feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GTG tRNA trnH-GTG trnH-GTG 4 77 -1 74 LSC 0.000000 0 0 300 111 no 0.000000 1 0.000000 0.000000 1.000000 27.100000 IGS_001 igs trnH-GTG|psbA trnH-GTG-psbA 78 469 0 392 LSC 0.004082 4 0 300 300 yes 0.600000 4 0.750000 0.004082 1.000000 50.000000 psbA gene psbA psbA 470 1531 -1 1062 LSC 0.000000 0 0 31 161 no 0.000000 1 0.000000 0.000000 1.000000 27.300000 IGS_002 igs psbA|matK psbA-matK 1532 2056 0 525 LSC 0.001143 1 1 300 101 no 0.400000 3 0.666667 0.001144 1.000000 39.500000 matK gene matK matK 2057 3577 -1 1521 LSC 0.001315 5 0 300 30 no 1.000000 5 1.000000 0.001315 1.000000 47.000000 IGS_003 igs matK|rps16 matK-rps16 3578 5194 0 1617 LSC 0.000989 4 1 15 300 yes 1.000000 5 1.000000 0.000990 1.000000 45.500000 rps16 gene rps16 rps16 5195 6305 -1 1111 LSC 0.000720 2 2 300 119 no 0.400000 3 0.666667 0.000721 1.000000 42.200000 IGS_004 igs rps16|trnQ-TTG rps16-trnQ-TTG 6306 7248 0 943 LSC 0.000424 1 0 300 5 no 0.200000 2 0.500000 0.000424 1.000000 29.400000 trnQ-TTG tRNA trnQ-TTG trnQ-TTG 7249 7320 -1 72 LSC 0.005556 1 0 300 292 no 0.200000 2 0.500000 0.005556 1.000000 41.700000 IGS_005 igs trnQ-TTG|psbK trnQ-TTG-psbK 7321 7675 0 355 LSC 0.001127 1 0 66 300 no 0.200000 2 0.500000 0.001127 1.000000 29.500000 psbK gene psbK psbK 7676 7855 1 180 LSC 0.000000 0 0 62 300 no 0.000000 1 0.000000 0.000000 1.000000 23.400000 IGS_006 igs psbK|psbI psbK-psbI 7856 8254 0 399 LSC 0.000000 0 0 242 86 no 0.000000 1 0.000000 0.000000 1.000000 27.300000 psbI gene psbI psbI 8255 8365 1 111 LSC 0.003604 1 0 300 300 no 0.200000 2 0.500000 0.003604 1.000000 40.200000 IGS_007 igs psbI|trnS-GCT psbI-trnS-GCT 8366 8505 0 140 LSC 0.000000 0 0 24 300 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 trnS-GCT tRNA trnS-GCT trnS-GCT 8506 8593 -1 88 LSC 0.000000 0 0 164 300 no 0.000000 1 0.000000 0.000000 1.000000 31.100000 IGS_008 igs trnS-GCT|trnC-GCA trnS-GCT-trnC-GCA 8594 9359 0 766 LSC 0.000522 1 0 252 225 no 0.200000 2 0.500000 0.000522 1.000000 44.100000 trnC-GCA tRNA trnC-GCA trnC-GCA 9360 9430 1 71 LSC 0.000000 0 0 300 154 no 0.000000 1 0.000000 0.000000 1.000000 30.300000 IGS_009 igs trnC-GCA|petN trnC-GCA-petN 9431 10251 0 821 LSC 0.000974 2 0 300 300 no 0.200000 2 0.500000 0.000974 1.000000 44.500000 petN gene petN petN 10252 10341 1 90 LSC 0.000000 0 0 228 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_010 igs petN|psbM petN-psbM 10342 10834 0 493 LSC 0.000000 0 6 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.100000 psbM gene psbM psbM 10835 10939 -1 105 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_011 igs psbM|trnD-GTC psbM-trnD-GTC 10940 11598 0 659 LSC 0.000607 1 0 300 281 no 0.200000 2 0.500000 0.000607 1.000000 44.200000 trnD-GTC tRNA trnD-GTC trnD-GTC 11599 11672 -1 74 LSC 0.000000 0 0 137 207 no 0.000000 1 0.000000 0.000000 1.000000 29.000000 IGS_012 igs trnD-GTC|trnY-GTA trnD-GTC-trnY-GTA 11673 11785 0 113 LSC 0.000000 0 0 211 94 no 0.000000 1 0.000000 0.000000 1.000000 25.800000 trnY-GTA tRNA trnY-GTA trnY-GTA 11786 11869 -1 84 LSC 0.000000 0 0 300 10 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_013 igs trnY-GTA|trnE-TTC trnY-GTA-trnE-TTC 11870 12023 0 154 LSC 0.002597 1 0 300 300 no 0.200000 2 0.500000 0.002597 1.000000 39.500000 trnE-TTC tRNA trnE-TTC trnE-TTC 12024 12095 -1 72 LSC 0.000000 0 0 143 300 no 0.000000 1 0.000000 0.000000 1.000000 29.500000 IGS_014 igs trnE-TTC|rpoB trnE-TTC-rpoB 12096 12995 0 900 LSC 0.000890 2 12 215 296 yes 1.000000 5 1.000000 0.000893 0.998889 61.000000 rpoB gene rpoB rpoB 12996 16178 1 3183 LSC 0.000754 6 0 275 251 yes 0.600000 4 0.750000 0.000754 1.000000 48.400000 IGS_015 igs rpoB|rpoC1 rpoB-rpoC1 16179 16204 0 26 LSC 0.000000 0 0 300 225 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpoC1 gene rpoC1 rpoC1 16205 19013 1 2809 LSC 0.000285 2 1 300 29 no 0.600000 4 0.750000 0.000285 1.000000 36.000000 IGS_016 igs rpoC1|rpoC2 rpoC1-rpoC2 19014 19133 0 120 LSC 0.003333 1 18 300 300 yes 0.400000 3 0.666667 0.003480 1.000000 49.100000 rpoC2 gene rpoC2 rpoC2 19134 23300 1 4167 LSC 0.000384 4 0 90 300 no 1.000000 5 1.000000 0.000384 1.000000 45.800000 IGS_017 igs rpoC2|rps2 rpoC2-rps2 23301 23541 0 241 LSC 0.000000 0 1 300 300 no 0.000000 2 0.000000 0.000000 1.000000 34.200000 rps2 gene rps2 rps2 23542 24252 1 711 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_018 igs rps2|atpI rps2-atpI 24253 24467 0 215 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpI gene atpI atpI 24468 25211 1 744 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_019 igs atpI|atpH atpI-atpH 25212 26348 0 1137 LSC 0.000352 1 0 300 300 no 0.200000 2 0.500000 0.000352 1.000000 44.000000 atpH gene atpH atpH 26349 26594 1 246 LSC 0.000000 0 0 300 258 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_020 igs atpH|atpF atpH-atpF 26595 26968 0 374 LSC 0.003743 3 0 300 85 yes 0.400000 3 0.666667 0.003743 1.000000 36.900000 atpF gene atpF atpF 26969 28229 1 1261 LSC 0.000317 1 0 91 300 no 0.200000 2 0.500000 0.000317 1.000000 35.800000 IGS_021 igs atpF|atpA atpF-atpA 28230 28294 0 65 LSC 0.000000 0 1 300 300 no 0.200000 2 0.500000 0.000000 1.000000 39.300000 atpA gene atpA atpA 28295 29821 1 1527 LSC 0.000000 0 0 300 268 no 0.000000 1 0.000000 0.000000 1.000000 39.900000 IGS_022 igs atpA|trnR-TCT atpA-trnR-TCT 29822 29952 0 131 LSC 0.000000 0 0 300 137 no 0.000000 1 0.000000 0.000000 1.000000 29.000000 trnR-TCT tRNA trnR-TCT trnR-TCT 29953 30024 -1 72 LSC 0.000000 0 0 300 65 no 0.000000 1 0.000000 0.000000 1.000000 23.600000 IGS_023 igs trnR-TCT|trnT-GGT trnR-TCT-trnT-GGT 30025 31173 0 1149 LSC 0.001741 4 0 300 300 yes 0.600000 4 0.750000 0.001741 1.000000 52.500000 trnT-GGT tRNA trnT-GGT trnT-GGT 31174 31245 1 72 LSC 0.000000 0 0 21 300 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_024 igs trnT-GGT|psbD trnT-GGT-psbD 31246 32428 0 1183 LSC 0.000676 2 0 93 300 no 0.400000 3 0.666667 0.000676 1.000000 40.000000 psbD gene psbD psbD 32429 33490 1 1062 LSC 0.000000 0 0 200 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 psbC gene psbC psbC 33438 34859 1 1422 LSC 0.000281 1 0 300 95 no 0.200000 2 0.500000 0.000281 1.000000 36.100000 IGS_026 igs psbC|trnS-TGA psbC-trnS-TGA 34860 35098 0 239 LSC 0.003347 2 10 300 95 no 0.600000 4 0.750000 0.003432 1.000000 44.600000 trnS-TGA tRNA trnS-TGA trnS-TGA 35099 35181 -1 83 LSC 0.000000 0 0 45 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_027 igs trnS-TGA|psbZ trnS-TGA-psbZ 35182 35518 0 337 LSC 0.001187 1 0 128 300 no 0.200000 2 0.500000 0.001187 1.000000 33.800000 psbZ gene psbZ psbZ 35519 35707 1 189 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_028 igs psbZ|trnG-GCC psbZ-trnG-GCC 35708 36025 0 318 LSC 0.000000 0 2 300 300 no 0.400000 3 0.666667 0.000000 0.996855 42.300000 trnG-GCC tRNA trnG-GCC trnG-GCC 36026 36096 1 71 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_029 igs trnG-GCC|trnM-CAT trnG-GCC-trnM-CAT 36097 36282 0 186 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnM-CAT tRNA trnM-CAT trnM-CAT 36283 36356 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_030 igs trnM-CAT|rps14 trnM-CAT-rps14 36357 36509 0 153 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps14 gene rps14 rps14 36510 36812 -1 303 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_031 igs rps14|psaB rps14-psaB 36813 36945 0 133 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaB gene psaB psaB 36946 39150 -1 2205 LSC 0.000181 1 0 300 300 no 0.200000 2 0.500000 0.000181 1.000000 42.400000 IGS_032 igs psaB|psaA psaB-psaA 39151 39175 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaA gene psaA psaA 39176 41428 -1 2253 LSC 0.000178 1 0 300 300 no 0.200000 2 0.500000 0.000178 1.000000 42.300000 IGS_033 igs psaA|ycf3 psaA-ycf3 41429 42172 0 744 LSC 0.001075 2 0 300 300 yes 0.400000 3 0.666667 0.001075 1.000000 48.300000 ycf3 gene ycf3 ycf3 42173 44111 -1 1939 LSC 0.000619 3 0 41 300 no 0.400000 3 0.666667 0.000619 1.000000 35.100000 IGS_034 igs ycf3|trnS-GGA ycf3-trnS-GGA 44112 45031 0 920 LSC 0.000435 1 0 127 282 no 0.200000 2 0.500000 0.000435 1.000000 38.600000 trnS-GGA tRNA trnS-GGA trnS-GGA 45032 45118 1 87 LSC 0.000000 0 0 35 195 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 IGS_035 igs trnS-GGA|rps4 trnS-GGA-rps4 45119 45424 0 306 LSC 0.002614 2 0 122 147 no 0.200000 2 0.500000 0.002614 1.000000 33.800000 rps4 gene rps4 rps4 45425 46030 -1 606 LSC 0.000660 1 0 12 300 no 0.200000 2 0.500000 0.000660 1.000000 30.200000 IGS_036 igs rps4|trnT-TGT rps4-trnT-TGT 46031 46408 0 378 LSC 0.000000 0 33 300 282 yes 0.600000 4 0.750000 0.000000 0.941799 50.500000 trnT-TGT tRNA trnT-TGT trnT-TGT 46409 46481 -1 73 LSC 0.000000 0 0 300 209 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_037 igs trnT-TGT|trnF-GAA trnT-TGT-trnF-GAA 46482 47918 0 1437 LSC 0.002691 9 11 300 300 yes 1.000000 5 1.000000 0.002375 1.000000 61.600000 trnF-GAA tRNA trnF-GAA trnF-GAA 47919 47991 1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_038 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 47992 48661 0 670 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ndhJ gene ndhJ ndhJ 48662 49138 -1 477 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.400000 IGS_039 igs ndhJ|ndhK ndhJ-ndhK 49139 49240 0 102 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhK gene ndhK ndhK 49241 49918 -1 678 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_040 igs ndhK|ndhC ndhK-ndhC 49919 49965 0 47 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhC gene ndhC ndhC 49966 50328 -1 363 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.100000 IGS_041 igs ndhC|trnM-CAT ndhC-trnM-CAT 50329 52337 0 2009 LSC 0.000796 4 5 300 300 yes 0.600000 4 0.750000 0.000798 1.000000 51.100000 trnM-CAT tRNA trnM-CAT trnM-CAT 52338 52410 1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_042 igs trnM-CAT|atpE trnM-CAT-atpE 52411 52623 0 213 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpE gene atpE atpE 52624 53025 -1 402 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.900000 atpB gene atpB atpB 53022 54515 -1 1494 LSC 0.000535 2 0 300 10 no 0.400000 3 0.666667 0.000535 1.000000 33.700000 IGS_044 igs atpB|rbcL atpB-rbcL 54516 55244 0 729 LSC 0.002473 4 10 300 275 yes 1.000000 5 1.000000 0.002492 0.998628 62.100000 rbcL gene rbcL rbcL 55245 56699 1 1455 LSC 0.000550 2 0 300 300 no 0.200000 2 0.500000 0.000550 1.000000 44.200000 IGS_045 igs rbcL|accD rbcL-accD 56700 57238 0 539 LSC 0.000752 1 8 300 136 no 0.600000 4 0.750000 0.000752 0.987013 47.100000 accD gene accD accD 57239 58702 1 1464 LSC 0.000820 3 0 119 300 no 0.400000 3 0.666667 0.000820 1.000000 42.000000 IGS_046 igs accD|psaI accD-psaI 58703 59390 0 688 LSC 0.001163 2 0 180 300 no 0.400000 3 0.666667 0.001163 1.000000 46.900000 psaI gene psaI psaI 59391 59501 1 111 LSC 0.000000 0 0 227 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_047 igs psaI|ycf4 psaI-ycf4 59502 59906 0 405 LSC 0.000000 0 1 300 300 no 0.200000 2 0.500000 0.000000 1.000000 40.000000 ycf4 gene ycf4 ycf4 59907 60461 1 555 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.100000 IGS_048 igs ycf4|cemA ycf4-cemA 60462 61317 0 856 LSC 0.000467 1 0 300 300 no 0.200000 2 0.500000 0.000467 1.000000 44.100000 cemA gene cemA cemA 61318 62007 1 690 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_049 igs cemA|petA cemA-petA 62008 62233 0 226 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 petA gene petA petA 62234 63196 1 963 LSC 0.000415 1 0 300 300 no 0.200000 2 0.500000 0.000415 1.000000 44.100000 IGS_050 igs petA|psbJ petA-psbJ 63197 63971 0 775 LSC 0.000516 1 0 300 300 no 0.200000 2 0.500000 0.000516 1.000000 44.100000 psbJ gene psbJ psbJ 63972 64094 -1 123 LSC 0.000000 0 0 120 300 no 0.000000 1 0.000000 0.000000 1.000000 27.700000 IGS_051 igs psbJ|psbL psbJ-psbL 64095 64242 0 148 LSC 0.000000 0 0 243 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbL gene psbL psbL 64243 64359 -1 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_052 igs psbL|psbF psbL-psbF 64360 64381 0 22 LSC 0.000000 0 0 300 297 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbF gene psbF psbF 64382 64501 -1 120 LSC 0.000000 0 0 300 177 no 0.000000 1 0.000000 0.000000 1.000000 32.000000 IGS_053 igs psbF|psbE psbF-psbE 64502 64510 0 9 LSC 0.000000 0 0 300 168 no 0.000000 1 0.000000 NA 1.000000 31.400000 psbE gene psbE psbE 64511 64762 -1 252 LSC 0.001587 1 0 300 300 no 0.200000 2 0.500000 0.001587 1.000000 38.700000 IGS_054 igs psbE|petL psbE-petL 64763 66045 0 1283 LSC 0.000312 1 1 83 300 no 0.400000 3 0.666667 0.000312 0.999221 39.000000 petL gene petL petL 66046 66141 1 96 LSC 0.000000 0 0 223 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_055 igs petL|petG petL-petG 66142 66307 0 166 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 petG gene petG petG 66308 66421 1 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_056 igs petG|trnW-CCA petG-trnW-CCA 66422 66538 0 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnW-CCA tRNA trnW-CCA trnW-CCA 66539 66612 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_057 igs trnW-CCA|trnP-TGG trnW-CCA-trnP-TGG 66613 66776 0 164 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnP-TGG tRNA trnP-TGG trnP-TGG 66777 66850 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_058 igs trnP-TGG|psaJ trnP-TGG-psaJ 66851 67157 0 307 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.900000 psaJ gene psaJ psaJ 67158 67292 1 135 LSC 0.000000 0 0 300 260 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_059 igs psaJ|rpl33 psaJ-rpl33 67293 67735 0 443 LSC 0.000903 1 0 300 216 no 0.200000 2 0.500000 0.000903 1.000000 41.200000 rpl33 gene rpl33 rpl33 67736 67936 1 201 LSC 0.000000 0 0 182 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 IGS_060 igs rpl33|rps18 rpl33-rps18 67937 68113 0 177 LSC 0.007910 3 0 300 300 no 0.200000 3 0.333333 0.007910 1.000000 43.200000 rps18 gene rps18 rps18 68114 68419 1 306 LSC 0.000000 0 0 43 89 no 0.000000 1 0.000000 0.000000 1.000000 22.100000 IGS_061 igs rps18|rpl20 rps18-rpl20 68420 68667 0 248 LSC 0.002419 1 0 300 142 no 0.000000 2 0.000000 0.002419 1.000000 31.000000 rpl20 gene rpl20 rpl20 68668 69048 -1 381 LSC 0.001575 1 0 158 153 no 0.000000 2 0.000000 0.001575 1.000000 32.900000 IGS_062 igs rpl20|rps12 rpl20-rps12 69049 69792 0 744 LSC 0.001075 2 0 238 300 no 0.400000 3 0.666667 0.001075 1.000000 48.300000 rps12_part1 gene rps12 rps12 69793 69906 -1 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_063 igs rps12|clpP rps12-clpP 69907 70061 0 155 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 clpP gene clpP clpP 70062 72075 -1 2014 LSC 0.000199 1 2 300 300 yes 0.600000 4 0.750000 0.000199 1.000000 50.400000 IGS_064 igs clpP|psbB clpP-psbB 72076 72528 0 453 LSC 0.000000 0 0 23 300 no 0.000000 1 0.000000 0.000000 1.000000 23.700000 psbB gene psbB psbB 72529 74055 1 1527 LSC 0.000262 1 0 300 34 no 0.200000 2 0.500000 0.000262 1.000000 31.400000 IGS_065 igs psbB|psbT psbB-psbT 74056 74248 0 193 LSC 0.002073 1 0 300 300 no 0.200000 2 0.500000 0.002073 1.000000 39.100000 psbT gene psbT psbT 74249 74350 1 102 LSC 0.000000 0 0 158 300 no 0.000000 1 0.000000 0.000000 1.000000 30.600000 IGS_066 igs psbT|psbN psbT-psbN 74351 74447 0 97 LSC 0.000000 0 24 260 300 no 0.200000 2 0.500000 0.000000 0.752577 34.500000 psbN gene psbN psbN 74448 74579 -1 132 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_067 igs psbN|psbH psbN-psbH 74580 74663 0 84 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbH gene psbH psbH 74664 74903 1 240 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 petB gene petB petB 74770 76446 1 1677 LSC 0.001073 4 0 300 300 yes 0.600000 4 0.750000 0.001073 1.000000 51.700000 IGS_069 igs petB|petD petB-petD 76447 76625 0 179 LSC 0.000000 0 0 72 300 no 0.000000 1 0.000000 0.000000 1.000000 24.100000 petD gene petD petD 76626 77833 1 1208 LSC 0.000000 0 0 251 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_070 igs petD|rpoA petD-rpoA 77834 78031 0 198 LSC 0.000000 0 1 300 300 no 0.200000 2 0.500000 0.000000 1.000000 38.100000 rpoA gene rpoA rpoA 78032 79039 -1 1008 LSC 0.001984 5 0 300 300 yes 1.000000 5 1.000000 0.001984 1.000000 60.300000 IGS_071 igs rpoA|rps11 rpoA-rps11 79040 79119 0 80 LSC 0.000000 0 0 26 300 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 rps11 gene rps11 rps11 79120 79530 -1 411 LSC 0.000000 0 0 106 300 no 0.000000 1 0.000000 0.000000 1.000000 29.000000 IGS_072 igs rps11|rpl36 rps11-rpl36 79531 79641 0 111 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl36 gene rpl36 rpl36 79642 79755 -1 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_073 igs rpl36|infA rpl36-infA 79756 79870 0 115 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 infA gene infA infA 79871 80104 -1 234 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_074 igs infA|rps8 infA-rps8 80105 80225 0 121 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps8 gene rps8 rps8 80226 80630 -1 405 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.900000 IGS_075 igs rps8|rpl14 rps8-rpl14 80631 80826 0 196 LSC 0.000000 0 3 300 300 no 0.400000 3 0.666667 0.000000 1.000000 43.100000 rpl14 gene rpl14 rpl14 80827 81195 -1 369 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.200000 IGS_076 igs rpl14|rpl16 rpl14-rpl16 81196 81312 0 117 LSC 0.000000 0 1 300 300 no 0.200000 2 0.500000 0.000000 1.000000 38.500000 rpl16 gene rpl16 rpl16 81313 82734 -1 1422 LSC 0.000844 3 0 300 300 no 0.400000 3 0.666667 0.000844 1.000000 48.100000 IGS_077 igs rpl16|rps3 rpl16-rps3 82735 82881 0 147 LSC 0.000000 0 0 300 176 no 0.000000 1 0.000000 0.000000 1.000000 31.900000 rps3 gene rps3 rps3 82882 83538 -1 657 LSC 0.000609 1 0 300 178 no 0.200000 2 0.500000 0.000609 1.000000 42.600000 rpl22 gene rpl22 rpl22 83523 83996 -1 474 LSC 0.000844 1 0 300 154 no 0.200000 2 0.500000 0.000844 1.000000 38.300000 IGS_079 igs rpl22|rps19 rpl22-rps19 83997 84060 0 64 LSC 0.000000 0 1 279 90 no 0.200000 2 0.500000 0.000000 1.000000 31.100000 rps19 gene rps19 rps19 84061 84339 -1 279 LSC 0.002867 2 0 300 300 no 0.400000 3 0.666667 0.002867 1.000000 43.400000 IGS_080 igs rps19|rpl2 rps19-rpl2 84340 84393 0 54 IRb 0.000000 0 0 75 300 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 rpl2 gene rpl2 rpl2 84394 85883 -1 1490 IRb 0.000000 0 0 129 300 no 0.000000 1 0.000000 0.000000 1.000000 34.700000 IGS_081 igs rpl2|rpl23 rpl2-rpl23 85884 85901 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 85902 86183 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_082 igs rpl23|trnI-CAT rpl23-trnI-CAT 86184 86348 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAT tRNA trnI-CAT trnI-CAT 86349 86422 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_083 igs trnI-CAT|ycf2 trnI-CAT-ycf2 86423 86533 0 111 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ycf2 gene ycf2 ycf2 86534 93364 1 6831 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_084 igs ycf2|trnL-CAA ycf2-trnL-CAA 93365 93772 0 408 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 36.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 93773 93853 -1 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_085 igs trnL-CAA|ndhB trnL-CAA-ndhB 93854 94435 0 582 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.600000 ndhB gene ndhB ndhB 94436 96637 -1 2202 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.500000 IGS_086 igs ndhB|rps7 ndhB-rps7 96638 96926 0 289 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps7 gene rps7 rps7 96927 97394 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_087 igs rps7|rps12 rps7-rps12 97395 97997 0 603 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 rps12_part2 gene rps12 rps12 97998 98240 -1 243 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_088 igs rps12|ycf15 rps12-ycf15 98241 99203 0 963 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf15 gene ycf15 ycf15 99204 99395 -1 192 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_089 igs ycf15|trnV-GAC ycf15-trnV-GAC 99396 100083 0 688 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 trnV-GAC tRNA trnV-GAC trnV-GAC 100084 100155 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_090 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 100156 100383 0 228 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn16S rRNA rrn16S rrn16S 100384 101873 -1 1490 IRb 0.000000 0 0 300 43 no 0.000000 1 0.000000 0.000000 1.000000 28.200000 IGS_091 igs rrn16S|rrn23S rrn16S-rrn23S 101874 103672 0 1799 IRb 0.000222 1 0 300 300 no 0.200000 2 0.500000 0.000222 1.000000 43.300000 rrn23S rRNA rrn23S rrn23S 103673 107105 -1 3433 IRb 0.000000 0 0 300 176 no 0.000000 1 0.000000 0.000000 1.000000 34.400000 IGS_092 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 107106 107204 0 99 IRb 0.000000 0 0 300 77 no 0.000000 1 0.000000 0.000000 1.000000 24.500000 rrn4.5S rRNA rrn4.5S rrn4.5S 107205 107469 -1 265 IRb 0.002264 1 0 300 234 yes 0.000000 2 0.000000 0.002264 1.000000 35.200000 IGS_093 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 107470 107551 0 82 IRb 0.000000 0 0 187 152 no 0.000000 1 0.000000 0.000000 1.000000 30.100000 rrn5S rRNA rrn5S rrn5S 107552 107673 1 122 IRb 0.000000 0 0 269 30 no 0.000000 1 0.000000 0.000000 1.000000 21.000000 IGS_094 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 107674 107925 0 252 IRb 0.003968 2 0 300 218 no 0.200000 3 0.333333 0.003968 1.000000 40.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 107926 107999 1 74 IRb 0.000000 0 0 139 144 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 IGS_095 igs trnR-ACG|trnN-GTT trnR-ACG-trnN-GTT 108000 108465 0 466 IRb 0.000858 1 0 213 300 no 0.200000 2 0.500000 0.000858 1.000000 41.600000 trnN-GTT tRNA trnN-GTT trnN-GTT 108466 108537 -1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_096 igs trnN-GTT|ycf1 trnN-GTT-ycf1 108538 108864 0 327 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.300000 ycf1 gene ycf1 ycf1 108865 114156 1 5292 SSC 0.001247 16 6 300 102 yes 1.000000 5 1.000000 0.001248 1.000000 46.200000 IGS_097 igs ycf1|rps15 ycf1-rps15 114157 114569 0 413 SSC 0.000969 1 0 291 300 no 0.200000 2 0.500000 0.000969 1.000000 40.600000 rps15 gene rps15 rps15 114570 114848 1 279 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_098 igs rps15|ndhH rps15-ndhH 114849 114939 0 91 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhH gene ndhH ndhH 114940 116121 1 1182 SSC 0.000677 2 0 300 39 no 0.400000 3 0.666667 0.000677 1.000000 35.900000 IGS_099 igs ndhH|ndhA ndhH-ndhA 116122 116122 0 1 SSC 0.000000 0 0 280 38 no 0.000000 1 0.000000 NA 1.000000 21.600000 ndhA gene ndhA ndhA 116123 118272 1 2150 SSC 0.000558 3 0 281 300 no 0.400000 3 0.666667 0.000558 1.000000 46.600000 IGS_100 igs ndhA|ndhI ndhA-ndhI 118273 118350 0 78 SSC 0.000000 0 0 202 249 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhI gene ndhI ndhI 118351 118851 1 501 SSC 0.001597 2 0 280 300 no 0.200000 2 0.500000 0.001597 1.000000 42.900000 IGS_101 igs ndhI|ndhG ndhI-ndhG 118852 119192 0 341 SSC 0.000000 0 0 198 300 no 0.000000 1 0.000000 0.000000 1.000000 34.500000 ndhG gene ndhG ndhG 119193 119723 1 531 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.600000 IGS_102 igs ndhG|ndhE ndhG-ndhE 119724 119940 0 217 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhE gene ndhE ndhE 119941 120246 1 306 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.900000 IGS_103 igs ndhE|psaC ndhE-psaC 120247 120482 0 236 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaC gene psaC psaC 120483 120728 1 246 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_104 igs psaC|ndhD psaC-ndhD 120729 120968 0 240 SSC 0.000000 0 0 300 214 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhD gene ndhD ndhD 120969 122351 1 1383 SSC 0.000578 2 0 300 10 no 0.400000 3 0.666667 0.000578 1.000000 33.700000 IGS_105 igs ndhD|ccsA ndhD-ccsA 122352 122607 0 256 SSC 0.001563 1 0 300 300 no 0.200000 2 0.500000 0.001563 1.000000 38.700000 ccsA gene ccsA ccsA 122608 123576 -1 969 SSC 0.001032 2 0 245 300 no 0.200000 3 0.333333 0.001032 1.000000 44.500000 IGS_106 igs ccsA|trnL-TAG ccsA-trnL-TAG 123577 123684 0 108 SSC 0.000000 0 0 300 197 no 0.000000 1 0.000000 0.000000 1.000000 33.500000 trnL-TAG tRNA trnL-TAG trnL-TAG 123685 123764 -1 80 SSC 0.000000 0 0 300 117 no 0.000000 1 0.000000 0.000000 1.000000 27.500000 IGS_107 igs trnL-TAG|rpl32 trnL-TAG-rpl32 123765 124633 0 869 SSC 0.002071 4 0 300 300 yes 0.600000 4 0.750000 0.002071 1.000000 52.800000 rpl32 gene rpl32 rpl32 124634 124798 -1 165 SSC 0.000000 0 0 28 209 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 IGS_108 igs rpl32|ndhF rpl32-ndhF 124799 125854 0 1056 SSC 0.001326 3 1 193 300 yes 1.000000 5 1.000000 0.001326 1.000000 59.300000 ndhF gene ndhF ndhF 125855 128089 1 2235 SSC 0.000179 1 23 278 224 yes 0.600000 4 0.750000 0.000181 0.989709 50.800000 ycf1 gene ycf1 ycf1 128063 128677 -1 615 IRa 0.000654 1 23 300 300 yes 0.600000 4 0.750000 0.000676 0.962602 55.200000 IGS_110 igs ycf1|trnN-GTT ycf1-trnN-GTT 128678 129004 0 327 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.300000 trnN-GTT tRNA trnN-GTT trnN-GTT 129005 129076 1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_111 igs trnN-GTT|trnR-ACG trnN-GTT-trnR-ACG 129077 129542 0 466 IRa 0.000858 1 0 300 213 no 0.200000 2 0.500000 0.000858 1.000000 41.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 129543 129616 -1 74 IRa 0.000000 0 0 144 139 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 IGS_112 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 129617 129868 0 252 IRa 0.003968 2 0 218 300 no 0.200000 3 0.333333 0.003968 1.000000 40.300000 rrn5S rRNA rrn5S rrn5S 129869 129990 -1 122 IRa 0.000000 0 0 30 269 no 0.000000 1 0.000000 0.000000 1.000000 21.000000 IGS_113 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 129991 130072 0 82 IRa 0.000000 0 0 152 187 no 0.000000 1 0.000000 0.000000 1.000000 30.100000 rrn4.5S rRNA rrn4.5S rrn4.5S 130073 130337 1 265 IRa 0.002264 1 0 234 300 no 0.000000 2 0.000000 0.002264 1.000000 35.200000 IGS_114 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 130338 130436 0 99 IRa 0.000000 0 0 77 300 no 0.000000 1 0.000000 0.000000 1.000000 24.500000 rrn23S rRNA rrn23S rrn23S 130437 133869 1 3433 IRa 0.000000 0 0 176 300 no 0.000000 1 0.000000 0.000000 1.000000 34.400000 IGS_115 igs rrn23S|rrn16S rrn23S-rrn16S 133870 135668 0 1799 IRa 0.000222 1 0 300 300 no 0.200000 2 0.500000 0.000222 1.000000 43.300000 rrn16S rRNA rrn16S rrn16S 135669 137158 1 1490 IRa 0.000000 0 0 43 300 no 0.000000 1 0.000000 0.000000 1.000000 28.200000 IGS_116 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 137159 137386 0 228 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 137387 137458 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_117 igs trnV-GAC|ycf15 trnV-GAC-ycf15 137459 138146 0 688 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf15 gene ycf15 ycf15 138147 138338 1 192 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_118 igs ycf15|rps12 ycf15-rps12 138339 139301 0 963 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 rps12_part2 gene rps12 rps12 139302 139544 1 243 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_119 igs rps12|rps7 rps12-rps7 139545 140147 0 603 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 rps7 gene rps7 rps7 140148 140615 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_120 igs rps7|ndhB rps7-ndhB 140616 140904 0 289 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhB gene ndhB ndhB 140905 143106 1 2202 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.500000 IGS_121 igs ndhB|trnL-CAA ndhB-trnL-CAA 143107 143688 0 582 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 143689 143769 1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_122 igs trnL-CAA|ycf2 trnL-CAA-ycf2 143770 144177 0 408 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 36.000000 ycf2 gene ycf2 ycf2 144178 151008 -1 6831 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_123 igs ycf2|trnI-CAT ycf2-trnI-CAT 151009 151119 0 111 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAT tRNA trnI-CAT trnI-CAT 151120 151193 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_124 igs trnI-CAT|rpl23 trnI-CAT-rpl23 151194 151358 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 151359 151640 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_125 igs rpl23|rpl2 rpl23-rpl2 151641 151658 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 151659 153148 1 1490 IRa 0.000000 0 0 300 298 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_126 igs rpl2|trnH-GTG rpl2-trnH-GTG 153149 3 0 113 IRa 0.000000 0 8 300 185 no 0.400000 3 0.666667 0.000000 1.000000 45.900000