feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 71 145 -1 75 LSC 0.000000 0 0 28 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 146 333 0 188 LSC 0.093407 17 6 103 300 yes 1.000000 2 1.000000 NA 0.968085 82.100000 psbA gene psbA psbA 334 1395 -1 1062 LSC 0.002825 3 0 47 51 yes 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1396 1696 0 301 LSC 0.019934 6 0 29 51 no 1.000000 2 1.000000 NA 1.000000 51.200000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1697 1731 -1 35 LSC 0.000000 0 0 13 16 no 0.000000 1 0.000000 NA 1.000000 19.700000 matK gene matK matK 2008 3525 -1 1518 LSC 0.011199 17 0 17 23 no 1.000000 2 1.000000 NA 1.000000 51.400000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3526 4253 0 728 LSC 0.005495 4 0 76 38 no 1.000000 2 1.000000 NA 1.000000 49.800000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4254 4290 -1 37 LSC 0.000000 0 0 177 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4291 4987 0 697 LSC 0.017778 12 22 214 74 no 1.000000 2 1.000000 NA 0.968436 62.500000 rps16 gene rps16 rps16 4988 6135 -1 1148 LSC 0.011324 13 0 43 78 no 1.000000 2 1.000000 NA 1.000000 53.500000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6136 7706 0 1571 LSC 0.031068 48 26 53 160 yes 1.000000 2 1.000000 NA 0.983450 67.000000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7707 7778 -1 72 LSC 0.000000 0 0 8 88 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 7779 8142 0 364 LSC 0.010989 4 0 80 213 no 1.000000 2 1.000000 NA 1.000000 51.200000 psbK gene psbK psbK 8143 8328 1 186 LSC 0.000000 0 0 56 27 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_009 igs psbK|psbI psbK-psbI 8329 8748 0 420 LSC 0.016667 7 0 242 126 no 1.000000 2 1.000000 NA 1.000000 59.000000 psbI gene psbI psbI 8749 8859 1 111 LSC 0.000000 0 0 90 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 8860 8947 0 88 LSC 0.012048 1 5 201 135 no 1.000000 2 1.000000 NA 0.943182 59.100000 trnS-GCU tRNA trnS-GCU trnS-GCU 8948 9035 -1 88 LSC 0.000000 0 0 72 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_011 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 9036 10611 0 1576 LSC 0.021711 34 10 160 98 yes 1.000000 2 1.000000 NA 0.993655 64.000000 trnR-UCU tRNA trnR-UCU trnR-UCU 10612 10697 1 86 LSC 0.000000 0 0 300 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_012 igs trnR-UCU|atpA trnR-UCU-atpA 10698 10773 0 76 LSC 0.013158 1 0 300 82 no 1.000000 2 1.000000 NA 1.000000 51.200000 atpA gene atpA atpA 10774 12285 -1 1512 LSC 0.010582 16 0 63 57 no 1.000000 2 1.000000 NA 1.000000 54.100000 IGS_013 igs atpA|atpF atpA-atpF 12286 12353 0 68 LSC 0.014706 1 0 169 147 no 1.000000 2 1.000000 NA 1.000000 57.000000 atpF gene atpF atpF 12354 12908 -1 555 LSC 0.007207 4 0 10 88 yes 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_014 igs atpF|atpH atpF-atpH 12909 13495 0 587 LSC 0.034072 20 0 24 264 no 1.000000 2 1.000000 NA 1.000000 64.900000 atpH gene atpH atpH 13496 13744 -1 249 LSC 0.000000 0 0 132 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_015 igs atpH|atpI atpH-atpI 13745 14006 0 262 LSC 0.007634 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 atpI gene atpI atpI 14007 14750 -1 744 LSC 0.000000 0 0 78 106 no 0.000000 1 0.000000 NA 1.000000 30.900000 IGS_016 igs atpI|rps2 atpI-rps2 14751 14993 0 243 LSC 0.012346 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.600000 rps2 gene rps2 rps2 14994 15704 -1 711 LSC 0.001406 1 0 25 154 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_017 igs rps2|rpoC2 rps2-rpoC2 15705 15957 0 253 LSC 0.011952 3 2 300 1 no 1.000000 2 1.000000 NA 0.992095 45.200000 rpoC2 gene rpoC2 rpoC2 15958 20076 -1 4119 LSC 0.008012 33 0 58 235 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_018 igs rpoC2|rpoC1 rpoC2-rpoC1 20077 20263 0 187 LSC 0.000000 0 0 224 48 no 0.000000 1 0.000000 NA 1.000000 22.400000 rpoC1 gene rpoC1 rpoC1 20264 23087 -1 2824 LSC 0.004295 12 27 300 300 no 1.000000 2 1.000000 NA 0.989377 59.400000 IGS_019 igs rpoC1|rpoB rpoC1-rpoB 23088 23113 0 26 LSC 0.000000 0 0 76 300 no 0.000000 1 0.000000 NA 1.000000 24.400000 rpoB gene rpoB rpoB 23114 26326 -1 3213 LSC 0.004988 16 0 102 59 no 1.000000 2 1.000000 NA 0.998444 47.500000 IGS_020 igs rpoB|trnC-GCA rpoB-trnC-GCA 26327 27612 0 1286 LSC 0.008689 11 20 13 88 no 1.000000 2 1.000000 NA 0.984448 51.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 27613 27693 1 81 LSC 0.000000 0 0 209 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_021 igs trnC-GCA|petN trnC-GCA-petN 27694 27894 0 201 LSC 0.019900 4 0 290 41 no 1.000000 2 1.000000 NA 1.000000 52.000000 petN gene petN petN 27895 27984 1 90 LSC 0.011111 1 0 93 152 no 1.000000 2 1.000000 NA 1.000000 50.900000 IGS_022 igs petN|psbM petN-psbM 27985 28689 0 705 LSC 0.025564 17 40 48 96 yes 1.000000 2 1.000000 NA 0.943262 66.500000 psbM gene psbM psbM 28690 28794 -1 105 LSC 0.009524 1 0 154 62 no 1.000000 2 1.000000 NA 1.000000 47.600000 IGS_023 igs psbM|trnD-GUC psbM-trnD-GUC 28795 29755 0 961 LSC 0.016807 16 9 8 151 no 1.000000 2 1.000000 NA 0.990635 54.900000 trnD-GUC tRNA trnD-GUC trnD-GUC 29756 29829 -1 74 LSC 0.000000 0 0 84 77 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_024 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 29830 30281 0 452 LSC 0.011062 5 0 158 103 no 1.000000 2 1.000000 NA 1.000000 54.800000 trnY-GUA tRNA trnY-GUA trnY-GUA 30282 30365 -1 84 LSC 0.000000 0 0 76 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_025 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 30366 30424 0 59 LSC 0.033898 2 0 160 178 yes 1.000000 2 1.000000 NA 1.000000 69.000000 trnE-UUC tRNA trnE-UUC trnE-UUC 30425 30497 -1 73 LSC 0.000000 0 0 13 105 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_026 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 30498 31276 0 779 LSC 0.011478 8 82 86 131 no 1.000000 2 1.000000 NA 0.894737 59.900000 trnT-GGU tRNA trnT-GGU trnT-GGU 31277 31348 1 72 LSC 0.000000 0 0 26 59 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_027 igs trnT-GGU|psbD trnT-GGU-psbD 31349 32894 0 1546 LSC 0.019066 29 25 98 86 no 1.000000 2 1.000000 NA 0.983829 62.600000 psbD gene psbD psbD 32895 33956 1 1062 LSC 0.004708 5 0 74 300 no 1.000000 2 1.000000 NA 1.000000 52.000000 psbC gene psbC psbC 33904 35325 1 1422 LSC 0.002813 4 0 300 3 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_029 igs psbC|trnS-UGA psbC-trnS-UGA 35326 35564 0 239 LSC 0.020921 5 0 75 104 no 1.000000 2 1.000000 NA 1.000000 55.200000 trnS-UGA tRNA trnS-UGA trnS-UGA 35565 35652 -1 88 LSC 0.000000 0 0 14 16 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_030 igs trnS-UGA|psbZ trnS-UGA-psbZ 35653 35985 0 333 LSC 0.006042 2 2 102 288 no 1.000000 2 1.000000 NA 0.993994 49.900000 psbZ gene psbZ psbZ 35986 36174 1 189 LSC 0.000000 0 0 81 99 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_031 igs psbZ|trnG-UCC psbZ-trnG-UCC 36175 36783 0 609 LSC 0.039861 23 32 270 151 yes 1.000000 2 1.000000 NA 0.947455 82.500000 trnG-UCC tRNA trnG-UCC trnG-UCC 36784 36854 1 71 LSC 0.000000 0 0 7 80 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_032 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 36855 37001 0 147 LSC 0.007143 1 7 78 102 no 1.000000 2 1.000000 NA 0.952381 52.000000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 37002 37075 -1 74 LSC 0.000000 0 0 66 28 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_033 igs trnfM-CAU|rps14 trnfM-CAU-rps14 37076 37243 0 168 LSC 0.031447 5 9 140 300 yes 1.000000 2 1.000000 NA 0.946429 70.600000 rps14 gene rps14 rps14 37244 37546 -1 303 LSC 0.000000 0 0 30 79 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_034 igs rps14|psaB rps14-psaB 37547 37675 0 129 LSC 0.046512 6 0 300 39 yes 1.000000 2 1.000000 NA 1.000000 67.200000 psaB gene psaB psaB 37676 39880 -1 2205 LSC 0.001361 3 0 44 300 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_035 igs psaB|psaA psaB-psaA 39881 39905 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 39906 42158 -1 2253 LSC 0.000444 1 0 300 155 no 1.000000 2 1.000000 NA 1.000000 54.100000 IGS_036 igs psaA|ycf3 psaA-ycf3 42159 42991 0 833 LSC 0.010796 8 92 300 13 no 1.000000 2 1.000000 NA 0.889556 53.900000 ycf3 gene ycf3 ycf3 42992 44975 -1 1984 LSC 0.009630 19 11 23 120 no 1.000000 2 1.000000 NA 0.994456 50.500000 IGS_037 igs ycf3|trnS-GGA ycf3-trnS-GGA 44976 45752 0 777 LSC 0.014550 11 21 163 125 no 1.000000 2 1.000000 NA 0.972973 64.100000 trnS-GGA tRNA trnS-GGA trnS-GGA 45753 45839 1 87 LSC 0.000000 0 0 22 38 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_038 igs trnS-GGA|rps4 trnS-GGA-rps4 45840 46113 0 274 LSC 0.011538 3 14 109 112 no 1.000000 2 1.000000 NA 0.948905 57.000000 rps4 gene rps4 rps4 46114 46716 -1 603 LSC 0.014925 9 0 20 118 no 1.000000 2 1.000000 NA 1.000000 53.800000 IGS_039 igs rps4|trnT-UGU rps4-trnT-UGU 46717 47226 0 510 LSC 0.008421 4 35 65 84 no 1.000000 2 1.000000 NA 0.931373 55.800000 trnT-UGU tRNA trnT-UGU trnT-UGU 47227 47299 -1 73 LSC 0.000000 0 0 34 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_040 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 47300 48289 0 990 LSC 0.024480 20 173 107 216 yes 1.000000 2 1.000000 NA 0.825253 66.700000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 48290 48326 1 37 LSC 0.000000 0 0 39 179 no 0.000000 1 0.000000 NA 1.000000 21.700000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 48836 48885 1 50 LSC 0.000000 0 0 37 100 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_043 igs trnL-UAA|ndhJ trnL-UAA-ndhJ 48886 50087 0 1202 LSC 0.010934 13 13 87 248 no 1.000000 2 1.000000 NA 0.989185 57.600000 ndhJ gene ndhJ ndhJ 50088 50564 -1 477 LSC 0.004193 2 0 24 210 no 1.000000 2 1.000000 NA 1.000000 45.400000 IGS_044 igs ndhJ|ndhK ndhJ-ndhK 50565 50679 0 115 LSC 0.000000 0 0 92 95 no 0.000000 1 0.000000 NA 1.000000 25.700000 ndhK gene ndhK ndhK 50680 51360 -1 681 LSC 0.004405 3 0 207 78 no 1.000000 2 1.000000 NA 1.000000 52.100000 IGS_045 igs ndhK|ndhC ndhK-ndhC 51361 51417 0 57 LSC 0.000000 0 1 300 21 no 1.000000 2 1.000000 NA 0.982456 40.800000 ndhC gene ndhC ndhC 51418 51780 -1 363 LSC 0.002755 1 0 300 17 no 1.000000 2 1.000000 NA 1.000000 41.700000 IGS_046 igs ndhC|trnV-UAC ndhC-trnV-UAC 51781 52792 0 1012 LSC 0.016815 17 1 300 253 yes 1.000000 2 1.000000 NA 0.999012 68.500000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 52793 52829 -1 37 LSC 0.000000 0 0 60 216 no 0.000000 1 0.000000 NA 1.000000 23.200000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 53420 53457 -1 38 LSC 0.000000 0 0 51 85 no 0.000000 1 0.000000 NA 1.000000 22.600000 IGS_049 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 53458 53636 0 179 LSC 0.005587 1 0 89 300 no 1.000000 2 1.000000 NA 1.000000 47.400000 trnM-CAU tRNA trnM-CAU trnM-CAU 53637 53708 1 72 LSC 0.000000 0 0 93 300 no 0.000000 1 0.000000 NA 1.000000 25.700000 IGS_050 igs trnM-CAU|atpE trnM-CAU-atpE 53709 53915 0 207 LSC 0.000000 0 22 165 300 no 1.000000 2 1.000000 NA 0.893720 53.100000 atpE gene atpE atpE 53916 54317 -1 402 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 35.900000 IGS_051 igs atpE|atpB atpE-atpB 54318 54339 0 22 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 atpB gene atpB atpB 54340 55698 -1 1359 LSC 0.003679 5 0 300 153 no 1.000000 2 1.000000 NA 1.000000 57.300000 IGS_052 igs atpB|rbcL atpB-rbcL 55699 56554 0 856 LSC 0.012865 11 1 15 54 no 1.000000 2 1.000000 NA 0.998832 52.400000 rbcL gene rbcL rbcL 56555 57982 1 1428 LSC 0.004202 6 0 67 11 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_053 igs rbcL|accD rbcL-accD 57983 58391 0 409 LSC 0.004950 2 5 300 31 no 1.000000 2 1.000000 NA 0.987775 46.100000 accD gene accD accD 58392 59888 1 1497 LSC 0.009352 14 0 0 6 no 1.000000 2 1.000000 NA 1.000000 49.100000 IGS_054 igs accD|psaI accD-psaI 59889 60426 0 538 LSC 0.011429 6 13 98 112 no 1.000000 2 1.000000 NA 0.975836 58.700000 psaI gene psaI psaI 60427 60528 1 102 LSC 0.000000 0 0 56 10 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_055 igs psaI|ycf4 psaI-ycf4 60529 60819 0 291 LSC 0.014599 4 17 158 300 no 1.000000 2 1.000000 NA 0.941581 62.200000 ycf4 gene ycf4 ycf4 60820 61374 1 555 LSC 0.001802 1 0 12 28 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_056 igs ycf4|cemA ycf4-cemA 61375 62320 0 946 LSC 0.006403 6 9 108 50 no 1.000000 2 1.000000 NA 0.990486 52.100000 cemA gene cemA cemA 62321 63016 1 696 LSC 0.005747 4 0 202 38 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_057 igs cemA|petA cemA-petA 63017 63145 0 129 LSC 0.007752 1 0 300 248 no 1.000000 2 1.000000 NA 1.000000 57.000000 petA gene petA petA 63146 64108 1 963 LSC 0.005192 5 0 90 131 no 1.000000 2 1.000000 NA 1.000000 53.500000 IGS_058 igs petA|psbJ petA-psbJ 64109 64977 0 869 LSC 0.016222 14 6 60 50 no 1.000000 2 1.000000 NA 0.993096 57.500000 psbJ gene psbJ psbJ 64978 65100 -1 123 LSC 0.016260 2 0 78 126 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_059 igs psbJ|psbL psbJ-psbL 65101 65240 0 140 LSC 0.014286 2 0 60 300 no 1.000000 2 1.000000 NA 1.000000 50.200000 psbL gene psbL psbL 65241 65357 -1 117 LSC 0.000000 0 0 11 200 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_060 igs psbL|psbF psbL-psbF 65358 65383 0 26 LSC 0.000000 0 0 128 174 no 0.000000 1 0.000000 NA 1.000000 28.300000 psbF gene psbF psbF 65384 65503 -1 120 LSC 0.000000 0 0 154 54 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_061 igs psbF|psbE psbF-psbE 65504 65512 0 9 LSC 0.000000 0 0 274 45 no 0.000000 1 0.000000 NA 1.000000 22.100000 psbE gene psbE psbE 65513 65764 -1 252 LSC 0.007937 2 0 283 74 no 1.000000 2 1.000000 NA 1.000000 47.600000 IGS_062 igs psbE|petL psbE-petL 65765 66868 0 1104 LSC 0.017352 19 9 182 65 no 1.000000 2 1.000000 NA 0.991848 59.400000 petL gene petL petL 66869 66964 1 96 LSC 0.010417 1 0 300 4 no 1.000000 2 1.000000 NA 1.000000 43.800000 IGS_063 igs petL|petG petL-petG 66965 67139 0 175 LSC 0.005714 1 0 30 126 no 1.000000 2 1.000000 NA 1.000000 43.000000 petG gene petG petG 67140 67253 1 114 LSC 0.000000 0 0 170 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_064 igs petG|trnW-CCA petG-trnW-CCA 67254 67402 0 149 LSC 0.026846 4 0 284 215 yes 1.000000 2 1.000000 NA 1.000000 67.900000 trnW-CCA tRNA trnW-CCA trnW-CCA 67403 67475 -1 73 LSC 0.000000 0 0 30 142 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_065 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 67476 67655 0 180 LSC 0.005747 1 6 103 22 no 1.000000 2 1.000000 NA 0.966667 45.700000 trnP-UGG tRNA trnP-UGG trnP-UGG 67656 67729 -1 74 LSC 0.013514 1 0 37 88 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_066 igs trnP-UGG|psaJ trnP-UGG-psaJ 67730 68185 0 456 LSC 0.013514 6 12 51 130 no 1.000000 2 1.000000 NA 0.973684 54.900000 psaJ gene psaJ psaJ 68186 68320 1 135 LSC 0.014815 2 0 60 48 no 1.000000 2 1.000000 NA 1.000000 49.600000 IGS_067 igs psaJ|rpl33 psaJ-rpl33 68321 68804 0 484 LSC 0.008264 4 0 0 240 no 1.000000 2 1.000000 NA 1.000000 46.100000 rpl33 gene rpl33 rpl33 68805 69005 1 201 LSC 0.000000 0 0 3 39 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_068 igs rpl33|rps18 rpl33-rps18 69006 69540 0 535 LSC 0.026465 14 6 204 25 no 1.000000 2 1.000000 NA 0.988785 60.500000 rps18 gene rps18 rps18 69541 69882 1 342 LSC 0.011696 4 0 10 63 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_069 igs rps18|rpl20 rps18-rpl20 69883 70116 0 234 LSC 0.018779 4 21 45 57 no 1.000000 2 1.000000 NA 0.910256 55.200000 rpl20 gene rpl20 rpl20 70117 70494 -1 378 LSC 0.005291 2 0 45 17 no 1.000000 2 1.000000 NA 1.000000 43.400000 IGS_070 igs rpl20|rps12 rpl20-rps12 70495 71259 0 765 LSC 0.001316 1 5 293 300 no 1.000000 2 1.000000 NA 0.993464 60.100000 rps12_part1 gene rps12 rps12 71260 71373 -1 114 LSC 0.000000 0 0 300 188 no 0.000000 1 0.000000 NA 1.000000 32.900000 IGS_071 igs rps12|clpP rps12-clpP 71374 71550 0 177 LSC 0.000000 0 0 300 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 clpP gene clpP clpP 71551 72972 -1 1422 LSC 0.025460 36 8 300 12 yes 1.000000 2 1.000000 NA 0.994374 59.800000 IGS_072 igs clpP|psbB clpP-psbB 72973 73385 0 413 LSC 0.014670 6 4 39 245 no 1.000000 2 1.000000 NA 0.990315 52.100000 psbB gene psbB psbB 73386 74912 1 1527 LSC 0.002620 4 0 57 300 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_073 igs psbB|psbT psbB-psbT 74913 75082 0 170 LSC 0.000000 0 0 150 138 no 0.000000 1 0.000000 NA 1.000000 29.100000 psbT gene psbT psbT 75083 75190 1 108 LSC 0.000000 0 0 300 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_074 igs psbT|psbN psbT-psbN 75191 75250 0 60 LSC 0.016667 1 0 300 151 no 1.000000 2 1.000000 NA 1.000000 58.400000 psbN gene psbN psbN 75251 75382 -1 132 LSC 0.000000 0 0 29 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_075 igs psbN|psbH psbN-psbH 75383 75480 0 98 LSC 0.021277 2 4 161 259 yes 1.000000 2 1.000000 NA 0.959184 65.700000 psbH gene psbH psbH 75481 75702 1 222 LSC 0.000000 0 0 59 37 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_076 igs psbH|petB psbH-petB 75703 75812 0 110 LSC 0.009091 1 0 281 65 no 1.000000 2 1.000000 NA 1.000000 47.600000 petB gene petB petB 75813 77244 1 1432 LSC 0.006294 9 2 72 73 no 1.000000 2 1.000000 NA 0.998603 52.900000 IGS_077 igs petB|petD petB-petD 77245 77474 0 230 LSC 0.004566 1 11 274 141 no 1.000000 2 1.000000 NA 0.952174 55.300000 petD gene petD petD 77475 78641 1 1167 LSC 0.010283 12 0 156 74 no 1.000000 2 1.000000 NA 1.000000 55.200000 IGS_078 igs petD|rpoA petD-rpoA 78642 78803 0 162 LSC 0.019608 3 9 45 95 no 1.000000 2 1.000000 NA 0.944444 56.700000 rpoA gene rpoA rpoA 78804 79790 -1 987 LSC 0.011213 11 6 34 300 no 1.000000 2 1.000000 NA 0.993921 53.300000 IGS_079 igs rpoA|rps11 rpoA-rps11 79791 79876 0 86 LSC 0.000000 0 5 299 241 no 1.000000 2 1.000000 NA 0.941860 57.100000 rps11 gene rps11 rps11 79877 80293 -1 417 LSC 0.007194 3 0 300 91 no 1.000000 2 1.000000 NA 1.000000 50.900000 IGS_080 igs rps11|rpl36 rps11-rpl36 80294 80421 0 128 LSC 0.007812 1 0 16 31 no 1.000000 2 1.000000 NA 1.000000 43.200000 rpl36 gene rpl36 rpl36 80422 80535 -1 114 LSC 0.017544 2 0 36 266 no 1.000000 2 1.000000 NA 1.000000 50.300000 IGS_081 igs rpl36|rps8 rpl36-rps8 80536 81084 0 549 LSC 0.003914 2 38 71 75 no 1.000000 2 1.000000 NA 0.930783 54.500000 rps8 gene rps8 rps8 81085 81483 -1 399 LSC 0.015038 6 0 180 134 no 1.000000 2 1.000000 NA 1.000000 58.300000 IGS_082 igs rps8|rpl14 rps8-rpl14 81484 81635 0 152 LSC 0.006579 1 0 54 39 no 1.000000 2 1.000000 NA 1.000000 44.200000 rpl14 gene rpl14 rpl14 81636 82004 -1 369 LSC 0.010840 4 0 17 64 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_083 igs rpl14|rpl16 rpl14-rpl16 82005 82111 0 107 LSC 0.018868 2 1 139 300 no 1.000000 2 1.000000 NA 0.990654 59.700000 rpl16 gene rpl16 rpl16 82112 82549 -1 438 LSC 0.002283 1 0 0 67 no 1.000000 2 1.000000 NA 1.000000 41.700000 IGS_084 igs rpl16|rps3 rpl16-rps3 82550 82705 0 156 LSC 0.019231 3 0 38 197 no 1.000000 2 1.000000 NA 1.000000 51.400000 rps3 gene rps3 rps3 82706 83362 -1 657 LSC 0.009132 6 0 13 44 no 1.000000 2 1.000000 NA 1.000000 50.000000 IGS_085 igs rps3|rps19 rps3-rps19 83363 83861 0 499 LSC 0.006012 3 0 154 171 no 1.000000 2 1.000000 NA 1.000000 56.700000 rps19 gene rps19 rps19 83862 84011 -1 150 LSC 0.000000 0 0 244 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_086 igs rps19|rpl2 rps19-rpl2 84012 84201 0 190 LSC 0.005263 1 0 300 186 no 1.000000 2 1.000000 NA 1.000000 54.500000 rpl2 gene rpl2 rpl2 84202 85706 -1 1505 IRb 0.001329 2 0 168 225 no 1.000000 2 1.000000 NA 1.000000 57.100000 IGS_087 igs rpl2|rpl23 rpl2-rpl23 85707 85724 0 18 IRb 0.000000 0 0 300 207 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 85725 86006 -1 282 IRb 0.003546 1 0 300 99 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_088 igs rpl23|trnI-CAU rpl23-trnI-CAU 86007 86276 0 270 IRb 0.059574 14 35 74 143 yes 1.000000 2 1.000000 NA 0.870370 74.600000 trnI-CAU tRNA trnI-CAU trnI-CAU 86277 86350 -1 74 IRb 0.000000 0 0 96 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 IGS_089 igs trnI-CAU|ycf2 trnI-CAU-ycf2 86351 86412 0 62 IRb 0.000000 0 0 170 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 ycf2 gene ycf2 ycf2 86413 93327 1 6915 IRb 0.002320 16 18 232 300 no 1.000000 2 1.000000 NA 0.997397 54.100000 IGS_090 igs ycf2|trnL-CAA ycf2-trnL-CAA 93328 93722 0 395 IRb 0.002584 1 8 146 300 no 1.000000 2 1.000000 NA 0.979747 53.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 93723 93803 -1 81 IRb 0.000000 0 0 65 300 no 0.000000 1 0.000000 NA 1.000000 23.600000 IGS_091 igs trnL-CAA|ndhB trnL-CAA-ndhB 93804 94245 0 442 IRb 0.000000 0 0 146 300 no 0.000000 1 0.000000 NA 1.000000 32.700000 ndhB gene ndhB ndhB 94246 96464 -1 2219 IRb 0.000451 1 0 300 42 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_092 igs ndhB|rps7 ndhB-rps7 96465 96787 0 323 IRb 0.006192 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 rps7 gene rps7 rps7 96788 97255 -1 468 IRb 0.000000 0 0 95 300 no 0.000000 1 0.000000 NA 1.000000 29.400000 IGS_093 igs rps7|rps12 rps7-rps12 97256 97314 0 59 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 97315 97578 -1 264 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_094 igs rps12|trnV-GAC rps12-trnV-GAC 97579 99057 0 1479 IRb 0.000000 0 40 300 97 no 1.000000 2 1.000000 NA 0.972955 53.600000 trnV-GAC tRNA trnV-GAC trnV-GAC 99058 99129 1 72 IRb 0.000000 0 0 300 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_095 igs trnV-GAC|trnI-GAU trnV-GAC-trnI-GAU 99130 101134 0 2005 IRb 0.001001 2 6 300 300 no 1.000000 2 1.000000 NA 0.997007 58.600000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 101135 101176 1 42 IRb 0.000000 0 0 116 300 no 0.000000 1 0.000000 NA 1.000000 27.400000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 102124 102158 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_098 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 102159 102217 0 59 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 102218 102255 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 103050 103084 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_101 igs trnA-UGC|trnR-ACG trnA-UGC-trnR-ACG 103085 106849 0 3765 IRb 0.000531 2 0 300 233 no 1.000000 2 1.000000 NA 1.000000 54.700000 trnR-ACG tRNA trnR-ACG trnR-ACG 106850 106923 1 74 IRb 0.000000 0 0 300 159 no 0.000000 1 0.000000 NA 1.000000 30.700000 IGS_102 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 106924 107520 0 597 IRb 0.005025 3 0 300 207 no 1.000000 2 1.000000 NA 1.000000 61.600000 trnN-GUU tRNA trnN-GUU trnN-GUU 107521 107592 -1 72 IRb 0.000000 0 0 35 135 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_103 igs trnN-GUU|ndhF trnN-GUU-ndhF 107593 107919 0 327 IRb 0.015291 5 0 107 18 no 1.000000 2 1.000000 NA 1.000000 48.200000 ndhF gene ndhF ndhF 107920 110151 -1 2232 SSC 0.006720 15 0 20 276 no 1.000000 2 1.000000 NA 1.000000 47.600000 IGS_104 igs ndhF|rpl32 ndhF-rpl32 110152 111052 0 901 SSC 0.018868 17 0 80 27 no 1.000000 2 1.000000 NA 1.000000 56.600000 rpl32 gene rpl32 rpl32 111053 111226 1 174 SSC 0.011494 2 0 46 47 no 1.000000 2 1.000000 NA 1.000000 47.600000 IGS_105 igs rpl32|trnL-UAG rpl32-trnL-UAG 111227 112547 0 1321 SSC 0.016166 21 22 95 192 no 1.000000 2 1.000000 NA 0.983346 61.800000 trnL-UAG tRNA trnL-UAG trnL-UAG 112548 112627 1 80 SSC 0.000000 0 0 27 112 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_106 igs trnL-UAG|ccsA trnL-UAG-ccsA 112628 112757 0 130 SSC 0.011628 1 44 107 13 no 1.000000 2 1.000000 NA 0.661538 41.400000 ccsA gene ccsA ccsA 112758 113723 1 966 SSC 0.008282 8 0 17 101 no 1.000000 2 1.000000 NA 1.000000 49.800000 IGS_107 igs ccsA|ndhD ccsA-ndhD 113724 113975 0 252 SSC 0.015873 4 0 60 21 no 1.000000 2 1.000000 NA 1.000000 48.200000 ndhD gene ndhD ndhD 113976 115478 -1 1503 SSC 0.005323 8 0 23 228 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_108 igs ndhD|psaC ndhD-psaC 115479 115619 0 141 SSC 0.000000 0 0 300 87 no 0.000000 1 0.000000 NA 1.000000 25.300000 psaC gene psaC psaC 115620 115865 -1 246 SSC 0.008130 2 0 300 129 no 1.000000 2 1.000000 NA 1.000000 51.800000 IGS_109 igs psaC|ndhE psaC-ndhE 115866 116092 0 227 SSC 0.008811 2 0 62 300 no 1.000000 2 1.000000 NA 1.000000 47.200000 ndhE gene ndhE ndhE 116093 116398 -1 306 SSC 0.000000 0 0 2 20 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_110 igs ndhE|ndhG ndhE-ndhG 116399 116683 0 285 SSC 0.014035 4 0 300 225 no 1.000000 2 1.000000 NA 1.000000 60.600000 ndhG gene ndhG ndhG 116684 117214 -1 531 SSC 0.007533 4 0 38 47 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_111 igs ndhG|ndhI ndhG-ndhI 117215 117496 0 282 SSC 0.024823 7 0 71 75 no 1.000000 2 1.000000 NA 1.000000 57.100000 ndhI gene ndhI ndhI 117497 118000 -1 504 SSC 0.001984 1 0 2 3 no 1.000000 2 1.000000 NA 1.000000 43.000000 IGS_112 igs ndhI|ndhA ndhI-ndhA 118001 118076 0 76 SSC 0.026316 2 0 300 51 no 1.000000 2 1.000000 NA 1.000000 56.500000 ndhA gene ndhA ndhA 118077 120231 -1 2155 SSC 0.004649 10 4 37 109 no 1.000000 2 1.000000 NA 0.998144 48.000000 IGS_113 igs ndhA|ndhH ndhA-ndhH 120232 120232 0 1 SSC 0.000000 0 0 300 108 no 0.000000 1 0.000000 NA 1.000000 26.900000 ndhH gene ndhH ndhH 120233 121414 -1 1182 SSC 0.005076 6 0 300 55 no 1.000000 2 1.000000 NA 1.000000 50.800000 IGS_114 igs ndhH|rps15 ndhH-rps15 121415 121517 0 103 SSC 0.019417 2 0 300 26 no 1.000000 2 1.000000 NA 1.000000 50.600000 rps15 gene rps15 rps15 121518 121790 -1 273 SSC 0.014652 4 0 8 68 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_115 igs rps15|trnN-GUU rps15-trnN-GUU 121791 128236 0 6446 SSC 0.019202 116 405 17 300 yes 1.000000 2 1.000000 NA 0.937170 54.100000 trnN-GUU tRNA trnN-GUU trnN-GUU 128237 128308 1 72 IRa NA 0 72 292 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_116 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 128309 128905 0 597 IRa NA 0 597 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnR-ACG tRNA trnR-ACG trnR-ACG 128906 128979 -1 74 IRa NA 0 74 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_117 igs trnR-ACG|trnA-UGC trnR-ACG-trnA-UGC 128980 132744 0 3765 IRa NA 0 3765 300 300 no 1.000000 2 1.000000 NA 0.000000 41.900000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 132745 132779 -1 35 IRa NA 0 35 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 133574 133611 -1 38 IRa NA 0 38 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_120 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 133612 133670 0 59 IRa NA 0 59 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 133671 133705 -1 35 IRa NA 0 35 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 134653 134694 -1 42 IRa NA 0 42 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_123 igs trnI-GAU|trnV-GAC trnI-GAU-trnV-GAC 134695 136699 0 2005 IRa NA 0 2005 300 300 no 1.000000 2 1.000000 NA 0.000000 45.200000 trnV-GAC tRNA trnV-GAC trnV-GAC 136700 136771 -1 72 IRa NA 0 72 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_124 igs trnV-GAC|rps12 trnV-GAC-rps12 136772 138250 0 1479 IRa NA 0 1479 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 rps12_part2 gene rps12 rps12 138251 138514 1 264 IRa NA 0 264 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_125 igs rps12|rps7 rps12-rps7 138515 138573 0 59 IRa NA 0 59 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rps7 gene rps7 rps7 138574 139041 1 468 IRa NA 0 468 300 300 no 1.000000 2 1.000000 NA 0.000000 43.500000 IGS_126 igs rps7|ndhB rps7-ndhB 139042 139364 0 323 IRa NA 0 323 300 300 no 1.000000 2 1.000000 NA 0.000000 40.500000 ndhB gene ndhB ndhB 139365 141583 1 2219 IRa NA 0 2219 300 300 no 1.000000 2 1.000000 NA 0.000000 44.800000 IGS_127 igs ndhB|trnL-CAA ndhB-trnL-CAA 141584 142025 0 442 IRa NA 0 442 300 300 no 1.000000 2 1.000000 NA 0.000000 43.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 142026 142106 1 81 IRa NA 0 81 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_128 igs trnL-CAA|ycf2 trnL-CAA-ycf2 142107 142501 0 395 IRa NA 0 395 300 300 no 1.000000 2 1.000000 NA 0.000000 42.000000 ycf2 gene ycf2 ycf2 142502 149416 -1 6915 IRa NA 0 6915 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_129 igs ycf2|trnI-CAU ycf2-trnI-CAU 149417 149478 0 62 IRa NA 0 62 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 149479 149552 1 74 IRa NA 0 74 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_130 igs trnI-CAU|rpl23 trnI-CAU-rpl23 149553 149822 0 270 IRa NA 0 270 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpl23 gene rpl23 rpl23 149823 150104 1 282 IRa NA 0 282 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_131 igs rpl23|rpl2 rpl23-rpl2 150105 150122 0 18 IRa NA 0 18 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpl2 gene rpl2 rpl2 150123 151627 1 1505 IRa NA 0 1505 300 58 no 1.000000 2 1.000000 NA 0.000000 35.600000 IGS_132 igs rpl2|trnH-GUG rpl2-trnH-GUG 151628 70 0 128 LSC 0.100000 7 58 300 86 no 1.000000 2 1.000000 NA 0.546875 67.600000