 0.875000 80.7 accD_p1 accD 1 TCTTTTCATGCCGTGTTGGA CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 58.0 58.0 0.0 26.9 0.052738 59317 60837 2508-2792 0.875000 81.5 accD_p2 accD 2 TCTTTTCATGCCGTGTTGGA AAGGAAGCCATTGCAATTGC 20 20 45.0 45.0 58.0 57.9 0.0 24.1 0.129272 59317 60837 2515-2799 0.875000 80.9 accD_p3 accD 3 TCTTTTCATGCCGTGTTGGA TCTTGCCTAATTTCGCGGAA 20 20 45.0 45.0 58.0 57.9 0.0 0.3 0.127805 59317 60837 2162-2230 0.750000 72.9 accD_p4 accD 4 TCTTTTCATGCCGTGTTGGA TGCCTAATTTCGCGGAAGAA 20 20 45.0 45.0 58.0 57.9 0.0 5.8 0.127805 59317 60837 2159-2227 0.750000 72.9 accD_p5 accD 5 TCTTTTCATGCCGTGTTGGA TTGCCTAATTTCGCGGAAGA 20 20 45.0 45.0 58.0 57.9 0.0 5.8 0.127805 59317 60837 2160-2228 0.750000 72.9 clpP_p1 clpP 1 CTGAACGAGTCGCACATACA TACGCTTCCGCATCAAAGAA 20 20 50.0 45.0 58.0 57.9 13.6 0.0 0.110313 71953 74134 2533-2571 0.875000 80.2 clpP_p2 clpP 2 CTGAACGAGTCGCACATACA TTACGCTTCCGCATCAAAGA 20 20 50.0 45.0 58.0 57.9 13.6 0.0 0.110313 71953 74134 2534-2572 0.875000 80.2 clpP_p3 clpP 3 TGACCCTGTTAGTCCGTTCT TACGCTTCCGCATCAAAGAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.092871 71953 74134 2863-2901 0.875000 80.0 clpP_p4 clpP 4 TGACCCTGTTAGTCCGTTCT TTACGCTTCCGCATCAAAGA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.092871 71953 74134 2864-2902 0.875000 80.0 clpP_p5 clpP 5 TGACCCTGTTAGTCCGTTCT CATTGTTACGCTTCCGCATC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.096522 71953 74134 2869-2907 0.875000 79.9 rps3-rps19_p1 rps3-rps19 1 AGTCTCAAAACGAGCGGATC TAGTCACTTGGTCCAGAGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.012012 85816 86383 777-792 0.875000 80.5 rps3-rps19_p2 rps3-rps19 2 GTCTCAAAACGAGCGGATCT TAGTCACTTGGTCCAGAGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.012012 85816 86383 776-791 0.875000 80.5 rps3-rps19_p3 rps3-rps19 3 AGTCTCAAAACGAGCGGATC AACCCTGTAGACCATCCACA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.041194 85816 86383 1118-1133 0.875000 79.2 rps3-rps19_p4 rps3-rps19 4 GTCTCAAAACGAGCGGATCT AACCCTGTAGACCATCCACA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.041194 85816 86383 1117-1132 0.875000 79.2 rps3-rps19_p5 rps3-rps19 5 GTCTCAAAACGAGCGGATCT CCGGATCGAAATGTTGGCTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.054227 85816 86383 1170-1185 0.875000 78.9 ycf1_p1 ycf1 1 GAGCTACTGAGGAACAACGG TATGTAGGAGGTGGCCGAAT 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.099441 111332 112315 1161-1616 1.000000 91.2 ycf1_p2 ycf1 2 GAGCTACTGAGGAACAACGG ACTTTCTTCGTTGGCACCAT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.021074 111332 112315 1620-2084 0.875000 86.8 ycf1_p3 ycf1 3 TAACTCGCGGAACTTCTTCG ACTTTCTTCGTTGGCACCAT 20 20 50.0 45.0 58.0 58.0 6.1 0.0 0.045605 111332 112315 1871-1994 0.750000 78.0 ycf1_p4 ycf1 4 GTATCCCGGACCTACACTGA ACTTTCTTCGTTGGCACCAT 20 20 55.0 45.0 57.9 58.0 0.7 0.0 0.081714 111332 112315 2262-2317 0.500000 65.1 ycf1_p5 ycf1 5 AGTATCCCGGACCTACACTG ACTTTCTTCGTTGGCACCAT 20 20 55.0 45.0 57.9 58.0 0.7 0.0 0.087578 111332 112315 2263-2318 0.500000 65.0 ycf1-ndhF_p1 ycf1-ndhF 1 GATATCCGCCGAAGAAGACC ACTTTCTTCGTTGGCACCAT 20 20 55.0 45.0 57.9 58.0 0.0 0.0 0.086157 112316 112386 804-804 0.250000 49.3 ycf1-ndhF_p2 ycf1-ndhF 2 AGCGGTCAAATTGAGAAGCA ACTTTCTTCGTTGGCACCAT 20 20 45.0 45.0 58.1 58.0 15.8 0.0 0.122524 112316 112386 836-836 0.250000 49.0 ycf1-ndhF_p3 ycf1-ndhF 3 GATATCCGCCGAAGAAGACC AATATGTAGGAGGTGGCCGA 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.164524 112316 112386 338-338 0.250000 48.7 ycf1-ndhF_p4 ycf1-ndhF 4 GATATCCGCCGAAGAAGACC ATATGTAGGAGGTGGCCGAA 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.164524 112316 112386 337-337 0.250000 48.7 ycf1-ndhF_p5 ycf1-ndhF 5 GATATCCGCCGAAGAAGACC TATGTAGGAGGTGGCCGAAT 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.164524 112316 112386 336-336 0.250000 48.7 ndhF-rpl32_p1 ndhF-rpl32 1 TAGGGCGTGTGAACCAAAAA TTCCATGCTGCCCAATATCC 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.054584 114639 115659 1618-1636 0.625000 73.6 ndhF-rpl32_p2 ndhF-rpl32 2 TAGGGCGTGTGAACCAAAAA CATGCTGCCCAATATCCCTT 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.059602 114639 115659 1615-1633 0.625000 73.5 ndhF-rpl32_p3 ndhF-rpl32 3 GAAACTGCCCGTTATCCGAT TTCCATGCTGCCCAATATCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.050886 114639 115659 1719-1719 0.250000 49.6 ndhF-rpl32_p4 ndhF-rpl32 4 GAAACTGCCCGTTATCCGAT CATGCTGCCCAATATCCCTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.055905 114639 115659 1716-1716 0.250000 49.6 ndhF-rpl32_p5 ndhF-rpl32 5 GAAACTGCCCGTTATCCGAT GGTGGAGACCTTGTTGTGTT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.103317 114639 115659 1932-1932 0.250000 49.2 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGGGTTGGGTTCGTAAACTT ACTCGGTGCGATTATTGTCC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.078594 115831 116188 1335-1360 0.875000 79.9 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGATATTGGGCAGCATGGAA ACTCGGTGCGATTATTGTCC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.064419 115831 116188 973-973 0.250000 49.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AAGGGATATTGGGCAGCATG ACTCGGTGCGATTATTGTCC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.069438 115831 116188 976-976 0.250000 49.4 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGATATTGGGCAGCATGGAA GCTGCATAGCCCAATACCAT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.085211 115831 116188 1104-1104 0.250000 49.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AAGGGATATTGGGCAGCATG GCTGCATAGCCCAATACCAT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.090229 115831 116188 1107-1107 0.250000 49.3 ndhG-ndhI_p1 ndhG-ndhI 1 GTGCTGCAGCTACAAAATGG AATCAAATTGCTTTGGGCCG 20 20 50.0 45.0 58.0 57.9 36.6 0.0 0.110982 120760 121167 675-766 0.875000 86.1 ndhG-ndhI_p2 ndhG-ndhI 2 GATTTCTTACTGGCGAGCCA AATCAAATTGCTTTGGGCCG 20 20 50.0 45.0 58.0 57.9 16.7 0.0 0.121855 120760 121167 1028-1119 0.875000 83.2 ndhG-ndhI_p3 ndhG-ndhI 3 GTGCTGCAGCTACAAAATGG TGCCTAGGCTACGGATAGAC 20 20 50.0 55.0 58.0 58.1 36.6 33.1 0.106312 120760 121167 1277-1356 0.875000 78.7 ndhG-ndhI_p4 ndhG-ndhI 4 AAGACCCGATCCCAGAAAGA TGCCTAGGCTACGGATAGAC 20 20 50.0 55.0 58.0 58.1 0.0 33.1 0.140389 120760 121167 1150-1229 0.875000 78.7 ndhG-ndhI_p5 ndhG-ndhI 5 GATTTCTTACTGGCGAGCCA TGCCTAGGCTACGGATAGAC 20 20 50.0 55.0 58.0 58.1 16.7 33.1 0.117186 120760 121167 1630-1709 0.750000 71.8 ycf2-trnI-CAU_p1 ycf2-trnI-CAU 1 AATCATGGTCCTTGCGGATC GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 58.0 58.0 0.0 7.6 0.036329 154120 154426 906-1135 1.000000 91.7 ycf2-trnI-CAU_p2 ycf2-trnI-CAU 2 AATCATGGTCCTTGCGGATC ACCGGGAGTCGATGACTATT 20 20 50.0 50.0 58.0 57.9 0.0 6.3 0.095962 154120 154426 1303-1517 1.000000 90.6 ycf2-trnI-CAU_p3 ycf2-trnI-CAU 3 AATCATGGTCCTTGCGGATC AGAAGAGTTCGACCCAATGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.127733 154120 154426 1260-1474 1.000000 90.6 ycf2-trnI-CAU_p4 ycf2-trnI-CAU 4 AATCATGGTCCTTGCGGATC GAAGAGTTCGACCCAATGCT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.127733 154120 154426 1259-1473 1.000000 90.6 ycf2-trnI-CAU_p5 ycf2-trnI-CAU 5 AATCATGGTCCTTGCGGATC GACTGTCTACGGCTCCATTG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.099233 154120 154426 1491-1802 1.000000 90.3