primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-CAC-psbA_p1 trnH-CAC-psbA 1 CTGCCTTAATCCACTTGGCT GCTGTTGAGGCTCCATCTAC 20 20 50.0 55.0 57.9 58.1 0.0 12.9 0.188044 76 452 402-435 1.000000 90.5 trnH-CAC-psbA_p2 trnH-CAC-psbA 2 CTGCCTTAATCCACTTGGCT CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 76 452 417-450 1.000000 90.4 trnH-CAC-psbA_p3 trnH-CAC-psbA 3 CTGCCTTAATCCACTTGGCT TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 76 452 420-453 1.000000 90.3 trnH-CAC-psbA_p4 trnH-CAC-psbA 4 ACTGCCTTAATCCACTTGGC GCTGTTGAGGCTCCATCTAC 20 20 50.0 55.0 58.2 58.1 0.0 12.9 0.213831 76 452 403-436 1.000000 90.3 trnH-CAC-psbA_p5 trnH-CAC-psbA 5 ACTGCCTTAATCCACTTGGC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 58.2 57.9 0.0 13.4 0.226475 76 452 418-451 1.000000 90.2 trnK-AAA-rps16_p1 trnK-AAA-rps16 1 CCTTTCAGGATCAGTCGTGG GCCTTGTTGCTGTCGTTTTT 20 20 55.0 45.0 58.0 58.1 0.0 0.0 0.094492 4403 5123 1358-1424 1.000000 90.0 trnK-AAA-rps16_p2 trnK-AAA-rps16 2 TCGACACCGAAAACAAGGTT GCCTTGTTGCTGTCGTTTTT 20 20 45.0 45.0 58.0 58.1 0.0 0.0 0.105760 4403 5123 1450-1516 1.000000 89.8 trnK-AAA-rps16_p3 trnK-AAA-rps16 3 TGGTCTTACAAACGCTACCG GCCTTGTTGCTGTCGTTTTT 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.147593 4403 5123 1341-1407 1.000000 89.6 trnK-AAA-rps16_p4 trnK-AAA-rps16 4 TCAGGATCAGTCGTGGTCTT GCCTTGTTGCTGTCGTTTTT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.154025 4403 5123 1354-1420 1.000000 89.4 trnK-AAA-rps16_p5 trnK-AAA-rps16 5 TTCAGGATCAGTCGTGGTCT GCCTTGTTGCTGTCGTTTTT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.154025 4403 5123 1355-1421 1.000000 89.4 rps16-trnQ-CAA_p1 rps16-trnQ-CAA 1 GCAAGCTCTATACGCGTCTT CAAAACCCTAGCACCACTGT 20 20 50.0 50.0 58.2 58.0 18.6 0.0 0.177294 5309 5988 1116-1116 0.250000 48.6 rps16-trnQ-CAA_p2 rps16-trnQ-CAA 2 GCAAGCTCTATACGCGTCTT TGGCGACTAAAAAGGTGCTT 20 20 50.0 45.0 58.2 58.0 18.6 0.0 0.182891 5309 5988 1469-1469 0.250000 48.5 rps16-trnQ-CAA_p3 rps16-trnQ-CAA 3 GCAAGCTCTATACGCGTCTT TGTCAAAACCCTAGCACCAC 20 20 50.0 50.0 58.2 58.0 18.6 0.0 0.182891 5309 5988 1119-1119 0.250000 48.5 rps16-trnQ-CAA_p4 rps16-trnQ-CAA 4 GCAAGCTCTATACGCGTCTT TTGGCGACTAAAAAGGTGCT 20 20 50.0 45.0 58.2 58.0 18.6 0.0 0.182891 5309 5988 1470-1470 0.250000 48.5 rps16-trnQ-CAA_p5 rps16-trnQ-CAA 5 GCGCCCTTTTCAGTAAATCG CAAAACCCTAGCACCACTGT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.192804 5309 5988 986-986 0.250000 48.5 trnS-AGC-trnG-GGA_p1 trnS-AGC-trnG-GGA 1 CCAACGCTTTAGTCCACTCA GGAACGAATCACACTTTTACCA 20 22 50.0 40.9 57.8 56.9 0.0 0.0 3.248264 7373 8110 661-807 1.000000 64.5 trnS-AGC-trnG-GGA_p2 trnS-AGC-trnG-GGA 2 AACGCTTTAGTCCACTCAGC GGAACGAATCACACTTTTACCA 20 22 50.0 40.9 58.2 56.9 2.0 0.0 3.287421 7373 8110 659-805 1.000000 64.2 trnS-AGC-trnG-GGA_p3 trnS-AGC-trnG-GGA 3 CCAACGCTTTAGTCCACTCA GGAACGAATCACACTTTTACCAC 20 23 50.0 43.5 57.8 58.2 0.0 0.0 3.383831 7373 8110 661-807 1.000000 63.4 trnS-AGC-trnG-GGA_p4 trnS-AGC-trnG-GGA 4 AACGCTTTAGTCCACTCAGC GGAACGAATCACACTTTTACCAC 20 23 50.0 43.5 58.2 58.2 2.0 0.0 3.422988 7373 8110 659-805 1.000000 63.1 trnS-AGC-trnG-GGA_p5 trnS-AGC-trnG-GGA 5 CCAACGCTTTAGTCCACTCA AGGAACGAATCACACTTTTACCA 20 23 50.0 39.1 57.8 58.3 0.0 0.0 3.453494 7373 8110 662-808 1.000000 62.9 trnG-GGA-trnR-AGA_p1 trnG-GGA-trnR-AGA 1 AGCCTTCCAAGCTAACGATG TGGTATTGCGTCCAATAGGA 20 20 50.0 45.0 58.0 56.3 0.0 0.0 1.708175 8893 9068 274-303 1.000000 74.0 trnG-GGA-trnR-AGA_p2 trnG-GGA-trnR-AGA 2 ACCCTTAGCCTTCCAAGCTA TGGTATTGCGTCCAATAGGA 20 20 50.0 45.0 58.0 56.3 0.0 0.0 1.711492 8893 9068 280-309 1.000000 73.9 trnG-GGA-trnR-AGA_p3 trnG-GGA-trnR-AGA 3 CGACGTCGACTAAAACCCTT TGGTATTGCGTCCAATAGGA 20 20 50.0 45.0 57.9 56.3 33.4 0.0 1.734431 8893 9068 294-323 1.000000 73.5 trnG-GGA-trnR-AGA_p4 trnG-GGA-trnR-AGA 4 AAACCCTTAGCCTTCCAAGC TGGTATTGCGTCCAATAGGA 20 20 50.0 45.0 58.1 56.3 0.0 0.0 1.753606 8893 9068 282-311 1.000000 73.5 trnG-GGA-trnR-AGA_p5 trnG-GGA-trnR-AGA 5 AGCCTTCCAAGCTAACGATG TTGGTATTGCGTCCAATAGGA 20 21 50.0 42.9 58.0 57.1 0.0 0.0 1.946197 8893 9068 275-304 1.000000 72.0 trnR-AGA-atpA_p1 trnR-AGA-atpA 1 AGCCTTCCAAGCTAACGATG GGGTCGTGAAGCTTATCCAG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.088513 9141 9377 1208-1304 1.000000 86.0 trnR-AGA-atpA_p2 trnR-AGA-atpA 2 AGCCTTCCAAGCTAACGATG GGTCGTGAAGCTTATCCAGG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.088513 9141 9377 1207-1303 1.000000 86.0 trnR-AGA-atpA_p3 trnR-AGA-atpA 3 CGAAAGGCGTCCATTGTCTA GGGTCGTGAAGCTTATCCAG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.063258 9141 9377 994-1114 1.000000 84.7 trnR-AGA-atpA_p4 trnR-AGA-atpA 4 CGAAAGGCGTCCATTGTCTA GGTCGTGAAGCTTATCCAGG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.063258 9141 9377 993-1113 1.000000 84.7 trnR-AGA-atpA_p5 trnR-AGA-atpA 5 TTCTGTCAAAGCACCCAGAC GGTCGTGAAGCTTATCCAGG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.091356 9141 9377 1400-1446 0.500000 60.8 atpH-atpI_p1 atpH-atpI 1 AACCGAAGCAGCAGAAATCA TACAAGCGGGATTCAAGCTC 20 20 45.0 50.0 58.1 58.0 0.0 5.7 0.127956 12979 13451 582-601 1.000000 84.8 atpH-atpI_p2 atpH-atpI 2 GTCCAATAGAAGCAAGCCCA TACAAGCGGGATTCAAGCTC 20 20 50.0 50.0 57.9 58.0 0.0 5.7 0.152946 12979 13451 622-641 1.000000 84.2 atpH-atpI_p3 atpH-atpI 3 AACCGAAGCAGCAGAAATCA TTTTTGCCACTTTAGCTGCG 20 20 45.0 45.0 58.1 57.9 0.0 0.0 0.236520 12979 13451 559-578 1.000000 84.2 atpH-atpI_p4 atpH-atpI 4 GTCCAATAGAAGCAAGCCCA TTTTTGCCACTTTAGCTGCG 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.261511 12979 13451 599-618 1.000000 83.6 atpH-atpI_p5 atpH-atpI 5 AGGTCCAATAGAAGCAAGCC TACAAGCGGGATTCAAGCTC 20 20 50.0 50.0 57.6 58.0 0.0 5.7 0.451018 12979 13451 624-643 1.000000 81.8 psbM-trnD-GAC_p1 psbM-trnD-GAC 1 AGGAACGAGAATAAAGAGTGCA TTCAATTGGTCAGAGCACCG 22 20 40.9 50.0 57.5 58.5 0.0 5.4 3.014466 27838 28876 1133-1157 1.000000 64.9 psbM-trnD-GAC_p2 psbM-trnD-GAC 2 GGAACGAGAATAAAGAGTGCAG TTCAATTGGTCAGAGCACCG 22 20 45.5 50.0 57.2 58.5 0.0 5.4 3.326442 27838 28876 1132-1156 1.000000 62.4 psbM-trnD-GAC_p3 psbM-trnD-GAC 3 GGAACGAGAATAAAGAGTGCA TTCAATTGGTCAGAGCACCG 21 20 42.9 50.0 56.0 58.5 0.0 5.4 3.473883 27838 28876 1132-1156 1.000000 61.2 psbM-trnD-GAC_p4 psbM-trnD-GAC 4 CGAGAATAAAGAGTGCAGTAGC TTCAATTGGTCAGAGCACCG 22 20 45.5 50.0 57.0 58.5 0.0 5.4 3.503685 27838 28876 1128-1152 1.000000 61.0 psbM-trnD-GAC_p5 psbM-trnD-GAC 5 AGGAACGAGAATAAAGAGTGCA GTTCAATTGGTCAGAGCACC 22 20 40.9 50.0 57.5 57.0 0.0 5.4 3.534620 27838 28876 1134-1158 1.000000 60.7 trnT-ACA-trnL-UUA_p1 trnT-ACA-trnL-UUA 1 GCGATGCTCTAACCTCTGAG ATTAAGTCCGCAGCGTCTAC 20 20 55.0 50.0 57.9 57.8 0.0 15.0 0.338047 45073 45851 806-911 1.000000 87.0 trnT-ACA-trnL-UUA_p2 trnT-ACA-trnL-UUA 2 GGAATCGAACCGATGACCAT ATTAAGTCCGCAGCGTCTAC 20 20 50.0 50.0 57.8 57.8 15.5 15.0 0.445800 45073 45851 838-943 1.000000 85.9 trnT-ACA-trnL-UUA_p3 trnT-ACA-trnL-UUA 3 GCGATGCTCTAACCTCTGAG CGTCTACCAATTCCGCCATA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.652117 45073 45851 793-898 1.000000 84.6 trnT-ACA-trnL-UUA_p4 trnT-ACA-trnL-UUA 4 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 45073 45851 831-936 1.000000 84.4 trnT-ACA-trnL-UUA_p5 trnT-ACA-trnL-UUA 5 CTAACCTCTGAGCTAAGCGG ATTAAGTCCGCAGCGTCTAC 20 20 55.0 50.0 57.5 57.8 5.5 15.0 0.705816 45073 45851 798-903 1.000000 84.1 ndhC-trnV-GUA_p1 ndhC-trnV-GUA 1 GCCCAGAAAATATCATATTCGT GGTTCGAATCCGTATAGCCC 22 20 36.4 55.0 54.4 57.9 0.0 0.0 5.684147 48687 49422 793-872 1.000000 48.0 ndhC-trnV-GUA_p2 ndhC-trnV-GUA 2 GCCCAGAAAATATCATATTCGT CGGTTCGAATCCGTATAGCC 22 20 36.4 55.0 54.4 58.3 0.0 22.8 5.913528 48687 49422 794-873 1.000000 48.0 ndhC-trnV-GUA_p3 ndhC-trnV-GUA 3 GCCCAGAAAATATCATATTCGT CAGGTCTACGGTTCGAATCC 22 20 36.4 55.0 54.4 57.8 0.0 0.0 5.813474 48687 49422 802-881 1.000000 47.9 ndhC-trnV-GUA_p4 ndhC-trnV-GUA 4 GCCCAGAAAATATCATATTCGT GCAGGTCTACGGTTCGAATC 22 20 36.4 55.0 54.4 58.4 0.0 0.0 6.050516 48687 49422 803-882 1.000000 47.9 ndhC-trnV-GUA_p5 ndhC-trnV-GUA 5 GCCCAGAAAATATCATATTCGT AGCAGGTCTACGGTTCGAAT 22 20 36.4 50.0 54.4 58.8 0.0 0.0 6.424619 48687 49422 804-883 1.000000 47.9 petA-psbJ_p1 petA-psbJ 1 ATCCATTACGTGTCCAAGGC CTGGACGGATTCCTCTTTGG 20 20 50.0 55.0 58.0 58.0 0.0 0.3 0.068225 60646 61608 1098-1203 1.000000 86.9 petA-psbJ_p2 petA-psbJ 2 CATTACGTGTCCAAGGCCTT CTGGACGGATTCCTCTTTGG 20 20 50.0 55.0 58.2 58.0 13.8 0.3 0.208622 60646 61608 1095-1200 1.000000 85.8 petA-psbJ_p3 petA-psbJ 3 TTACGTGTCCAAGGCCTTTT CTGGACGGATTCCTCTTTGG 20 20 45.0 55.0 57.6 58.0 17.6 0.3 0.381544 60646 61608 1093-1198 1.000000 84.4 petA-psbJ_p4 petA-psbJ 4 TACGTGTCCAAGGCCTTTTG CTGGACGGATTCCTCTTTGG 20 20 50.0 55.0 58.4 58.0 17.6 0.3 0.429815 60646 61608 1092-1197 1.000000 84.1 petA-psbJ_p5 petA-psbJ 5 TGTCCAAGGCCTTTTGTTCT CTGGACGGATTCCTCTTTGG 20 20 45.0 55.0 57.5 58.0 17.6 0.3 0.482439 60646 61608 1088-1193 1.000000 83.7 trnW-UGG-trnP-CCA_p1 trnW-UGG-trnP-CCA 1 GTTTTGGAGACCCACGTTCT GTCACGGGTTCAAATCCTGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.144618 63842 64030 250-258 1.000000 87.0 trnW-UGG-trnP-CCA_p2 trnW-UGG-trnP-CCA 2 GTTTTGGAGACCCACGTTCT CACGGGTTCAAATCCTGTCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.145952 63842 64030 248-256 1.000000 87.0 trnW-UGG-trnP-CCA_p3 trnW-UGG-trnP-CCA 3 GTTTTGGAGACCCACGTTCT TGTCACGGGTTCAAATCCTG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.145952 63842 64030 251-259 1.000000 86.9 trnW-UGG-trnP-CCA_p4 trnW-UGG-trnP-CCA 4 GTTTTGGAGACCCACGTTCT GGGTACAAAATGTCACGGGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.136582 63842 64030 261-269 1.000000 86.8 trnW-UGG-trnP-CCA_p5 trnW-UGG-trnP-CCA 5 GTTTTGGAGACCCACGTTCT TGGGTACAAAATGTCACGGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.137926 63842 64030 262-270 1.000000 86.8 psaJ-rpl33_p1 psaJ-rpl33 1 ACCCGTGACATTTTGTACCC GGGGTGTTATGCCGATTCTT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.152537 64585 65011 1036-1101 1.000000 86.3 psaJ-rpl33_p2 psaJ-rpl33 2 CCCGTGACATTTTGTACCCA GGGGTGTTATGCCGATTCTT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.153880 64585 65011 1035-1100 1.000000 86.3 psaJ-rpl33_p3 psaJ-rpl33 3 ACCCGTGACATTTTGTACCC TCCAATCGACTAGGGGTGTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.152770 64585 65011 1048-1113 1.000000 86.2 psaJ-rpl33_p4 psaJ-rpl33 4 CCCGTGACATTTTGTACCCA TCCAATCGACTAGGGGTGTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.154114 64585 65011 1047-1112 1.000000 86.2 psaJ-rpl33_p5 psaJ-rpl33 5 ACCCGTGACATTTTGTACCC TTCCAATCGACTAGGGGTGT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.152770 64585 65011 1103-1114 0.500000 60.4 rpl16_p1 rpl16 1 ATCGGCGATTACTAGCTCCT GTATGGAGGGAATTGCACGT 20 20 50.0 50.0 58.1 58.0 18.1 0.0 0.125970 78573 79975 2223-2313 1.000000 86.8 rpl16_p2 rpl16 2 TAACGTCACCAATATGCGCA TGAACAGGCGAATACAAGGG 20 20 45.0 50.0 58.0 57.9 15.0 0.0 0.119490 78573 79975 1955-2045 0.750000 76.8 rpl16_p3 rpl16 3 TAACGTCACCAATATGCGCA GTATGGAGGGAATTGCACGT 20 20 45.0 50.0 58.0 58.0 15.0 0.0 0.049927 78573 79975 2244-2334 0.750000 76.7 rpl16_p4 rpl16 4 ACACATCAATTCTCGAGCCC GTATGGAGGGAATTGCACGT 20 20 50.0 50.0 58.0 58.0 7.8 0.0 0.068225 78573 79975 2192-2282 0.750000 76.7 rpl16_p5 rpl16 5 TAACGTCACCAATATGCGCA TGCACGTGTTGAATGGATCA 20 20 45.0 45.0 58.0 58.1 15.0 18.4 0.121995 78573 79975 1982-1982 0.250000 49.0 ndhF-rpl32_p1 ndhF-rpl32 1 TCCATGAATATTGATATGTATGTTCCA ACGAATACGCTTTTTCGAGA 27 20 29.6 40.0 56.7 55.5 0.0 19.5 10.706462 109922 110631 381-786 1.000000 50.3 ndhF-rpl32_p2 ndhF-rpl32 2 CCATGAATATTGATATGTATGTTCCA ACGAATACGCTTTTTCGAGA 26 20 30.8 40.0 55.5 55.5 0.0 19.5 10.945020 109922 110631 380-785 1.000000 50.3 ndhF-rpl32_p3 ndhF-rpl32 3 TCCATGAATATTGATATGTATGTTCCA ACGAATACGCTTTTTCGAGAT 27 21 29.6 38.1 56.7 56.1 0.0 19.5 11.150403 109922 110631 381-786 1.000000 50.3 ndhF-rpl32_p4 ndhF-rpl32 4 TCCATGAATATTGATATGTATGTTCC ACGAATACGCTTTTTCGAGA 26 20 30.8 40.0 55.3 55.5 0.0 19.5 11.174465 109922 110631 381-786 1.000000 50.3 ndhF-rpl32_p5 ndhF-rpl32 5 CCATGAATATTGATATGTATGTTCCA ACGAATACGCTTTTTCGAGAT 26 21 30.8 38.1 55.5 56.1 0.0 19.5 11.388961 109922 110631 380-785 1.000000 50.3 ndhE-ndhG_p1 ndhE-ndhG 1 TTCGACTCGTGATCAATCCA TTTCGGTGGCTCGTCAATAA 20 20 45.0 45.0 56.7 57.5 0.0 1.4 1.775971 115446 115719 333-381 1.000000 74.0 ndhE-ndhG_p2 ndhE-ndhG 2 TTCGACTCGTGATCAATCCA ATTTCGGTGGCTCGTCAATA 20 20 45.0 45.0 56.7 57.3 0.0 1.4 2.000912 115446 115719 334-382 1.000000 72.2 ndhE-ndhG_p3 ndhE-ndhG 3 TCGACTCGTGATCAATCCAT TTTCGGTGGCTCGTCAATAA 20 20 45.0 45.0 56.5 57.5 0.0 1.4 2.004375 115446 115719 332-380 1.000000 72.2 ndhE-ndhG_p4 ndhE-ndhG 4 TTTCGACTCGTGATCAATCCA TTTCGGTGGCTCGTCAATAA 21 20 42.9 45.0 57.4 57.5 0.0 1.4 2.045161 115446 115719 334-382 1.000000 71.8 ndhE-ndhG_p5 ndhE-ndhG 5 TCGACTCGTGATCAATCCAT ATTTCGGTGGCTCGTCAATA 20 20 45.0 45.0 56.5 57.3 0.0 1.4 2.229316 115446 115719 333-381 1.000000 70.4 ycf1_p1 ycf1 1 GTTTTACGCCTTTGGGAACG GGAAGAATTGGAAGCCGACT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.156057 124439 124558 240-240 0.500000 61.4 ycf1_p2 ycf1 2 GTTTTACGCCTTTGGGAACG TGGAAGAATTGGAAGCCGAC 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.219498 124439 124558 241-241 0.500000 60.9 ycf1_p3 ycf1 3 TCGGATAGTTGAACCCCAGT GGAAGAATTGGAAGCCGACT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.168358 124439 124558 663-663 0.500000 60.7 ycf1_p4 ycf1 4 GTTTTACGCCTTTGGGAACG GTCCCAATGGAACCCGAAAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.193386 124439 124558 209-209 0.500000 60.4 ycf1_p5 ycf1 5 TCGGATAGTTGAACCCCAGT GTCCCAATGGAACCCGAAAT 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.205687 124439 124558 632-632 0.500000 60.1