primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score chlB-trnQ-UUG_p1 chlB-trnQ-UUG 1 TCCTAGAGGAGCGTGCATAA TGGTCCTGTTATTGCGAAGG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.175315 7824 8015 336-337 1.000000 79.8 chlB-trnQ-UUG_p2 chlB-trnQ-UUG 2 TCCTAGAGGAGCGTGCATAA GGTCCTGTTATTGCGAAGGT 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.176790 7824 8015 335-336 1.000000 79.8 chlB-trnQ-UUG_p3 chlB-trnQ-UUG 3 GAGCAGGACCAGCATACATC TGGTCCTGTTATTGCGAAGG 20 20 55.0 50.0 58.1 57.9 11.9 0.0 0.231628 7824 8015 268-269 1.000000 79.6 chlB-trnQ-UUG_p4 chlB-trnQ-UUG 4 GAGCAGGACCAGCATACATC GGTCCTGTTATTGCGAAGGT 20 20 55.0 50.0 58.1 57.9 11.9 0.0 0.233103 7824 8015 267-268 1.000000 79.6 chlB-trnQ-UUG_p5 chlB-trnQ-UUG 5 AGCTACTCGTAGGGTTCCAA TGGTCCTGTTATTGCGAAGG 20 20 50.0 50.0 57.8 57.9 6.3 0.0 0.334912 7824 8015 291-292 1.000000 78.7 trnG-UCC_p1 trnG-UCC 1 CCAGGGTATTCATAGGAGAGGT GGACAAAAGATCGATCTGTATGC 22 23 50.0 43.5 58.1 57.7 0.0 27.9 5.472740 43514 43536 177-177 1.000000 40.5 trnG-UCC_p2 trnG-UCC 2 ACCAGGGTATTCATAGGAGAGG GGACAAAAGATCGATCTGTATGC 22 23 50.0 43.5 58.1 57.7 0.0 27.9 5.472740 43514 43536 178-178 1.000000 40.4 trnG-UCC_p3 trnG-UCC 3 ACCAGGGTATTCATAGGAGAGG TGGACAAAAGATCGATCTGT 22 20 50.0 40.0 58.1 54.4 0.0 27.9 5.742373 43514 43536 179-179 1.000000 40.4 trnG-UCC_p4 trnG-UCC 4 CCAGGGTATTCATAGGAGAGGT TGGACAAAAGATCGATCTGT 22 20 50.0 40.0 58.1 54.4 0.0 27.9 5.742373 43514 43536 178-178 1.000000 40.4 trnG-UCC_p5 trnG-UCC 5 CCAGGGTATTCATAGGAGAGGT TTGGACAAAAGATCGATCTGT 22 21 50.0 38.1 58.1 55.2 0.0 27.9 5.894052 43514 43536 179-179 1.000000 40.4 rpl32_p1 rpl32 1 CACAAACCTCTTTGGGACGA CGACTCTCGCCGTATGAAAG 20 20 50.0 55.0 58.0 58.5 0.0 0.0 0.570332 55052 55852 1796-1813 1.000000 84.3 rpl32_p2 rpl32 2 TTCCAAATTAACGTGGCCCA CGACTCTCGCCGTATGAAAG 20 20 45.0 55.0 58.0 58.5 0.0 0.0 0.535327 55052 55852 1909-1926 1.000000 84.2 rpl32_p3 rpl32 3 TGCATTGATGGATGATGGGG CGACTCTCGCCGTATGAAAG 20 20 50.0 55.0 58.0 58.5 0.0 0.0 0.536062 55052 55852 2078-2095 1.000000 83.6 rpl32_p4 rpl32 4 TCGTTTACGTTTACCCGCAA CGACTCTCGCCGTATGAAAG 20 20 45.0 55.0 58.1 58.5 0.0 0.0 0.674034 55052 55852 1821-1838 1.000000 83.4 rpl32_p5 rpl32 5 ATCATGAGGTCCTTCTCCGT CGACTCTCGCCGTATGAAAG 20 20 50.0 55.0 57.8 58.5 0.1 0.0 0.699032 55052 55852 2045-2062 1.000000 82.4 rpl32-trnM-CAU_p1 rpl32-trnM-CAU 1 ATCTTCGATGTCGCAGCAAT ACCAGCTGTATCGCTATCCT 20 20 45.0 50.0 58.1 58.0 0.0 13.8 0.057118 55853 56383 1274-1276 1.000000 82.9 rpl32-trnM-CAU_p2 rpl32-trnM-CAU 2 GATAACGATCGGCAAGCTCA ACCAGCTGTATCGCTATCCT 20 20 50.0 50.0 58.1 58.0 21.0 13.8 0.149564 55853 56383 1152-1154 1.000000 82.1 rpl32-trnM-CAU_p3 rpl32-trnM-CAU 3 ATCTTCGATGTCGCAGCAAT CCGTCTGTAGCACTCATAGC 20 20 45.0 55.0 58.1 57.9 0.0 0.0 0.181526 55853 56383 1357-1359 1.000000 81.7 rpl32-trnM-CAU_p4 rpl32-trnM-CAU 4 TCCCACTCCTCCCTTTCTTT ACCAGCTGTATCGCTATCCT 20 20 50.0 50.0 57.9 58.0 0.0 13.8 0.136363 55853 56383 1458-1458 0.500000 58.9 rpl32-trnM-CAU_p5 rpl32-trnM-CAU 5 TTCCCACTCCTCCCTTTCTT ACCAGCTGTATCGCTATCCT 20 20 50.0 50.0 57.9 58.0 0.0 13.8 0.136363 55853 56383 1459-1459 0.500000 58.9 trnM-CAU-atpB_p1 trnM-CAU-atpB 1 GCGAGAGTCGTTGGTTCAAA CCTGCCGTATGCTCAAAAGA 20 20 50.0 50.0 58.8 58.3 0.0 0.0 1.047795 56456 56699 330-331 1.000000 74.3 trnM-CAU-atpB_p2 trnM-CAU-atpB 2 GCTTTCATACGGCGAGAGTC CCTGCCGTATGCTCAAAAGA 20 20 55.0 50.0 58.8 58.3 16.6 0.0 1.060819 56456 56699 341-342 1.000000 74.1 trnM-CAU-atpB_p3 trnM-CAU-atpB 3 AGAGTATCGCTTTCATACGGC CCTGCCGTATGCTCAAAAGA 21 20 47.6 50.0 58.0 58.3 0.0 0.0 1.276766 56456 56699 349-350 1.000000 72.3 trnM-CAU-atpB_p4 trnM-CAU-atpB 4 GCGAGAGTCGTTGGTTCAA CCTGCCGTATGCTCAAAAGA 19 20 52.6 50.0 58.1 58.3 0.0 0.0 1.367123 56456 56699 330-331 1.000000 71.7 trnM-CAU-atpB_p5 trnM-CAU-atpB 5 GCGAGAGTCGTTGGTTCAAA ATCTGAGTAATACGGCCTGC 20 20 50.0 50.0 58.8 57.2 0.0 0.0 1.607623 56456 56699 345-346 1.000000 69.7 ycf1_p1 ycf1 1 CTCACTCGGTCTTCAAGCTC TTCTGTTCACGTGTGGAAGG 20 20 55.0 50.0 58.0 58.1 0.0 16.5 0.062465 73659 73778 734-761 1.000000 84.9 ycf1_p2 ycf1 2 CTCTCACTCGGTCTTCAAGC TTCTGTTCACGTGTGGAAGG 20 20 55.0 50.0 58.0 58.1 0.0 16.5 0.062465 73659 73778 736-763 1.000000 84.8 ycf1_p3 ycf1 3 GCTCTCACTCGGTCTTCAAG TTCTGTTCACGTGTGGAAGG 20 20 55.0 50.0 58.0 58.1 0.0 16.5 0.062465 73659 73778 737-764 1.000000 84.8 ycf1_p4 ycf1 4 CTCACTCGGTCTTCAAGCTC AGTCTTCCTTCAGGGTCCTC 20 20 55.0 55.0 58.0 58.1 0.0 0.0 0.064990 73659 73778 579-597 1.000000 84.7 ycf1_p5 ycf1 5 CTCACTCGGTCTTCAAGCTC GTCTTCCTTCAGGGTCCTCT 20 20 55.0 55.0 58.0 58.1 0.0 0.0 0.064990 73659 73778 578-596 1.000000 84.7 ycf1-rps12_p1 ycf1-rps12 1 ACATCTGTTTAGCCAAGGCA CCTTTACGCTGAGGACATCC 20 20 45.0 55.0 57.4 58.1 14.4 0.0 0.643510 74573 75626 1131-1188 1.000000 80.6 ycf1-rps12_p2 ycf1-rps12 2 ACATCTGTTTAGCCAAGGCA GCACATACACCCTAGCACAT 20 20 45.0 50.0 57.4 57.7 14.4 0.0 0.916898 74573 75626 1154-1211 1.000000 78.4 ycf1-rps12_p3 ycf1-rps12 3 ACATCTGTTTAGCCAAGGCA TTTCTATTGGCTGTCTCGCG 20 20 45.0 50.0 57.4 58.4 14.4 0.0 0.944408 74573 75626 1085-1142 1.000000 78.2 ycf1-rps12_p4 ycf1-rps12 4 ACATCTGTTTAGCCAAGGCA ACTCCTTTACGCTGAGGACA 20 20 45.0 50.0 57.4 58.4 14.4 0.0 0.955793 74573 75626 1134-1191 1.000000 78.1 ycf1-rps12_p5 ycf1-rps12 5 ACATCTGTTTAGCCAAGGCA GCTGTCTCGCGTTTCTAGTA 20 20 45.0 50.0 57.4 57.5 14.4 5.8 1.124181 74573 75626 1076-1133 1.000000 76.8 infA_p1 infA 1 ATTTTGCGAACAGAAGCACG AAACAGTTCGAGTAGCTGCT 20 20 45.0 45.0 58.0 57.2 0.0 3.1 0.858547 92920 93228 904-1040 1.000000 81.3 infA_p2 infA 2 ACGAATCAGACGGCACTTTT AAACAGTTCGAGTAGCTGCT 20 20 45.0 45.0 58.1 57.2 0.0 3.1 0.943037 92920 93228 929-1065 1.000000 80.5 infA_p3 infA 3 GCACCTTTGAATCCACAAGC AAACAGTTCGAGTAGCTGCT 20 20 50.0 45.0 57.9 57.2 0.0 3.1 0.892252 92920 93228 1333-1450 1.000000 79.8 infA_p4 infA 4 GTTTGCCCTCGTGTATCTGT AAACAGTTCGAGTAGCTGCT 20 20 50.0 45.0 57.9 57.2 0.0 3.1 0.916753 92920 93228 1291-1408 1.000000 79.7 infA_p5 infA 5 TTGCGAAAACTTGCTCGAAC AAACAGTTCGAGTAGCTGCT 20 20 45.0 45.0 57.9 57.2 0.0 3.1 0.921624 92920 93228 1255-1372 1.000000 79.7 infA-rps8_p1 infA-rps8 1 GACTAGAAACGCTCCACCAG AGCAGCACCTAATATGCCTC 20 20 55.0 50.0 58.0 57.4 0.0 0.0 0.560250 93229 93572 1049-1185 1.000000 83.0 infA-rps8_p2 infA-rps8 2 GACTAGAAACGCTCCACCAG GCAGCACCTAATATGCCTCT 20 20 55.0 50.0 58.0 57.4 0.0 0.0 0.560250 93229 93572 1048-1184 1.000000 83.0 infA-rps8_p3 infA-rps8 3 GGAAATCCTGCGATGACTGT AGCAGCACCTAATATGCCTC 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.587758 93229 93572 1030-1166 1.000000 82.7 infA-rps8_p4 infA-rps8 4 GGAAATCCTGCGATGACTGT GCAGCACCTAATATGCCTCT 20 20 50.0 50.0 58.0 57.4 0.0 0.0 0.587758 93229 93572 1029-1165 1.000000 82.7 infA-rps8_p5 infA-rps8 5 ATTTTGCGAACAGAAGCACG GCAGCACCTAATATGCCTCT 20 20 45.0 50.0 58.0 57.4 0.0 0.0 0.594476 93229 93572 1301-1437 1.000000 82.3 rpl22-rps19_p1 rpl22-rps19 1 AACCACGAAGTTGATGAGCT TTCCAGGGACATGCGAAAAA 20 20 45.0 45.0 57.4 58.0 0.0 0.0 0.562537 97143 97195 219-224 1.000000 78.0 rpl22-rps19_p2 rpl22-rps19 2 AACCACGAAGTTGATGAGCT TTTCCAGGGACATGCGAAAA 20 20 45.0 45.0 57.4 58.0 0.0 0.0 0.562537 97143 97195 220-225 1.000000 78.0 rpl22-rps19_p3 rpl22-rps19 3 AACCACGAAGTTGATGAGCT TTTTCCAGGGACATGCGAAA 20 20 45.0 45.0 57.4 58.0 0.0 0.0 0.562537 97143 97195 221-226 1.000000 78.0 rpl22-rps19_p4 rpl22-rps19 4 AACCACGAAGTTGATGAGCT TCCATTTTCCAGGGACATGC 20 20 45.0 50.0 57.4 58.1 0.0 0.0 0.699526 97143 97195 225-230 1.000000 76.9 rpl22-rps19_p5 rpl22-rps19 5 AACCACGAAGTTGATGAGCT ATTTTCCAGGGACATGCGAA 20 20 45.0 45.0 57.4 57.8 0.0 0.0 0.765206 97143 97195 222-227 1.000000 76.4 trnV-GAC-LK118_pgr004_p1 trnV-GAC-LK118_pgr004 1 ACCTTGACGTGGTGAAAGTC TCCCAAGGGCAGGTTACTTA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.098304 113791 114640 979-1000 1.000000 83.1 trnV-GAC-LK118_pgr004_p2 trnV-GAC-LK118_pgr004 2 CCTTGACGTGGTGAAAGTCA TCCCAAGGGCAGGTTACTTA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.099665 113791 114640 978-999 1.000000 83.1 trnV-GAC-LK118_pgr004_p3 trnV-GAC-LK118_pgr004 3 ACCTTGACGTGGTGAAAGTC CCCAAGGGCAGGTTACTTAC 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.174812 113791 114640 978-999 1.000000 82.5 trnV-GAC-LK118_pgr004_p4 trnV-GAC-LK118_pgr004 4 CCTTGACGTGGTGAAAGTCA CCCAAGGGCAGGTTACTTAC 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.176173 113791 114640 977-998 1.000000 82.5 trnV-GAC-LK118_pgr004_p5 trnV-GAC-LK118_pgr004 5 ACCTTGACGTGGTGAAAGTC GGGCAGGTTACTTACGCATT 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.304065 113791 114640 973-994 1.000000 81.5 LK118_pgr004-trnI-GAU_p1 LK118_pgr004-trnI-GAU 1 GACCGGAGTGAAGTCGTAAC GCAACGACGCAATTATCAGG 20 20 55.0 50.0 58.0 57.9 9.5 0.0 0.116665 116124 116553 540-545 1.000000 81.1 LK118_pgr004-trnI-GAU_p2 LK118_pgr004-trnI-GAU 2 GACCGGAGTGAAGTCGTAAC CGCAACGACGCAATTATCAG 20 20 55.0 50.0 58.0 58.3 9.5 0.0 0.307010 116124 116553 541-546 1.000000 79.6 LK118_pgr004-trnI-GAU_p3 LK118_pgr004-trnI-GAU 3 GACCGGAGTGAAGTCGTAAC AACGACGCAATTATCAGGGG 20 20 55.0 50.0 58.0 58.3 9.5 0.0 0.361819 116124 116553 538-543 1.000000 79.2 LK118_pgr004-trnI-GAU_p4 LK118_pgr004-trnI-GAU 4 CAAGGTAGCCGTACTGGAAG GCAACGACGCAATTATCAGG 20 20 55.0 50.0 57.7 57.9 7.8 0.0 0.386405 116124 116553 521-526 1.000000 79.0 LK118_pgr004-trnI-GAU_p5 LK118_pgr004-trnI-GAU 5 AAGTCGTAACAAGGTAGCCG GCAACGACGCAATTATCAGG 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.450091 116124 116553 530-535 1.000000 78.5 LK118_pgr003-LK118_pgr002_p1 LK118_pgr003-LK118_pgr002 1 CCACCTCAAGATGAGTGCTC TCACTGCACTTCCACTTGAC 20 20 55.0 50.0 58.0 58.0 6.6 0.0 0.067796 121427 121428 81-81 1.000000 80.4 LK118_pgr003-LK118_pgr002_p2 LK118_pgr003-LK118_pgr002 2 GAAGCCCACCTCAAGATGAG TCACTGCACTTCCACTTGAC 20 20 55.0 50.0 58.0 58.0 0.3 0.0 0.081971 121427 121428 86-86 1.000000 80.3 LK118_pgr003-LK118_pgr002_p3 LK118_pgr003-LK118_pgr002 3 GCGGATAATTGCTGAATGCC TCACTGCACTTCCACTTGAC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.102535 121427 121428 115-115 1.000000 79.9 LK118_pgr003-LK118_pgr002_p4 LK118_pgr003-LK118_pgr002 4 GTACCAGTTATCGTGCCCTC TCACTGCACTTCCACTTGAC 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.266920 121427 121428 162-162 1.000000 78.4 LK118_pgr003-LK118_pgr002_p5 LK118_pgr003-LK118_pgr002 5 CCACCTCAAGATGAGTGCTC CACTGCACTTCCACTTGACA 20 20 55.0 50.0 58.0 58.3 6.6 0.0 0.354119 121427 121428 80-80 1.000000 78.2 ndhJ-chlN_p1 ndhJ-chlN 1 GTTGGATTGGGTGGCCTTTA ACTTGGGTCCAACCACTTTG 20 20 50.0 50.0 58.1 58.2 3.3 0.0 0.292980 130009 130746 813-841 1.000000 81.7 ndhJ-chlN_p2 ndhJ-chlN 2 TTGGATTGGGTGGCCTTTAC ACTTGGGTCCAACCACTTTG 20 20 50.0 50.0 58.1 58.2 3.3 0.0 0.292980 130009 130746 812-840 1.000000 81.7 ndhJ-chlN_p3 ndhJ-chlN 3 GTTGGATTGGGTGGCCTTTA ATTCATGGGTTTGCCAATGC 20 20 50.0 45.0 58.1 57.6 3.3 0.0 0.474961 130009 130746 889-917 1.000000 79.9 ndhJ-chlN_p4 ndhJ-chlN 4 TTGGATTGGGTGGCCTTTAC ATTCATGGGTTTGCCAATGC 20 20 50.0 45.0 58.1 57.6 3.3 0.0 0.474961 130009 130746 888-916 1.000000 79.9 ndhJ-chlN_p5 ndhJ-chlN 5 TTGGATTGGGTGGCCTTTAC CCAGATTCATGGGTTTGCCA 20 20 50.0 50.0 58.1 58.4 3.3 0.0 0.508997 130009 130746 892-920 1.000000 79.6