primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 146 333 252-258 1.000000 85.6 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.208010 146 333 266-272 1.000000 85.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 146 333 265-271 1.000000 85.2 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 146 333 267-273 1.000000 85.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACAATCCACTGCCTT TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 146 333 272-278 1.000000 85.0 psbA_p1 psbA 1 TGCTCCTTTATTTTCAAAAACTCGT TTGTGTACTTGGGAGTCCCT 25 20 32.0 50.0 58.2 57.9 0.0 28.7 5.310704 334 1395 1153-1153 1.000000 40.2 psbA_p2 psbA 2 TGCTCCTTTATTTTCAAAAACTCG TTGTGTACTTGGGAGTCCCT 24 20 33.3 50.0 56.7 57.9 0.0 28.7 5.418638 334 1395 1153-1153 1.000000 40.2 psbA_p3 psbA 3 GCTCCTTTATTTTCAAAAACTCGT TTGTGTACTTGGGAGTCCCT 24 20 33.3 50.0 56.7 57.9 0.0 28.7 5.420507 334 1395 1152-1152 1.000000 40.2 psbA_p4 psbA 4 TGCTCCTTTATTTTCAAAAACTCGT ACTTGGGAGTCCCTGATGAT 25 20 32.0 50.0 58.2 57.7 0.0 28.7 5.475433 334 1395 1147-1147 1.000000 40.2 psbA_p5 psbA 5 TGCTCCTTTATTTTCAAAAACTCGT GTGTACTTGGGAGTCCCTGA 25 20 32.0 55.0 58.2 58.4 0.0 28.7 5.557509 334 1395 1151-1151 1.000000 40.2 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA TTTGGTCCCGGTGATCAAAG 20 20 45.0 50.0 58.1 58.1 8.1 20.7 0.235037 6136 7706 1661-1902 1.000000 81.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA CCGGTGATCAAAGGTTCGAA 20 20 45.0 50.0 58.1 58.2 8.1 0.0 0.335990 6136 7706 1654-1895 1.000000 80.6 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA AATAGACAGAATGGGGCGTG 20 20 45.0 50.0 58.1 57.7 8.1 0.0 0.471387 6136 7706 1703-1944 1.000000 79.5 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA GTTTTGGTCCCGGTGATCAA 20 20 45.0 50.0 58.1 58.4 8.1 12.9 0.527805 6136 7706 1663-1904 1.000000 79.1 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA GTCCCGGTGATCAAAGGTTC 20 20 45.0 55.0 58.1 58.5 8.1 14.4 0.689299 6136 7706 1657-1898 1.000000 77.8 trnS-GCU-trnR-UCU_p1 trnS-GCU-trnR-UCU 1 AGCAAAACGGAAAGAGAGGG TGTCCACTAAATTGCGTCCA 20 20 50.0 45.0 58.1 57.4 0.0 0.0 0.655039 9036 10611 1755-1850 1.000000 76.7 trnS-GCU-trnR-UCU_p2 trnS-GCU-trnR-UCU 2 GCAAAACGGAAAGAGAGGGA TGTCCACTAAATTGCGTCCA 20 20 50.0 45.0 58.1 57.4 0.0 0.0 0.660390 9036 10611 1754-1849 1.000000 76.7 trnS-GCU-trnR-UCU_p3 trnS-GCU-trnR-UCU 3 ACGGAAAGAGAGGGATTCGA TGTCCACTAAATTGCGTCCA 20 20 50.0 45.0 58.2 57.4 0.0 0.0 0.703947 9036 10611 1749-1844 1.000000 76.3 trnS-GCU-trnR-UCU_p4 trnS-GCU-trnR-UCU 4 AGCAAAACGGAAAGAGAGGG GTGTCCACTAAATTGCGTCC 20 20 50.0 50.0 58.1 57.1 0.0 0.0 0.996747 9036 10611 1756-1851 1.000000 74.0 trnS-GCU-trnR-UCU_p5 trnS-GCU-trnR-UCU 5 GCAAAACGGAAAGAGAGGGA GTGTCCACTAAATTGCGTCC 20 20 50.0 50.0 58.1 57.1 0.0 0.0 1.002097 9036 10611 1755-1850 1.000000 73.9 atpF_p1 atpF 1 AGTAAGCCTCACTCACTGGT AAAGTATCGCGAGACAACCC 20 20 50.0 50.0 58.0 58.0 0.0 32.7 0.022875 12354 12908 1660-1723 1.000000 81.3 atpF_p2 atpF 2 TACCTGTTTGCCTATCCCCA AAAGTATCGCGAGACAACCC 20 20 50.0 50.0 58.0 58.0 0.0 32.7 0.031942 12354 12908 1873-1936 1.000000 81.1 atpF_p3 atpF 3 AGTAAGCCTCACTCACTGGT CCCAGGCGGATGGAAAAATA 20 20 50.0 50.0 58.0 57.9 0.0 3.0 0.082803 12354 12908 1642-1705 1.000000 80.9 atpF_p4 atpF 4 CGGCTTTAATGGTTGCCATG AAAGTATCGCGAGACAACCC 20 20 50.0 50.0 58.1 58.0 1.0 32.7 0.080741 12354 12908 1366-1429 1.000000 80.8 atpF_p5 atpF 5 TACCTGTTTGCCTATCCCCA CCCAGGCGGATGGAAAAATA 20 20 50.0 50.0 58.0 57.9 0.0 3.0 0.091870 12354 12908 1855-1918 1.000000 80.6 petN-psbM_p1 petN-psbM 1 TGTCACTCGTAGTATGGGGA ATTGCTACTGCGCTGTTCAT 20 20 50.0 45.0 57.2 58.3 0.0 25.3 1.070075 27985 28689 816-821 1.000000 77.0 petN-psbM_p2 petN-psbM 2 ACATTTTCCCTGTCACTCGT ATTGCTACTGCGCTGTTCAT 20 20 45.0 45.0 57.1 58.3 0.0 25.3 1.188065 27985 28689 826-831 1.000000 76.0 petN-psbM_p3 petN-psbM 3 TGTCACTCGTAGTATGGGGA TATTGCTACTGCGCTGTTCA 20 20 50.0 45.0 57.2 57.6 0.0 25.3 1.191281 27985 28689 817-822 1.000000 76.0 petN-psbM_p4 petN-psbM 4 TGTCACTCGTAGTATGGGGA TTGCTACTGCGCTGTTCATT 20 20 50.0 45.0 57.2 58.5 0.0 25.3 1.290168 27985 28689 815-820 1.000000 75.3 petN-psbM_p5 petN-psbM 5 ACATTTTCCCTGTCACTCGT TATTGCTACTGCGCTGTTCA 20 20 45.0 45.0 57.1 57.6 0.0 25.3 1.309271 27985 28689 827-832 1.000000 75.0 trnY-GUA-trnE-UUC_p1 trnY-GUA-trnE-UUC 1 CGAATTTACAGTCCGTCCCC AAGTATGCCCCCATCGTCTA 20 20 55.0 50.0 58.4 57.9 0.0 0.0 0.448606 30366 30424 181-181 1.000000 77.3 trnY-GUA-trnE-UUC_p2 trnY-GUA-trnE-UUC 2 ACGAATTTACAGTCCGTCCC AAGTATGCCCCCATCGTCTA 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.472283 30366 30424 182-182 1.000000 77.1 trnY-GUA-trnE-UUC_p3 trnY-GUA-trnE-UUC 3 CGAATTTACAGTCCGTCCCC CTCTCTTTCAAGGAGGCAGC 20 20 55.0 55.0 58.4 58.3 0.0 0.0 0.614884 30366 30424 147-147 1.000000 76.2 trnY-GUA-trnE-UUC_p4 trnY-GUA-trnE-UUC 4 ATCATTTCATGGCGGATCCG AAGTATGCCCCCATCGTCTA 20 20 50.0 50.0 58.5 57.9 30.0 0.0 0.570076 30366 30424 250-250 1.000000 76.1 trnY-GUA-trnE-UUC_p5 trnY-GUA-trnE-UUC 5 CGAATTTACAGTCCGTCCCC TCGTCTAGTGGTTCAGGACA 20 20 55.0 50.0 58.4 57.7 0.0 0.0 0.633035 30366 30424 168-168 1.000000 75.9 psbZ-trnG-UCC_p1 psbZ-trnG-UCC 1 CTTCTCCTGATGGTTGGGTG CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 57.9 57.8 0.0 1.1 0.289634 36175 36783 763-853 1.000000 83.1 psbZ-trnG-UCC_p2 psbZ-trnG-UCC 2 TTGCTTCTCCTGATGGTTGG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.374855 36175 36783 766-856 1.000000 82.4 psbZ-trnG-UCC_p3 psbZ-trnG-UCC 3 TTCTCCTGATGGTTGGGTGA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.3 57.8 0.0 1.1 0.428804 36175 36783 762-852 1.000000 82.0 psbZ-trnG-UCC_p4 psbZ-trnG-UCC 4 CTTCTCCTGATGGTTGGGTG TAAATACATTGCCTGGGCGG 20 20 55.0 50.0 57.9 58.3 0.0 7.1 0.433447 36175 36783 802-892 1.000000 81.7 psbZ-trnG-UCC_p5 psbZ-trnG-UCC 5 TCCTGATGGTTGGGTGAGTA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.7 57.8 0.0 1.1 0.505514 36175 36783 759-849 1.000000 81.4 trnfM-CAU-rps14_p1 trnfM-CAU-rps14 1 AAGGTTATGAGCCTTGCGAG TTGGGCTATCCGGGCATATA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.070129 37076 37243 279-288 1.000000 83.4 trnfM-CAU-rps14_p2 trnfM-CAU-rps14 2 TTGCGGGAATGGGATTTGAA TTGGGCTATCCGGGCATATA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.110040 37076 37243 310-319 1.000000 82.7 trnfM-CAU-rps14_p3 trnfM-CAU-rps14 3 AAATGTTGCGGGAATGGGAT TTGGGCTATCCGGGCATATA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.175621 37076 37243 315-324 1.000000 82.1 trnfM-CAU-rps14_p4 trnfM-CAU-rps14 4 AATGTTGCGGGAATGGGATT TTGGGCTATCCGGGCATATA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.175621 37076 37243 314-323 1.000000 82.1 trnfM-CAU-rps14_p5 trnfM-CAU-rps14 5 ATGTTGCGGGAATGGGATTT TTGGGCTATCCGGGCATATA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.175621 37076 37243 313-322 1.000000 82.1 rps14-psaB_p1 rps14-psaB 1 AGTCAAGGAGGGAACTTTGC TCTACCTCGGGCAAATTTGG 20 20 50.0 50.0 57.7 57.9 0.0 19.5 0.401116 37547 37675 267-267 1.000000 78.6 rps14-psaB_p2 rps14-psaB 2 GTCAAGGAGGGAACTTTGCT TCTACCTCGGGCAAATTTGG 20 20 50.0 50.0 57.7 57.9 0.0 19.5 0.401116 37547 37675 266-266 1.000000 78.6 rps14-psaB_p3 rps14-psaB 3 AGTCAAGGAGGGAACTTTGC CTACCTCGGGCAAATTTGGT 20 20 50.0 50.0 57.7 58.2 0.0 19.5 0.444144 37547 37675 266-266 1.000000 78.3 rps14-psaB_p4 rps14-psaB 4 GTCAAGGAGGGAACTTTGCT CTACCTCGGGCAAATTTGGT 20 20 50.0 50.0 57.7 58.2 0.0 19.5 0.444144 37547 37675 265-265 1.000000 78.3 rps14-psaB_p5 rps14-psaB 5 GTCAAGGAGGGAACTTTGCT CTTGATTGCCTCTACCTCGG 20 20 50.0 55.0 57.7 57.8 0.0 0.0 0.509547 37547 37675 276-276 1.000000 77.7 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 47300 48289 867-1040 1.000000 84.6 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 47300 48289 875-1048 1.000000 84.0 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAGAAATAGGGAAAGCCGGC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.2 58.0 21.9 0.0 0.240656 47300 48289 923-1096 1.000000 83.7 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 47300 48289 899-1072 1.000000 83.7 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 AAGAAATAGGGAAAGCCGGC TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.2 58.1 21.9 0.0 0.305465 47300 48289 931-1104 1.000000 83.1 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 CCTTTTCGAATCGGGGCTAA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.0 57.8 1.8 0.0 0.229964 51781 52792 1155-1216 1.000000 79.4 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 CGGGGCTAAAACTCCAGAAA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.391484 51781 52792 1144-1205 1.000000 78.1 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TCGAATCGGGGCTAAAACTC AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.7 57.8 1.8 0.0 0.502034 51781 52792 1150-1211 1.000000 77.2 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CCTTTTCGAATCGGGGCTAA GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 58.0 57.5 1.8 0.0 0.573736 51781 52792 1154-1215 1.000000 76.6 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TCTGGACCTTTTCGAATCGG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.6 57.8 1.8 0.0 0.577367 51781 52792 1161-1222 1.000000 76.6 petG-trnW-CCA_p1 petG-trnW-CCA 1 TTTACAATACAGGCGGGGTG AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 57.9 58.0 0.0 2.6 0.132855 67254 67402 261-261 1.000000 80.2 petG-trnW-CCA_p2 petG-trnW-CCA 2 TTTACAATACAGGCGGGGTG AGAACGTGGGTCTCCAAAAC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.153655 67254 67402 239-239 1.000000 80.1 petG-trnW-CCA_p3 petG-trnW-CCA 3 TTTACAATACAGGCGGGGTG CGCTCTTAGTTCAGTTCGGT 20 20 50.0 50.0 57.9 57.7 0.0 0.0 0.466124 67254 67402 259-259 1.000000 77.5 petG-trnW-CCA_p4 petG-trnW-CCA 4 TACAATACAGGCGGGGTGAT AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 58.5 58.0 0.0 2.6 0.513337 67254 67402 259-259 1.000000 77.1 petG-trnW-CCA_p5 petG-trnW-CCA 5 TACAATACAGGCGGGGTGAT AGAACGTGGGTCTCCAAAAC 20 20 50.0 50.0 58.5 58.0 0.0 0.0 0.534138 67254 67402 237-237 1.000000 77.1 clpP_p1 clpP 1 TGCACCAACGGAAACCATAA TCCAAAAACCCGGATTCGTT 20 20 45.0 45.0 58.0 58.0 0.0 0.7 0.033274 71551 72972 2561-2561 1.000000 81.5 clpP_p2 clpP 2 TTGCACCAACGGAAACCATA TCCAAAAACCCGGATTCGTT 20 20 45.0 45.0 58.0 58.0 0.0 0.7 0.033274 71551 72972 2562-2562 1.000000 81.5 clpP_p3 clpP 3 GATTGGCTGTCTTGCGTTTC TCCAAAAACCCGGATTCGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.7 0.046831 71551 72972 2331-2331 1.000000 81.5 clpP_p4 clpP 4 TGCACCAACGGAAACCATAA AGCAAAGGCCAGAAAAGACA 20 20 45.0 45.0 58.0 57.9 0.0 5.0 0.089117 71551 72972 2609-2609 1.000000 81.0 clpP_p5 clpP 5 TTGCACCAACGGAAACCATA AGCAAAGGCCAGAAAAGACA 20 20 45.0 45.0 58.0 57.9 0.0 5.0 0.089117 71551 72972 2610-2610 1.000000 81.0 psbN-psbH_p1 psbN-psbH 1 GGCGTACCCGGTAAAACTTA TCAACGCTTTGTGTAGCCAT 20 20 50.0 45.0 57.6 58.1 0.0 2.6 0.487569 75383 75480 180-184 1.000000 78.7 psbN-psbH_p2 psbN-psbH 2 TAAGGCGTACCCGGTAAAAC TCAACGCTTTGTGTAGCCAT 20 20 50.0 45.0 57.6 58.1 0.0 2.6 0.487569 75383 75480 183-187 1.000000 78.7 psbN-psbH_p3 psbN-psbH 3 GGCGTACCCGGTAAAACTTA CAGTGGTTTCAAAAAGGCCC 20 20 50.0 50.0 57.6 57.8 0.0 0.0 0.617387 75383 75480 238-242 1.000000 77.1 psbN-psbH_p4 psbN-psbH 4 TAAGGCGTACCCGGTAAAAC CAGTGGTTTCAAAAAGGCCC 20 20 50.0 50.0 57.6 57.8 0.0 0.0 0.617387 75383 75480 241-245 1.000000 77.0 psbN-psbH_p5 psbN-psbH 5 GGCGTACCCGGTAAAACTTA CCTACAGCAGTTCGTCTTGG 20 20 50.0 55.0 57.6 58.3 0.0 0.0 0.663650 75383 75480 219-223 1.000000 76.9 rpl23-trnI-CAU_p1 rpl23-trnI-CAU 1 TGATTTTTCGCCAATAACCGA GAATGGTTAAAGCGCCCAAC 21 20 38.1 50.0 56.5 58.0 0.0 2.3 2.483257 86007 86276 359-394 1.000000 67.1 rpl23-trnI-CAU_p2 rpl23-trnI-CAU 2 TGATTTTTCGCCAATAACCGA CCTGTTAAGCATCCATGGCT 21 20 38.1 50.0 56.5 57.9 0.0 7.0 2.537027 86007 86276 379-414 1.000000 66.5 rpl23-trnI-CAU_p3 rpl23-trnI-CAU 3 TGATTTTTCGCCAATAACCGAA GAATGGTTAAAGCGCCCAAC 22 20 36.4 50.0 57.2 58.0 0.0 2.3 2.777331 86007 86276 359-394 1.000000 64.8 rpl23-trnI-CAU_p4 rpl23-trnI-CAU 4 TTGATTTTTCGCCAATAACCGA GAATGGTTAAAGCGCCCAAC 22 20 36.4 50.0 57.2 58.0 0.0 2.3 2.777331 86007 86276 360-395 1.000000 64.7 rpl23-trnI-CAU_p5 rpl23-trnI-CAU 5 TGATTTTTCGCCAATAACCGAA CCTGTTAAGCATCCATGGCT 22 20 36.4 50.0 57.2 57.9 0.0 7.0 2.831101 86007 86276 379-414 1.000000 64.2 rps15-trnN-GUU_p1 rps15-trnN-GUU 1 CGACCACAACAACCGAATTG ACGGGGGATTCGATCTCATA 20 20 50.0 50.0 58.0 57.7 0.0 0.0 0.335258 127944 128193 494-494 0.500000 57.3 rps15-trnN-GUU_p2 rps15-trnN-GUU 2 TATGAGCTGTCCCGCAAAAA ACGGGGGATTCGATCTCATA 20 20 45.0 50.0 57.8 57.7 0.0 0.0 0.496885 127944 128193 634-634 0.500000 56.0 rps15-trnN-GUU_p3 rps15-trnN-GUU 3 TTATGAGCTGTCCCGCAAAA ACGGGGGATTCGATCTCATA 20 20 45.0 50.0 57.8 57.7 0.0 0.0 0.496885 127944 128193 635-635 0.500000 56.0 rps15-trnN-GUU_p4 rps15-trnN-GUU 4 CGACCACAACAACCGAATTG AACGGGGGATTCGATCTCAT 20 20 50.0 50.0 58.0 58.6 0.0 0.0 0.606399 127944 128193 495-495 0.500000 55.1 rps15-trnN-GUU_p5 rps15-trnN-GUU 5 AACATTATGAGCTGTCCCGC ACGGGGGATTCGATCTCATA 20 20 50.0 50.0 58.3 57.7 0.0 0.0 0.635802 127944 128193 639-639 0.500000 54.9