primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score tRNA-Gln-tRNA-Ser_p1 tRNA-Gln-tRNA-Ser 1 GATCAAAACCCGCTGCCTTA GGGTTCGAATCCCTCTCTCT 20 20 50.0 55.0 58.5 58.2 0.0 17.2 0.757478 7825 9017 1251-1272 1.000000 78.9 tRNA-Gln-tRNA-Ser_p2 tRNA-Gln-tRNA-Ser 2 GATCAAAACCCGCTGCCTTA TAACGCGTCGGATTGCTAAT 20 20 50.0 45.0 58.5 57.8 0.0 14.4 0.753419 7825 9017 1296-1317 1.000000 78.8 tRNA-Gln-tRNA-Ser_p3 tRNA-Gln-tRNA-Ser 3 GATCAAAACCCGCTGCCTTA CTAACGCGTCGGATTGCTAA 20 20 50.0 50.0 58.5 58.4 0.0 14.4 0.988324 7825 9017 1297-1318 1.000000 76.9 tRNA-Gln-tRNA-Ser_p4 tRNA-Gln-tRNA-Ser 4 GATCAAAACCCGCTGCCTTA TTTTGCTTGGAGAGATGGCC 20 20 50.0 50.0 58.5 58.5 0.0 0.0 0.991346 7825 9017 1324-1345 1.000000 76.7 tRNA-Gln-tRNA-Ser_p5 tRNA-Gln-tRNA-Ser 5 CGAATGACGGGATCAAAACC TAACGCGTCGGATTGCTAAT 20 20 50.0 45.0 57.2 57.8 0.0 14.4 1.037955 7825 9017 1306-1327 1.000000 76.4 tRNA-Gly-tRNA-Gly_p1 tRNA-Gly-tRNA-Gly 1 TTGTGGCGGGTATGGTTTAG CCCGCATCATTAGCTTGGAA 20 20 50.0 50.0 57.9 58.3 0.0 0.0 0.437688 9930 10784 910-932 1.000000 81.0 tRNA-Gly-tRNA-Gly_p2 tRNA-Gly-tRNA-Gly 2 TTAGACAGAGGACCCGTCTG CCCGCATCATTAGCTTGGAA 20 20 55.0 50.0 58.2 58.3 15.7 0.0 0.485367 9930 10784 945-967 1.000000 80.5 tRNA-Gly-tRNA-Gly_p3 tRNA-Gly-tRNA-Gly 3 AGAGGACCCGTCTGTGTAAT CCCGCATCATTAGCTTGGAA 20 20 50.0 50.0 57.8 58.3 0.0 0.0 0.554166 9930 10784 939-961 1.000000 80.0 tRNA-Gly-tRNA-Gly_p4 tRNA-Gly-tRNA-Gly 4 TTGTGGCGGGTATGGTTTAG ATCGAACCCGCATCATTAGC 20 20 50.0 50.0 57.9 58.5 0.0 0.0 0.603901 9930 10784 916-938 1.000000 79.7 tRNA-Gly-tRNA-Gly_p5 tRNA-Gly-tRNA-Gly 5 TTAGACAGAGGACCCGTCTG ATCGAACCCGCATCATTAGC 20 20 55.0 50.0 58.2 58.5 15.7 0.0 0.651580 9930 10784 951-973 1.000000 79.1 tRNA-Arg-tRNA-Asp_p1 tRNA-Arg-tRNA-Asp 1 AAACAAAATCCACCGACGGA AATCCAGAAACTCGACGAGC 20 20 45.0 50.0 58.0 58.0 23.4 24.4 0.032239 27991 28140 435-447 0.600000 70.7 tRNA-Arg-tRNA-Asp_p2 tRNA-Arg-tRNA-Asp 2 AAACAAAATCCACCGACGGA CAGAAACTCGACGAGCAGAA 20 20 45.0 50.0 58.0 57.9 23.4 24.4 0.081787 27991 28140 431-443 0.600000 70.3 tRNA-Arg-tRNA-Asp_p3 tRNA-Arg-tRNA-Asp 3 AGTTCTGGTAGTACAGGCGT AATCCAGAAACTCGACGAGC 20 20 50.0 50.0 58.1 58.0 2.1 24.4 0.081721 27991 28140 678-692 0.600000 68.7 tRNA-Arg-tRNA-Asp_p4 tRNA-Arg-tRNA-Asp 4 CCTTGTGAATCCATCCAGGG AATCCAGAAACTCGACGAGC 20 20 55.0 50.0 57.9 58.0 0.0 24.4 0.065301 27991 28140 966-980 0.600000 67.8 tRNA-Arg-tRNA-Asp_p5 tRNA-Arg-tRNA-Asp 5 CTTGTGAATCCATCCAGGGG AATCCAGAAACTCGACGAGC 20 20 55.0 50.0 57.9 58.0 0.0 24.4 0.065301 27991 28140 965-979 0.600000 67.8 tRNA-Tyr-tRNA-Glu_p1 tRNA-Tyr-tRNA-Glu 1 GTCCCCATTAACCACTCGAG CGTCTAGAGGCCTAGGACAA 20 20 55.0 55.0 57.7 57.9 11.8 19.5 0.365356 28877 29055 269-273 1.000000 84.5 tRNA-Tyr-tRNA-Glu_p2 tRNA-Tyr-tRNA-Glu 2 CCCATTAACCACTCGAGCAT CGTCTAGAGGCCTAGGACAA 20 20 50.0 55.0 57.7 57.9 13.6 19.5 0.386295 28877 29055 266-270 1.000000 84.4 tRNA-Tyr-tRNA-Glu_p3 tRNA-Tyr-tRNA-Glu 3 GTCCCCATTAACCACTCGAG GAGGCCTAGGACAACTCTCT 20 20 55.0 55.0 57.7 57.8 11.8 19.5 0.464158 28877 29055 263-267 1.000000 83.9 tRNA-Tyr-tRNA-Glu_p4 tRNA-Tyr-tRNA-Glu 4 GTCCCCATTAACCACTCGAG AGAGGCCTAGGACAACTCTC 20 20 55.0 55.0 57.7 57.8 11.8 19.5 0.464158 28877 29055 264-268 1.000000 83.8 tRNA-Tyr-tRNA-Glu_p5 tRNA-Tyr-tRNA-Glu 5 CCCATTAACCACTCGAGCAT GAGGCCTAGGACAACTCTCT 20 20 50.0 55.0 57.7 57.8 13.6 19.5 0.485097 28877 29055 260-264 1.000000 83.8 tRNA-Glu-tRNA-Cys_p1 tRNA-Glu-tRNA-Cys 1 TTGTCCTAGGCCTCTAGACG CCTTGATTCCCCAGTTCGAG 20 20 55.0 55.0 57.9 58.0 9.7 0.0 0.084070 29129 30535 1462-1474 1.000000 84.5 tRNA-Glu-tRNA-Cys_p2 tRNA-Glu-tRNA-Cys 2 TTGTCCTAGGCCTCTAGACG TGATTCCCCAGTTCGAGTCT 20 20 55.0 50.0 57.9 58.1 9.7 0.0 0.115647 29129 30535 1459-1471 1.000000 84.3 tRNA-Glu-tRNA-Cys_p3 tRNA-Glu-tRNA-Cys 3 AGAGAGTTGTCCTAGGCCTC CCTTGATTCCCCAGTTCGAG 20 20 55.0 55.0 57.8 58.0 9.7 0.0 0.182872 29129 30535 1468-1480 1.000000 83.7 tRNA-Glu-tRNA-Cys_p4 tRNA-Glu-tRNA-Cys 4 GAGAGTTGTCCTAGGCCTCT CCTTGATTCCCCAGTTCGAG 20 20 55.0 55.0 57.8 58.0 9.7 0.0 0.182872 29129 30535 1467-1479 1.000000 83.7 tRNA-Glu-tRNA-Cys_p5 tRNA-Glu-tRNA-Cys 5 GAGAGTTGTCCTAGGCCTCT TGATTCCCCAGTTCGAGTCT 20 20 55.0 50.0 57.8 58.1 9.7 0.0 0.214449 29129 30535 1464-1476 1.000000 83.4 tRNA-Cys-tRNA-Gly_p1 tRNA-Cys-tRNA-Gly 1 CTCGAACTGGGGAATCAAGG GTTCGATTCCCGCTATCCG 20 19 55.0 57.9 58.0 58.2 0.0 0.0 1.219352 30608 30896 360-368 1.000000 80.7 tRNA-Cys-tRNA-Gly_p2 tRNA-Cys-tRNA-Gly 2 CTCGAACTGGGGAATCAAGG GGGTTCGATTCCCGCTATC 20 19 55.0 57.9 58.0 57.8 0.0 9.9 1.242288 30608 30896 362-370 1.000000 80.5 tRNA-Cys-tRNA-Gly_p3 tRNA-Cys-tRNA-Gly 3 CTCGAACTGGGGAATCAAGG GGTTCGATTCCCGCTATCC 20 19 55.0 57.9 58.0 57.8 0.0 0.0 1.242288 30608 30896 361-369 1.000000 80.5 tRNA-Cys-tRNA-Gly_p4 tRNA-Cys-tRNA-Gly 4 AGACTCGAACTGGGGAATCA GTTCGATTCCCGCTATCCG 20 19 50.0 57.9 58.1 58.2 0.0 0.0 1.250930 30608 30896 363-371 1.000000 80.4 tRNA-Cys-tRNA-Gly_p5 tRNA-Cys-tRNA-Gly 5 TTTAGTAGGCGACACCCAGA GTTCGATTCCCGCTATCCG 20 19 50.0 57.9 58.1 58.2 0.0 0.0 1.262027 30608 30896 380-388 1.000000 79.9 tRNA-Thr-tRNA-Met_p1 tRNA-Thr-tRNA-Met 1 GAACCGATGACTTACGCCTT GTTCAAATCCTGTCTCCGCA 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.197560 36565 36723 235-367 1.000000 84.1 tRNA-Thr-tRNA-Met_p2 tRNA-Thr-tRNA-Met 2 GAACCGATGACTTACGCCTT TAGCTCGCAAGGCTCATAAC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.231039 36565 36723 268-400 1.000000 83.3 tRNA-Thr-tRNA-Met_p3 tRNA-Thr-tRNA-Met 3 GAACCGATGACTTACGCCTT TATCGATTACGCGGGGTAGA 20 20 50.0 50.0 58.0 57.8 0.0 12.5 0.189449 36565 36723 297-429 1.000000 83.2 tRNA-Thr-tRNA-Met_p4 tRNA-Thr-tRNA-Met 4 GAACCGATGACTTACGCCTT GTAGCTCGCAAGGCTCATAA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.231039 36565 36723 269-401 1.000000 83.2 tRNA-Thr-tRNA-Met_p5 tRNA-Thr-tRNA-Met 5 GAACCGATGACTTACGCCTT GTATCGATTACGCGGGGTAG 20 20 50.0 55.0 58.0 57.7 0.0 12.5 0.259363 36565 36723 298-430 1.000000 82.6 tRNA-Ser-tRNA-Leu_p1 tRNA-Ser-tRNA-Leu 1 CGAGGGGTTTAAGGTGTAGC CTGAATCTGGGAGCTGTCAC 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.041303 44853 46444 1751-1764 1.000000 85.3 tRNA-Ser-tRNA-Leu_p2 tRNA-Ser-tRNA-Leu 2 CGAGGGGTTTAAGGTGTAGC TCGATCCGATTGAGTCCGTA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.062279 44853 46444 1708-1721 1.000000 85.3 tRNA-Ser-tRNA-Leu_p3 tRNA-Ser-tRNA-Leu 3 CGAGGGGTTTAAGGTGTAGC GATCCGATTGAGTCCGTAGC 20 20 55.0 55.0 58.0 57.9 0.0 0.0 0.073230 44853 46444 1706-1719 1.000000 85.2 tRNA-Ser-tRNA-Leu_p4 tRNA-Ser-tRNA-Leu 4 GCTGTTTACCGAGGGTTCAA CTGAATCTGGGAGCTGTCAC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.134469 44853 46444 1710-1723 1.000000 84.7 tRNA-Ser-tRNA-Leu_p5 tRNA-Ser-tRNA-Leu 5 CGAGGGGTTTAAGGTGTAGC GTCCGTAGCGTCTACCATTC 20 20 55.0 55.0 58.0 57.9 0.0 10.2 0.136735 44853 46444 1695-1708 1.000000 84.7 tRNA-Leu-tRNA-Phe_p1 tRNA-Leu-tRNA-Phe 1 GCGAGCGTAACAATGCAAAT GACTTGAACTGGTGACACGA 20 20 45.0 50.0 58.1 57.8 0.0 0.0 0.323902 47033 47399 507-515 1.000000 83.2 tRNA-Leu-tRNA-Phe_p2 tRNA-Leu-tRNA-Phe 2 GCGAGCGTAACAATGCAAAT ACTTGAACTGGTGACACGAG 20 20 45.0 50.0 58.1 57.8 0.0 15.3 0.330017 47033 47399 506-514 1.000000 83.2 tRNA-Leu-tRNA-Phe_p3 tRNA-Leu-tRNA-Phe 3 GCGAGCGTAACAATGCAAAT AGACTTGAACTGGTGACACG 20 20 45.0 50.0 58.1 57.8 0.0 0.0 0.330017 47033 47399 508-516 1.000000 83.1 tRNA-Leu-tRNA-Phe_p4 tRNA-Leu-tRNA-Phe 4 GCGAGCGTAACAATGCAAAT GAACTGGTGACACGAGGATT 20 20 45.0 50.0 58.1 57.5 0.0 20.1 0.562315 47033 47399 502-510 1.000000 81.4 tRNA-Leu-tRNA-Phe_p5 tRNA-Leu-tRNA-Phe 5 GCGAGCGTAACAATGCAAAT CTTGAACTGGTGACACGAGG 20 20 45.0 55.0 58.1 58.5 0.0 20.1 0.602718 47033 47399 505-513 1.000000 81.0 tRNA-Val-tRNA-Met_p1 tRNA-Val-tRNA-Met 1 CGTGTAAACGAGGTGCTCTA CGAAACTCTAACCGCTGAGT 20 20 50.0 50.0 57.4 57.7 0.0 0.0 0.973613 50528 50737 263-277 1.000000 82.7 tRNA-Val-tRNA-Met_p2 tRNA-Val-tRNA-Met 2 CGTGTAAACGAGGTGCTCTA TTCGAACCAATGACTCTCGC 20 20 50.0 50.0 57.4 58.3 0.0 0.0 0.914303 50528 50737 293-307 1.000000 82.5 tRNA-Val-tRNA-Met_p3 tRNA-Val-tRNA-Met 3 CGTGTAAACGAGGTGCTCTA GCCGTATGAAAGCGAAACTC 20 20 50.0 50.0 57.4 57.6 0.0 0.0 1.061624 50528 50737 275-289 1.000000 81.7 tRNA-Val-tRNA-Met_p4 tRNA-Val-tRNA-Met 4 CGTGTAAACGAGGTGCTCTA GAAAGCGAAACTCTAACCGC 20 20 50.0 50.0 57.4 57.5 0.0 0.0 1.129924 50528 50737 268-282 1.000000 81.3 tRNA-Val-tRNA-Met_p5 tRNA-Val-tRNA-Met 5 CGTGTAAACGAGGTGCTCTA CAATGACTCTCGCCGTATGA 20 20 50.0 50.0 57.4 57.5 0.0 0.0 1.116335 50528 50737 286-300 1.000000 81.0 tRNA-Trp-tRNA-Pro_p1 tRNA-Trp-tRNA-Pro 1 ACCTACGACATCGGGTTTTG CGCGTTTGTTTTGGGTACAA 20 20 50.0 45.0 57.9 57.8 6.2 0.0 0.279274 63306 63471 268-278 1.000000 85.1 tRNA-Trp-tRNA-Pro_p2 tRNA-Trp-tRNA-Pro 2 AAACACGCCCTGTAGGATTC CGCGTTTGTTTTGGGTACAA 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.299750 63306 63471 290-300 1.000000 84.4 tRNA-Trp-tRNA-Pro_p3 tRNA-Trp-tRNA-Pro 3 ACCTACGACATCGGGTTTTG AGGTTCAAATCCCGTCATCC 20 20 50.0 50.0 57.9 57.6 6.2 0.0 0.509008 63306 63471 240-250 1.000000 84.1 tRNA-Trp-tRNA-Pro_p4 tRNA-Trp-tRNA-Pro 4 ACCTACGACATCGGGTTTTG GTTCAAATCCCGTCATCCCT 20 20 50.0 50.0 57.9 57.6 6.2 0.0 0.509008 63306 63471 238-248 1.000000 84.1 tRNA-Trp-tRNA-Pro_p5 tRNA-Trp-tRNA-Pro 5 ACCTACGACATCGGGTTTTG TAGCGCGTTTGTTTTGGGTA 20 20 50.0 45.0 57.9 58.4 6.2 8.4 0.498017 63306 63471 271-281 1.000000 83.2 tRNA-Pro-tRNA-Ile_p1 tRNA-Pro-tRNA-Ile 1 GCTAATCTCCCTTCCTTGGC CATCACCATCAGACACAGGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.059839 82118 82237 1054-1082 1.000000 86.9 tRNA-Pro-tRNA-Ile_p2 tRNA-Pro-tRNA-Ile 2 GATCCAGCCTTTCCTAAGCC CATCACCATCAGACACAGGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.059839 82118 82237 1168-1196 1.000000 86.6 tRNA-Pro-tRNA-Ile_p3 tRNA-Pro-tRNA-Ile 3 GATCCAGCCTTTCCTAAGCC AAAAGATGTTGACCTGCCGT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.044479 82118 82237 1243-1243 0.200000 47.6 tRNA-Pro-tRNA-Ile_p4 tRNA-Pro-tRNA-Ile 4 GCTAATCTCCCTTCCTTGGC AAAAGATGTTGACCTGCCGT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.044479 82118 82237 1129-1129 0.200000 47.6 tRNA-Pro-tRNA-Ile_p5 tRNA-Pro-tRNA-Ile 5 CGTGTAGATCCAGCCTTTCC AAAAGATGTTGACCTGCCGT 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.077419 82118 82237 1249-1249 0.200000 47.4 tRNA-Asn-tRNA-Pro_p1 tRNA-Asn-tRNA-Pro 1 CAAGAGCTCTTTCCTCAGCC AACTCTGGCTATGTCCAAGC 20 20 55.0 50.0 58.3 57.6 26.4 0.0 0.673337 108201 108320 819-848 0.600000 69.4 tRNA-Asn-tRNA-Pro_p2 tRNA-Asn-tRNA-Pro 2 CAAGAGCTCTTTCCTCAGCC ACTCTGGCTATGTCCAAGCT 20 20 55.0 50.0 58.3 58.4 26.4 0.0 0.685652 108201 108320 818-847 0.600000 69.3 tRNA-Asn-tRNA-Pro_p3 tRNA-Asn-tRNA-Pro 3 AACGAGAAAGCTTCTGGACC AACTCTGGCTATGTCCAAGC 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.581289 108201 108320 783-783 0.200000 43.3 tRNA-Asn-tRNA-Pro_p4 tRNA-Asn-tRNA-Pro 4 AACGAGAAAGCTTCTGGACC ACTCTGGCTATGTCCAAGCT 20 20 50.0 50.0 57.8 58.4 0.0 0.0 0.593605 108201 108320 782-782 0.200000 43.3 tRNA-Asn-tRNA-Pro_p5 tRNA-Asn-tRNA-Pro 5 GAGAAAGCTTCTGGACCGAA AACTCTGGCTATGTCCAAGC 20 20 50.0 50.0 57.5 57.6 0.0 0.0 0.867314 108201 108320 780-780 0.200000 41.1 tRNA-Pro-tRNA-Leu_p1 tRNA-Pro-tRNA-Leu 1 GATTCGAACCTGTGACCTCC TCCTAAGAGCAGCGTGTCTA 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.135817 108527 108695 270-313 1.000000 84.2 tRNA-Pro-tRNA-Leu_p2 tRNA-Pro-tRNA-Leu 2 GGATTCGAACCTGTGACCTC TCCTAAGAGCAGCGTGTCTA 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.135817 108527 108695 271-314 1.000000 84.1 tRNA-Pro-tRNA-Leu_p3 tRNA-Pro-tRNA-Leu 3 GATTCGAACCTGTGACCTCC CAGCGTGTCTACCAGTTTCA 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.160456 108527 108695 261-304 1.000000 84.1 tRNA-Pro-tRNA-Leu_p4 tRNA-Pro-tRNA-Leu 4 GGATTCGAACCTGTGACCTC CAGCGTGTCTACCAGTTTCA 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.160456 108527 108695 262-305 1.000000 84.1 tRNA-Pro-tRNA-Leu_p5 tRNA-Pro-tRNA-Leu 5 GATTCGAACCTGTGACCTCC AGCGTGTCTACCAGTTTCAC 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.161937 108527 108695 260-303 1.000000 84.1 tRNA-Leu-tRNA-Asn_p1 tRNA-Leu-tRNA-Asn 1 GGATTTCCACTTCCACCGAG TTTCTGCGAGATGGGCATAC 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.307374 119534 119653 825-975 1.000000 89.2 tRNA-Leu-tRNA-Asn_p2 tRNA-Leu-tRNA-Asn 2 GGATTTCCACTTCCACCGAG ATTTTCTGCGAGATGGGCAT 20 20 55.0 45.0 58.3 57.9 0.0 0.0 0.323904 119534 119653 827-977 1.000000 89.0 tRNA-Leu-tRNA-Asn_p3 tRNA-Leu-tRNA-Asn 3 GGATTTCCACTTCCACCGAG CTGCCTTGGATGCCCATAAT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.266304 119534 119653 1115-1265 1.000000 88.6 tRNA-Leu-tRNA-Asn_p4 tRNA-Leu-tRNA-Asn 4 TCGGTACTAGACGATGAGCA CTGCCTTGGATGCCCATAAT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.326115 119534 119653 1311-1461 1.000000 87.6 tRNA-Leu-tRNA-Asn_p5 tRNA-Leu-tRNA-Asn 5 GGATTTCCACTTCCACCGAG CCAGATAGTTATGCTCCCGC 20 20 55.0 55.0 58.3 57.9 0.0 0.0 0.346988 119534 119653 1281-1335 0.600000 68.7