primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnR-UCU-trnG-GCC_p1 trnR-UCU-trnG-GCC 1 AGAAGACCTCTGTCCTATCCA AGCCTTCCAAGCTAACGATG 21 20 47.6 50.0 56.9 58.0 0.0 0.0 2.081443 52315 52578 338-344 1.000000 69.2 trnR-UCU-trnG-GCC_p2 trnR-UCU-trnG-GCC 2 AGAAGACCTCTGTCCTATCCA CCTAGCCTTCCAAGCTAACG 21 20 47.6 55.0 56.9 58.1 0.0 0.0 2.110280 52315 52578 341-347 1.000000 68.9 trnR-UCU-trnG-GCC_p3 trnR-UCU-trnG-GCC 3 AGGTTTAGAAGACCTCTGTCCT AGCCTTCCAAGCTAACGATG 22 20 45.5 50.0 57.9 58.0 0.0 0.0 2.164771 52315 52578 344-350 1.000000 68.4 trnR-UCU-trnG-GCC_p4 trnR-UCU-trnG-GCC 4 AGGTTTAGAAGACCTCTGTCCT CCTAGCCTTCCAAGCTAACG 22 20 45.5 55.0 57.9 58.1 0.0 0.0 2.193608 52315 52578 347-353 1.000000 68.2 trnR-UCU-trnG-GCC_p5 trnR-UCU-trnG-GCC 5 AGAAGACCTCTGTCCTATCCA CCCTAGCCTTCCAAGCTAAC 21 20 47.6 55.0 56.9 57.7 0.0 0.0 2.385293 52315 52578 342-348 1.000000 66.7 psbK-trnQ-UUG_p1 psbK-trnQ-UUG 1 TAGGCTTCGGGCAATTTAGC GACCAAAACCCGTTGCCTTA 20 20 50.0 50.0 58.3 58.7 0.0 0.0 1.003941 54841 55287 574-583 1.000000 74.9 psbK-trnQ-UUG_p2 psbK-trnQ-UUG 2 CGTAGGCTTCGGGCAATTTA GACCAAAACCCGTTGCCTTA 20 20 50.0 50.0 58.3 58.7 5.5 0.0 1.020499 54841 55287 576-585 1.000000 74.7 psbK-trnQ-UUG_p3 psbK-trnQ-UUG 3 TAGGCTTCGGGCAATTTAGC GAATAGCGGGACCAAAACCC 20 20 50.0 55.0 58.3 58.9 0.0 0.0 1.223938 54841 55287 583-592 1.000000 73.1 psbK-trnQ-UUG_p4 psbK-trnQ-UUG 4 CGTAGGCTTCGGGCAATTTA GAATAGCGGGACCAAAACCC 20 20 50.0 55.0 58.3 58.9 5.5 0.0 1.240497 54841 55287 585-594 1.000000 72.9 psbK-trnQ-UUG_p5 psbK-trnQ-UUG 5 TAGGCTTCGGGCAATTTAGC ACCAAAACCCGTTGCCTTAC 20 20 50.0 50.0 58.3 59.0 0.0 0.0 1.290092 54841 55287 573-582 1.000000 72.6 ycf1_p1 ycf1 1 GAGCTACTGAGGAACAACGG CTTTATTCGTTGGGGCCGTA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.029334 106305 106793 1389-1389 0.500000 59.8 ycf1_p2 ycf1 2 GAGCTACTGAGGAACAACGG TACTTTATTCGTTGGGGCCG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.029334 106305 106793 1391-1391 0.500000 59.8 ycf1_p3 ycf1 3 GAGCTACTGAGGAACAACGG TTTATTCGTTGGGGCCGTAG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.029334 106305 106793 1388-1388 0.500000 59.8 ycf1_p4 ycf1 4 GGTTAAATAGCCCCGGACTG CTTTATTCGTTGGGGCCGTA 20 20 55.0 50.0 58.0 58.0 0.7 0.0 0.063831 106305 106793 1654-1654 0.500000 59.5 ycf1_p5 ycf1 5 GGTTAAATAGCCCCGGACTG TTTATTCGTTGGGGCCGTAG 20 20 55.0 50.0 58.0 58.0 0.7 0.0 0.063831 106305 106793 1653-1653 0.500000 59.5 ndhF_p1 ndhF 1 TCGGCAATAATCACAAAAACGT GTACGCTTTTTGGGAACTGC 22 20 36.4 50.0 57.5 58.0 0.0 0.0 2.537517 106758 109013 2941-2941 0.500000 39.7 ndhF_p2 ndhF 2 CGGCAATAATCACAAAAACGT GTACGCTTTTTGGGAACTGC 21 20 38.1 50.0 56.1 58.0 0.0 0.0 2.980095 106758 109013 2940-2940 0.500000 36.2 ndhF_p3 ndhF 3 CAGTTCTTCGGCAATAATCACA GTACGCTTTTTGGGAACTGC 22 20 40.9 50.0 57.1 58.0 0.0 0.0 2.991245 106758 109013 2948-2948 0.500000 36.1 ndhF_p4 ndhF 4 AACTGTCATAGCTCTACCCT GTACGCTTTTTGGGAACTGC 20 20 45.0 50.0 54.9 58.0 0.0 0.0 3.103296 106758 109013 2979-2979 0.500000 35.2 ndhF_p5 ndhF 5 TTCGGCAATAATCACAAAAACGT GTACGCTTTTTGGGAACTGC 23 20 34.8 50.0 58.1 58.0 0.0 0.0 3.185072 106758 109013 2942-2942 0.500000 34.5 ndhF-rpl32_p1 ndhF-rpl32 1 GATTTAGCGACTGAGCCACA GTACGCTTTTTGGGAACTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.056428 109014 109529 1261-1261 0.500000 59.5 ndhF-rpl32_p2 ndhF-rpl32 2 GATTTAGCGACTGAGCCACA TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.134422 109014 109529 1895-1895 0.500000 58.9 ndhF-rpl32_p3 ndhF-rpl32 3 GATTTAGCGACTGAGCCACA AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.195149 109014 109529 1888-1888 0.500000 58.4 ndhF-rpl32_p4 ndhF-rpl32 4 ACATGAAGAGGGAATTGGGC GTACGCTTTTTGGGAACTGC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.196256 109014 109529 1282-1282 0.500000 58.4 ndhF-rpl32_p5 ndhF-rpl32 5 GATTTAGCGACTGAGCCACA CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.206440 109014 109529 1893-1893 0.500000 58.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GCAGTTCCCAAAAAGCGTAC GAAGTAGCAAAGCCTTGGGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.135225 109692 110147 1135-1135 0.500000 58.9 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GCAGTTCCCAAAAAGCGTAC TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.170560 109692 110147 654-654 0.500000 58.6 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GCAGTTCCCAAAAAGCGTAC AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.231287 109692 110147 647-647 0.500000 58.1 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GCAGTTCCCAAAAAGCGTAC AAGACCCGAAGTAGCAAAGC 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.236599 109692 110147 1142-1142 0.500000 58.1 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GCAGTTCCCAAAAAGCGTAC CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.242578 109692 110147 652-652 0.500000 58.1 ccsA_p1 ccsA 1 TAGACACGCTGCTCTTAGGA TTTCGGCTGACAAGGTTGAA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.169839 110318 111295 1446-1446 0.500000 58.6 ccsA_p2 ccsA 2 TAGACACGCTGCTCTTAGGA TTTTCGGCTGACAAGGTTGA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.169839 110318 111295 1447-1447 0.500000 58.6 ccsA_p3 ccsA 3 AAATTGGTAGACACGCTGCT TTTCGGCTGACAAGGTTGAA 20 20 45.0 45.0 57.8 58.0 0.0 0.0 0.230565 110318 111295 1453-1453 0.500000 58.2 ccsA_p4 ccsA 4 AAATTGGTAGACACGCTGCT TTTTCGGCTGACAAGGTTGA 20 20 45.0 45.0 57.8 58.0 0.0 0.0 0.230565 110318 111295 1454-1454 0.500000 58.2 ccsA_p5 ccsA 5 GTAGACACGCTGCTCTTAGG TTTCGGCTGACAAGGTTGAA 20 20 55.0 45.0 57.8 58.0 0.0 0.0 0.241856 110318 111295 1447-1447 0.500000 58.1 ndhD_p1 ndhD 1 GATCGTTGGGGTTACCGTAC AAATTGCTTCTGCCCCAAGA 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.087448 111569 113068 2340-2340 0.500000 59.3 ndhD_p2 ndhD 2 GATCGTTGGGGTTACCGTAC AATTGCTTCTGCCCCAAGAA 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.087448 111569 113068 2339-2339 0.500000 59.3 ndhD_p3 ndhD 3 GATCGTTGGGGTTACCGTAC AAACAACTCGAAGCATGGGT 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.092182 111569 113068 2238-2238 0.500000 59.3 ndhD_p4 ndhD 4 GATCGTTGGGGTTACCGTAC GGCATGAAACAACTCGAAGC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.104335 111569 113068 2244-2244 0.500000 59.2 ndhD_p5 ndhD 5 CTAATGAGGCATGGGGATCG AATTGCTTCTGCCCCAAGAA 20 20 55.0 45.0 57.9 58.0 0.0 0.0 0.119016 111569 113068 2263-2263 0.500000 59.0 psaC_p1 psaC 1 TTTCTTTCCACCCCACATGG ATCGGACCCGCTATTGTTTC 20 20 50.0 50.0 58.0 58.1 0.0 3.1 0.058777 113196 113441 1238-1238 0.500000 59.5 psaC_p2 psaC 2 AAAACAGAACTTCCCGCAGT ATCGGACCCGCTATTGTTTC 20 20 45.0 50.0 57.9 58.1 0.0 3.1 0.103317 113196 113441 1291-1291 0.500000 59.2 psaC_p3 psaC 3 CGGTTGAGCTGCTAAGGTAG ATCGGACCCGCTATTGTTTC 20 20 55.0 50.0 58.1 58.1 0.2 3.1 0.122640 113196 113441 1079-1079 0.500000 59.0 psaC_p4 psaC 4 TTTCTTTCCACCCCACATGG CTATGGGTTGATCACGAGCC 20 20 50.0 55.0 58.0 58.1 0.0 8.4 0.137162 113196 113441 1410-1410 0.500000 58.9 psaC_p5 psaC 5 GTAACCGGTTGAGCTGCTAA ATCGGACCCGCTATTGTTTC 20 20 50.0 50.0 57.9 58.1 30.1 3.1 0.139484 113196 113441 1084-1084 0.500000 58.9 ndhE_p1 ndhE 1 TCTTGGGGCAGAAGCAATTT TGTCGTGACTCGCCAATAAG 20 20 45.0 50.0 58.0 58.0 0.0 1.2 0.023211 113746 114051 990-990 0.500000 59.8 ndhE_p2 ndhE 2 TTCTTGGGGCAGAAGCAATT TGTCGTGACTCGCCAATAAG 20 20 45.0 50.0 58.0 58.0 0.0 1.2 0.023211 113746 114051 991-991 0.500000 59.8 ndhE_p3 ndhE 3 ACCCATGCTTCGAGTTGTTT TGTCGTGACTCGCCAATAAG 20 20 45.0 50.0 58.0 58.0 0.0 1.2 0.027944 113746 114051 1092-1092 0.500000 59.8 ndhE_p4 ndhE 4 GCTTCGAGTTGTTTCATGCC TGTCGTGACTCGCCAATAAG 20 20 50.0 50.0 58.0 58.0 0.0 1.2 0.040097 113746 114051 1086-1086 0.500000 59.7 ndhE_p5 ndhE 5 TCTTGGGGCAGAAGCAATTT ACGTGGGCGCTATTAATGTT 20 20 45.0 45.0 58.0 58.0 0.0 7.6 0.046690 113746 114051 1306-1306 0.500000 59.6 ndhG_p1 ndhG 1 GAAACAATAGCGGGTCCGAT AATCAAATTGCTTTGGGCCG 20 20 50.0 45.0 58.1 57.9 14.1 0.0 0.148214 114281 114811 1541-1541 0.500000 58.8 ndhG_p2 ndhG 2 GAAACAATAGCGGGTCCGAT CGACTTATGATCGCCACGAA 20 20 50.0 50.0 58.1 58.2 14.1 0.0 0.215414 114281 114811 1570-1570 0.500000 58.3 ndhG_p3 ndhG 3 GAAACAATAGCGGGTCCGAT TTCGACTTATGATCGCCACG 20 20 50.0 50.0 58.1 58.2 14.1 0.0 0.215414 114281 114811 1572-1572 0.500000 58.3 ndhG_p4 ndhG 4 GGCTCGTGATCAACCCATAG AATCAAATTGCTTTGGGCCG 20 20 55.0 45.0 58.1 57.9 0.0 0.0 0.226600 114281 114811 1369-1369 0.500000 58.2 ndhG_p5 ndhG 5 GGCTCGTGATCAACCCATAG CGACTTATGATCGCCACGAA 20 20 55.0 50.0 58.1 58.2 0.0 0.0 0.293799 114281 114811 1398-1398 0.500000 57.6 ndhG-ndhI_p1 ndhG-ndhI 1 AACATTAATAGCGCCCACGT AATCAAATTGCTTTGGGCCG 20 20 45.0 45.0 58.0 57.9 2.3 0.0 0.130360 114812 115272 752-752 0.500000 59.0 ndhG-ndhI_p2 ndhG-ndhI 2 AATCATGTAGTGGTTCGGGC AATCAAATTGCTTTGGGCCG 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.136067 114812 115272 564-564 0.500000 58.9 ndhG-ndhI_p3 ndhG-ndhI 3 AACATTAATAGCGCCCACGT CGACTTATGATCGCCACGAA 20 20 45.0 50.0 58.0 58.2 2.3 0.0 0.197560 114812 115272 781-781 0.500000 58.4 ndhG-ndhI_p4 ndhG-ndhI 4 AACATTAATAGCGCCCACGT TTCGACTTATGATCGCCACG 20 20 45.0 50.0 58.0 58.2 2.3 0.0 0.197560 114812 115272 783-783 0.500000 58.4 ndhG-ndhI_p5 ndhG-ndhI 5 AATCATGTAGTGGTTCGGGC CGACTTATGATCGCCACGAA 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.203266 114812 115272 593-593 0.500000 58.4 ndhI_p1 ndhI 1 AACATTAATAGCGCCCACGT TGATTTACCGGAAGCGGAAG 20 20 45.0 50.0 58.0 58.0 2.3 9.5 0.051222 115273 115758 1644-1644 0.500000 59.6 ndhI_p2 ndhI 2 AATCATGTAGTGGTTCGGGC TGATTTACCGGAAGCGGAAG 20 20 50.0 50.0 58.0 58.0 0.0 9.5 0.056929 115273 115758 1456-1456 0.500000 59.5 ndhI_p3 ndhI 3 AACATTAATAGCGCCCACGT TTTACCGGAAGCGGAAGAAG 20 20 45.0 50.0 58.0 57.9 2.3 9.5 0.121630 115273 115758 1641-1641 0.500000 59.0 ndhI_p4 ndhI 4 AATCATGTAGTGGTTCGGGC TTTACCGGAAGCGGAAGAAG 20 20 50.0 50.0 58.0 57.9 0.0 9.5 0.127336 115273 115758 1453-1453 0.500000 59.0 ndhI_p5 ndhI 5 AACATTAATAGCGCCCACGT GGCCCGGTCCTTAGATTTTT 20 20 45.0 50.0 58.0 57.9 2.3 0.0 0.172004 115273 115758 1894-1894 0.500000 58.6 ndhI-ndhA_p1 ndhI-ndhA 1 CGGCCCAAAGCAATTTGATT TGATTTACCGGAAGCGGAAG 20 20 45.0 50.0 57.9 58.0 0.0 9.5 0.116222 115759 115839 912-912 0.500000 59.1 ndhI-ndhA_p2 ndhI-ndhA 2 CGTGGCGATCATAAGTCGAA TGATTTACCGGAAGCGGAAG 20 20 50.0 50.0 58.2 58.0 0.0 9.5 0.183421 115759 115839 881-881 0.500000 58.5 ndhI-ndhA_p3 ndhI-ndhA 3 TTCGTGGCGATCATAAGTCG TGATTTACCGGAAGCGGAAG 20 20 50.0 50.0 58.2 58.0 0.0 9.5 0.183421 115759 115839 883-883 0.500000 58.5 ndhI-ndhA_p4 ndhI-ndhA 4 CGGCCCAAAGCAATTTGATT TTTACCGGAAGCGGAAGAAG 20 20 45.0 50.0 57.9 57.9 0.0 9.5 0.186629 115759 115839 909-909 0.500000 58.5 ndhI-ndhA_p5 ndhI-ndhA 5 ACCAATGTACCTTGCAGCTC TGATTTACCGGAAGCGGAAG 20 20 50.0 50.0 58.2 58.0 5.4 9.5 0.192157 115759 115839 550-550 0.500000 58.5 ndhA_p1 ndhA 1 CGGCCCAAAGCAATTTGATT TTCGTCCACCGGGTTTTATC 20 20 45.0 50.0 57.9 57.9 0.0 6.3 0.195359 115840 118163 2959-2959 0.500000 58.4 ndhA_p2 ndhA 2 CGTGGCGATCATAAGTCGAA TTCGTCCACCGGGTTTTATC 20 20 50.0 50.0 58.2 57.9 0.0 6.3 0.262559 115840 118163 2928-2928 0.500000 57.9 ndhA_p3 ndhA 3 TTCGTGGCGATCATAAGTCG TTCGTCCACCGGGTTTTATC 20 20 50.0 50.0 58.2 57.9 0.0 6.3 0.262559 115840 118163 2930-2930 0.500000 57.9 ndhA_p4 ndhA 4 ACCAATGTACCTTGCAGCTC TTCGTCCACCGGGTTTTATC 20 20 50.0 50.0 58.2 57.9 5.4 6.3 0.271295 115840 118163 2597-2597 0.500000 57.8 ndhA_p5 ndhA 5 GACCAATGTACCTTGCAGCT TTCGTCCACCGGGTTTTATC 20 20 50.0 50.0 58.2 57.9 5.4 6.3 0.271295 115840 118163 2598-2598 0.500000 57.8 ndhH_p1 ndhH 1 TCAGGTCCAATACGCTGTTG GAAAACCCAGGATCGGTTGA 20 20 50.0 50.0 57.9 57.8 0.0 4.5 0.287508 118165 119346 1701-1701 0.500000 57.7 ndhH_p2 ndhH 2 TCAGGTCCAATACGCTGTTG AGAAAACCCAGGATCGGTTG 20 20 50.0 50.0 57.9 57.8 0.0 4.5 0.293679 118165 119346 1702-1702 0.500000 57.7 ndhH_p3 ndhH 3 CAACGAATCGCACGTAGAGA GAAAACCCAGGATCGGTTGA 20 20 50.0 50.0 58.1 57.8 1.2 4.5 0.303023 118165 119346 2073-2073 0.500000 57.6 ndhH_p4 ndhH 4 CTCAACGAATCGCACGTAGA GAAAACCCAGGATCGGTTGA 20 20 50.0 50.0 58.1 57.8 1.2 4.5 0.303023 118165 119346 2075-2075 0.500000 57.6 ndhH_p5 ndhH 5 TCAACGAATCGCACGTAGAG GAAAACCCAGGATCGGTTGA 20 20 50.0 50.0 58.1 57.8 1.2 4.5 0.303023 118165 119346 2074-2074 0.500000 57.6 rps15-ycf1_p1 rps15-ycf1 1 AACACCATGCATTGATGGGT GAACCAGTTCGCCTGTCTAG 20 20 45.0 55.0 58.1 58.0 8.9 0.0 0.060954 119719 120114 1377-1377 0.500000 59.5 rps15-ycf1_p2 rps15-ycf1 2 TAATCGTTGCCGTTTTCCCA GAACCAGTTCGCCTGTCTAG 20 20 45.0 55.0 58.1 58.0 0.0 0.0 0.108786 119719 120114 1119-1119 0.500000 59.1 rps15-ycf1_p3 rps15-ycf1 3 AACACCATGCATTGATGGGT TTATCCCCTAGGCGTCGTAG 20 20 45.0 55.0 58.1 58.1 8.9 2.1 0.157032 119719 120114 1152-1152 0.500000 58.7 rps15-ycf1_p4 rps15-ycf1 4 TCAACCGATCCTGGGTTTTC GAACCAGTTCGCCTGTCTAG 20 20 50.0 55.0 57.8 58.0 1.1 0.0 0.196532 119719 120114 998-998 0.500000 58.4 rps15-ycf1_p5 rps15-ycf1 5 CAACCGATCCTGGGTTTTCT GAACCAGTTCGCCTGTCTAG 20 20 50.0 55.0 57.8 58.0 1.1 0.0 0.202704 119719 120114 997-997 0.500000 58.4 ycf1_p1 ycf1 1 TTCTTTTCCCTGCCCAATCC TCTTCGAATGACAACACGCA 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.203426 120978 121097 491-491 0.500000 58.4 ycf1_p2 ycf1 2 CTACGACGCCTAGGGGATAA TCTTCGAATGACAACACGCA 20 20 55.0 45.0 58.1 58.1 31.0 0.0 0.239026 120978 121097 1037-1037 0.500000 58.1 ycf1_p3 ycf1 3 TCCTTAAGCCCGGAAGAGTT TCTTCGAATGACAACACGCA 20 20 50.0 45.0 58.3 58.1 0.7 0.0 0.487670 120978 121097 754-754 0.500000 56.1 ycf1_p4 ycf1 4 TTCCTTAAGCCCGGAAGAGT TCTTCGAATGACAACACGCA 20 20 50.0 45.0 58.3 58.1 0.7 0.0 0.487670 120978 121097 755-755 0.500000 56.1 ycf1_p5 ycf1 5 CCATTCTTTTCCCTGCCCAA TCTTCGAATGACAACACGCA 20 20 50.0 45.0 58.4 58.1 0.0 0.0 0.497307 120978 121097 494-494 0.500000 56.0