feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 278 351 -1 74 LSC 0.000000 0 0 300 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 352 759 0 408 LSC 0.066138 25 30 300 57 yes 1.000000 2 1.000000 NA 0.926471 78.400000 psbA gene psbA psbA 760 1818 -1 1059 LSC 0.004721 5 0 14 65 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1819 2018 0 200 LSC 0.020000 4 0 233 38 no 1.000000 2 1.000000 NA 1.000000 51.800000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 2019 2050 -1 32 LSC 0.000000 0 0 6 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 matK gene matK matK 2314 3843 -1 1530 LSC 0.015686 24 0 12 201 no 1.000000 2 1.000000 NA 1.000000 53.600000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3844 4556 0 713 LSC 0.015471 11 2 15 55 no 1.000000 2 1.000000 NA 0.997195 54.000000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4557 4588 -1 32 LSC 0.000000 0 0 27 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4589 5017 0 429 LSC 0.028103 12 2 59 187 no 1.000000 2 1.000000 NA 0.995338 61.200000 rps16 gene rps16 rps16 5018 6144 -1 1127 LSC 0.006211 7 0 1 172 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6145 7256 0 1112 LSC 0.028881 32 4 63 73 yes 1.000000 2 1.000000 NA 0.996403 65.400000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7257 7328 -1 72 LSC 0.000000 0 0 18 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 7329 7672 0 344 LSC 0.023256 8 0 90 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 psbK gene psbK psbK 7673 7858 1 186 LSC 0.000000 0 0 121 120 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_009 igs psbK|psbI psbK-psbI 7859 8233 0 375 LSC 0.008065 3 3 300 146 no 1.000000 2 1.000000 NA 0.992000 55.400000 psbI gene psbI psbI 8234 8344 1 111 LSC 0.000000 0 0 132 35 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 8345 8442 0 98 LSC 0.010204 1 0 243 144 no 1.000000 2 1.000000 NA 1.000000 54.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 8443 8530 -1 88 LSC 0.000000 0 0 62 56 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_011 igs trnS-GCU|trnG-CGA trnS-GCU-trnG-CGA 8531 9229 0 699 LSC 0.018598 13 0 150 68 no 1.000000 2 1.000000 NA 1.000000 59.500000 trnG-CGA_part1 tRNA trnG-CGA trnG-CGA 9230 9256 1 27 LSC 0.000000 0 0 27 41 no 0.000000 1 0.000000 NA 1.000000 20.800000 trnG-CGA_part2 tRNA trnG-CGA trnG-CGA 9957 9996 1 40 LSC 0.000000 0 0 7 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_014 igs trnG-CGA|trnR-UCU trnG-CGA-trnR-UCU 9997 10173 0 177 LSC 0.040936 7 6 47 149 yes 1.000000 2 1.000000 NA 0.966102 67.700000 trnR-UCU tRNA trnR-UCU trnR-UCU 10174 10245 1 72 LSC 0.000000 0 0 20 77 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_015 igs trnR-UCU|atpA trnR-UCU-atpA 10246 10351 0 106 LSC 0.038835 4 3 92 46 yes 1.000000 2 1.000000 NA 0.971698 65.900000 atpA gene atpA atpA 10352 11869 -1 1518 LSC 0.003953 6 0 3 91 no 1.000000 2 1.000000 NA 1.000000 46.200000 IGS_016 igs atpA|atpF atpA-atpF 11870 11924 0 55 LSC 0.000000 0 4 150 36 no 1.000000 2 1.000000 NA 0.927273 44.400000 atpF gene atpF atpF 11925 13179 -1 1255 LSC 0.007981 10 2 205 56 no 1.000000 2 1.000000 NA 0.998406 52.700000 IGS_017 igs atpF|atpH atpF-atpH 13180 13546 0 367 LSC 0.019284 7 4 59 300 no 1.000000 2 1.000000 NA 0.989101 55.400000 atpH gene atpH atpH 13547 13792 -1 246 LSC 0.000000 0 0 170 72 no 0.000000 1 0.000000 NA 1.000000 24.100000 IGS_018 igs atpH|atpI atpH-atpI 13793 14793 0 1001 LSC 0.013145 13 11 300 189 yes 1.000000 2 1.000000 NA 0.988012 66.500000 atpI gene atpI atpI 14794 15528 -1 735 LSC 0.005442 4 0 32 17 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_019 igs atpI|rps2 atpI-rps2 15529 15762 0 234 LSC 0.017467 4 5 35 27 no 1.000000 2 1.000000 NA 0.978632 51.600000 rps2 gene rps2 rps2 15763 16473 -1 711 LSC 0.011252 8 0 92 20 no 1.000000 2 1.000000 NA 1.000000 51.700000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 16474 16677 0 204 LSC 0.029412 6 0 212 25 no 1.000000 2 1.000000 NA 1.000000 56.300000 rpoC2 gene rpoC2 rpoC2 16678 20826 -1 4149 LSC 0.011569 48 0 58 8 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 20827 20997 0 171 LSC 0.011696 2 0 267 291 no 1.000000 2 1.000000 NA 1.000000 59.200000 rpoC1 gene rpoC1 rpoC1 20998 23824 -1 2827 LSC 0.006721 19 0 0 262 no 1.000000 2 1.000000 NA 1.000000 44.800000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 23825 23849 0 25 LSC 0.000000 0 0 191 237 no 0.000000 1 0.000000 NA 1.000000 33.100000 rpoB gene rpoB rpoB 23850 27062 -1 3213 LSC 0.006847 22 0 216 67 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_023 igs rpoB|trnC-GCA rpoB-trnC-GCA 27063 28161 0 1099 LSC 0.012868 14 11 93 40 no 1.000000 2 1.000000 NA 0.989991 55.100000 trnC-GCA tRNA trnC-GCA trnC-GCA 28162 28232 1 71 LSC 0.028169 2 0 86 24 no 1.000000 2 1.000000 NA 1.000000 55.500000 IGS_024 igs trnC-GCA|petN trnC-GCA-petN 28233 29073 0 841 LSC 0.022619 19 1 21 185 yes 1.000000 2 1.000000 NA 0.998811 58.400000 petN gene petN petN 29074 29163 1 90 LSC 0.000000 0 0 133 95 no 0.000000 1 0.000000 NA 1.000000 25.900000 IGS_025 igs petN|psbM petN-psbM 29164 30139 0 976 LSC 0.021538 21 1 223 45 no 1.000000 2 1.000000 NA 0.998975 59.600000 psbM gene psbM psbM 30140 30244 -1 105 LSC 0.009524 1 0 19 121 no 1.000000 2 1.000000 NA 1.000000 44.400000 IGS_026 igs psbM|trnD-GUC psbM-trnD-GUC 30245 30759 0 515 LSC 0.001942 1 0 59 107 no 1.000000 2 1.000000 NA 1.000000 47.500000 trnD-GUC tRNA trnD-GUC trnD-GUC 30760 30833 -1 74 LSC 0.000000 0 0 300 33 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_027 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 30834 30940 0 107 LSC 0.018692 2 0 300 132 no 1.000000 2 1.000000 NA 1.000000 58.100000 trnY-GUA tRNA trnY-GUA trnY-GUA 30941 31024 -1 84 LSC 0.000000 0 0 40 48 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_028 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 31025 31083 0 59 LSC 0.016949 1 0 124 161 no 1.000000 2 1.000000 NA 1.000000 56.500000 trnE-UUC tRNA trnE-UUC trnE-UUC 31084 31156 -1 73 LSC 0.000000 0 0 10 88 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_029 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 31157 31714 0 558 LSC 0.005386 3 1 83 252 no 1.000000 2 1.000000 NA 0.998208 52.400000 trnT-GGU tRNA trnT-GGU trnT-GGU 31715 31786 1 72 LSC 0.000000 0 0 177 180 no 0.000000 1 0.000000 NA 1.000000 32.000000 IGS_030 igs trnT-GGU|psbD trnT-GGU-psbD 31787 33154 0 1368 LSC 0.015695 21 30 249 300 yes 1.000000 2 1.000000 NA 0.978070 69.900000 psbD gene psbD psbD 33155 34216 1 1062 LSC 0.000942 1 0 33 300 no 1.000000 2 1.000000 NA 1.000000 46.800000 psbC gene psbC psbC 34164 35585 1 1422 LSC 0.002813 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.400000 IGS_032 igs psbC|trnS-UGA psbC-trnS-UGA 35586 35829 0 244 LSC 0.000000 0 0 168 283 no 0.000000 1 0.000000 NA 1.000000 31.400000 trnS-UGA tRNA trnS-UGA trnS-UGA 35830 35922 -1 93 LSC 0.000000 0 0 300 190 no 0.000000 1 0.000000 NA 1.000000 33.000000 IGS_033 igs trnS-UGA|psbZ trnS-UGA-psbZ 35923 36241 0 319 LSC 0.012539 4 0 300 65 no 1.000000 2 1.000000 NA 1.000000 50.000000 psbZ gene psbZ psbZ 36242 36430 1 189 LSC 0.005291 1 0 48 82 no 1.000000 2 1.000000 NA 1.000000 44.100000 IGS_034 igs psbZ|trnG-GCC psbZ-trnG-GCC 36431 36715 0 285 LSC 0.003534 1 2 123 72 no 1.000000 2 1.000000 NA 0.992982 45.600000 trnG-GCC tRNA trnG-GCC trnG-GCC 36716 36786 1 71 LSC 0.000000 0 0 202 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_035 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 36787 36954 0 168 LSC 0.011905 2 0 273 140 no 1.000000 2 1.000000 NA 1.000000 54.800000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 36955 37028 -1 74 LSC 0.000000 0 0 20 66 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_036 igs trnfM-CAU|rps14 trnfM-CAU-rps14 37029 37172 0 144 LSC 0.020833 3 0 94 27 no 1.000000 2 1.000000 NA 1.000000 51.500000 rps14 gene rps14 rps14 37173 37475 -1 303 LSC 0.013201 4 0 6 1 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_037 igs rps14|psaB rps14-psaB 37476 37597 0 122 LSC 0.016393 2 0 12 3 no 1.000000 2 1.000000 NA 1.000000 47.200000 psaB gene psaB psaB 37598 39802 -1 2205 LSC 0.004082 9 0 64 300 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_038 igs psaB|psaA psaB-psaA 39803 39827 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 39828 42080 -1 2253 LSC 0.001775 4 0 300 60 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_039 igs psaA|ycf3 psaA-ycf3 42081 42766 0 686 LSC 0.011696 8 2 221 54 no 1.000000 2 1.000000 NA 0.997085 54.800000 ycf3 gene ycf3 ycf3 42767 44731 -1 1965 LSC 0.008155 16 3 24 96 no 1.000000 2 1.000000 NA 0.998473 49.400000 IGS_040 igs ycf3|trnS-GGA ycf3-trnS-GGA 44732 45127 0 396 LSC 0.017722 7 1 137 147 no 1.000000 2 1.000000 NA 0.997475 60.200000 trnS-GGA tRNA trnS-GGA trnS-GGA 45128 45214 1 87 LSC 0.000000 0 0 60 60 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_041 igs trnS-GGA|rps4 trnS-GGA-rps4 45215 45507 0 293 LSC 0.020478 6 0 147 128 no 1.000000 2 1.000000 NA 1.000000 58.900000 rps4 gene rps4 rps4 45508 46113 -1 606 LSC 0.018152 11 0 13 9 no 1.000000 2 1.000000 NA 1.000000 54.900000 IGS_042 igs rps4|trnT-UGU rps4-trnT-UGU 46114 46466 0 353 LSC 0.025496 9 0 5 102 no 1.000000 2 1.000000 NA 1.000000 53.600000 trnT-UGU tRNA trnT-UGU trnT-UGU 46467 46539 -1 73 LSC 0.000000 0 0 22 29 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_043 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 46540 47242 0 703 LSC 0.004348 3 13 95 194 no 1.000000 2 1.000000 NA 0.981508 55.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 47243 47280 1 38 LSC 0.000000 0 0 37 156 no 0.000000 1 0.000000 NA 1.000000 21.500000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 47769 47816 1 48 LSC 0.000000 0 1 184 50 no 1.000000 2 1.000000 NA 0.979167 43.300000 IGS_046 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 47817 48125 0 309 LSC 0.003247 1 1 232 16 no 1.000000 2 1.000000 NA 0.996764 41.100000 trnF-GAA tRNA trnF-GAA trnF-GAA 48126 48198 1 73 LSC 0.013699 1 0 258 10 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_047 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 48199 48759 0 561 LSC 0.016364 9 11 56 12 no 1.000000 2 1.000000 NA 0.980392 55.100000 ndhJ gene ndhJ ndhJ 48760 49236 -1 477 LSC 0.006289 3 0 77 14 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_048 igs ndhJ|ndhK ndhJ-ndhK 49237 49336 0 100 LSC 0.030000 3 0 276 300 yes 1.000000 2 1.000000 NA 1.000000 69.800000 ndhK gene ndhK ndhK 49337 50014 -1 678 LSC 0.001475 1 0 5 252 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_049 igs ndhK|ndhC ndhK-ndhC 50015 50069 0 55 LSC 0.000000 0 0 11 197 no 0.000000 1 0.000000 NA 1.000000 19.600000 ndhC gene ndhC ndhC 50070 50432 -1 363 LSC 0.002755 1 0 66 101 no 1.000000 2 1.000000 NA 1.000000 45.300000 IGS_050 igs ndhC|trnV-UAC ndhC-trnV-UAC 50433 51544 0 1112 LSC 0.011121 12 33 165 281 no 1.000000 2 1.000000 NA 0.970324 65.400000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 51545 51580 -1 36 LSC 0.000000 0 0 100 245 no 0.000000 1 0.000000 NA 1.000000 26.200000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 52177 52214 -1 38 LSC 0.000000 0 0 25 119 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_053 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 52215 52394 0 180 LSC 0.011111 2 0 63 179 no 1.000000 2 1.000000 NA 1.000000 48.600000 trnM-CAU tRNA trnM-CAU trnM-CAU 52395 52467 1 73 LSC 0.000000 0 0 5 106 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_054 igs trnM-CAU|atpE trnM-CAU-atpE 52468 52666 0 199 LSC 0.040201 8 0 78 17 no 1.000000 2 1.000000 NA 1.000000 61.900000 atpE gene atpE atpE 52667 53068 -1 402 LSC 0.004975 2 0 63 266 no 1.000000 2 1.000000 NA 1.000000 47.200000 atpB gene atpB atpB 53065 54561 -1 1497 LSC 0.007348 11 0 213 300 no 1.000000 2 1.000000 NA 1.000000 63.000000 IGS_056 igs atpB|rbcL atpB-rbcL 54562 55338 0 777 LSC 0.009079 7 6 39 300 no 1.000000 2 1.000000 NA 0.992278 52.600000 rbcL gene rbcL rbcL 55339 56799 1 1461 LSC 0.004124 6 6 71 193 no 1.000000 2 1.000000 NA 0.995893 51.800000 IGS_057 igs rbcL|accD rbcL-accD 56800 57489 0 690 LSC 0.016129 11 8 6 26 no 1.000000 2 1.000000 NA 0.988406 54.600000 accD gene accD accD 57490 58971 1 1482 LSC 0.008772 13 0 34 119 no 1.000000 2 1.000000 NA 1.000000 51.300000 IGS_058 igs accD|ycf4 accD-ycf4 58972 59979 0 1008 LSC 0.002982 3 2 300 300 no 1.000000 2 1.000000 NA 0.998016 60.700000 ycf4 gene ycf4 ycf4 59980 60534 1 555 LSC 0.007207 4 0 300 141 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_059 igs ycf4|cemA ycf4-cemA 60535 61386 0 852 LSC 0.018801 16 1 93 106 no 1.000000 2 1.000000 NA 0.998826 61.600000 cemA gene cemA cemA 61387 62076 1 690 LSC 0.004348 3 0 34 20 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_060 igs cemA|petA cemA-petA 62077 62278 0 202 LSC 0.004950 1 0 221 194 no 1.000000 2 1.000000 NA 1.000000 54.900000 petA gene petA petA 62279 63241 1 963 LSC 0.004154 4 0 181 1 no 1.000000 2 1.000000 NA 1.000000 46.200000 IGS_061 igs petA|psbJ petA-psbJ 63242 64241 0 1000 LSC 0.021148 21 7 189 57 yes 1.000000 2 1.000000 NA 0.993000 60.800000 psbJ gene psbJ psbJ 64242 64364 -1 123 LSC 0.008130 1 0 300 98 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_062 igs psbJ|psbL psbJ-psbL 64365 64497 0 133 LSC 0.015038 2 0 65 136 no 1.000000 2 1.000000 NA 1.000000 51.000000 psbL gene psbL psbL 64498 64614 -1 117 LSC 0.000000 0 0 22 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_063 igs psbL|psbF psbL-psbF 64615 64637 0 23 LSC 0.043478 1 0 139 185 yes 1.000000 2 1.000000 NA 1.000000 72.900000 psbF gene psbF psbF 64638 64757 -1 120 LSC 0.000000 0 0 3 65 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_064 igs psbF|psbE psbF-psbE 64758 64771 0 14 LSC 0.000000 0 0 123 51 no 0.000000 1 0.000000 NA 1.000000 22.600000 psbE gene psbE psbE 64772 65023 -1 252 LSC 0.011905 3 0 137 269 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_065 igs psbE|petL psbE-petL 65024 65889 0 866 LSC 0.006985 6 7 41 72 no 1.000000 2 1.000000 NA 0.991917 51.600000 petL gene petL petL 65890 65985 1 96 LSC 0.010417 1 0 64 37 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_066 igs petL|petG petL-petG 65986 66158 0 173 LSC 0.011561 2 0 23 262 no 1.000000 2 1.000000 NA 1.000000 45.900000 petG gene petG petG 66159 66272 1 114 LSC 0.000000 0 0 127 148 no 0.000000 1 0.000000 NA 1.000000 28.300000 IGS_067 igs petG|trnW-CCA petG-trnW-CCA 66273 66394 0 122 LSC 0.000000 0 0 241 26 no 0.000000 1 0.000000 NA 1.000000 20.700000 trnW-CCA tRNA trnW-CCA trnW-CCA 66395 66468 -1 74 LSC 0.013514 1 0 300 9 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_068 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 66469 66641 0 173 LSC 0.040698 7 1 47 103 no 1.000000 2 1.000000 NA 0.994220 65.000000 trnP-UGG tRNA trnP-UGG trnP-UGG 66642 66715 -1 74 LSC 0.000000 0 0 13 29 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_069 igs trnP-UGG|psaJ trnP-UGG-psaJ 66716 66996 0 281 LSC 0.007663 2 20 87 3 no 1.000000 2 1.000000 NA 0.928826 46.300000 psaJ gene psaJ psaJ 66997 67164 1 168 LSC 0.017857 3 0 146 50 no 1.000000 2 1.000000 NA 1.000000 51.500000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 67165 67604 0 440 LSC 0.045558 20 1 153 29 yes 1.000000 2 1.000000 NA 0.997727 69.000000 rpl33 gene rpl33 rpl33 67605 67805 1 201 LSC 0.014925 3 0 9 5 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_071 igs rpl33|rps18 rpl33-rps18 67806 67897 0 92 LSC 0.010870 1 0 27 66 no 1.000000 2 1.000000 NA 1.000000 45.800000 rps18 gene rps18 rps18 67898 68203 1 306 LSC 0.009804 3 0 86 83 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_072 igs rps18|rpl20 rps18-rpl20 68204 68416 0 213 LSC 0.014085 3 0 153 300 no 1.000000 2 1.000000 NA 1.000000 57.100000 rpl20 gene rpl20 rpl20 68417 68824 -1 408 LSC 0.000000 0 0 33 19 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_073 igs rpl20|rps12 rpl20-rps12 68825 69632 0 808 LSC 0.009938 8 3 300 105 no 1.000000 2 1.000000 NA 0.996287 57.700000 rps12_part1 gene rps12 rps12 69633 69746 -1 114 LSC 0.008772 1 0 59 208 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_074 igs rps12|clpP rps12-clpP 69747 69879 0 133 LSC 0.000000 0 6 8 75 no 1.000000 2 1.000000 NA 0.954887 42.500000 clpP gene clpP clpP 69880 71856 -1 1977 LSC 0.007147 14 18 141 147 no 1.000000 2 1.000000 NA 0.990895 58.300000 clpP gene clpP clpP 70751 71856 -1 1106 LSC 0.005425 6 0 212 147 no 1.000000 2 1.000000 NA 1.000000 57.900000 IGS_076 igs clpP|psbB clpP-psbB 71857 72313 0 457 LSC 0.017699 8 5 140 170 no 1.000000 2 1.000000 NA 0.989059 62.500000 psbB gene psbB psbB 72314 73840 1 1527 LSC 0.007204 11 0 88 29 no 1.000000 2 1.000000 NA 1.000000 50.000000 IGS_077 igs psbB|psbT psbB-psbT 73841 74022 0 182 LSC 0.010989 2 0 185 35 no 1.000000 2 1.000000 NA 1.000000 46.400000 psbT gene psbT psbT 74023 74130 1 108 LSC 0.009259 1 0 49 36 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_078 igs psbT|psbN psbT-psbN 74131 74190 0 60 LSC 0.066667 4 0 72 289 yes 1.000000 2 1.000000 NA 1.000000 73.700000 psbN gene psbN psbN 74191 74322 -1 132 LSC 0.000000 0 0 20 157 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_079 igs psbN|psbH psbN-psbH 74323 74427 0 105 LSC 0.000000 0 0 152 52 no 0.000000 1 0.000000 NA 1.000000 22.700000 psbH gene psbH psbH 74428 74649 1 222 LSC 0.013514 3 0 257 3 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_080 igs psbH|petB psbH-petB 74650 74772 0 123 LSC 0.024390 3 0 48 170 no 1.000000 2 1.000000 NA 1.000000 55.100000 petB gene petB petB 74773 76139 1 1367 LSC 0.008053 11 1 5 300 no 1.000000 2 1.000000 NA 0.999268 48.800000 IGS_081 igs petB|petD petB-petD 76140 76332 0 193 LSC 0.000000 0 0 274 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 petD gene petD petD 76333 77547 1 1215 LSC 0.004938 6 0 300 30 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_082 igs petD|rpoA petD-rpoA 77548 77769 0 222 LSC 0.031532 7 0 69 258 no 1.000000 2 1.000000 NA 1.000000 60.800000 rpoA gene rpoA rpoA 77770 78828 -1 1059 LSC 0.006673 7 10 17 71 no 1.000000 2 1.000000 NA 0.990557 49.800000 IGS_083 igs rpoA|rps11 rpoA-rps11 78829 78830 0 2 LSC 0.000000 0 0 101 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 rps11 gene rps11 rps11 78831 79247 -1 417 LSC 0.009592 4 0 103 63 no 1.000000 2 1.000000 NA 1.000000 50.200000 IGS_084 igs rps11|rpl36 rps11-rpl36 79248 79356 0 109 LSC 0.045872 5 0 23 48 yes 1.000000 2 1.000000 NA 1.000000 65.600000 rpl36 gene rpl36 rpl36 79357 79470 -1 114 LSC 0.017544 2 0 22 57 no 1.000000 2 1.000000 NA 1.000000 49.200000 IGS_085 igs rpl36|infA rpl36-infA 79471 79565 0 95 LSC 0.010526 1 0 18 78 no 1.000000 2 1.000000 NA 1.000000 44.900000 infA gene infA infA 79566 79799 -1 234 LSC 0.004274 1 0 37 6 no 1.000000 2 1.000000 NA 1.000000 40.400000 IGS_086 igs infA|rps8 infA-rps8 79800 79920 0 121 LSC 0.016529 2 0 155 210 no 1.000000 2 1.000000 NA 1.000000 58.600000 rps8 gene rps8 rps8 79921 80325 -1 405 LSC 0.007407 3 0 87 8 no 1.000000 2 1.000000 NA 1.000000 44.500000 IGS_087 igs rps8|rpl14 rps8-rpl14 80326 80496 0 171 LSC 0.017544 3 0 82 192 no 1.000000 2 1.000000 NA 1.000000 53.700000 rpl14 gene rpl14 rpl14 80497 80865 -1 369 LSC 0.002710 1 0 4 132 no 1.000000 2 1.000000 NA 1.000000 40.800000 IGS_088 igs rpl14|rpl16 rpl14-rpl16 80866 80991 0 126 LSC 0.000000 0 0 176 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 rpl16 gene rpl16 rpl16 80992 82282 -1 1291 LSC 0.010078 13 1 300 96 no 1.000000 2 1.000000 NA 0.999225 56.800000 IGS_089 igs rpl16|rps3 rpl16-rps3 82283 82417 0 135 LSC 0.007519 1 2 43 12 no 1.000000 2 1.000000 NA 0.985185 44.100000 rps3 gene rps3 rps3 82418 83080 -1 663 LSC 0.010558 7 0 38 83 no 1.000000 2 1.000000 NA 1.000000 52.700000 rpl22 gene rpl22 rpl22 83065 83532 -1 468 LSC 0.006410 3 0 13 80 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_091 igs rpl22|rps19 rpl22-rps19 83533 83590 0 58 LSC 0.000000 0 0 101 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 rps19 gene rps19 rps19 83591 83869 -1 279 LSC 0.007168 2 0 159 46 no 1.000000 2 1.000000 NA 1.000000 45.100000 IGS_092 igs rps19|rpl2 rps19-rpl2 83870 83926 0 57 LSC 0.017544 1 0 57 152 no 1.000000 2 1.000000 NA 1.000000 51.900000 rpl2 gene rpl2 rpl2 83927 85416 -1 1490 LSC 0.010997 16 35 10 159 no 1.000000 2 1.000000 NA 0.976510 53.100000 IGS_093 igs rpl2|rpl23 rpl2-rpl23 85417 85434 0 18 LSC 0.000000 0 0 82 141 no 0.000000 1 0.000000 NA 1.000000 24.900000 rpl23 gene rpl23 rpl23 85435 85716 -1 282 LSC 0.010638 3 0 100 14 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_094 igs rpl23|trnI-CAU rpl23-trnI-CAU 85717 85886 0 170 LSC 0.030303 5 5 6 210 no 1.000000 2 1.000000 NA 0.970588 58.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 85887 85960 -1 74 LSC 0.000000 0 0 55 136 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_095 igs trnI-CAU|ycf2 trnI-CAU-ycf2 85961 86048 0 88 LSC 0.000000 0 0 129 48 no 0.000000 1 0.000000 NA 1.000000 22.400000 ycf2 gene ycf2 ycf2 86049 92864 1 6816 IRb 0.010734 73 15 217 300 yes 1.000000 2 1.000000 NA 0.997799 58.900000 IGS_096 igs ycf2|ycf15 ycf2-ycf15 92865 92954 0 90 IRb 0.000000 0 0 255 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf15 gene ycf15 ycf15 92955 93203 1 249 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_097 igs ycf15|trnL-CAA ycf15-trnL-CAA 93204 93525 0 322 IRb 0.000000 0 0 300 198 no 0.000000 1 0.000000 NA 1.000000 34.100000 trnL-CAA tRNA trnL-CAA trnL-CAA 93526 93606 -1 81 IRb 0.000000 0 0 300 117 no 0.000000 1 0.000000 NA 1.000000 27.500000 IGS_098 igs trnL-CAA|ndhB trnL-CAA-ndhB 93607 94158 0 552 IRb 0.007246 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.900000 ndhB gene ndhB ndhB 94159 96362 -1 2204 IRb 0.000454 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_099 igs ndhB|rps7 ndhB-rps7 96363 96628 0 266 IRb 0.000000 0 0 185 235 no 0.000000 1 0.000000 NA 1.000000 32.600000 rps7 gene rps7 rps7 96629 97096 -1 468 IRb 0.004274 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 IGS_100 igs rps7|rps12 rps7-rps12 97097 97154 0 58 IRb 0.000000 0 0 126 300 no 0.000000 1 0.000000 NA 1.000000 28.200000 rps12_part2 gene rps12 rps12 97155 97948 -1 794 IRb 0.000000 0 0 184 213 no 0.000000 1 0.000000 NA 1.000000 38.800000 IGS_101 igs rps12|trnV-GAC rps12-trnV-GAC 97949 99578 0 1630 IRb 0.002480 4 17 300 102 no 1.000000 2 1.000000 NA 0.989571 53.600000 trnV-GAC tRNA trnV-GAC trnV-GAC 99579 99650 1 72 IRb 0.000000 0 0 21 30 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_102 igs trnV-GAC|rrn16 trnV-GAC-rrn16 99651 99888 0 238 IRb 0.008403 2 0 93 300 no 1.000000 2 1.000000 NA 1.000000 49.300000 rrn16 rRNA rrn16 rrn16 99889 101379 1 1491 IRb 0.002012 3 0 43 87 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_103 igs rrn16|trnI-GAU rrn16-trnI-GAU 101380 101678 0 299 IRb 0.006689 2 0 265 300 no 1.000000 2 1.000000 NA 1.000000 56.300000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 101679 101713 1 35 IRb 0.000000 0 0 85 300 no 0.000000 1 0.000000 NA 1.000000 25.100000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 102657 102692 1 36 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_106 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 102693 102757 0 65 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 102758 102794 1 37 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 103613 103648 1 36 SSC 0.000000 0 0 255 172 no 0.000000 1 0.000000 NA 1.000000 31.600000 IGS_109 igs trnA-UGC|rrn23 trnA-UGC-rrn23 103649 103811 0 163 SSC 0.000000 0 0 291 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 rrn23 rRNA rrn23 rrn23 103812 106622 1 2811 SSC 0.001423 4 0 300 223 no 1.000000 2 1.000000 NA 1.000000 56.800000 IGS_110 igs rrn23|rrn4.5 rrn23-rrn4.5 106623 106720 0 98 SSC 0.000000 0 0 300 125 no 0.000000 1 0.000000 NA 1.000000 28.100000 rrn4.5 rRNA rrn4.5 rrn4.5 106721 106823 1 103 SSC 0.000000 0 0 300 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_111 igs rrn4.5|rrn5 rrn4.5-rrn5 106824 107078 0 255 SSC 0.007843 2 0 300 172 no 1.000000 2 1.000000 NA 1.000000 54.900000 rrn5 rRNA rrn5 rrn5 107079 107199 1 121 SSC 0.000000 0 0 90 51 no 0.000000 1 0.000000 NA 1.000000 22.600000 IGS_112 igs rrn5|trnR-ACG rrn5-trnR-ACG 107200 107441 0 242 SSC 0.004132 1 0 211 300 no 1.000000 2 1.000000 NA 1.000000 54.900000 trnR-ACG tRNA trnR-ACG trnR-ACG 107442 107515 1 74 SSC 0.000000 0 0 190 300 no 0.000000 1 0.000000 NA 1.000000 33.000000 IGS_113 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 107516 108075 0 560 SSC 0.008929 5 0 264 92 no 1.000000 2 1.000000 NA 1.000000 55.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 108076 108147 -1 72 SSC 0.000000 0 0 125 20 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_114 igs trnN-GUU|ycf1 trnN-GUU-ycf1 108148 108475 0 328 SSC 0.009146 3 0 197 300 no 1.000000 2 1.000000 NA 1.000000 58.100000 ycf1 gene ycf1 ycf1 108476 113971 1 5496 SSC 0.022413 123 6 196 13 yes 1.000000 2 1.000000 NA 0.998544 51.500000 IGS_115 igs ycf1|rps15 ycf1-rps15 113972 114367 0 396 SSC 0.040404 16 0 50 5 yes 1.000000 2 1.000000 NA 1.000000 63.100000 rps15 gene rps15 rps15 114368 114640 1 273 SSC 0.010989 3 0 10 14 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_116 igs rps15|ndhH rps15-ndhH 114641 114737 0 97 SSC 0.010309 1 0 191 62 no 1.000000 2 1.000000 NA 1.000000 48.100000 ndhH gene ndhH ndhH 114738 115919 1 1182 SSC 0.010998 13 0 82 29 no 1.000000 2 1.000000 NA 1.000000 52.200000 IGS_117 igs ndhH|ndhA ndhH-ndhA 115920 115920 0 1 SSC 0.000000 0 0 102 28 no 0.000000 1 0.000000 NA 1.000000 20.900000 ndhA gene ndhA ndhA 115921 117953 1 2033 SSC 0.010340 21 2 103 12 no 1.000000 2 1.000000 NA 0.999016 49.600000 IGS_118 igs ndhA|ndhI ndhA-ndhI 117954 118032 0 79 SSC 0.012658 1 0 176 62 no 1.000000 2 1.000000 NA 1.000000 49.400000 ndhI gene ndhI ndhI 118033 118539 1 507 SSC 0.005917 3 0 66 18 no 1.000000 2 1.000000 NA 1.000000 46.600000 IGS_119 igs ndhI|ndhG ndhI-ndhG 118540 118877 0 338 SSC 0.038462 13 0 186 11 no 1.000000 2 1.000000 NA 1.000000 61.200000 ndhG gene ndhG ndhG 118878 119408 1 531 SSC 0.005650 3 0 20 66 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_120 igs ndhG|ndhE ndhG-ndhE 119409 119621 0 213 SSC 0.028169 6 0 258 86 no 1.000000 2 1.000000 NA 1.000000 60.100000 ndhE gene ndhE ndhE 119622 119927 1 306 SSC 0.006536 2 0 16 62 no 1.000000 2 1.000000 NA 1.000000 42.600000 IGS_121 igs ndhE|psaC ndhE-psaC 119928 120172 0 245 SSC 0.036735 9 0 125 89 no 1.000000 2 1.000000 NA 1.000000 65.300000 psaC gene psaC psaC 120173 120418 1 246 SSC 0.004065 1 0 10 91 no 1.000000 2 1.000000 NA 1.000000 40.600000 IGS_122 igs psaC|ndhD psaC-ndhD 120419 120507 0 89 SSC 0.000000 0 1 156 2 no 1.000000 2 1.000000 NA 0.988764 38.700000 ndhD gene ndhD ndhD 120508 122028 1 1521 SSC 0.011177 17 0 245 91 no 1.000000 2 1.000000 NA 1.000000 57.000000 IGS_123 igs ndhD|ccsA ndhD-ccsA 122029 122262 0 234 SSC 0.025641 6 0 3 21 no 1.000000 2 1.000000 NA 1.000000 52.500000 ccsA gene ccsA ccsA 122263 123234 -1 972 SSC 0.014403 14 0 17 9 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_124 igs ccsA|trnL-UAG ccsA-trnL-UAG 123235 123336 0 102 SSC 0.049020 5 0 53 142 yes 1.000000 2 1.000000 NA 1.000000 69.700000 trnL-UAG tRNA trnL-UAG trnL-UAG 123337 123416 -1 80 SSC 0.000000 0 0 9 62 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_125 igs trnL-UAG|rpl32 trnL-UAG-rpl32 123417 124226 0 810 SSC 0.033333 27 0 89 58 yes 1.000000 2 1.000000 NA 1.000000 67.300000 rpl32 gene rpl32 rpl32 124227 124430 -1 204 SSC 0.019608 4 0 82 5 no 1.000000 2 1.000000 NA 1.000000 49.100000 IGS_126 igs rpl32|ndhF rpl32-ndhF 124431 124781 0 351 SSC 0.031339 11 0 15 39 no 1.000000 2 1.000000 NA 1.000000 57.700000 ndhF gene ndhF ndhF 124782 127013 1 2232 SSC 0.018817 42 0 38 3 no 1.000000 2 1.000000 NA 1.000000 53.300000 IGS_127 igs ndhF|trnN-GUU ndhF-trnN-GUU 127014 128091 0 1078 SSC 0.004638 5 0 4 197 no 1.000000 2 1.000000 NA 1.000000 46.700000 trnN-GUU tRNA trnN-GUU trnN-GUU 128092 128163 1 72 SSC 0.000000 0 0 20 125 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_128 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 128164 128723 0 560 SSC 0.008929 5 0 92 264 no 1.000000 2 1.000000 NA 1.000000 55.000000 trnR-ACG tRNA trnR-ACG trnR-ACG 128724 128797 -1 74 SSC 0.000000 0 0 300 190 no 0.000000 1 0.000000 NA 1.000000 33.000000 IGS_129 igs trnR-ACG|rrn5 trnR-ACG-rrn5 128798 129039 0 242 SSC 0.004132 1 0 300 211 no 1.000000 2 1.000000 NA 1.000000 54.900000 rrn5 rRNA rrn5 rrn5 129040 129160 -1 121 SSC 0.000000 0 0 51 90 no 0.000000 1 0.000000 NA 1.000000 22.600000 IGS_130 igs rrn5|rrn4.5 rrn5-rrn4.5 129161 129415 0 255 SSC 0.007843 2 0 172 300 no 1.000000 2 1.000000 NA 1.000000 54.900000 rrn4.5 rRNA rrn4.5 rrn4.5 129416 129518 -1 103 SSC 0.000000 0 0 22 300 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_131 igs rrn4.5|rrn23 rrn4.5-rrn23 129519 129616 0 98 SSC 0.000000 0 0 125 300 no 0.000000 1 0.000000 NA 1.000000 28.100000 rrn23 rRNA rrn23 rrn23 129617 132427 -1 2811 SSC 0.001423 4 0 223 240 no 1.000000 2 1.000000 NA 1.000000 56.800000 IGS_132 igs rrn23|trnI-GAU rrn23-trnI-GAU 132428 133548 0 1121 IRa 0.002681 3 2 9 300 no 1.000000 2 1.000000 NA 0.998216 46.100000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 133549 133584 -1 36 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 134528 134562 -1 35 IRa 0.000000 0 0 300 85 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_135 igs trnI-GAU|rrn16 trnI-GAU-rrn16 134563 134861 0 299 IRa 0.006689 2 0 300 265 no 1.000000 2 1.000000 NA 1.000000 56.300000 rrn16 rRNA rrn16 rrn16 134862 136352 -1 1491 IRa 0.002012 3 0 87 43 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_136 igs rrn16|trnV-GAC rrn16-trnV-GAC 136353 136590 0 238 IRa 0.008403 2 0 300 93 no 1.000000 2 1.000000 NA 1.000000 49.300000 trnV-GAC tRNA trnV-GAC trnV-GAC 136591 136662 -1 72 IRa 0.000000 0 0 30 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_137 igs trnV-GAC|rps12 trnV-GAC-rps12 136663 138292 0 1630 IRa 0.002480 4 17 102 300 no 1.000000 2 1.000000 NA 0.989571 53.600000 rps12_part2 gene rps12 rps12 138293 139086 1 794 IRa 0.000000 0 0 213 184 no 0.000000 1 0.000000 NA 1.000000 38.800000 IGS_138 igs rps12|rps7 rps12-rps7 139087 139144 0 58 IRa 0.000000 0 0 300 126 no 0.000000 1 0.000000 NA 1.000000 28.200000 rps7 gene rps7 rps7 139145 139612 1 468 IRa 0.004274 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 IGS_139 igs rps7|ndhB rps7-ndhB 139613 139878 0 266 IRa 0.000000 0 0 235 185 no 0.000000 1 0.000000 NA 1.000000 32.600000 ndhB gene ndhB ndhB 139879 142082 1 2204 IRa 0.000454 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_140 igs ndhB|trnL-CAA ndhB-trnL-CAA 142083 142634 0 552 IRa 0.007246 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 142635 142715 1 81 IRa 0.000000 0 0 117 300 no 0.000000 1 0.000000 NA 1.000000 27.500000 IGS_141 igs trnL-CAA|ycf15 trnL-CAA-ycf15 142716 143037 0 322 IRa 0.000000 0 0 198 300 no 0.000000 1 0.000000 NA 1.000000 34.100000 ycf15 gene ycf15 ycf15 143038 143286 -1 249 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_142 igs ycf15|trnH-GUG ycf15-trnH-GUG 143287 277 0 4900 IRa 0.003031 14 281 300 97 no 1.000000 2 1.000000 NA 0.942653 51.300000